AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0720240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0720240 MtrunA17_Chr5g0410881 96.813 502 12 1 1 498 1 502 0.0 998
Msa0720240 MtrunA17_Chr4g0039891 47.505 501 209 18 27 495 11 489 7.74e-127 378
Msa0720240 MtrunA17_Chr7g0260331 58.333 228 91 1 8 235 29 252 1.85e-88 275
Msa0720240 MtrunA17_Chr1g0204741 58.120 234 84 6 6 235 16 239 6.43e-83 260
Msa0720240 MtrunA17_Chr3g0135831 56.696 224 83 4 15 236 33 244 5.32e-82 259
Msa0720240 MtrunA17_Chr8g0392001 46.125 271 128 6 28 296 22 276 9.05e-67 219
Msa0720240 MtrunA17_Chr1g0185131 49.561 228 95 3 15 240 19 228 3.99e-66 217
Msa0720240 MtrunA17_Chr4g0071051 50.000 218 94 3 2 219 76 278 2.33e-65 217
Msa0720240 MtrunA17_Chr8g0379701 53.763 186 75 2 27 210 11 187 6.63e-64 213
Msa0720240 MtrunA17_Chr6g0467041 50.711 211 90 4 28 238 22 218 9.66e-64 210
Msa0720240 MtrunA17_Chr8g0378061 50.952 210 89 4 29 238 23 218 1.22e-62 212
Msa0720240 MtrunA17_Chr2g0330821 47.887 213 92 2 1 213 60 253 6.66e-61 203
Msa0720240 MtrunA17_Chr6g0485571 46.009 213 101 5 24 236 7 205 6.17e-55 187
Msa0720240 MtrunA17_Chr2g0284481 44.865 185 98 2 27 211 14 194 2.64e-51 179
Msa0720240 MtrunA17_Chr3g0134031 43.147 197 64 2 25 173 21 217 1.55e-45 163
Msa0720240 MtrunA17_Chr5g0397881 73.404 94 25 0 26 119 22 115 5.21e-45 161
Msa0720240 MtrunA17_Chr5g0441531 46.073 191 91 2 25 203 22 212 1.01e-43 155
Msa0720240 MtrunA17_Chr5g0402291 46.369 179 64 3 25 174 6 181 2.80e-42 152
Msa0720240 MtrunA17_Chr7g0257331 49.342 152 75 1 25 174 19 170 3.21e-42 150
Msa0720240 MtrunA17_Chr1g0203601 68.085 94 30 0 26 119 16 109 4.31e-42 152
Msa0720240 MtrunA17_Chr6g0472421 67.021 94 31 0 26 119 31 124 2.77e-40 148
Msa0720240 MtrunA17_Chr8g0375041 45.614 171 78 4 25 184 6 172 1.38e-38 141
Msa0720240 MtrunA17_Chr1g0179311 43.931 173 83 4 88 260 14 172 7.98e-36 136
Msa0720240 MtrunA17_Chr4g0047421 37.017 181 96 3 25 201 30 196 1.06e-32 124
Msa0720240 MtrunA17_Chr1g0179321 66.216 74 25 0 14 87 35 108 5.78e-28 107
Msa0720240 MtrunA17_Chr4g0023771 69.231 65 19 1 24 87 11 75 9.10e-26 101
Msa0720240 MtrunA17_Chr2g0330841 36.364 165 86 3 72 236 31 176 3.27e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0720240 AT1G32330.2 53.816 511 169 14 4 492 9 474 4.12e-166 478
Msa0720240 AT1G32330.1 53.816 511 169 14 4 492 9 474 4.61e-166 478
Msa0720240 AT4G17750.1 48.964 531 186 15 1 497 16 495 7.24e-145 425
Msa0720240 AT5G16820.1 50.487 513 189 14 14 497 4 480 2.37e-137 405
Msa0720240 AT5G16820.2 50.487 513 189 14 14 497 4 480 2.37e-137 405
Msa0720240 AT3G02990.1 48.776 490 188 18 27 497 22 467 5.30e-126 375
Msa0720240 AT3G22830.1 57.080 226 96 1 10 235 43 267 1.09e-83 265
Msa0720240 AT2G26150.1 57.848 223 86 3 15 236 31 246 1.16e-82 260
Msa0720240 AT2G26150.4 57.848 223 86 3 15 236 31 246 1.16e-82 260
Msa0720240 AT3G51910.1 52.074 217 80 4 21 235 22 216 1.28e-68 221
Msa0720240 AT5G03720.2 46.800 250 122 3 10 259 37 275 9.04e-68 223
Msa0720240 AT5G03720.1 46.800 250 122 3 10 259 37 275 9.04e-68 223
Msa0720240 AT1G67970.1 53.125 192 82 3 28 218 19 203 1.03e-62 209
Msa0720240 AT4G13980.1 46.460 226 96 5 29 251 24 227 2.41e-62 211
Msa0720240 AT3G63350.1 45.045 222 111 1 1 222 1 211 7.89e-61 201
Msa0720240 AT5G43840.1 42.510 247 111 4 14 260 5 220 1.29e-59 198
Msa0720240 AT4G18880.1 45.540 213 107 2 21 230 8 214 5.23e-55 189
Msa0720240 AT5G45710.3 37.762 286 148 5 27 307 12 272 1.87e-53 184
Msa0720240 AT5G45710.1 37.762 286 148 5 27 307 12 272 1.87e-53 184
Msa0720240 AT3G24520.1 43.750 208 87 2 28 235 17 194 1.68e-52 181
Msa0720240 AT5G54070.1 43.519 216 101 3 28 239 71 269 4.61e-52 180
Msa0720240 AT1G46264.1 45.026 191 61 3 25 173 31 219 5.79e-45 161
Msa0720240 AT2G41690.1 42.473 186 83 2 26 191 38 219 3.10e-42 151
Msa0720240 AT2G26150.3 54.667 150 60 3 88 236 49 191 4.03e-42 152
Msa0720240 AT2G26150.2 54.667 150 60 3 88 236 49 191 4.03e-42 152
Msa0720240 AT4G11660.1 68.085 94 30 0 26 119 57 150 4.27e-41 152
Msa0720240 AT4G36990.1 56.557 122 40 1 25 146 11 119 1.17e-40 148
Msa0720240 AT5G62020.1 62.626 99 37 0 26 124 21 119 2.88e-40 147
Msa0720240 AT4G18870.1 47.727 88 46 0 28 115 146 233 2.94e-25 105
Msa0720240 AT4G18870.1 43.363 113 47 3 5 115 2 99 9.17e-23 98.6
Msa0720240 AT1G77570.1 42.222 90 49 2 29 115 27 116 1.57e-17 80.1
Msa0720240 AT4G19630.1 37.778 90 53 1 29 115 12 101 1.87e-13 67.8

Find 174 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTAAGCAATTCTATT+TGG 0.145481 5_1:-16161270 Msa0720240:CDS
TCGGTGTCGGCGCCGGTATT+TGG 0.178029 5_1:+16164902 None:intergenic
ACAATTAGAAAACAATAATT+TGG 0.194455 5_1:+16160383 None:intergenic
AAAATTTCAAACAGGGTTTC+AGG 0.206273 5_1:-16162326 Msa0720240:intron
CCAACAACAGTTTCGTTGTT+TGG 0.230125 5_1:-16164786 Msa0720240:CDS
TGTGTAGAAGTCGGCAAATT+TGG 0.235613 5_1:-16162150 Msa0720240:CDS
TGAGGTACAGATAGAATTTC+AGG 0.240310 5_1:+16161538 None:intergenic
CGAGACAGATGATGGATTTA+TGG 0.242553 5_1:-16161359 Msa0720240:CDS
TCACCAATCAAGTAATTATC+AGG 0.249130 5_1:+16161712 None:intergenic
CATAGATGATTAAATTCTTT+TGG 0.258523 5_1:+16161090 None:intergenic
CAAAAGGTCCCTAGCGAATT+CGG 0.275635 5_1:+16164756 None:intergenic
GAATAGGGGACAAGAGATTA+TGG 0.284987 5_1:+16165067 None:intergenic
TGGATCATTACCCATTGATT+TGG 0.296226 5_1:-16161323 Msa0720240:CDS
TTTGCTGTTTCATTCATCAT+AGG 0.311359 5_1:+16161796 None:intergenic
CAACAACAGTTTCGTTGTTT+GGG 0.319788 5_1:-16164785 Msa0720240:CDS
TTAATGTGGAAAAGTGAAAT+TGG 0.321148 5_1:+16165026 None:intergenic
CGGTGTCGGCGCCGGTATTT+GGG 0.322223 5_1:+16164903 None:intergenic
ACATATAAATGTGATCAAAA+TGG 0.327814 5_1:+16160356 None:intergenic
CTTCTTGTGTAACTGATTTG+TGG 0.343000 5_1:-16160550 Msa0720240:three_prime_UTR
CAACAGATGCGATAGTTTCA+TGG 0.344788 5_1:-16164816 Msa0720240:CDS
AACCCTGATAATTACTTGAT+TGG 0.346275 5_1:-16161715 Msa0720240:CDS
GTCGTTGCTCCATTCCTTGA+AGG 0.347154 5_1:+16162010 None:intergenic
GCCTCAAAATCCTCTGGAAT+TGG 0.349084 5_1:+16161229 None:intergenic
CCAATGTTATAGGAAATCTT+TGG 0.360135 5_1:-16160787 Msa0720240:intron
AAAACAAGAATTCTTCGAAA+TGG 0.362858 5_1:-16164956 Msa0720240:exon
GTGTAGAAGTCGGCAAATTT+GGG 0.362865 5_1:-16162149 Msa0720240:CDS
TATACCTGAAGACAATTATA+TGG 0.363191 5_1:-16161386 Msa0720240:CDS
ACATTACTCTGTTTAGTTGC+TGG 0.372084 5_1:-16160579 Msa0720240:three_prime_UTR
ACCAGGGCTTTGGACGGCTT+TGG 0.378818 5_1:+16161963 None:intergenic
TTTGCAAATTCCCAACGATC+TGG 0.381736 5_1:+16162294 None:intergenic
TTGAACTTGAAGGGAGAATA+GGG 0.382880 5_1:+16165052 None:intergenic
ATCACATTTATATGTTTAGT+TGG 0.386381 5_1:-16160348 Msa0720240:three_prime_UTR
TCAAATTTGGGAGTATGAAA+TGG 0.387128 5_1:-16160408 Msa0720240:three_prime_UTR
TCTGGTACTGAAGGTATATC+AGG 0.389774 5_1:+16161433 None:intergenic
TCTGCTCTGTTAGTTGATCC+AGG 0.390931 5_1:+16161134 None:intergenic
CAAATTTGGGCTTGAGGAAG+AGG 0.394429 5_1:-16162136 Msa0720240:CDS
ACTCAAATTCCAGTGTCAAC+AGG 0.398893 5_1:-16161592 Msa0720240:CDS
TTTGTTAAGCAATTCTATTT+GGG 0.398896 5_1:-16161269 Msa0720240:CDS
GAGCAAAGAAACCAGGGCTT+TGG 0.405473 5_1:+16161953 None:intergenic
TGCTAAGGAAGATCATGAAA+TGG 0.411880 5_1:-16161768 Msa0720240:CDS
GAGGTGCAGCCAACAGAAAA+TGG 0.412142 5_1:-16161178 Msa0720240:CDS
TATTTAACAATTTGTCCATC+AGG 0.412857 5_1:+16161823 None:intergenic
CTGATTTGTGGTGCTTCAAT+TGG 0.420338 5_1:-16160538 Msa0720240:three_prime_UTR
TCCCCAACTTGATGTTTCCT+TGG 0.422209 5_1:-16160729 Msa0720240:three_prime_UTR
CACCAAGGAAACATCAAGTT+GGG 0.424460 5_1:+16160727 None:intergenic
GGAGCCATATAATTGTCTTC+AGG 0.427662 5_1:+16161382 None:intergenic
ATTGAACTTGAAGGGAGAAT+AGG 0.428441 5_1:+16165051 None:intergenic
GTGCACTTGTCAGACACTTT+GGG 0.429146 5_1:+16160664 None:intergenic
TGGAATTGAATGCCACTAGA+TGG 0.429293 5_1:-16160490 Msa0720240:three_prime_UTR
CGTGCACTTGTCAGACACTT+TGG 0.432945 5_1:+16160663 None:intergenic
ATCCATTGTCTGTCTAAAAC+AGG 0.434029 5_1:-16160324 Msa0720240:three_prime_UTR
GCTTGAAGAACTTCGGCAAA+AGG 0.436166 5_1:+16164740 None:intergenic
AACAACAAAATGACAGCAAT+AGG 0.448374 5_1:-16161921 Msa0720240:CDS
GAAACTATCGCATCTGTTGA+AGG 0.449248 5_1:+16164820 None:intergenic
TGCAGCCAACAGAAAATGGC+TGG 0.460415 5_1:-16161174 Msa0720240:CDS
TGAAAGACAATCCAAATCAA+TGG 0.461549 5_1:+16161312 None:intergenic
GGGGTGAAATAAGTATCAAT+AGG 0.463311 5_1:+16160460 None:intergenic
GGCGCGTTCGCGTTTAGCAT+CGG 0.464774 5_1:+16164883 None:intergenic
ACAATGGTTCAGCGCCTTCA+AGG 0.468085 5_1:-16162024 Msa0720240:CDS
GCTGAACCATTGTTTGCAGC+TGG 0.470479 5_1:+16162034 None:intergenic
GAAGGTTGACCCAGATCGTT+GGG 0.471844 5_1:-16162304 Msa0720240:CDS
CCATGGTCATACTCAACAAC+AGG 0.472356 5_1:-16162211 Msa0720240:CDS
CGTTGGGAATTTGCAAATGA+GGG 0.474986 5_1:-16162288 Msa0720240:CDS
ACATCCATACACATTAAAAC+AGG 0.477167 5_1:-16160288 Msa0720240:three_prime_UTR
ATGTTGGCCTCAAAATCCTC+TGG 0.479139 5_1:+16161223 None:intergenic
GCTAAGGAAGATCATGAAAT+GGG 0.481953 5_1:-16161767 Msa0720240:CDS
TTGAAGATTTACACAAGGAC+AGG 0.484498 5_1:-16160628 Msa0720240:three_prime_UTR
GAAAGACAATCCAAATCAAT+GGG 0.486613 5_1:+16161313 None:intergenic
GCCAAAGCCGTCCAAAGCCC+TGG 0.488993 5_1:-16161964 Msa0720240:CDS
ATAACATCTGCTTGAGAAGT+CGG 0.493923 5_1:+16161460 None:intergenic
TGGCTGCACCTCATTCCCTC+TGG 0.494605 5_1:+16161189 None:intergenic
CCAAACAACGAAACTGTTGT+TGG 0.495551 5_1:+16164786 None:intergenic
TTTAGCATCGGTGTCGGCGC+CGG 0.495901 5_1:+16164895 None:intergenic
CGAAATATCCAGAGGGAATG+AGG 0.497477 5_1:-16161197 Msa0720240:CDS
CCTTGAGTCCCTGTTGACAC+TGG 0.498243 5_1:+16161583 None:intergenic
AAGAATGAGATAAAAGAGAA+TGG 0.499152 5_1:-16160510 Msa0720240:three_prime_UTR
AAAAGGTCCCTAGCGAATTC+GGG 0.501028 5_1:+16164757 None:intergenic
TAACATCTGCTTGAGAAGTC+GGG 0.501630 5_1:+16161461 None:intergenic
GGGACCCACCCGAATTCGCT+AGG 0.503998 5_1:-16164765 Msa0720240:CDS
AGCTCTACAAGCTGGAACTC+GGG 0.505067 5_1:-16161655 Msa0720240:CDS
ACTTGATGTTTCCTTGGTGA+TGG 0.506863 5_1:-16160723 Msa0720240:three_prime_UTR
CATAAATCCATCATCTGTCT+CGG 0.507108 5_1:+16161360 None:intergenic
CAAATCATCAATGTCTGCAC+CGG 0.507465 5_1:+16161288 None:intergenic
TCGTTGGGAATTTGCAAATG+AGG 0.508434 5_1:-16162289 Msa0720240:CDS
CTGCTCTGTTAGTTGATCCA+GGG 0.508669 5_1:+16161135 None:intergenic
TGAGTAGACTGCACTGAAGA+TGG 0.510797 5_1:+16161610 None:intergenic
TTCGCGTTTAGCATCGGTGT+CGG 0.511333 5_1:+16164889 None:intergenic
TTTATGGATCCGAGTTCACT+TGG 0.511418 5_1:-16161343 Msa0720240:CDS
TCTGGATATTTCGTCAATGT+TGG 0.511981 5_1:+16161207 None:intergenic
TTGCAAATTCCCAACGATCT+GGG 0.513798 5_1:+16162295 None:intergenic
CAAGAATTCTTCGAAATGGA+TGG 0.514936 5_1:-16164952 Msa0720240:exon
TTGTTATGCTTGAAGAACTT+CGG 0.516006 5_1:+16164733 None:intergenic
GATGGAGCAAGCGGCGGAGA+GGG 0.517366 5_1:-16164934 Msa0720240:CDS
TCTGCAAATGTTATGAAGGA+TGG 0.520402 5_1:-16161505 Msa0720240:CDS
GGCTTTGGACGGCTTTGGCA+AGG 0.521460 5_1:+16161968 None:intergenic
GGTTCAGCGCCTTCAAGGAA+TGG 0.521472 5_1:-16162019 Msa0720240:CDS
GGATCAACTAACAGAGCAGA+TGG 0.526736 5_1:-16161131 Msa0720240:CDS
ATGGCTCCCGAGACAGATGA+TGG 0.528224 5_1:-16161367 Msa0720240:CDS
GGAAGGTTGACCCAGATCGT+TGG 0.529784 5_1:-16162305 Msa0720240:CDS
TAGCTCTACAAGCTGGAACT+CGG 0.530135 5_1:-16161656 Msa0720240:CDS
CTTGATGTTTCCTTGGTGAT+GGG 0.530241 5_1:-16160722 Msa0720240:three_prime_UTR
TCACCAAGGAAACATCAAGT+TGG 0.532484 5_1:+16160726 None:intergenic
TGTTTGCAGCTGGCCGTCAG+TGG 0.533443 5_1:+16162044 None:intergenic
TTACACAAGGACAGGAACAT+TGG 0.540830 5_1:-16160620 Msa0720240:three_prime_UTR
TTGACCTTTCATACTGTCCA+AGG 0.543763 5_1:-16161058 Msa0720240:intron
AACAATTTGTCCATCAGGAG+GGG 0.543951 5_1:+16161828 None:intergenic
ATAAATCCATCATCTGTCTC+GGG 0.544485 5_1:+16161361 None:intergenic
GGACAATAATACTCAGCCCC+TGG 0.544550 5_1:-16161152 Msa0720240:CDS
CTCAAATTCCAGTGTCAACA+GGG 0.545676 5_1:-16161591 Msa0720240:CDS
TAACAATTTGTCCATCAGGA+GGG 0.546075 5_1:+16161827 None:intergenic
GGGTTCAACCACCCAAATAC+CGG 0.548137 5_1:-16164914 Msa0720240:CDS
GAGCAAGCTACCCCTCCTGA+TGG 0.552465 5_1:-16161838 Msa0720240:CDS
GCTACTACTGTCCATTGCAC+TGG 0.552846 5_1:+16161675 None:intergenic
GATAATTACTTGATTGGTGA+TGG 0.554314 5_1:-16161709 Msa0720240:CDS
TGCTCTGTTAGTTGATCCAG+GGG 0.555861 5_1:+16161136 None:intergenic
CTACTGTCCATTGCACTGGA+TGG 0.557158 5_1:+16161679 None:intergenic
ATGGACAGAGTTCATCAGTA+GGG 0.560915 5_1:-16162176 Msa0720240:CDS
TTGAATGCCACTAGATGGAA+TGG 0.561211 5_1:-16160485 Msa0720240:three_prime_UTR
TTTGCAGATGCTGCAGCTTG+AGG 0.562895 5_1:+16161520 None:intergenic
AAACAGCAAAAGCAATGCTA+AGG 0.565264 5_1:-16161783 Msa0720240:CDS
CCAGTGTCAACAGGGACTCA+AGG 0.569636 5_1:-16161583 Msa0720240:CDS
TTTCAAACAGGGTTTCAGGA+AGG 0.570624 5_1:-16162322 Msa0720240:intron
GGTAATGATCCAAGTGAACT+CGG 0.570835 5_1:+16161334 None:intergenic
GATTTGGATTGTCTTTCACC+CGG 0.577390 5_1:-16161307 Msa0720240:CDS
GGCTTGAGGAAGAGGTTGAG+AGG 0.577943 5_1:-16162128 Msa0720240:CDS
GGCACAATCTCTGGTACTGA+AGG 0.579818 5_1:+16161424 None:intergenic
TTAACAATTTGTCCATCAGG+AGG 0.580490 5_1:+16161826 None:intergenic
CACCAATCAAGTAATTATCA+GGG 0.580602 5_1:+16161713 None:intergenic
AGCATCTGCAAATGTTATGA+AGG 0.585668 5_1:-16161509 Msa0720240:CDS
TGTCGGCGCCGGTATTTGGG+TGG 0.587096 5_1:+16164906 None:intergenic
AGGTCCCTAGCGAATTCGGG+TGG 0.590111 5_1:+16164760 None:intergenic
TACTTCACCATCCAGTGCAA+TGG 0.590271 5_1:-16161686 Msa0720240:CDS
CATGGACAGAGTTCATCAGT+AGG 0.591063 5_1:-16162177 Msa0720240:CDS
ACAAACTGAGCAAAGAAACC+AGG 0.596219 5_1:+16161946 None:intergenic
GGACCCACCCGAATTCGCTA+GGG 0.598350 5_1:-16164764 Msa0720240:CDS
TGTTGAGTATGACCATGGGC+AGG 0.599305 5_1:+16162216 None:intergenic
ATAGGTACCATTCCATCTAG+TGG 0.606112 5_1:+16160478 None:intergenic
CAACAGGCTCAGCAACCGCA+TGG 0.606577 5_1:-16162195 Msa0720240:CDS
AAAGAAACCAGGGCTTTGGA+CGG 0.607667 5_1:+16161957 None:intergenic
AGTCGGCAAATTTGGGCTTG+AGG 0.610170 5_1:-16162142 Msa0720240:CDS
TTCTCATGCAAGAGCTTGTG+AGG 0.613430 5_1:-16162086 Msa0720240:CDS
ACAGTAGTAGCTCTACAAGC+TGG 0.613534 5_1:-16161663 Msa0720240:CDS
ATTACCTTGGACAGTATGAA+AGG 0.614492 5_1:+16161054 None:intergenic
GTAGGGGCATGTGTAGAAGT+CGG 0.619207 5_1:-16162159 Msa0720240:CDS
CAGCAGCAACAAACCACTGA+CGG 0.620232 5_1:-16162057 Msa0720240:CDS
TTCGAAATGGATGGAGCAAG+CGG 0.623140 5_1:-16164943 Msa0720240:exon
AAATTGGTGATTGAACTTGA+AGG 0.626120 5_1:+16165042 None:intergenic
AAGCGTCGGCTCAAGCAGGA+TGG 0.626260 5_1:-16161877 Msa0720240:CDS
AAATCATCAATGTCTGCACC+GGG 0.630153 5_1:+16161289 None:intergenic
TGAACTTGAAGGGAGAATAG+GGG 0.633609 5_1:+16165053 None:intergenic
TTTGAGCAAAACTTATGACA+TGG 0.634177 5_1:-16164851 Msa0720240:CDS
GCAGCCAACAGAAAATGGCT+GGG 0.636582 5_1:-16161173 Msa0720240:CDS
AATTGGTGATTGAACTTGAA+GGG 0.637491 5_1:+16165043 None:intergenic
TCTGCAAACTCCAATTCCAG+AGG 0.640517 5_1:-16161239 Msa0720240:CDS
GATCAACTAACAGAGCAGAT+GGG 0.641177 5_1:-16161130 Msa0720240:CDS
CTCGGGAGTAACTCTTCAAG+AGG 0.645660 5_1:-16161638 Msa0720240:CDS
TGACGGCCAGCTGCAAACAA+TGG 0.646370 5_1:-16162040 Msa0720240:CDS
CCTGTTGTTGAGTATGACCA+TGG 0.647258 5_1:+16162211 None:intergenic
GGATGGAGCAAGCGGCGGAG+AGG 0.650098 5_1:-16164935 Msa0720240:CDS
ACATTGACGAAATATCCAGA+GGG 0.654829 5_1:-16161204 Msa0720240:CDS
TGGACAGAGTTCATCAGTAG+GGG 0.659673 5_1:-16162175 Msa0720240:CDS
ACCAAGGAAACATCAAGTTG+GGG 0.663101 5_1:+16160728 None:intergenic
AGTCGAAGAAAACCTGCCCA+TGG 0.665848 5_1:-16162228 Msa0720240:CDS
CAAACTGAGCAAAGAAACCA+GGG 0.668272 5_1:+16161947 None:intergenic
GGTCCCTAGCGAATTCGGGT+GGG 0.673393 5_1:+16164761 None:intergenic
CTGTTGTTGAGTATGACCAT+GGG 0.673452 5_1:+16162212 None:intergenic
TTGCTTTGAAGATTTACACA+AGG 0.678914 5_1:-16160633 Msa0720240:three_prime_UTR
AACATTGACGAAATATCCAG+AGG 0.690077 5_1:-16161205 Msa0720240:CDS
GAAATGGATGGAGCAAGCGG+CGG 0.691235 5_1:-16164940 Msa0720240:CDS
GAGCAAAACTTATGACATGG+TGG 0.697463 5_1:-16164848 Msa0720240:CDS
GTAGACTGCACTGAAGATGG+AGG 0.697646 5_1:+16161613 None:intergenic
ACTGATGAACTCTGTCCATG+CGG 0.724135 5_1:+16162180 None:intergenic
TTATTGAAAGATTCTACACG+CGG 0.735179 5_1:+16161739 None:intergenic
AGTGTCTGACAAGTGCACGT+TGG 0.739192 5_1:-16160659 Msa0720240:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CACAATAATTTTTTTTTTTT+TGG - chr5_1:16161222-16161241 Msa0720240:CDS 10.0%
!!! CAATAATTTTTTTTTTTTTG+GGG - chr5_1:16161224-16161243 Msa0720240:CDS 10.0%
!! TATATATATTATAGTATGTA+AGG - chr5_1:16161705-16161724 Msa0720240:CDS 10.0%
!! TTCAAAAAAAAAAAAATAGT+GGG + chr5_1:16164949-16164968 None:intergenic 10.0%
!! TTTCAAAAAAAAAAAAATAG+TGG + chr5_1:16164950-16164969 None:intergenic 10.0%
!! TTGAAAAATTAAATCAAATT+TGG - chr5_1:16164964-16164983 Msa0720240:five_prime_UTR 10.0%
!! TGAAAAATTAAATCAAATTT+GGG - chr5_1:16164965-16164984 Msa0720240:five_prime_UTR 10.0%
!!! GATTTTGATTTTTTTTAATG+TGG + chr5_1:16160376-16160395 None:intergenic 15.0%
!! AAAAAAATTATTGTGAGAAT+GGG + chr5_1:16161217-16161236 None:intergenic 15.0%
!! AAAAAAAATTATTGTGAGAA+TGG + chr5_1:16161218-16161237 None:intergenic 15.0%
!! TTACAAAAATTGAAAAATGT+AGG + chr5_1:16161913-16161932 None:intergenic 15.0%
!!! AGTATTTTTCTTATAATTTG+AGG - chr5_1:16162205-16162224 Msa0720240:CDS 15.0%
!! TCAAAAAAAAAAAAATAGTG+GGG + chr5_1:16164948-16164967 None:intergenic 15.0%
!! ACAATTAGAAAACAATAATT+TGG + chr5_1:16165005-16165024 None:intergenic 15.0%
!!! AAAATCAAAATCACTCTTTT+AGG - chr5_1:16160384-16160403 Msa0720240:three_prime_UTR 20.0%
!!! AAATCAAAATCACTCTTTTA+GGG - chr5_1:16160385-16160404 Msa0720240:three_prime_UTR 20.0%
!!! AAAGTGTTTAATTTACTTTG+TGG - chr5_1:16160855-16160874 Msa0720240:intron 20.0%
!!! AAGTGTTTAATTTACTTTGT+GGG - chr5_1:16160856-16160875 Msa0720240:intron 20.0%
!!! TGATGTTTTTGTTAATTTGT+GGG - chr5_1:16160897-16160916 Msa0720240:intron 20.0%
!!! ATCTCTTTCATTTTAATTGA+AGG + chr5_1:16161481-16161500 None:intergenic 20.0%
!! TCAATTAAAATGAAAGAGAT+AGG - chr5_1:16161481-16161500 Msa0720240:CDS 20.0%
!! CAATTAAAATGAAAGAGATA+GGG - chr5_1:16161482-16161501 Msa0720240:CDS 20.0%
!! CATTGTATATTCAATATCAA+AGG - chr5_1:16161680-16161699 Msa0720240:CDS 20.0%
!!! ATTATTATGAAGAGGATTTT+AGG - chr5_1:16161742-16161761 Msa0720240:CDS 20.0%
!!! TTATTATGAAGAGGATTTTA+GGG - chr5_1:16161743-16161762 Msa0720240:CDS 20.0%
!! TCATATTATCCTCTTAAAAA+AGG + chr5_1:16162313-16162332 None:intergenic 20.0%
!!! AAAACTTTAGCTTTTTGTTA+TGG - chr5_1:16162561-16162580 Msa0720240:intron 20.0%
!! TTATGGAAAATAAACTTTCT+TGG - chr5_1:16162578-16162597 Msa0720240:intron 20.0%
!!! ATTTTATAGGAAAAATAGTC+AGG + chr5_1:16163044-16163063 None:intergenic 20.0%
!! TTTCCTATAAAATTTCAAAC+AGG - chr5_1:16163051-16163070 Msa0720240:intron 20.0%
!! TTCCTATAAAATTTCAAACA+GGG - chr5_1:16163052-16163071 Msa0720240:intron 20.0%
!!! ATTTGTTAAGCAATTCTATT+TGG - chr5_1:16164115-16164134 Msa0720240:intron 20.0%
!! TTTGTTAAGCAATTCTATTT+GGG - chr5_1:16164116-16164135 Msa0720240:intron 20.0%
!!! CATAGATGATTAAATTCTTT+TGG + chr5_1:16164298-16164317 None:intergenic 20.0%
!!! AATCTAATTTTCTTTTTCTG+TGG - chr5_1:16164473-16164492 Msa0720240:intron 20.0%
!!! AAAACAAGTTATGAACTTTT+TGG - chr5_1:16164524-16164543 Msa0720240:intron 20.0%
!! CAAAAAAAAAAAAATAGTGG+GGG + chr5_1:16164947-16164966 None:intergenic 20.0%
!! ACATATAAATGTGATCAAAA+TGG + chr5_1:16165032-16165051 None:intergenic 20.0%
!! ATCACATTTATATGTTTAGT+TGG - chr5_1:16165037-16165056 Msa0720240:five_prime_UTR 20.0%
!!! ATTTATTGATTTTGTGTGTG+GGG + chr5_1:16160298-16160317 None:intergenic 25.0%
!!! GATTTATTGATTTTGTGTGT+GGG + chr5_1:16160299-16160318 None:intergenic 25.0%
! TTAATGTGGAAAAGTGAAAT+TGG + chr5_1:16160362-16160381 None:intergenic 25.0%
! AAAACAAGAATTCTTCGAAA+TGG - chr5_1:16160429-16160448 Msa0720240:three_prime_UTR 25.0%
!! TCATAAGTTTTGCTCAAAAA+CGG + chr5_1:16160532-16160551 None:intergenic 25.0%
!!! CACTCTTTTAACTCTTTTAA+CGG - chr5_1:16160731-16160750 Msa0720240:three_prime_UTR 25.0%
!!! ATTTCGTTTGATTTGAGTTT+TGG - chr5_1:16160761-16160780 Msa0720240:three_prime_UTR 25.0%
!! AGTGTTTAATTTACTTTGTG+GGG - chr5_1:16160857-16160876 Msa0720240:intron 25.0%
!!! CTGATGTTTTTGTTAATTTG+TGG - chr5_1:16160896-16160915 Msa0720240:intron 25.0%
!!! TGGATGTTGATTTGATTTAA+TGG - chr5_1:16160944-16160963 Msa0720240:intron 25.0%
!!! GGATGTTGATTTGATTTAAT+GGG - chr5_1:16160945-16160964 Msa0720240:intron 25.0%
!! GATTTTTGAACTGTTTGTTT+TGG - chr5_1:16160983-16161002 Msa0720240:intron 25.0%
!!! TGTTTTGGTGAAATATAATG+AGG - chr5_1:16160998-16161017 Msa0720240:intron 25.0%
! ATGACACTAAATGATAAAGA+GGG + chr5_1:16161267-16161286 None:intergenic 25.0%
! AGTAAATTTCCTTACTTTCA+CGG + chr5_1:16161454-16161473 None:intergenic 25.0%
! GTTAATCAGTTACTTGATTA+TGG - chr5_1:16161643-16161662 Msa0720240:CDS 25.0%
! GATATTGAATATACAATGCA+CGG + chr5_1:16161678-16161697 None:intergenic 25.0%
! AGAATTATTTACTATGAAGC+TGG - chr5_1:16161773-16161792 Msa0720240:CDS 25.0%
!! TTTTGTAAGAAGAATGATGA+AGG - chr5_1:16161925-16161944 Msa0720240:CDS 25.0%
! GATACTGTATGTATTCAATT+TGG - chr5_1:16161982-16162001 Msa0720240:CDS 25.0%
! AATGTAGTTTATGATACGAT+AGG - chr5_1:16162025-16162044 Msa0720240:CDS 25.0%
! GCTTTATAATTAACTGCTTT+AGG - chr5_1:16162076-16162095 Msa0720240:CDS 25.0%
! ATAAATTCATAGCAAGTAAG+TGG + chr5_1:16162347-16162366 None:intergenic 25.0%
! ATTGATTGTATCAAAACACT+AGG - chr5_1:16162371-16162390 Msa0720240:intron 25.0%
! GTTAAGGTTCAAAAGATAAA+TGG + chr5_1:16162669-16162688 None:intergenic 25.0%
! CTTTATTGTCAACTTAGTTA+AGG + chr5_1:16162685-16162704 None:intergenic 25.0%
! TAAAATATCAGCACTCAATT+TGG - chr5_1:16162782-16162801 Msa0720240:intron 25.0%
! AAAAAGAGAGAAGACAATTA+AGG + chr5_1:16162943-16162962 None:intergenic 25.0%
!!! TCGAAAGTTGTGTTTTTTTA+TGG - chr5_1:16163002-16163021 Msa0720240:intron 25.0%
!!! AACCCTGTTTGAAATTTTAT+AGG + chr5_1:16163057-16163076 None:intergenic 25.0%
! TATTTAACAATTTGTCCATC+AGG + chr5_1:16163565-16163584 None:intergenic 25.0%
!! GGTATATCAAGAATACTTTT+AGG + chr5_1:16163985-16164004 None:intergenic 25.0%
! TATACCTGAAGACAATTATA+TGG - chr5_1:16163999-16164018 Msa0720240:intron 25.0%
!!! TCATCACTTGTGTATTTTTT+GGG + chr5_1:16164363-16164382 None:intergenic 25.0%
!!! ATCATCACTTGTGTATTTTT+TGG + chr5_1:16164364-16164383 None:intergenic 25.0%
! AAGAATGAGATAAAAGAGAA+TGG - chr5_1:16164875-16164894 Msa0720240:CDS 25.0%
!!! TATACCTGTTTTAATGTGTA+TGG + chr5_1:16165104-16165123 None:intergenic 25.0%
!!! GGATTTATTGATTTTGTGTG+TGG + chr5_1:16160300-16160319 None:intergenic 30.0%
! AATTGGTGATTGAACTTGAA+GGG + chr5_1:16160345-16160364 None:intergenic 30.0%
! AAATTGGTGATTGAACTTGA+AGG + chr5_1:16160346-16160365 None:intergenic 30.0%
TTTGAGCAAAACTTATGACA+TGG - chr5_1:16160534-16160553 Msa0720240:three_prime_UTR 30.0%
TTGTTATGCTTGAAGAACTT+CGG + chr5_1:16160655-16160674 None:intergenic 30.0%
TTTGATCTATGATTATGCTG+TGG - chr5_1:16160924-16160943 Msa0720240:intron 30.0%
CATGACACTAAATGATAAAG+AGG + chr5_1:16161268-16161287 None:intergenic 30.0%
CTCTTTATCATTTAGTGTCA+TGG - chr5_1:16161266-16161285 Msa0720240:CDS 30.0%
TGATCTGAATTGTGGTTATA+AGG - chr5_1:16161341-16161360 Msa0720240:CDS 30.0%
GATCTGAATTGTGGTTATAA+GGG - chr5_1:16161342-16161361 Msa0720240:CDS 30.0%
ATCTGAATTGTGGTTATAAG+GGG - chr5_1:16161343-16161362 Msa0720240:CDS 30.0%
TTAAAATGAAAGAGATAGGG+TGG - chr5_1:16161485-16161504 Msa0720240:CDS 30.0%
TAAAATGAAAGAGATAGGGT+GGG - chr5_1:16161486-16161505 Msa0720240:CDS 30.0%
GTTTCCTTCTTTCAAAAGAA+TGG - chr5_1:16161522-16161541 Msa0720240:CDS 30.0%
!! CTATCCATTCTTTTGAAAGA+AGG + chr5_1:16161529-16161548 None:intergenic 30.0%
TTACAAAGAAAGCTATTCTC+AGG - chr5_1:16161621-16161640 Msa0720240:CDS 30.0%
CGTAGTGAATTATTATGAAG+AGG - chr5_1:16161734-16161753 Msa0720240:CDS 30.0%
ATTTACTATGAAGCTGGTAT+TGG - chr5_1:16161779-16161798 Msa0720240:CDS 30.0%
!!! ACTACATTTTTCAAGAAACG+AGG + chr5_1:16162013-16162032 None:intergenic 30.0%
!! AATTAACTGCTTTAGGAAGA+TGG - chr5_1:16162083-16162102 Msa0720240:CDS 30.0%
GCTTAAAAGTAAGAATGCAA+CGG + chr5_1:16162184-16162203 None:intergenic 30.0%
TGCCAATAACAAAATCAACT+GGG + chr5_1:16162434-16162453 None:intergenic 30.0%
ATGCCAATAACAAAATCAAC+TGG + chr5_1:16162435-16162454 None:intergenic 30.0%
!! TTTGTTATTGGCATTCGTTA+AGG - chr5_1:16162441-16162460 Msa0720240:intron 30.0%
AGTTGACAATAAAGAGATAG+TGG - chr5_1:16162691-16162710 Msa0720240:intron 30.0%
! TTTCTGGACATAAGACTTTT+GGG - chr5_1:16162741-16162760 Msa0720240:intron 30.0%
! ATGTTTTATCGAACCCATAA+AGG + chr5_1:16162827-16162846 None:intergenic 30.0%
TAGTATTACACACTCAATTC+TGG + chr5_1:16162883-16162902 None:intergenic 30.0%
ATTAAGGATGTGCAACAATA+TGG + chr5_1:16162927-16162946 None:intergenic 30.0%
TATAGGAAAAATAGTCAGGA+AGG + chr5_1:16163040-16163059 None:intergenic 30.0%
AAAATTTCAAACAGGGTTTC+AGG - chr5_1:16163059-16163078 Msa0720240:intron 30.0%
AACAACAAAATGACAGCAAT+AGG - chr5_1:16163464-16163483 Msa0720240:intron 30.0%
!! TTTGCTGTTTCATTCATCAT+AGG + chr5_1:16163592-16163611 None:intergenic 30.0%
TTATTGAAAGATTCTACACG+CGG + chr5_1:16163649-16163668 None:intergenic 30.0%
AACCCTGATAATTACTTGAT+TGG - chr5_1:16163670-16163689 Msa0720240:intron 30.0%
CACCAATCAAGTAATTATCA+GGG + chr5_1:16163675-16163694 None:intergenic 30.0%
TCACCAATCAAGTAATTATC+AGG + chr5_1:16163676-16163695 None:intergenic 30.0%
GATAATTACTTGATTGGTGA+TGG - chr5_1:16163676-16163695 Msa0720240:intron 30.0%
GAAAGACAATCCAAATCAAT+GGG + chr5_1:16164075-16164094 None:intergenic 30.0%
TGAAAGACAATCCAAATCAA+TGG + chr5_1:16164076-16164095 None:intergenic 30.0%
TCAACAAGGATTAAATGACA+AGG + chr5_1:16164550-16164569 None:intergenic 30.0%
TAACTAATGAACACTCAACA+AGG + chr5_1:16164564-16164583 None:intergenic 30.0%
CCAAAGATTTCCTATAACAT+TGG + chr5_1:16164601-16164620 None:intergenic 30.0%
CCAATGTTATAGGAAATCTT+TGG - chr5_1:16164598-16164617 Msa0720240:intron 30.0%
!! TTGCTTTGAAGATTTACACA+AGG - chr5_1:16164752-16164771 Msa0720240:CDS 30.0%
! TCAAATTTGGGAGTATGAAA+TGG - chr5_1:16164977-16164996 Msa0720240:five_prime_UTR 30.0%
ACATCCATACACATTAAAAC+AGG - chr5_1:16165097-16165116 Msa0720240:five_prime_UTR 30.0%
TTGAACTTGAAGGGAGAATA+GGG + chr5_1:16160336-16160355 None:intergenic 35.0%
ATTGAACTTGAAGGGAGAAT+AGG + chr5_1:16160337-16160356 None:intergenic 35.0%
CAAGAATTCTTCGAAATGGA+TGG - chr5_1:16160433-16160452 Msa0720240:three_prime_UTR 35.0%
! TAAGTTTTGCTCAAAAACGG+TGG + chr5_1:16160529-16160548 None:intergenic 35.0%
CAACAACAGTTTCGTTGTTT+GGG - chr5_1:16160600-16160619 Msa0720240:three_prime_UTR 35.0%
GAAATATAATGAGGACTGAG+TGG - chr5_1:16161007-16161026 Msa0720240:intron 35.0%
! ATGGTTTTCTTCGAGTGAAA+TGG - chr5_1:16161285-16161304 Msa0720240:CDS 35.0%
TAGTGATGTGATCTGAATTG+TGG - chr5_1:16161333-16161352 Msa0720240:CDS 35.0%
TCTGAATTGTGGTTATAAGG+GGG - chr5_1:16161344-16161363 Msa0720240:CDS 35.0%
!! TGATTTGGTGTGGTTGAATT+AGG - chr5_1:16161394-16161413 Msa0720240:CDS 35.0%
GTATGAACTTTGCAATGATG+TGG - chr5_1:16162105-16162124 Msa0720240:CDS 35.0%
!! GCATGTTTTTATGTAGCATG+AGG - chr5_1:16162158-16162177 Msa0720240:CDS 35.0%
ATTCAATACGCCAAAATGGT+GGG - chr5_1:16162238-16162257 Msa0720240:CDS 35.0%
!! AGCCCAGTTGATTTTGTTAT+TGG - chr5_1:16162429-16162448 Msa0720240:intron 35.0%
TGTTCAGGAAACTAGTAGAT+TGG + chr5_1:16162470-16162489 None:intergenic 35.0%
ACTTTCTTGGATTCAACTTC+TGG - chr5_1:16162591-16162610 Msa0720240:intron 35.0%
CAATAAGCCATGTGTATCAA+TGG + chr5_1:16162622-16162641 None:intergenic 35.0%
!! GTTTCTGGACATAAGACTTT+TGG - chr5_1:16162740-16162759 Msa0720240:intron 35.0%
!!! TGAGTGCTGATATTTTACTC+AGG + chr5_1:16162779-16162798 None:intergenic 35.0%
ATATCAGCACTCAATTTGGT+TGG - chr5_1:16162786-16162805 Msa0720240:intron 35.0%
TATCAGCACTCAATTTGGTT+GGG - chr5_1:16162787-16162806 Msa0720240:intron 35.0%
TGACTGGTATACATCCTTTA+TGG - chr5_1:16162810-16162829 Msa0720240:intron 35.0%
GACTGGTATACATCCTTTAT+GGG - chr5_1:16162811-16162830 Msa0720240:intron 35.0%
ATGTGCAACAATATGGCTAA+AGG + chr5_1:16162920-16162939 None:intergenic 35.0%
TAACAATTTGTCCATCAGGA+GGG + chr5_1:16163561-16163580 None:intergenic 35.0%
TTAACAATTTGTCCATCAGG+AGG + chr5_1:16163562-16163581 None:intergenic 35.0%
AAACAGCAAAAGCAATGCTA+AGG - chr5_1:16163602-16163621 Msa0720240:intron 35.0%
TGCTAAGGAAGATCATGAAA+TGG - chr5_1:16163617-16163636 Msa0720240:intron 35.0%
GCTAAGGAAGATCATGAAAT+GGG - chr5_1:16163618-16163637 Msa0720240:intron 35.0%
!!! ATTTCAGGTTTTTCTGCTGA+GGG + chr5_1:16163835-16163854 None:intergenic 35.0%
!!! AATTTCAGGTTTTTCTGCTG+AGG + chr5_1:16163836-16163855 None:intergenic 35.0%
TGAGGTACAGATAGAATTTC+AGG + chr5_1:16163850-16163869 None:intergenic 35.0%
AGCATCTGCAAATGTTATGA+AGG - chr5_1:16163876-16163895 Msa0720240:intron 35.0%
TCTGCAAATGTTATGAAGGA+TGG - chr5_1:16163880-16163899 Msa0720240:intron 35.0%
ATAACATCTGCTTGAGAAGT+CGG + chr5_1:16163928-16163947 None:intergenic 35.0%
! ATACTTTTAGGCACAATCTC+TGG + chr5_1:16163973-16163992 None:intergenic 35.0%
ATAAATCCATCATCTGTCTC+GGG + chr5_1:16164027-16164046 None:intergenic 35.0%
CATAAATCCATCATCTGTCT+CGG + chr5_1:16164028-16164047 None:intergenic 35.0%
! TGGATCATTACCCATTGATT+TGG - chr5_1:16164062-16164081 Msa0720240:intron 35.0%
TCTGGATATTTCGTCAATGT+TGG + chr5_1:16164181-16164200 None:intergenic 35.0%
AACATTGACGAAATATCCAG+AGG - chr5_1:16164180-16164199 Msa0720240:intron 35.0%
ACATTGACGAAATATCCAGA+GGG - chr5_1:16164181-16164200 Msa0720240:intron 35.0%
ATTACCTTGGACAGTATGAA+AGG + chr5_1:16164334-16164353 None:intergenic 35.0%
!!! CTTGTGTATTTTTTGGGTCA+GGG + chr5_1:16164357-16164376 None:intergenic 35.0%
!!! ACTTGTGTATTTTTTGGGTC+AGG + chr5_1:16164358-16164377 None:intergenic 35.0%
ATACCAAACGAAAAGCTTCT+TGG + chr5_1:16164419-16164438 None:intergenic 35.0%
ACCTGTTCTTCCAATGTTAT+AGG - chr5_1:16164588-16164607 Msa0720240:intron 35.0%
TCCTATAACATTGGAAGAAC+AGG + chr5_1:16164592-16164611 None:intergenic 35.0%
TTGAAGATTTACACAAGGAC+AGG - chr5_1:16164757-16164776 Msa0720240:CDS 35.0%
ACATTACTCTGTTTAGTTGC+TGG - chr5_1:16164806-16164825 Msa0720240:CDS 35.0%
!! CTTCTTGTGTAACTGATTTG+TGG - chr5_1:16164835-16164854 Msa0720240:CDS 35.0%
GGGGTGAAATAAGTATCAAT+AGG + chr5_1:16164928-16164947 None:intergenic 35.0%
! ATCCATTGTCTGTCTAAAAC+AGG - chr5_1:16165061-16165080 Msa0720240:five_prime_UTR 35.0%
!! TACCTGTTTTAGACAGACAA+TGG + chr5_1:16165066-16165085 None:intergenic 35.0%
!! ATTGATTTTGTGTGTGGGGT+GGG + chr5_1:16160294-16160313 None:intergenic 40.0%
!!! TATTGATTTTGTGTGTGGGG+TGG + chr5_1:16160295-16160314 None:intergenic 40.0%
GAATAGGGGACAAGAGATTA+TGG + chr5_1:16160321-16160340 None:intergenic 40.0%
TGAACTTGAAGGGAGAATAG+GGG + chr5_1:16160335-16160354 None:intergenic 40.0%
GAGCAAAACTTATGACATGG+TGG - chr5_1:16160537-16160556 Msa0720240:three_prime_UTR 40.0%
GAAACTATCGCATCTGTTGA+AGG + chr5_1:16160568-16160587 None:intergenic 40.0%
CAACAGATGCGATAGTTTCA+TGG - chr5_1:16160569-16160588 Msa0720240:three_prime_UTR 40.0%
CCAAACAACGAAACTGTTGT+TGG + chr5_1:16160602-16160621 None:intergenic 40.0%
CCAACAACAGTTTCGTTGTT+TGG - chr5_1:16160599-16160618 Msa0720240:three_prime_UTR 40.0%
TTCTTCGAGTGAAATGGTGA+CGG - chr5_1:16161291-16161310 Msa0720240:CDS 40.0%
TTACTTTCACGGTTCAGTTG+AGG + chr5_1:16161443-16161462 None:intergenic 40.0%
TCAACTGAACCGTGAAAGTA+AGG - chr5_1:16161442-16161461 Msa0720240:CDS 40.0%
TAGTTGCTGACAATGTAGGA+GGG + chr5_1:16161579-16161598 None:intergenic 40.0%
CATCTAGTTGCTGACAATGT+AGG + chr5_1:16161583-16161602 None:intergenic 40.0%
CTACATTGTCAGCAACTAGA+TGG - chr5_1:16161581-16161600 Msa0720240:CDS 40.0%
CTGCATTCAATACGCCAAAA+TGG - chr5_1:16162234-16162253 Msa0720240:CDS 40.0%
CATTCAATACGCCAAAATGG+TGG - chr5_1:16162237-16162256 Msa0720240:CDS 40.0%
! AATCAACTGGGCTTTTCACA+AGG + chr5_1:16162422-16162441 None:intergenic 40.0%
! ACTAGTTTCCTGAACACTCT+TGG - chr5_1:16162474-16162493 Msa0720240:intron 40.0%
CTAGTTTCCTGAACACTCTT+GGG - chr5_1:16162475-16162494 Msa0720240:intron 40.0%
GTTAAACTGATCTGCAGAGA+AGG + chr5_1:16162539-16162558 None:intergenic 40.0%
GGCAAATCCATTGATACACA+TGG - chr5_1:16162612-16162631 Msa0720240:intron 40.0%
! GTGTTGCTCAATTTATCCTC+AGG - chr5_1:16162713-16162732 Msa0720240:intron 40.0%
!! TGGACATAAGACTTTTGGGA+TGG - chr5_1:16162745-16162764 Msa0720240:intron 40.0%
AATTCTTCCCTCTTCAAACC+TGG - chr5_1:16162857-16162876 Msa0720240:intron 40.0%
TTTCAAACAGGGTTTCAGGA+AGG - chr5_1:16163063-16163082 Msa0720240:intron 40.0%
TTGCAAATTCCCAACGATCT+GGG + chr5_1:16163093-16163112 None:intergenic 40.0%
TTTGCAAATTCCCAACGATC+TGG + chr5_1:16163094-16163113 None:intergenic 40.0%
TCGTTGGGAATTTGCAAATG+AGG - chr5_1:16163096-16163115 Msa0720240:intron 40.0%
CGTTGGGAATTTGCAAATGA+GGG - chr5_1:16163097-16163116 Msa0720240:intron 40.0%
! TTGCAAATGAGGGCTTTTTG+AGG - chr5_1:16163107-16163126 Msa0720240:intron 40.0%
! TGCAAATGAGGGCTTTTTGA+GGG - chr5_1:16163108-16163127 Msa0720240:intron 40.0%
CTGTTGTTGAGTATGACCAT+GGG + chr5_1:16163176-16163195 None:intergenic 40.0%
ATGGACAGAGTTCATCAGTA+GGG - chr5_1:16163209-16163228 Msa0720240:intron 40.0%
TGTGTAGAAGTCGGCAAATT+TGG - chr5_1:16163235-16163254 Msa0720240:intron 40.0%
GTGTAGAAGTCGGCAAATTT+GGG - chr5_1:16163236-16163255 Msa0720240:intron 40.0%
CAAACTGAGCAAAGAAACCA+GGG + chr5_1:16163441-16163460 None:intergenic 40.0%
ACAAACTGAGCAAAGAAACC+AGG + chr5_1:16163442-16163461 None:intergenic 40.0%
! CTGAAGTCAACAAAAAGCGT+CGG - chr5_1:16163494-16163513 Msa0720240:intron 40.0%
AACAATTTGTCCATCAGGAG+GGG + chr5_1:16163560-16163579 None:intergenic 40.0%
ACTCAAATTCCAGTGTCAAC+AGG - chr5_1:16163793-16163812 Msa0720240:intron 40.0%
CTCAAATTCCAGTGTCAACA+GGG - chr5_1:16163794-16163813 Msa0720240:intron 40.0%
!!! TTTCAGGTTTTTCTGCTGAG+GGG + chr5_1:16163834-16163853 None:intergenic 40.0%
TAACATCTGCTTGAGAAGTC+GGG + chr5_1:16163927-16163946 None:intergenic 40.0%
! TCTGGTACTGAAGGTATATC+AGG + chr5_1:16163955-16163974 None:intergenic 40.0%
GGAGCCATATAATTGTCTTC+AGG + chr5_1:16164006-16164025 None:intergenic 40.0%
!! CGAGACAGATGATGGATTTA+TGG - chr5_1:16164026-16164045 Msa0720240:intron 40.0%
TTTATGGATCCGAGTTCACT+TGG - chr5_1:16164042-16164061 Msa0720240:intron 40.0%
GGTAATGATCCAAGTGAACT+CGG + chr5_1:16164054-16164073 None:intergenic 40.0%
GATTTGGATTGTCTTTCACC+CGG - chr5_1:16164078-16164097 Msa0720240:intron 40.0%
AAATCATCAATGTCTGCACC+GGG + chr5_1:16164099-16164118 None:intergenic 40.0%
CAAATCATCAATGTCTGCAC+CGG + chr5_1:16164100-16164119 None:intergenic 40.0%
! TCCAATTCCAGAGGATTTTG+AGG - chr5_1:16164155-16164174 Msa0720240:intron 40.0%
GATCAACTAACAGAGCAGAT+GGG - chr5_1:16164255-16164274 Msa0720240:intron 40.0%
TTGACCTTTCATACTGTCCA+AGG - chr5_1:16164327-16164346 Msa0720240:intron 40.0%
AAAGCTTCTTGGTGAGCAAA+TGG + chr5_1:16164408-16164427 None:intergenic 40.0%
! TCACCAAGAAGCTTTTCGTT+TGG - chr5_1:16164413-16164432 Msa0720240:intron 40.0%
TAACATTGGAAGAACAGGTC+AGG + chr5_1:16164587-16164606 None:intergenic 40.0%
! ACCAAGGAAACATCAAGTTG+GGG + chr5_1:16164660-16164679 None:intergenic 40.0%
CACCAAGGAAACATCAAGTT+GGG + chr5_1:16164661-16164680 None:intergenic 40.0%
TCACCAAGGAAACATCAAGT+TGG + chr5_1:16164662-16164681 None:intergenic 40.0%
ACTTGATGTTTCCTTGGTGA+TGG - chr5_1:16164662-16164681 Msa0720240:intron 40.0%
! CTTGATGTTTCCTTGGTGAT+GGG - chr5_1:16164663-16164682 Msa0720240:intron 40.0%
!! TTCCTTGGTGATGGGAAAAA+TGG - chr5_1:16164671-16164690 Msa0720240:intron 40.0%
!! TCCTTGGTGATGGGAAAAAT+GGG - chr5_1:16164672-16164691 Msa0720240:intron 40.0%
TTACACAAGGACAGGAACAT+TGG - chr5_1:16164765-16164784 Msa0720240:CDS 40.0%
! CTGATTTGTGGTGCTTCAAT+TGG - chr5_1:16164847-16164866 Msa0720240:CDS 40.0%
TGGAATTGAATGCCACTAGA+TGG - chr5_1:16164895-16164914 Msa0720240:CDS 40.0%
TTGAATGCCACTAGATGGAA+TGG - chr5_1:16164900-16164919 Msa0720240:CDS 40.0%
ATAGGTACCATTCCATCTAG+TGG + chr5_1:16164910-16164929 None:intergenic 40.0%
! TTGATTTTGTGTGTGGGGTG+GGG + chr5_1:16160293-16160312 None:intergenic 45.0%
TTCGAAATGGATGGAGCAAG+CGG - chr5_1:16160442-16160461 Msa0720240:three_prime_UTR 45.0%
! GTTTTGCTCAAAAACGGTGG+CGG + chr5_1:16160526-16160545 None:intergenic 45.0%
AAAAGGTCCCTAGCGAATTC+GGG + chr5_1:16160631-16160650 None:intergenic 45.0%
CAAAAGGTCCCTAGCGAATT+CGG + chr5_1:16160632-16160651 None:intergenic 45.0%
GCTTGAAGAACTTCGGCAAA+AGG + chr5_1:16160648-16160667 None:intergenic 45.0%
ATGAGGACTGAGTGGAAAGA+TGG - chr5_1:16161015-16161034 Msa0720240:intron 45.0%
!! AATGTCGGTGGTGCTACAAA+GGG + chr5_1:16161046-16161065 None:intergenic 45.0%
!! AAATGTCGGTGGTGCTACAA+AGG + chr5_1:16161047-16161066 None:intergenic 45.0%
ACGCCTTCCATCAGAAATGT+CGG + chr5_1:16161061-16161080 None:intergenic 45.0%
CACTGAACAAGACAAGGACA+GGG + chr5_1:16161174-16161193 None:intergenic 45.0%
ACACTGAACAAGACAAGGAC+AGG + chr5_1:16161175-16161194 None:intergenic 45.0%
CACTGACACTGAACAAGACA+AGG + chr5_1:16161180-16161199 None:intergenic 45.0%
GTTCAGTGTCAGTGCTTCAT+AGG - chr5_1:16161186-16161205 Msa0720240:CDS 45.0%
CCACACCAAATCAGTGTGTA+CGG + chr5_1:16161387-16161406 None:intergenic 45.0%
CTAGTTGCTGACAATGTAGG+AGG + chr5_1:16161580-16161599 None:intergenic 45.0%
CAACTAGATGGAGCAGAAGA+GGG - chr5_1:16161593-16161612 Msa0720240:CDS 45.0%
AACATGTCCCTCGCAATACA+GGG + chr5_1:16161805-16161824 None:intergenic 45.0%
AAACATGTCCCTCGCAATAC+AGG + chr5_1:16161806-16161825 None:intergenic 45.0%
CCTCTTAAAAAAGGACAGCC+CGG + chr5_1:16162304-16162323 None:intergenic 45.0%
TTATCCTCAGGCTCAGTTTC+TGG - chr5_1:16162725-16162744 Msa0720240:intron 45.0%
ACTCAATTTGGTTGGGTGAC+TGG - chr5_1:16162794-16162813 Msa0720240:intron 45.0%
ATTCTGGCCAGGTTTGAAGA+GGG + chr5_1:16162867-16162886 None:intergenic 45.0%
AATTCTGGCCAGGTTTGAAG+AGG + chr5_1:16162868-16162887 None:intergenic 45.0%
TTACACACTCAATTCTGGCC+AGG + chr5_1:16162878-16162897 None:intergenic 45.0%
!! GCAAATGAGGGCTTTTTGAG+GGG - chr5_1:16163109-16163128 Msa0720240:intron 45.0%
CCTGTTGTTGAGTATGACCA+TGG + chr5_1:16163177-16163196 None:intergenic 45.0%
CCATGGTCATACTCAACAAC+AGG - chr5_1:16163174-16163193 Msa0720240:intron 45.0%
ACTGATGAACTCTGTCCATG+CGG + chr5_1:16163208-16163227 None:intergenic 45.0%
CATGGACAGAGTTCATCAGT+AGG - chr5_1:16163208-16163227 Msa0720240:intron 45.0%
TGGACAGAGTTCATCAGTAG+GGG - chr5_1:16163210-16163229 Msa0720240:intron 45.0%
CAAATTTGGGCTTGAGGAAG+AGG - chr5_1:16163249-16163268 Msa0720240:intron 45.0%
TTCTCATGCAAGAGCTTGTG+AGG - chr5_1:16163299-16163318 Msa0720240:intron 45.0%
!! AAAGAAACCAGGGCTTTGGA+CGG + chr5_1:16163431-16163450 None:intergenic 45.0%
TACTTCACCATCCAGTGCAA+TGG - chr5_1:16163699-16163718 Msa0720240:intron 45.0%
! ACAGTAGTAGCTCTACAAGC+TGG - chr5_1:16163722-16163741 Msa0720240:intron 45.0%
! TAGCTCTACAAGCTGGAACT+CGG - chr5_1:16163729-16163748 Msa0720240:intron 45.0%
TGAGTAGACTGCACTGAAGA+TGG + chr5_1:16163778-16163797 None:intergenic 45.0%
TCTGCAAACTCCAATTCCAG+AGG - chr5_1:16164146-16164165 Msa0720240:intron 45.0%
!! GCCTCAAAATCCTCTGGAAT+TGG + chr5_1:16164159-16164178 None:intergenic 45.0%
! ATGTTGGCCTCAAAATCCTC+TGG + chr5_1:16164165-16164184 None:intergenic 45.0%
CGAAATATCCAGAGGGAATG+AGG - chr5_1:16164188-16164207 Msa0720240:intron 45.0%
!! TTGTCCCAGCCATTTTCTGT+TGG + chr5_1:16164219-16164238 None:intergenic 45.0%
TGCTCTGTTAGTTGATCCAG+GGG + chr5_1:16164252-16164271 None:intergenic 45.0%
CTGCTCTGTTAGTTGATCCA+GGG + chr5_1:16164253-16164272 None:intergenic 45.0%
TCTGCTCTGTTAGTTGATCC+AGG + chr5_1:16164254-16164273 None:intergenic 45.0%
GGATCAACTAACAGAGCAGA+TGG - chr5_1:16164254-16164273 Msa0720240:intron 45.0%
!! TTTTGGGTCAGGGATTACCT+TGG + chr5_1:16164347-16164366 None:intergenic 45.0%
TCCCCAACTTGATGTTTCCT+TGG - chr5_1:16164656-16164675 Msa0720240:intron 45.0%
!! TCCCATTTTTCCCATCACCA+AGG + chr5_1:16164676-16164695 None:intergenic 45.0%
GTGCACTTGTCAGACACTTT+GGG + chr5_1:16164724-16164743 None:intergenic 45.0%
!!! ACAATAATTTTTTTTTTTTT+GGG - chr5_1:16161223-16161242 Msa0720240:CDS 5.0%
! TGATTTTGTGTGTGGGGTGG+GGG + chr5_1:16160292-16160311 None:intergenic 50.0%
GGGTTCAACCACCCAAATAC+CGG - chr5_1:16160471-16160490 Msa0720240:three_prime_UTR 50.0%
!! TTCGCGTTTAGCATCGGTGT+CGG + chr5_1:16160499-16160518 None:intergenic 50.0%
AGCACCACCGACATTTCTGA+TGG - chr5_1:16161051-16161070 Msa0720240:intron 50.0%
CCTTCCATCAGAAATGTCGG+TGG + chr5_1:16161058-16161077 None:intergenic 50.0%
CCACCGACATTTCTGATGGA+AGG - chr5_1:16161055-16161074 Msa0720240:intron 50.0%
! TTTCTGATGGAAGGCGTGTC+CGG - chr5_1:16161064-16161083 Msa0720240:three_prime_UTR 50.0%
AGGACAGGGTACATCAACGA+TGG + chr5_1:16161160-16161179 None:intergenic 50.0%
TGTGGTTATAAGGGGGAGAC+AGG - chr5_1:16161351-16161370 Msa0720240:CDS 50.0%
CAAATCAGTGTGTACGGCGA+AGG + chr5_1:16161381-16161400 None:intergenic 50.0%
! CTTCGCCGTACACACTGATT+TGG - chr5_1:16161379-16161398 Msa0720240:CDS 50.0%
!! CCGTACACACTGATTTGGTG+TGG - chr5_1:16161384-16161403 Msa0720240:CDS 50.0%
GCAACTAGATGGAGCAGAAG+AGG - chr5_1:16161592-16161611 Msa0720240:CDS 50.0%
! GTATTGGCCCTGTATTGCGA+GGG - chr5_1:16161795-16161814 Msa0720240:CDS 50.0%
ACTAAAGCTCCTGCAAACGC+AGG + chr5_1:16162278-16162297 None:intergenic 50.0%
! TTGCAGGAGCTTTAGTGCAC+CGG - chr5_1:16162282-16162301 Msa0720240:CDS 50.0%
!!! CCGGGCTGTCCTTTTTTAAG+AGG - chr5_1:16162301-16162320 Msa0720240:CDS 50.0%
TTCCTGAACACTCTTGGGTG+TGG - chr5_1:16162480-16162499 Msa0720240:intron 50.0%
!! TTCCACACCCAAGAGTGTTC+AGG + chr5_1:16162485-16162504 None:intergenic 50.0%
ATGTCCAGAAACTGAGCCTG+AGG + chr5_1:16162732-16162751 None:intergenic 50.0%
GAAGGTTGACCCAGATCGTT+GGG - chr5_1:16163081-16163100 Msa0720240:intron 50.0%
AGTCGAAGAAAACCTGCCCA+TGG - chr5_1:16163157-16163176 Msa0720240:intron 50.0%
TGTTGAGTATGACCATGGGC+AGG + chr5_1:16163172-16163191 None:intergenic 50.0%
! GTAGGGGCATGTGTAGAAGT+CGG - chr5_1:16163226-16163245 Msa0720240:intron 50.0%
AGTCGGCAAATTTGGGCTTG+AGG - chr5_1:16163243-16163262 Msa0720240:intron 50.0%
CAGCAGCAACAAACCACTGA+CGG - chr5_1:16163328-16163347 Msa0720240:intron 50.0%
GCTGAACCATTGTTTGCAGC+TGG + chr5_1:16163354-16163373 None:intergenic 50.0%
ACAATGGTTCAGCGCCTTCA+AGG - chr5_1:16163361-16163380 Msa0720240:intron 50.0%
GTCGTTGCTCCATTCCTTGA+AGG + chr5_1:16163378-16163397 None:intergenic 50.0%
GAGCAAAGAAACCAGGGCTT+TGG + chr5_1:16163435-16163454 None:intergenic 50.0%
CTACTGTCCATTGCACTGGA+TGG + chr5_1:16163709-16163728 None:intergenic 50.0%
GCTACTACTGTCCATTGCAC+TGG + chr5_1:16163713-16163732 None:intergenic 50.0%
AGCTCTACAAGCTGGAACTC+GGG - chr5_1:16163730-16163749 Msa0720240:intron 50.0%
CTCGGGAGTAACTCTTCAAG+AGG - chr5_1:16163747-16163766 Msa0720240:intron 50.0%
GTAGACTGCACTGAAGATGG+AGG + chr5_1:16163775-16163794 None:intergenic 50.0%
TTTGCAGATGCTGCAGCTTG+AGG + chr5_1:16163868-16163887 None:intergenic 50.0%
! GGCACAATCTCTGGTACTGA+AGG + chr5_1:16163964-16163983 None:intergenic 50.0%
GAGGTGCAGCCAACAGAAAA+TGG - chr5_1:16164207-16164226 Msa0720240:intron 50.0%
TGCAGCCAACAGAAAATGGC+TGG - chr5_1:16164211-16164230 Msa0720240:intron 50.0%
GCAGCCAACAGAAAATGGCT+GGG - chr5_1:16164212-16164231 Msa0720240:intron 50.0%
GGACAATAATACTCAGCCCC+TGG - chr5_1:16164233-16164252 Msa0720240:intron 50.0%
GCTTCTTGGTGAGCAAATGG+AGG + chr5_1:16164405-16164424 None:intergenic 50.0%
CGTGCACTTGTCAGACACTT+TGG + chr5_1:16164725-16164744 None:intergenic 50.0%
AGTGTCTGACAAGTGCACGT+TGG - chr5_1:16164726-16164745 Msa0720240:CDS 50.0%
GAAATGGATGGAGCAAGCGG+CGG - chr5_1:16160445-16160464 Msa0720240:three_prime_UTR 55.0%
GTCCGGTATCTGACACGTGT+CGG - chr5_1:16161081-16161100 Msa0720240:exon 55.0%
CACCGACACGTGTCAGATAC+CGG + chr5_1:16161086-16161105 None:intergenic 55.0%
!! GGTATTGGCCCTGTATTGCG+AGG - chr5_1:16161794-16161813 Msa0720240:CDS 55.0%
! AAAATGGTGGGACCCCTTCC+CGG - chr5_1:16162250-16162269 Msa0720240:CDS 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG - chr5_1:16162283-16162302 Msa0720240:CDS 55.0%
GGAAGGTTGACCCAGATCGT+TGG - chr5_1:16163080-16163099 Msa0720240:intron 55.0%
GGCTTGAGGAAGAGGTTGAG+AGG - chr5_1:16163257-16163276 Msa0720240:intron 55.0%
TGACGGCCAGCTGCAAACAA+TGG - chr5_1:16163345-16163364 Msa0720240:intron 55.0%
GGTTCAGCGCCTTCAAGGAA+TGG - chr5_1:16163366-16163385 Msa0720240:intron 55.0%
!! CAAAAAGCGTCGGCTCAAGC+AGG - chr5_1:16163504-16163523 Msa0720240:intron 55.0%
CCTTGAGTCCCTGTTGACAC+TGG + chr5_1:16163805-16163824 None:intergenic 55.0%
CCAGTGTCAACAGGGACTCA+AGG - chr5_1:16163802-16163821 Msa0720240:intron 55.0%
ATGGCTCCCGAGACAGATGA+TGG - chr5_1:16164018-16164037 Msa0720240:intron 55.0%
TTTGTGTGTGGGGTGGGGGA+GGG + chr5_1:16160288-16160307 None:intergenic 60.0%
! TTTTGTGTGTGGGGTGGGGG+AGG + chr5_1:16160289-16160308 None:intergenic 60.0%
!! TTTAGCATCGGTGTCGGCGC+CGG + chr5_1:16160493-16160512 None:intergenic 60.0%
GGCGCGTTCGCGTTTAGCAT+CGG + chr5_1:16160505-16160524 None:intergenic 60.0%
GGACCCACCCGAATTCGCTA+GGG - chr5_1:16160621-16160640 Msa0720240:three_prime_UTR 60.0%
GGTCCCTAGCGAATTCGGGT+GGG + chr5_1:16160627-16160646 None:intergenic 60.0%
AGGTCCCTAGCGAATTCGGG+TGG + chr5_1:16160628-16160647 None:intergenic 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr5_1:16162251-16162270 None:intergenic 60.0%
CAAACGCAGGATCCGGGAAG+GGG + chr5_1:16162265-16162284 None:intergenic 60.0%
GCAAACGCAGGATCCGGGAA+GGG + chr5_1:16162266-16162285 None:intergenic 60.0%
TGCAAACGCAGGATCCGGGA+AGG + chr5_1:16162267-16162286 None:intergenic 60.0%
TTCCCGGATCCTGCGTTTGC+AGG - chr5_1:16162266-16162285 Msa0720240:CDS 60.0%
CTCCTGCAAACGCAGGATCC+GGG + chr5_1:16162271-16162290 None:intergenic 60.0%
GCTCCTGCAAACGCAGGATC+CGG + chr5_1:16162272-16162291 None:intergenic 60.0%
CAACAGGCTCAGCAACCGCA+TGG - chr5_1:16163190-16163209 Msa0720240:intron 60.0%
TGTTTGCAGCTGGCCGTCAG+TGG + chr5_1:16163344-16163363 None:intergenic 60.0%
!! GGCTTTGGACGGCTTTGGCA+AGG + chr5_1:16163420-16163439 None:intergenic 60.0%
!! ACCAGGGCTTTGGACGGCTT+TGG + chr5_1:16163425-16163444 None:intergenic 60.0%
!! AAGCGTCGGCTCAAGCAGGA+TGG - chr5_1:16163508-16163527 Msa0720240:intron 60.0%
GAGCAAGCTACCCCTCCTGA+TGG - chr5_1:16163547-16163566 Msa0720240:intron 60.0%
TGGCTGCACCTCATTCCCTC+TGG + chr5_1:16164199-16164218 None:intergenic 60.0%
GATGGAGCAAGCGGCGGAGA+GGG - chr5_1:16160451-16160470 Msa0720240:three_prime_UTR 65.0%
!! TGTCGGCGCCGGTATTTGGG+TGG + chr5_1:16160482-16160501 None:intergenic 65.0%
!! CGGTGTCGGCGCCGGTATTT+GGG + chr5_1:16160485-16160504 None:intergenic 65.0%
!! TCGGTGTCGGCGCCGGTATT+TGG + chr5_1:16160486-16160505 None:intergenic 65.0%
GGGACCCACCCGAATTCGCT+AGG - chr5_1:16160620-16160639 Msa0720240:three_prime_UTR 65.0%
GCCAAAGCCGTCCAAAGCCC+TGG - chr5_1:16163421-16163440 Msa0720240:intron 65.0%
GTGGGGTGGGGGAGGGAGTA+TGG + chr5_1:16160281-16160300 None:intergenic 70.0%
GGATGGAGCAAGCGGCGGAG+AGG - chr5_1:16160450-16160469 Msa0720240:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 16160277 16165130 16160277 ID=Msa0720240;Name=Msa0720240
chr5_1 mRNA 16160277 16165130 16160277 ID=Msa0720240-mRNA-1;Parent=Msa0720240;Name=Msa0720240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=171|1|1|1|0.5|0.33|3|561|498
chr5_1 exon 16160277 16160797 16160277 ID=Msa0720240-mRNA-1:exon:6171;Parent=Msa0720240-mRNA-1
chr5_1 exon 16161059 16162334 16161059 ID=Msa0720240-mRNA-1:exon:6170;Parent=Msa0720240-mRNA-1
chr5_1 exon 16164699 16165130 16164699 ID=Msa0720240-mRNA-1:exon:6169;Parent=Msa0720240-mRNA-1
chr5_1 five_prime_UTR 16164960 16165130 16164960 ID=Msa0720240-mRNA-1:five_prime_utr;Parent=Msa0720240-mRNA-1
chr5_1 CDS 16164699 16164959 16164699 ID=Msa0720240-mRNA-1:cds;Parent=Msa0720240-mRNA-1
chr5_1 CDS 16161099 16162334 16161099 ID=Msa0720240-mRNA-1:cds;Parent=Msa0720240-mRNA-1
chr5_1 three_prime_UTR 16161059 16161098 16161059 ID=Msa0720240-mRNA-1:three_prime_utr;Parent=Msa0720240-mRNA-1
chr5_1 three_prime_UTR 16160277 16160797 16160277 ID=Msa0720240-mRNA-1:three_prime_utr;Parent=Msa0720240-mRNA-1
Gene Sequence

>Msa0720240

ATGGATGGAGCAAGCGGCGGAGAGGGTTCAACCACCCAAATACCGGCGCCGACACCGATGCTAAACGCGAACGCGCCGCCACCGTTTTTGAGCAAAACTTATGACATGGTGGATGATCCTTCAACAGATGCGATAGTTTCATGGAGCGCAACCAACAACAGTTTCGTTGTTTGGGACCCACCCGAATTCGCTAGGGACCTTTTGCCGAAGTTCTTCAAGCATAACAATTTCTCAAGCTTTGTGAGACAGTTGAATACTTATGGTTTCAGGAAGGTTGACCCAGATCGTTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCAATTGCTTAAGAGTATTAGTCGAAGAAAACCTGCCCATGGTCATACTCAACAACAGGCTCAGCAACCGCATGGACAGAGTTCATCAGTAGGGGCATGTGTAGAAGTCGGCAAATTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTTCTCATGCAAGAGCTTGTGAGGTTGAGACAGCAGCAACAAACCACTGACGGCCAGCTGCAAACAATGGTTCAGCGCCTTCAAGGAATGGAGCAACGACAACAGCAAATGATGTCATTCCTTGCCAAAGCCGTCCAAAGCCCTGGTTTCTTTGCTCAGTTTGTGCAACAACAAAATGACAGCAATAGGCGCATTACTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGATGGTATTGCTGAAACAACAGAGCAAGCTACCCCTCCTGATGGACAAATTGTTAAATATCAACCTATGATGAATGAAACAGCAAAAGCAATGCTAAGGAAGATCATGAAATGGGATTCTCCGCGTGTAGAATCTTTCAATAAAAACCCTGATAATTACTTGATTGGTGATGGTACTTCACCATCCAGTGCAATGGACAGTAGTAGCTCTACAAGCTGGAACTCGGGAGTAACTCTTCAAGAGGTTCCTCCATCTTCAGTGCAGTCTACTCAAATTCCAGTGTCAACAGGGACTCAAGGACACATCCCCTCAGCAGAAAAACCTGAAATTCTATCTGTACCTCAAGCTGCAGCATCTGCAAATGTTATGAAGGATGGAACACATGCAGCATCGACTATCCCGACTTCTCAAGCAGATGTTATAATGCCTGATATACCTTCAGTACCAGAGATTGTGCCTAAAAGTATTCTTGATATACCTGAAGACAATTATATGGCTCCCGAGACAGATGATGGATTTATGGATCCGAGTTCACTTGGATCATTACCCATTGATTTGGATTGTCTTTCACCCGGTGCAGACATTGATGATTTGTTAAGCAATTCTATTTGGGATGATCTTCTGCAAACTCCAATTCCAGAGGATTTTGAGGCCAACATTGACGAAATATCCAGAGGGAATGAGGTGCAGCCAACAGAAAATGGCTGGGACAATAATACTCAGCCCCTGGATCAACTAACAGAGCAGATGGGTCTTCTTTCTTCTGATGCCAAAAGAATTTAA
Protein sequence

>Msa0720240

MDGASGGEGSTTQIPAPTPMLNANAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSISRRKPAHGHTQQQAQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDGQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQDGIAETTEQATPPDGQIVKYQPMMNETAKAMLRKIMKWDSPRVESFNKNPDNYLIGDGTSPSSAMDSSSSTSWNSGVTLQEVPPSSVQSTQIPVSTGTQGHIPSAEKPEILSVPQAAASANVMKDGTHAASTIPTSQADVIMPDIPSVPEIVPKSILDIPEDNYMAPETDDGFMDPSSLGSLPIDLDCLSPGADIDDLLSNSIWDDLLQTPIPEDFEANIDEISRGNEVQPTENGWDNNTQPLDQLTEQMGLLSSDAKRI*