Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719350 | AES95624.2 | 84.167 | 240 | 16 | 4 | 1 | 229 | 1 | 229 | 1.19e-123 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719350 | sp|Q8S9H7|DIV_ANTMA | 41.007 | 139 | 68 | 5 | 31 | 159 | 66 | 200 | 2.21e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719350 | G7K884 | 84.167 | 240 | 16 | 4 | 1 | 229 | 1 | 229 | 5.70e-124 | 360 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0719350 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719350 | MtrunA17_Chr5g0409831 | 84.167 | 240 | 16 | 4 | 1 | 229 | 1 | 229 | 1.10e-127 | 360 |
| Msa0719350 | MtrunA17_Chr5g0409841 | 64.463 | 242 | 62 | 7 | 1 | 229 | 1 | 231 | 8.96e-99 | 287 |
| Msa0719350 | MtrunA17_Chr5g0440731 | 52.837 | 282 | 76 | 7 | 1 | 229 | 17 | 294 | 2.99e-86 | 257 |
| Msa0719350 | MtrunA17_Chr5g0440741 | 52.128 | 282 | 73 | 8 | 1 | 229 | 17 | 289 | 1.98e-81 | 245 |
| Msa0719350 | MtrunA17_Chr7g0241761 | 56.579 | 76 | 30 | 1 | 84 | 159 | 136 | 208 | 1.23e-22 | 93.6 |
| Msa0719350 | MtrunA17_Chr1g0210471 | 33.146 | 178 | 102 | 6 | 34 | 200 | 67 | 238 | 1.78e-22 | 92.0 |
| Msa0719350 | MtrunA17_Chr3g0104071 | 43.165 | 139 | 66 | 6 | 29 | 159 | 82 | 215 | 1.95e-22 | 93.2 |
| Msa0719350 | MtrunA17_Chr1g0162081 | 37.500 | 160 | 79 | 7 | 23 | 165 | 41 | 196 | 2.47e-22 | 92.8 |
| Msa0719350 | MtrunA17_Chr5g0429521 | 57.895 | 76 | 29 | 1 | 84 | 159 | 128 | 200 | 9.51e-22 | 91.3 |
| Msa0719350 | MtrunA17_Chr5g0436501 | 50.538 | 93 | 41 | 2 | 64 | 156 | 105 | 192 | 3.82e-21 | 89.0 |
| Msa0719350 | MtrunA17_Chr2g0331031 | 39.252 | 107 | 62 | 1 | 84 | 190 | 105 | 208 | 1.31e-20 | 88.6 |
| Msa0719350 | MtrunA17_Chr4g0062741 | 47.561 | 82 | 40 | 1 | 84 | 165 | 134 | 212 | 8.71e-20 | 85.9 |
| Msa0719350 | MtrunA17_Chr6g0488471 | 52.778 | 72 | 31 | 1 | 84 | 155 | 93 | 161 | 2.22e-19 | 84.3 |
| Msa0719350 | MtrunA17_Chr4g0059701 | 31.737 | 167 | 86 | 5 | 6 | 171 | 22 | 161 | 2.64e-19 | 84.3 |
| Msa0719350 | MtrunA17_Chr4g0055931 | 40.217 | 92 | 52 | 1 | 76 | 167 | 83 | 171 | 1.22e-18 | 82.8 |
| Msa0719350 | MtrunA17_Chr8g0389241 | 52.778 | 72 | 30 | 1 | 84 | 155 | 101 | 168 | 2.84e-18 | 81.3 |
| Msa0719350 | MtrunA17_Chr3g0135671 | 45.946 | 74 | 40 | 0 | 82 | 155 | 85 | 158 | 1.32e-17 | 78.6 |
| Msa0719350 | MtrunA17_Chr5g0415191 | 42.609 | 115 | 53 | 4 | 50 | 164 | 71 | 172 | 1.47e-17 | 79.7 |
| Msa0719350 | MtrunA17_Chr8g0365011 | 37.778 | 135 | 56 | 5 | 41 | 163 | 60 | 178 | 2.47e-17 | 79.0 |
| Msa0719350 | MtrunA17_Chr5g0432921 | 35.417 | 144 | 81 | 5 | 37 | 180 | 69 | 200 | 3.11e-17 | 77.4 |
| Msa0719350 | MtrunA17_Chr3g0092621 | 37.113 | 97 | 55 | 2 | 83 | 179 | 79 | 169 | 3.14e-16 | 73.6 |
| Msa0719350 | MtrunA17_Chr8g0364731 | 50.000 | 66 | 32 | 1 | 98 | 163 | 11 | 75 | 4.09e-16 | 73.6 |
| Msa0719350 | MtrunA17_Chr5g0432941 | 32.061 | 131 | 80 | 3 | 54 | 180 | 75 | 200 | 7.95e-16 | 73.6 |
| Msa0719350 | MtrunA17_Chr5g0409951 | 42.857 | 112 | 54 | 3 | 4 | 114 | 28 | 130 | 1.30e-15 | 73.6 |
| Msa0719350 | MtrunA17_Chr1g0192061 | 43.590 | 78 | 43 | 1 | 85 | 162 | 58 | 134 | 4.54e-15 | 70.9 |
| Msa0719350 | MtrunA17_Chr3g0113121 | 48.611 | 72 | 33 | 1 | 89 | 156 | 96 | 167 | 1.46e-14 | 70.1 |
| Msa0719350 | MtrunA17_Chr6g0452791 | 39.241 | 79 | 35 | 1 | 88 | 166 | 80 | 145 | 8.45e-13 | 64.3 |
| Msa0719350 | MtrunA17_Chr8g0370121 | 38.235 | 68 | 41 | 1 | 83 | 150 | 95 | 161 | 6.90e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719350 | AT5G23650.1 | 38.547 | 179 | 90 | 6 | 37 | 205 | 61 | 229 | 3.18e-23 | 96.3 |
| Msa0719350 | AT2G38090.1 | 39.726 | 146 | 66 | 6 | 31 | 159 | 69 | 209 | 3.48e-23 | 95.5 |
| Msa0719350 | AT5G08520.1 | 37.179 | 156 | 81 | 4 | 23 | 165 | 41 | 192 | 5.14e-23 | 94.7 |
| Msa0719350 | AT5G58900.1 | 57.895 | 76 | 29 | 1 | 84 | 159 | 137 | 209 | 1.00e-22 | 94.0 |
| Msa0719350 | AT5G01200.1 | 38.514 | 148 | 68 | 5 | 31 | 159 | 71 | 214 | 3.20e-22 | 92.0 |
| Msa0719350 | AT3G11280.2 | 39.695 | 131 | 69 | 4 | 31 | 159 | 73 | 195 | 8.66e-22 | 90.9 |
| Msa0719350 | AT3G11280.1 | 39.695 | 131 | 69 | 4 | 31 | 159 | 73 | 195 | 8.66e-22 | 90.9 |
| Msa0719350 | AT5G04760.1 | 48.913 | 92 | 42 | 2 | 76 | 167 | 87 | 173 | 2.85e-21 | 88.6 |
| Msa0719350 | AT5G05790.2 | 38.346 | 133 | 74 | 4 | 31 | 159 | 71 | 199 | 1.02e-20 | 88.2 |
| Msa0719350 | AT5G05790.1 | 38.346 | 133 | 74 | 4 | 31 | 159 | 71 | 199 | 1.02e-20 | 88.2 |
| Msa0719350 | AT3G10580.2 | 36.364 | 132 | 66 | 4 | 37 | 168 | 56 | 169 | 1.26e-20 | 87.8 |
| Msa0719350 | AT3G10580.1 | 36.364 | 132 | 66 | 4 | 37 | 168 | 56 | 169 | 2.42e-20 | 87.4 |
| Msa0719350 | AT1G49010.1 | 47.126 | 87 | 42 | 2 | 80 | 165 | 126 | 209 | 9.09e-20 | 86.3 |
| Msa0719350 | AT5G61620.1 | 49.383 | 81 | 34 | 2 | 77 | 157 | 101 | 174 | 4.02e-19 | 84.7 |
| Msa0719350 | AT1G19000.2 | 41.739 | 115 | 58 | 3 | 83 | 197 | 97 | 202 | 6.60e-19 | 83.6 |
| Msa0719350 | AT1G19000.1 | 41.739 | 115 | 58 | 3 | 83 | 197 | 97 | 202 | 6.60e-19 | 83.6 |
| Msa0719350 | AT5G47390.1 | 36.066 | 122 | 65 | 3 | 50 | 171 | 65 | 173 | 2.70e-18 | 82.8 |
| Msa0719350 | AT5G56840.1 | 48.052 | 77 | 38 | 1 | 84 | 160 | 87 | 161 | 8.13e-18 | 79.7 |
| Msa0719350 | AT1G74840.2 | 56.250 | 64 | 28 | 0 | 71 | 134 | 79 | 142 | 8.45e-18 | 79.7 |
| Msa0719350 | AT1G74840.1 | 56.250 | 64 | 28 | 0 | 71 | 134 | 79 | 142 | 9.83e-18 | 80.1 |
| Msa0719350 | AT4G09450.1 | 36.885 | 122 | 60 | 3 | 37 | 158 | 54 | 158 | 3.04e-17 | 77.4 |
| Msa0719350 | AT3G10590.1 | 46.078 | 102 | 48 | 3 | 62 | 161 | 84 | 180 | 1.12e-16 | 75.9 |
| Msa0719350 | AT1G70000.1 | 42.553 | 94 | 49 | 2 | 82 | 175 | 92 | 180 | 2.38e-16 | 76.3 |
| Msa0719350 | AT1G70000.2 | 42.553 | 94 | 49 | 2 | 82 | 175 | 92 | 180 | 2.38e-16 | 76.3 |
| Msa0719350 | AT3G16350.1 | 43.023 | 86 | 49 | 0 | 50 | 135 | 99 | 184 | 3.48e-16 | 77.0 |
Find 42 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGTGTCATTGTTGTTTA+AGG | 0.102533 | 5_1:-14428209 | None:intergenic |
| GTCATTGTCCTTGTTATTTA+AGG | 0.115096 | 5_1:-14428284 | None:intergenic |
| TTTCTTCTTCTCTATTTCTT+TGG | 0.241888 | 5_1:-14428161 | None:intergenic |
| TCTCTATTTCTTTGGCAGTT+TGG | 0.295652 | 5_1:-14428153 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5_1:-14428370 | None:intergenic |
| TTTGCTTCATGACTTCCTTC+TGG | 0.307695 | 5_1:-14426425 | None:intergenic |
| TGTCAAGTTTCTCTTGTTGT+TGG | 0.325112 | 5_1:-14426295 | None:intergenic |
| GCGCAACTTGTTTAACTTGT+TGG | 0.342312 | 5_1:+14428396 | Msa0719350:CDS |
| TGTTGGTCCATGCTATTCTC+AGG | 0.370831 | 5_1:-14426278 | None:intergenic |
| GATATGTAGGTCGTTTCTAC+AGG | 0.371977 | 5_1:+14428021 | Msa0719350:intron |
| ATGTTATCATCATTAGAGTT+TGG | 0.374150 | 5_1:-14426353 | None:intergenic |
| AGGCCAACTGATACATTTGT+TGG | 0.437602 | 5_1:-14428321 | None:intergenic |
| CTATTTCTTTGGCAGTTTGG+TGG | 0.446999 | 5_1:-14428150 | None:intergenic |
| TTGGCCTTGCTTTATCCAAT+CGG | 0.464369 | 5_1:+14428337 | Msa0719350:CDS |
| GACACTGATGTCGTTGAGTC+GGG | 0.467326 | 5_1:+14426314 | Msa0719350:CDS |
| GGCCAACTGATACATTTGTT+GGG | 0.476834 | 5_1:-14428320 | None:intergenic |
| GCATGACTAGCAATTTGAGT+TGG | 0.487768 | 5_1:-14428109 | None:intergenic |
| GTTGGTCCATGCTATTCTCA+GGG | 0.498294 | 5_1:-14426277 | None:intergenic |
| AAAGAGAGGGCGTAAGGAAA+GGG | 0.530997 | 5_1:+14426445 | Msa0719350:CDS |
| CAAAGAGAGGGCGTAAGGAA+AGG | 0.532803 | 5_1:+14426444 | Msa0719350:CDS |
| TCAGGAAGTGCAGTACCGAT+TGG | 0.538889 | 5_1:-14428352 | None:intergenic |
| ATATGTAGGTCGTTTCTACA+GGG | 0.546671 | 5_1:+14428022 | Msa0719350:intron |
| TGACACTGATGTCGTTGAGT+CGG | 0.546703 | 5_1:+14426313 | Msa0719350:CDS |
| TTTAAGGTAGCTGTGTCTTG+AGG | 0.565081 | 5_1:-14428268 | None:intergenic |
| TGAAGCAAAGAGAGGGCGTA+AGG | 0.567823 | 5_1:+14426439 | Msa0719350:CDS |
| CACAGCTACCTTAAATAACA+AGG | 0.577999 | 5_1:+14428276 | Msa0719350:CDS |
| AACCCAACAAATGTATCAGT+TGG | 0.579773 | 5_1:+14428318 | Msa0719350:CDS |
| GGCGTAAGGAAAGGGTACAT+TGG | 0.585151 | 5_1:+14426453 | Msa0719350:CDS |
| AAGGTAGCTGTGTCTTGAGG+AGG | 0.587982 | 5_1:-14428265 | None:intergenic |
| TAAGGAAAGGGTACATTGGA+CGG | 0.593107 | 5_1:+14426457 | Msa0719350:CDS |
| GAAAGGGTACATTGGACGGA+AGG | 0.614122 | 5_1:+14426461 | Msa0719350:CDS |
| TTGGTCCATGCTATTCTCAG+GGG | 0.618470 | 5_1:-14426276 | None:intergenic |
| TGGTCCATGCTATTCTCAGG+GGG | 0.624422 | 5_1:-14426275 | None:intergenic |
| ATTAGAGTTTGGAATTGCGA+CGG | 0.624770 | 5_1:-14426342 | None:intergenic |
| ATCATATTGATCTAAATGAG+AGG | 0.625540 | 5_1:+14426237 | Msa0719350:CDS |
| GAAGTCATGAAGCAAAGAGA+GGG | 0.628581 | 5_1:+14426432 | Msa0719350:CDS |
| GGAAGTCATGAAGCAAAGAG+AGG | 0.629765 | 5_1:+14426431 | Msa0719350:CDS |
| CAAGCTGAGTCAGTACCAGA+AGG | 0.630435 | 5_1:+14426410 | Msa0719350:CDS |
| ATGTAGGTCGTTTCTACAGG+GGG | 0.657825 | 5_1:+14428024 | Msa0719350:intron |
| TCATTTAGATCAATATGATG+AGG | 0.665709 | 5_1:-14426233 | None:intergenic |
| AGTACCGATTGGATAAAGCA+AGG | 0.686649 | 5_1:-14428341 | None:intergenic |
| TATGTAGGTCGTTTCTACAG+GGG | 0.695640 | 5_1:+14428023 | Msa0719350:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATTATAATTCTATTT+AGG | + | chr5_1:14426520-14426539 | Msa0719350:intron | 10.0% |
| !! | ATACATTATAATTCTATTTA+GGG | + | chr5_1:14426521-14426540 | Msa0719350:intron | 10.0% |
| !!! | TTGAAATTTTATAAAATTTG+TGG | + | chr5_1:14426593-14426612 | Msa0719350:intron | 10.0% |
| !!! | TGAAATTTTATAAAATTTGT+GGG | + | chr5_1:14426594-14426613 | Msa0719350:intron | 10.0% |
| !! | TATTTATTATATTCTCTATT+TGG | + | chr5_1:14426700-14426719 | Msa0719350:intron | 10.0% |
| !!! | ATATTGATAATATTAATTAG+TGG | + | chr5_1:14427144-14427163 | Msa0719350:intron | 10.0% |
| !!! | AAATATATTTTTGTTCATAT+AGG | + | chr5_1:14427852-14427871 | Msa0719350:intron | 10.0% |
| !! | TATACATTATAATTCTATTT+AGG | + | chr5_1:14426520-14426539 | Msa0719350:intron | 10.0% |
| !! | ATACATTATAATTCTATTTA+GGG | + | chr5_1:14426521-14426540 | Msa0719350:intron | 10.0% |
| !!! | TTGAAATTTTATAAAATTTG+TGG | + | chr5_1:14426593-14426612 | Msa0719350:intron | 10.0% |
| !!! | TGAAATTTTATAAAATTTGT+GGG | + | chr5_1:14426594-14426613 | Msa0719350:intron | 10.0% |
| !! | TATTTATTATATTCTCTATT+TGG | + | chr5_1:14426700-14426719 | Msa0719350:intron | 10.0% |
| !!! | ATATTGATAATATTAATTAG+TGG | + | chr5_1:14427144-14427163 | Msa0719350:intron | 10.0% |
| !!! | AAATATATTTTTGTTCATAT+AGG | + | chr5_1:14427852-14427871 | Msa0719350:intron | 10.0% |
| !! | ATTATAATGTATATATTCCA+AGG | - | chr5_1:14426513-14426532 | None:intergenic | 15.0% |
| !!! | GAAATTTTATAAAATTTGTG+GGG | + | chr5_1:14426595-14426614 | Msa0719350:intron | 15.0% |
| !! | TAAATATCTCTATAGATAAA+AGG | - | chr5_1:14427099-14427118 | None:intergenic | 15.0% |
| !!! | ATAAATAAGGGTATAATAAT+GGG | - | chr5_1:14427666-14427685 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr5_1:14427667-14427686 | None:intergenic | 15.0% |
| !! | AAAATGAAGTAACTATATAT+TGG | - | chr5_1:14427966-14427985 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGTGATATGT+AGG | + | chr5_1:14428008-14428027 | Msa0719350:intron | 15.0% |
| !! | ATTATAATGTATATATTCCA+AGG | - | chr5_1:14426513-14426532 | None:intergenic | 15.0% |
| !!! | GAAATTTTATAAAATTTGTG+GGG | + | chr5_1:14426595-14426614 | Msa0719350:intron | 15.0% |
| !! | TAAATATCTCTATAGATAAA+AGG | - | chr5_1:14427099-14427118 | None:intergenic | 15.0% |
| !!! | ATAAATAAGGGTATAATAAT+GGG | - | chr5_1:14427666-14427685 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr5_1:14427667-14427686 | None:intergenic | 15.0% |
| !! | AAAATGAAGTAACTATATAT+TGG | - | chr5_1:14427966-14427985 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGTGATATGT+AGG | + | chr5_1:14428008-14428027 | Msa0719350:intron | 15.0% |
| !! | TGTAGATTATTCCTATAAAA+GGG | - | chr5_1:14427004-14427023 | None:intergenic | 20.0% |
| !! | TTGTAGATTATTCCTATAAA+AGG | - | chr5_1:14427005-14427024 | None:intergenic | 20.0% |
| !! | TCTATAGATAAAAGGTAATT+GGG | - | chr5_1:14427091-14427110 | None:intergenic | 20.0% |
| !! | AATTTGTAGATAGTGTATTT+AGG | + | chr5_1:14427239-14427258 | Msa0719350:intron | 20.0% |
| !! | TCTAAATACTACAAAAAATG+TGG | - | chr5_1:14427389-14427408 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | - | chr5_1:14427642-14427661 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr5_1:14427678-14427697 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr5_1:14427679-14427698 | None:intergenic | 20.0% |
| !! | TGTAGATTATTCCTATAAAA+GGG | - | chr5_1:14427004-14427023 | None:intergenic | 20.0% |
| !! | TTGTAGATTATTCCTATAAA+AGG | - | chr5_1:14427005-14427024 | None:intergenic | 20.0% |
| !! | TCTATAGATAAAAGGTAATT+GGG | - | chr5_1:14427091-14427110 | None:intergenic | 20.0% |
| !! | AATTTGTAGATAGTGTATTT+AGG | + | chr5_1:14427239-14427258 | Msa0719350:intron | 20.0% |
| !! | TCTAAATACTACAAAAAATG+TGG | - | chr5_1:14427389-14427408 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | - | chr5_1:14427642-14427661 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr5_1:14427678-14427697 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr5_1:14427679-14427698 | None:intergenic | 20.0% |
| ! | TCATTTAGATCAATATGATG+AGG | - | chr5_1:14426236-14426255 | None:intergenic | 25.0% |
| ! | ATCATATTGATCTAAATGAG+AGG | + | chr5_1:14426237-14426256 | Msa0719350:CDS | 25.0% |
| ! | ATGTTATCATCATTAGAGTT+TGG | - | chr5_1:14426356-14426375 | None:intergenic | 25.0% |
| ! | GCAAATTTAATCTTAGAGTA+AGG | + | chr5_1:14426826-14426845 | Msa0719350:intron | 25.0% |
| ! | CTCTATAGATAAAAGGTAAT+TGG | - | chr5_1:14427092-14427111 | None:intergenic | 25.0% |
| ! | TGCAAAGTAGACTTATAAAA+AGG | + | chr5_1:14427281-14427300 | Msa0719350:intron | 25.0% |
| ! | GCAAAGTAGACTTATAAAAA+GGG | + | chr5_1:14427282-14427301 | Msa0719350:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr5_1:14427709-14427728 | Msa0719350:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr5_1:14427710-14427729 | Msa0719350:intron | 25.0% |
| !!! | ATTGATTGTGTTGATTTCAA+TGG | - | chr5_1:14427762-14427781 | None:intergenic | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | - | chr5_1:14427810-14427829 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | + | chr5_1:14427811-14427830 | Msa0719350:intron | 25.0% |
| !! | TTTCTTCTTCTCTATTTCTT+TGG | - | chr5_1:14428164-14428183 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTGTTTTTCAAGA+GGG | - | chr5_1:14428243-14428262 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTGTTTTTCAAG+AGG | - | chr5_1:14428244-14428263 | None:intergenic | 25.0% |
| ! | TCATTTAGATCAATATGATG+AGG | - | chr5_1:14426236-14426255 | None:intergenic | 25.0% |
| ! | ATCATATTGATCTAAATGAG+AGG | + | chr5_1:14426237-14426256 | Msa0719350:CDS | 25.0% |
| ! | ATGTTATCATCATTAGAGTT+TGG | - | chr5_1:14426356-14426375 | None:intergenic | 25.0% |
| ! | GCAAATTTAATCTTAGAGTA+AGG | + | chr5_1:14426826-14426845 | Msa0719350:intron | 25.0% |
| ! | CTCTATAGATAAAAGGTAAT+TGG | - | chr5_1:14427092-14427111 | None:intergenic | 25.0% |
| ! | TGCAAAGTAGACTTATAAAA+AGG | + | chr5_1:14427281-14427300 | Msa0719350:intron | 25.0% |
| ! | GCAAAGTAGACTTATAAAAA+GGG | + | chr5_1:14427282-14427301 | Msa0719350:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr5_1:14427709-14427728 | Msa0719350:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr5_1:14427710-14427729 | Msa0719350:intron | 25.0% |
| !!! | ATTGATTGTGTTGATTTCAA+TGG | - | chr5_1:14427762-14427781 | None:intergenic | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | - | chr5_1:14427810-14427829 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | + | chr5_1:14427811-14427830 | Msa0719350:intron | 25.0% |
| !! | TTTCTTCTTCTCTATTTCTT+TGG | - | chr5_1:14428164-14428183 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTGTTTTTCAAGA+GGG | - | chr5_1:14428243-14428262 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTGTTTTTCAAG+AGG | - | chr5_1:14428244-14428263 | None:intergenic | 25.0% |
| GTAAGTATTCAATCTATCCT+TGG | + | chr5_1:14426493-14426512 | Msa0719350:intron | 30.0% | |
| AACAAACAGATACAAAGACT+GGG | - | chr5_1:14426678-14426697 | None:intergenic | 30.0% | |
| AAACAAACAGATACAAAGAC+TGG | - | chr5_1:14426679-14426698 | None:intergenic | 30.0% | |
| !!! | TGAGTATCAATTTTGGAGTA+AGG | - | chr5_1:14426975-14426994 | None:intergenic | 30.0% |
| GGAATAATCTACAAAAATCG+AGG | + | chr5_1:14427011-14427030 | Msa0719350:intron | 30.0% | |
| AGTAGACTTATAAAAAGGGA+CGG | + | chr5_1:14427286-14427305 | Msa0719350:intron | 30.0% | |
| ATTAGCTATGTGATGACAAT+TGG | - | chr5_1:14427460-14427479 | None:intergenic | 30.0% | |
| AAGAGACTATTATTGTGAGA+CGG | - | chr5_1:14427576-14427595 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr5_1:14427713-14427732 | None:intergenic | 30.0% | |
| TTGAATATCAGTAAAGTCAG+AGG | + | chr5_1:14427895-14427914 | Msa0719350:intron | 30.0% | |
| !! | TACTGTGTCATTGTTGTTTA+AGG | - | chr5_1:14428212-14428231 | None:intergenic | 30.0% |
| !! | GTCATTGTCCTTGTTATTTA+AGG | - | chr5_1:14428287-14428306 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | - | chr5_1:14428373-14428392 | None:intergenic | 30.0% |
| GTAAGTATTCAATCTATCCT+TGG | + | chr5_1:14426493-14426512 | Msa0719350:intron | 30.0% | |
| AACAAACAGATACAAAGACT+GGG | - | chr5_1:14426678-14426697 | None:intergenic | 30.0% | |
| AAACAAACAGATACAAAGAC+TGG | - | chr5_1:14426679-14426698 | None:intergenic | 30.0% | |
| !!! | TGAGTATCAATTTTGGAGTA+AGG | - | chr5_1:14426975-14426994 | None:intergenic | 30.0% |
| GGAATAATCTACAAAAATCG+AGG | + | chr5_1:14427011-14427030 | Msa0719350:intron | 30.0% | |
| AGTAGACTTATAAAAAGGGA+CGG | + | chr5_1:14427286-14427305 | Msa0719350:intron | 30.0% | |
| ATTAGCTATGTGATGACAAT+TGG | - | chr5_1:14427460-14427479 | None:intergenic | 30.0% | |
| AAGAGACTATTATTGTGAGA+CGG | - | chr5_1:14427576-14427595 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr5_1:14427713-14427732 | None:intergenic | 30.0% | |
| TTGAATATCAGTAAAGTCAG+AGG | + | chr5_1:14427895-14427914 | Msa0719350:intron | 30.0% | |
| !! | TACTGTGTCATTGTTGTTTA+AGG | - | chr5_1:14428212-14428231 | None:intergenic | 30.0% |
| !! | GTCATTGTCCTTGTTATTTA+AGG | - | chr5_1:14428287-14428306 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | - | chr5_1:14428373-14428392 | None:intergenic | 30.0% |
| ! | TGTCAAGTTTCTCTTGTTGT+TGG | - | chr5_1:14426298-14426317 | None:intergenic | 35.0% |
| ! | ATTAGAGTTTGGAATTGCGA+CGG | - | chr5_1:14426345-14426364 | None:intergenic | 35.0% |
| TATATACTCGTATACCCGTT+TGG | + | chr5_1:14426624-14426643 | Msa0719350:intron | 35.0% | |
| ATATACTCGTATACCCGTTT+GGG | + | chr5_1:14426625-14426644 | Msa0719350:intron | 35.0% | |
| ! | ACTTTTCTCCGAATAGAGTA+GGG | + | chr5_1:14426851-14426870 | Msa0719350:intron | 35.0% |
| CTCATCTTCACTCTATACTA+AGG | + | chr5_1:14426940-14426959 | Msa0719350:intron | 35.0% | |
| ! | GACAGAGTGAGTATCAATTT+TGG | - | chr5_1:14426982-14427001 | None:intergenic | 35.0% |
| ACATGTGTCTAGGTTTAGAT+TGG | - | chr5_1:14427518-14427537 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr5_1:14427699-14427718 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | + | chr5_1:14427815-14427834 | Msa0719350:intron | 35.0% | |
| ! | TGCAAGTGTTTGCATTGTTT+TGG | + | chr5_1:14427931-14427950 | Msa0719350:intron | 35.0% |
| ! | GCAAGTGTTTGCATTGTTTT+GGG | + | chr5_1:14427932-14427951 | Msa0719350:intron | 35.0% |
| ATATGTAGGTCGTTTCTACA+GGG | + | chr5_1:14428022-14428041 | Msa0719350:intron | 35.0% | |
| ! | TCTCTATTTCTTTGGCAGTT+TGG | - | chr5_1:14428156-14428175 | None:intergenic | 35.0% |
| CACAGCTACCTTAAATAACA+AGG | + | chr5_1:14428276-14428295 | Msa0719350:CDS | 35.0% | |
| AACCCAACAAATGTATCAGT+TGG | + | chr5_1:14428318-14428337 | Msa0719350:CDS | 35.0% | |
| ! | TGTCAAGTTTCTCTTGTTGT+TGG | - | chr5_1:14426298-14426317 | None:intergenic | 35.0% |
| ! | ATTAGAGTTTGGAATTGCGA+CGG | - | chr5_1:14426345-14426364 | None:intergenic | 35.0% |
| TATATACTCGTATACCCGTT+TGG | + | chr5_1:14426624-14426643 | Msa0719350:intron | 35.0% | |
| ATATACTCGTATACCCGTTT+GGG | + | chr5_1:14426625-14426644 | Msa0719350:intron | 35.0% | |
| ! | ACTTTTCTCCGAATAGAGTA+GGG | + | chr5_1:14426851-14426870 | Msa0719350:intron | 35.0% |
| CTCATCTTCACTCTATACTA+AGG | + | chr5_1:14426940-14426959 | Msa0719350:intron | 35.0% | |
| ! | GACAGAGTGAGTATCAATTT+TGG | - | chr5_1:14426982-14427001 | None:intergenic | 35.0% |
| ACATGTGTCTAGGTTTAGAT+TGG | - | chr5_1:14427518-14427537 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr5_1:14427699-14427718 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | + | chr5_1:14427815-14427834 | Msa0719350:intron | 35.0% | |
| ! | TGCAAGTGTTTGCATTGTTT+TGG | + | chr5_1:14427931-14427950 | Msa0719350:intron | 35.0% |
| ! | GCAAGTGTTTGCATTGTTTT+GGG | + | chr5_1:14427932-14427951 | Msa0719350:intron | 35.0% |
| ATATGTAGGTCGTTTCTACA+GGG | + | chr5_1:14428022-14428041 | Msa0719350:intron | 35.0% | |
| ! | TCTCTATTTCTTTGGCAGTT+TGG | - | chr5_1:14428156-14428175 | None:intergenic | 35.0% |
| CACAGCTACCTTAAATAACA+AGG | + | chr5_1:14428276-14428295 | Msa0719350:CDS | 35.0% | |
| AACCCAACAAATGTATCAGT+TGG | + | chr5_1:14428318-14428337 | Msa0719350:CDS | 35.0% | |
| TTTGCTTCATGACTTCCTTC+TGG | - | chr5_1:14426428-14426447 | None:intergenic | 40.0% | |
| GAAGTCATGAAGCAAAGAGA+GGG | + | chr5_1:14426432-14426451 | Msa0719350:CDS | 40.0% | |
| ! | TAAGGAAAGGGTACATTGGA+CGG | + | chr5_1:14426457-14426476 | Msa0719350:CDS | 40.0% |
| AAACAGATACAAAGACTGGG+AGG | - | chr5_1:14426675-14426694 | None:intergenic | 40.0% | |
| ! | GACTTTTCTCCGAATAGAGT+AGG | + | chr5_1:14426850-14426869 | Msa0719350:intron | 40.0% |
| CAACTCATCCCTACTCTATT+CGG | - | chr5_1:14426862-14426881 | None:intergenic | 40.0% | |
| ! | ACTCACTCTGTCCCTTTTAT+AGG | + | chr5_1:14426990-14427009 | Msa0719350:intron | 40.0% |
| AGACTTATAAAAAGGGACGG+AGG | + | chr5_1:14427289-14427308 | Msa0719350:intron | 40.0% | |
| AGCTAATGACTAGACACTCA+AGG | + | chr5_1:14427473-14427492 | Msa0719350:intron | 40.0% | |
| GCTAATGACTAGACACTCAA+GGG | + | chr5_1:14427474-14427493 | Msa0719350:intron | 40.0% | |
| CCTAGACACATGTAGAACAA+CGG | + | chr5_1:14427525-14427544 | Msa0719350:intron | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | - | chr5_1:14427572-14427591 | None:intergenic | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | - | chr5_1:14427573-14427592 | None:intergenic | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | - | chr5_1:14427790-14427809 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | - | chr5_1:14427799-14427818 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | + | chr5_1:14427814-14427833 | Msa0719350:intron | 40.0% | |
| GATATGTAGGTCGTTTCTAC+AGG | + | chr5_1:14428021-14428040 | Msa0719350:intron | 40.0% | |
| TATGTAGGTCGTTTCTACAG+GGG | + | chr5_1:14428023-14428042 | Msa0719350:intron | 40.0% | |
| GCATGACTAGCAATTTGAGT+TGG | - | chr5_1:14428112-14428131 | None:intergenic | 40.0% | |
| ! | CTATTTCTTTGGCAGTTTGG+TGG | - | chr5_1:14428153-14428172 | None:intergenic | 40.0% |
| ! | TTTAAGGTAGCTGTGTCTTG+AGG | - | chr5_1:14428271-14428290 | None:intergenic | 40.0% |
| GGCCAACTGATACATTTGTT+GGG | - | chr5_1:14428323-14428342 | None:intergenic | 40.0% | |
| AGGCCAACTGATACATTTGT+TGG | - | chr5_1:14428324-14428343 | None:intergenic | 40.0% | |
| !! | TTGGCCTTGCTTTATCCAAT+CGG | + | chr5_1:14428337-14428356 | Msa0719350:CDS | 40.0% |
| !! | AGTACCGATTGGATAAAGCA+AGG | - | chr5_1:14428344-14428363 | None:intergenic | 40.0% |
| !! | GCGCAACTTGTTTAACTTGT+TGG | + | chr5_1:14428396-14428415 | Msa0719350:CDS | 40.0% |
| TTTGCTTCATGACTTCCTTC+TGG | - | chr5_1:14426428-14426447 | None:intergenic | 40.0% | |
| GAAGTCATGAAGCAAAGAGA+GGG | + | chr5_1:14426432-14426451 | Msa0719350:CDS | 40.0% | |
| ! | TAAGGAAAGGGTACATTGGA+CGG | + | chr5_1:14426457-14426476 | Msa0719350:CDS | 40.0% |
| AAACAGATACAAAGACTGGG+AGG | - | chr5_1:14426675-14426694 | None:intergenic | 40.0% | |
| ! | GACTTTTCTCCGAATAGAGT+AGG | + | chr5_1:14426850-14426869 | Msa0719350:intron | 40.0% |
| CAACTCATCCCTACTCTATT+CGG | - | chr5_1:14426862-14426881 | None:intergenic | 40.0% | |
| ! | ACTCACTCTGTCCCTTTTAT+AGG | + | chr5_1:14426990-14427009 | Msa0719350:intron | 40.0% |
| AGACTTATAAAAAGGGACGG+AGG | + | chr5_1:14427289-14427308 | Msa0719350:intron | 40.0% | |
| AGCTAATGACTAGACACTCA+AGG | + | chr5_1:14427473-14427492 | Msa0719350:intron | 40.0% | |
| GCTAATGACTAGACACTCAA+GGG | + | chr5_1:14427474-14427493 | Msa0719350:intron | 40.0% | |
| CCTAGACACATGTAGAACAA+CGG | + | chr5_1:14427525-14427544 | Msa0719350:intron | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | - | chr5_1:14427572-14427591 | None:intergenic | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | - | chr5_1:14427573-14427592 | None:intergenic | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | - | chr5_1:14427790-14427809 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | - | chr5_1:14427799-14427818 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | + | chr5_1:14427814-14427833 | Msa0719350:intron | 40.0% | |
| GATATGTAGGTCGTTTCTAC+AGG | + | chr5_1:14428021-14428040 | Msa0719350:intron | 40.0% | |
| TATGTAGGTCGTTTCTACAG+GGG | + | chr5_1:14428023-14428042 | Msa0719350:intron | 40.0% | |
| GCATGACTAGCAATTTGAGT+TGG | - | chr5_1:14428112-14428131 | None:intergenic | 40.0% | |
| ! | CTATTTCTTTGGCAGTTTGG+TGG | - | chr5_1:14428153-14428172 | None:intergenic | 40.0% |
| ! | TTTAAGGTAGCTGTGTCTTG+AGG | - | chr5_1:14428271-14428290 | None:intergenic | 40.0% |
| GGCCAACTGATACATTTGTT+GGG | - | chr5_1:14428323-14428342 | None:intergenic | 40.0% | |
| AGGCCAACTGATACATTTGT+TGG | - | chr5_1:14428324-14428343 | None:intergenic | 40.0% | |
| !! | TTGGCCTTGCTTTATCCAAT+CGG | + | chr5_1:14428337-14428356 | Msa0719350:CDS | 40.0% |
| !! | AGTACCGATTGGATAAAGCA+AGG | - | chr5_1:14428344-14428363 | None:intergenic | 40.0% |
| !! | GCGCAACTTGTTTAACTTGT+TGG | + | chr5_1:14428396-14428415 | Msa0719350:CDS | 40.0% |
| TTGGTCCATGCTATTCTCAG+GGG | - | chr5_1:14426279-14426298 | None:intergenic | 45.0% | |
| GTTGGTCCATGCTATTCTCA+GGG | - | chr5_1:14426280-14426299 | None:intergenic | 45.0% | |
| TGTTGGTCCATGCTATTCTC+AGG | - | chr5_1:14426281-14426300 | None:intergenic | 45.0% | |
| TGACACTGATGTCGTTGAGT+CGG | + | chr5_1:14426313-14426332 | Msa0719350:CDS | 45.0% | |
| GGAAGTCATGAAGCAAAGAG+AGG | + | chr5_1:14426431-14426450 | Msa0719350:CDS | 45.0% | |
| ! | AAAGAGAGGGCGTAAGGAAA+GGG | + | chr5_1:14426445-14426464 | Msa0719350:CDS | 45.0% |
| ! | ATACCCGTTTGGGTTAATCC+TGG | + | chr5_1:14426635-14426654 | Msa0719350:intron | 45.0% |
| ! | TACCCGTTTGGGTTAATCCT+GGG | + | chr5_1:14426636-14426655 | Msa0719350:intron | 45.0% |
| TGACCCAGGATTAACCCAAA+CGG | - | chr5_1:14426642-14426661 | None:intergenic | 45.0% | |
| TACAAAGACTGGGAGGACAT+TGG | - | chr5_1:14426668-14426687 | None:intergenic | 45.0% | |
| AATGACTAGACACTCAAGGG+TGG | + | chr5_1:14427477-14427496 | Msa0719350:intron | 45.0% | |
| CCGTTGTTCTACATGTGTCT+AGG | - | chr5_1:14427528-14427547 | None:intergenic | 45.0% | |
| ATGTAGGTCGTTTCTACAGG+GGG | + | chr5_1:14428024-14428043 | Msa0719350:intron | 45.0% | |
| CTACAGGGGGTGAAAAAACA+TGG | + | chr5_1:14428037-14428056 | Msa0719350:CDS | 45.0% | |
| AGGGGGTGAAAAAACATGGT+AGG | + | chr5_1:14428041-14428060 | Msa0719350:CDS | 45.0% | |
| GGGGGTGAAAAAACATGGTA+GGG | + | chr5_1:14428042-14428061 | Msa0719350:CDS | 45.0% | |
| GGGGTGAAAAAACATGGTAG+GGG | + | chr5_1:14428043-14428062 | Msa0719350:CDS | 45.0% | |
| AAAAACATGGTAGGGGACGT+TGG | + | chr5_1:14428050-14428069 | Msa0719350:CDS | 45.0% | |
| TTGGTCCATGCTATTCTCAG+GGG | - | chr5_1:14426279-14426298 | None:intergenic | 45.0% | |
| GTTGGTCCATGCTATTCTCA+GGG | - | chr5_1:14426280-14426299 | None:intergenic | 45.0% | |
| TGTTGGTCCATGCTATTCTC+AGG | - | chr5_1:14426281-14426300 | None:intergenic | 45.0% | |
| TGACACTGATGTCGTTGAGT+CGG | + | chr5_1:14426313-14426332 | Msa0719350:CDS | 45.0% | |
| GGAAGTCATGAAGCAAAGAG+AGG | + | chr5_1:14426431-14426450 | Msa0719350:CDS | 45.0% | |
| ! | AAAGAGAGGGCGTAAGGAAA+GGG | + | chr5_1:14426445-14426464 | Msa0719350:CDS | 45.0% |
| ! | ATACCCGTTTGGGTTAATCC+TGG | + | chr5_1:14426635-14426654 | Msa0719350:intron | 45.0% |
| ! | TACCCGTTTGGGTTAATCCT+GGG | + | chr5_1:14426636-14426655 | Msa0719350:intron | 45.0% |
| TGACCCAGGATTAACCCAAA+CGG | - | chr5_1:14426642-14426661 | None:intergenic | 45.0% | |
| TACAAAGACTGGGAGGACAT+TGG | - | chr5_1:14426668-14426687 | None:intergenic | 45.0% | |
| AATGACTAGACACTCAAGGG+TGG | + | chr5_1:14427477-14427496 | Msa0719350:intron | 45.0% | |
| CCGTTGTTCTACATGTGTCT+AGG | - | chr5_1:14427528-14427547 | None:intergenic | 45.0% | |
| ATGTAGGTCGTTTCTACAGG+GGG | + | chr5_1:14428024-14428043 | Msa0719350:intron | 45.0% | |
| CTACAGGGGGTGAAAAAACA+TGG | + | chr5_1:14428037-14428056 | Msa0719350:CDS | 45.0% | |
| AGGGGGTGAAAAAACATGGT+AGG | + | chr5_1:14428041-14428060 | Msa0719350:CDS | 45.0% | |
| GGGGGTGAAAAAACATGGTA+GGG | + | chr5_1:14428042-14428061 | Msa0719350:CDS | 45.0% | |
| GGGGTGAAAAAACATGGTAG+GGG | + | chr5_1:14428043-14428062 | Msa0719350:CDS | 45.0% | |
| AAAAACATGGTAGGGGACGT+TGG | + | chr5_1:14428050-14428069 | Msa0719350:CDS | 45.0% | |
| AGATCCCCCTGAGAATAGCA+TGG | + | chr5_1:14426271-14426290 | Msa0719350:CDS | 50.0% | |
| TGGTCCATGCTATTCTCAGG+GGG | - | chr5_1:14426278-14426297 | None:intergenic | 50.0% | |
| GACACTGATGTCGTTGAGTC+GGG | + | chr5_1:14426314-14426333 | Msa0719350:CDS | 50.0% | |
| CAAGCTGAGTCAGTACCAGA+AGG | + | chr5_1:14426410-14426429 | Msa0719350:CDS | 50.0% | |
| ! | TGAAGCAAAGAGAGGGCGTA+AGG | + | chr5_1:14426439-14426458 | Msa0719350:CDS | 50.0% |
| ! | CAAAGAGAGGGCGTAAGGAA+AGG | + | chr5_1:14426444-14426463 | Msa0719350:CDS | 50.0% |
| ! | GGCGTAAGGAAAGGGTACAT+TGG | + | chr5_1:14426453-14426472 | Msa0719350:CDS | 50.0% |
| ! | GAAAGGGTACATTGGACGGA+AGG | + | chr5_1:14426461-14426480 | Msa0719350:CDS | 50.0% |
| GACCCAGGATTAACCCAAAC+GGG | - | chr5_1:14426641-14426660 | None:intergenic | 50.0% | |
| ! | GTTTGGGTTAATCCTGGGTC+AGG | + | chr5_1:14426641-14426660 | Msa0719350:intron | 50.0% |
| AAGGTAGCTGTGTCTTGAGG+AGG | - | chr5_1:14428268-14428287 | None:intergenic | 50.0% | |
| !! | TCAGGAAGTGCAGTACCGAT+TGG | - | chr5_1:14428355-14428374 | None:intergenic | 50.0% |
| AGATCCCCCTGAGAATAGCA+TGG | + | chr5_1:14426271-14426290 | Msa0719350:CDS | 50.0% | |
| TGGTCCATGCTATTCTCAGG+GGG | - | chr5_1:14426278-14426297 | None:intergenic | 50.0% | |
| GACACTGATGTCGTTGAGTC+GGG | + | chr5_1:14426314-14426333 | Msa0719350:CDS | 50.0% | |
| CAAGCTGAGTCAGTACCAGA+AGG | + | chr5_1:14426410-14426429 | Msa0719350:CDS | 50.0% | |
| ! | TGAAGCAAAGAGAGGGCGTA+AGG | + | chr5_1:14426439-14426458 | Msa0719350:CDS | 50.0% |
| ! | CAAAGAGAGGGCGTAAGGAA+AGG | + | chr5_1:14426444-14426463 | Msa0719350:CDS | 50.0% |
| ! | GGCGTAAGGAAAGGGTACAT+TGG | + | chr5_1:14426453-14426472 | Msa0719350:CDS | 50.0% |
| ! | GAAAGGGTACATTGGACGGA+AGG | + | chr5_1:14426461-14426480 | Msa0719350:CDS | 50.0% |
| GACCCAGGATTAACCCAAAC+GGG | - | chr5_1:14426641-14426660 | None:intergenic | 50.0% | |
| ! | GTTTGGGTTAATCCTGGGTC+AGG | + | chr5_1:14426641-14426660 | Msa0719350:intron | 50.0% |
| AAGGTAGCTGTGTCTTGAGG+AGG | - | chr5_1:14428268-14428287 | None:intergenic | 50.0% | |
| !! | TCAGGAAGTGCAGTACCGAT+TGG | - | chr5_1:14428355-14428374 | None:intergenic | 50.0% |
| GACACTCAAGGGTGGAGAAC+TGG | + | chr5_1:14427485-14427504 | Msa0719350:intron | 55.0% | |
| GACACTCAAGGGTGGAGAAC+TGG | + | chr5_1:14427485-14427504 | Msa0719350:intron | 55.0% | |
| GAGGACATTGGACCTGACCC+AGG | - | chr5_1:14426656-14426675 | None:intergenic | 60.0% | |
| GAGGACATTGGACCTGACCC+AGG | - | chr5_1:14426656-14426675 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 14426206 | 14428432 | 14426206 | ID=Msa0719350;Name=Msa0719350 |
| chr5_1 | mRNA | 14426206 | 14428432 | 14426206 | ID=Msa0719350-mRNA-1;Parent=Msa0719350;Name=Msa0719350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|229 |
| chr5_1 | exon | 14426206 | 14426492 | 14426206 | ID=Msa0719350-mRNA-1:exon:5666;Parent=Msa0719350-mRNA-1 |
| chr5_1 | exon | 14428030 | 14428432 | 14428030 | ID=Msa0719350-mRNA-1:exon:5667;Parent=Msa0719350-mRNA-1 |
| chr5_1 | CDS | 14426206 | 14426492 | 14426206 | ID=Msa0719350-mRNA-1:cds;Parent=Msa0719350-mRNA-1 |
| chr5_1 | CDS | 14428030 | 14428432 | 14428030 | ID=Msa0719350-mRNA-1:cds;Parent=Msa0719350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
