AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0721290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721290 MtrunA17_Chr5g0433301 96.292 863 10 1 1 863 1 841 0.0 1710
Msa0721290 MtrunA17_Chr3g0109391 80.114 875 136 13 1 863 1 849 0.0 1348
Msa0721290 MtrunA17_Chr2g0285461 57.388 934 301 21 1 863 1 908 0.0 911
Msa0721290 MtrunA17_Chr8g0376771 73.450 516 103 11 1 512 1 486 0.0 731
Msa0721290 MtrunA17_Chr1g0156321 43.330 877 395 24 16 842 35 859 0.0 592
Msa0721290 MtrunA17_Chr4g0070181 63.341 431 132 8 16 444 15 421 3.92e-168 518
Msa0721290 MtrunA17_Chr4g0070181 50.459 109 54 0 717 825 974 1082 3.62e-29 125
Msa0721290 MtrunA17_Chr2g0301251 70.027 367 104 6 1 366 1 362 8.51e-165 509
Msa0721290 MtrunA17_Chr2g0301251 59.341 91 37 0 739 829 988 1078 1.10e-29 127
Msa0721290 MtrunA17_Chr8g0389081 69.591 342 102 2 21 361 29 369 1.90e-152 476
Msa0721290 MtrunA17_Chr8g0389081 63.218 87 32 0 739 825 987 1073 1.99e-30 129
Msa0721290 MtrunA17_Chr2g0276781 54.391 353 152 4 15 364 14 360 9.84e-125 391
Msa0721290 MtrunA17_Chr2g0276781 35.135 111 68 3 716 825 528 635 6.53e-14 75.9
Msa0721290 MtrunA17_Chr8g0385791 51.467 375 175 4 6 380 43 410 1.72e-122 390
Msa0721290 MtrunA17_Chr8g0385791 44.828 87 46 2 740 825 713 798 9.67e-16 82.0
Msa0721290 MtrunA17_Chr8g0346711 48.469 392 186 6 3 383 8 394 1.02e-117 372
Msa0721290 MtrunA17_Chr8g0346711 41.772 79 44 1 747 825 569 645 6.47e-14 75.9
Msa0721290 MtrunA17_Chr2g0326281 44.773 440 195 9 24 418 56 492 3.47e-111 360
Msa0721290 MtrunA17_Chr2g0326281 35.971 139 82 4 692 825 647 783 2.33e-19 93.6
Msa0721290 MtrunA17_Chr4g0029671 50.137 365 168 6 24 377 54 415 4.98e-111 358
Msa0721290 MtrunA17_Chr4g0029671 44.186 86 46 2 741 825 667 751 2.01e-17 87.4
Msa0721290 MtrunA17_Chr4g0009751 50.829 362 168 7 20 377 15 370 2.09e-110 352
Msa0721290 MtrunA17_Chr4g0046371 47.872 376 170 6 15 376 31 394 5.16e-109 350
Msa0721290 MtrunA17_Chr2g0282961 48.800 375 154 7 20 376 51 405 1.86e-108 346
Msa0721290 MtrunA17_Chr7g0239061 48.238 369 182 7 15 380 5 367 2.36e-108 348
Msa0721290 MtrunA17_Chr7g0239061 41.772 79 44 1 747 825 581 657 3.35e-14 76.6
Msa0721290 MtrunA17_Chr2g0326761 40.887 406 188 9 18 380 5 401 1.49e-84 285
Msa0721290 MtrunA17_Chr1g0199681 39.642 391 189 8 14 366 84 465 3.64e-82 278
Msa0721290 MtrunA17_Chr4g0028971 39.494 395 183 8 17 365 5 389 1.69e-79 271
Msa0721290 MtrunA17_Chr1g0181211 35.980 403 184 6 18 364 21 405 2.64e-76 262
Msa0721290 MtrunA17_Chr3g0115271 36.154 390 207 6 21 376 16 397 1.49e-65 230
Msa0721290 MtrunA17_Chr7g0264171 35.000 400 199 9 19 367 26 415 8.35e-65 228
Msa0721290 MtrunA17_Chr7g0264161 37.419 310 181 6 33 338 1 301 2.16e-59 204
Msa0721290 MtrunA17_Chr5g0424931 34.021 388 207 10 21 377 16 385 3.00e-57 205
Msa0721290 MtrunA17_Chr5g0417281 32.440 373 223 9 21 385 8 359 1.02e-55 201
Msa0721290 MtrunA17_Chr5g0436761 33.884 363 214 9 17 371 5 349 1.37e-54 196
Msa0721290 MtrunA17_Chr8g0356211 41.850 227 124 5 136 360 2 222 2.01e-53 188
Msa0721290 MtrunA17_Chr1g0178011 31.746 378 228 11 19 386 7 364 1.68e-50 184
Msa0721290 MtrunA17_Chr2g0277461 31.445 353 220 9 24 371 13 348 5.58e-44 166
Msa0721290 MtrunA17_Chr2g0289221 34.146 328 177 12 24 338 20 321 8.09e-44 162
Msa0721290 MtrunA17_Chr5g0417211 31.250 336 183 10 21 338 9 314 3.43e-41 156
Msa0721290 MtrunA17_Chr5g0424741 27.913 369 228 7 21 358 9 370 1.86e-37 148
Msa0721290 MtrunA17_Chr2g0277531 29.712 313 186 11 21 321 17 307 3.02e-34 134
Msa0721290 MtrunA17_Chr5g0424801 29.155 343 222 9 21 358 9 335 5.54e-34 134
Msa0721290 MtrunA17_Chr5g0425661 35.437 206 121 3 23 224 36 233 1.45e-33 129
Msa0721290 MtrunA17_Chr5g0425261 29.155 343 222 9 21 358 9 335 9.01e-33 130
Msa0721290 MtrunA17_Chr5g0419811 45.522 134 50 2 601 711 27 160 7.50e-26 105
Msa0721290 MtrunA17_Chr1g0156301 35.714 154 78 3 692 842 131 266 2.39e-16 80.1
Msa0721290 MtrunA17_Chr5g0424791 34.868 152 84 6 76 224 12 151 1.69e-15 74.7
Msa0721290 MtrunA17_Chr1g0156311 41.593 113 33 2 246 358 1 80 1.64e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721290 AT5G37020.1 66.981 848 220 15 1 834 1 802 0.0 1061
Msa0721290 AT5G37020.2 67.155 819 209 15 1 805 1 773 0.0 1021
Msa0721290 AT5G37020.3 64.447 751 209 14 98 834 1 707 0.0 878
Msa0721290 AT1G19220.1 55.491 519 193 11 1 509 1 491 6.84e-166 511
Msa0721290 AT1G19220.1 55.446 101 45 0 739 839 960 1060 2.22e-29 126
Msa0721290 AT1G19850.2 62.634 372 134 3 11 380 30 398 4.86e-158 485
Msa0721290 AT1G19850.2 53.684 95 44 0 739 833 784 878 2.26e-26 116
Msa0721290 AT1G19850.1 62.634 372 134 3 11 380 41 409 5.59e-158 485
Msa0721290 AT1G19850.1 53.684 95 44 0 739 833 795 889 2.16e-26 116
Msa0721290 AT5G20730.2 67.480 369 114 6 4 370 5 369 3.90e-157 490
Msa0721290 AT5G20730.2 35.887 248 130 7 606 825 879 1125 1.15e-28 124
Msa0721290 AT5G20730.3 67.297 370 114 7 4 370 5 370 1.80e-155 486
Msa0721290 AT5G20730.3 35.887 248 130 7 606 825 880 1126 1.00e-28 124
Msa0721290 AT5G20730.1 67.297 370 114 7 4 370 5 370 3.66e-155 485
Msa0721290 AT5G20730.1 35.887 248 130 7 606 825 880 1126 1.23e-28 124
Msa0721290 AT5G62000.2 54.017 361 161 3 20 380 57 412 2.17e-128 406
Msa0721290 AT5G62000.2 41.414 99 53 3 731 825 724 821 2.63e-15 80.9
Msa0721290 AT5G62000.5 54.017 361 161 3 20 380 57 412 2.17e-128 406
Msa0721290 AT5G62000.5 41.414 99 53 3 731 825 724 821 2.63e-15 80.9
Msa0721290 AT5G62000.3 54.017 361 161 3 20 380 57 412 2.17e-128 406
Msa0721290 AT5G62000.3 41.414 99 53 3 731 825 724 821 2.63e-15 80.9
Msa0721290 AT5G62000.1 54.017 361 161 3 20 380 57 412 2.17e-128 406
Msa0721290 AT5G62000.1 41.414 99 53 3 731 825 724 821 2.63e-15 80.9
Msa0721290 AT5G62000.4 54.017 361 161 3 20 380 57 412 3.27e-128 406
Msa0721290 AT5G62000.4 41.414 99 53 3 731 825 724 821 2.83e-15 80.9
Msa0721290 AT1G59750.2 51.276 392 179 6 8 391 1 388 3.12e-123 387
Msa0721290 AT1G59750.2 39.080 87 51 2 740 825 542 627 2.58e-14 77.4
Msa0721290 AT1G59750.1 51.276 392 179 6 8 391 1 388 3.51e-123 387
Msa0721290 AT1G59750.1 39.080 87 51 2 740 825 545 630 2.68e-14 77.4
Msa0721290 AT1G59750.3 51.276 392 179 6 8 391 1 388 3.51e-123 387
Msa0721290 AT1G59750.3 39.080 87 51 2 740 825 545 630 2.68e-14 77.4
Msa0721290 AT1G59750.4 51.289 388 179 5 8 388 1 385 5.46e-123 386
Msa0721290 AT1G59750.4 39.080 87 51 2 740 825 540 625 2.68e-14 77.4
Msa0721290 AT5G60450.2 52.000 375 166 6 14 378 31 401 1.96e-119 380
Msa0721290 AT5G60450.2 42.391 92 51 2 738 828 642 732 1.05e-18 92.0
Msa0721290 AT5G60450.1 52.717 368 160 6 21 378 62 425 1.62e-118 378
Msa0721290 AT5G60450.1 42.391 92 51 2 738 828 666 756 1.30e-18 91.7
Msa0721290 AT3G61830.1 53.026 347 155 7 21 365 22 362 9.22e-116 365
Msa0721290 AT3G61830.1 41.772 79 44 1 747 825 500 576 2.32e-12 71.2
Msa0721290 AT2G46530.1 50.704 355 168 6 15 368 12 360 1.03e-113 360
Msa0721290 AT2G46530.1 36.364 99 60 2 733 830 486 582 2.63e-12 70.9
Msa0721290 AT2G46530.3 50.704 355 168 6 15 368 33 381 2.43e-113 360
Msa0721290 AT2G46530.3 36.364 99 60 2 733 830 507 603 3.37e-12 70.9
Msa0721290 AT2G33860.1 48.739 357 155 6 16 359 48 389 8.04e-109 347
Msa0721290 AT4G23980.2 48.800 375 168 9 12 377 2 361 9.49e-105 337
Msa0721290 AT4G23980.2 30.131 229 132 11 616 825 389 608 7.34e-15 79.3
Msa0721290 AT4G23980.1 48.800 375 168 9 12 377 2 361 1.22e-104 337
Msa0721290 AT4G23980.1 32.934 167 95 7 668 825 452 610 8.68e-15 79.0
Msa0721290 AT3G61830.2 52.215 316 143 7 52 365 2 311 7.81e-100 322
Msa0721290 AT3G61830.2 41.772 79 44 1 747 825 449 525 1.94e-12 71.2
Msa0721290 AT1G34410.1 42.623 366 191 6 16 376 19 370 4.63e-90 298
Msa0721290 AT1G35540.1 42.450 351 183 6 16 361 19 355 1.28e-87 291
Msa0721290 AT1G35540.1 32.407 108 68 3 721 825 492 597 2.65e-11 67.8
Msa0721290 AT1G35240.1 41.803 366 194 6 16 376 19 370 1.50e-87 290
Msa0721290 AT1G34310.1 42.350 366 192 6 16 376 19 370 1.87e-87 290
Msa0721290 AT1G35520.1 41.600 375 197 7 18 384 21 381 4.45e-85 284
Msa0721290 AT2G33860.2 56.034 232 101 1 128 359 2 232 8.77e-84 276
Msa0721290 AT1G34170.1 42.486 346 186 7 18 360 19 354 3.80e-83 276
Msa0721290 AT1G34390.1 41.379 377 197 8 16 384 19 379 9.10e-81 272
Msa0721290 AT4G30080.1 38.824 425 190 14 14 386 9 415 9.55e-81 274
Msa0721290 AT2G28350.2 39.348 399 177 10 17 364 3 387 9.80e-80 271
Msa0721290 AT2G28350.1 39.348 399 177 10 17 364 3 387 1.20e-79 272
Msa0721290 AT2G46530.2 51.406 249 117 3 120 368 29 273 3.05e-79 266
Msa0721290 AT2G46530.2 36.364 99 60 2 733 830 399 495 1.71e-12 71.2
Msa0721290 AT1G34170.2 39.306 346 171 6 18 360 19 328 5.64e-73 248
Msa0721290 AT1G34170.3 39.306 346 171 6 18 360 19 328 3.06e-72 248
Msa0721290 AT1G77850.1 34.236 406 221 9 21 391 16 410 5.17e-57 206
Msa0721290 AT1G77850.2 34.236 406 221 9 21 391 16 410 5.47e-57 206
Msa0721290 AT1G30330.1 42.105 304 133 6 591 862 617 909 4.94e-55 206
Msa0721290 AT1G30330.3 42.105 304 133 6 591 862 619 911 5.49e-55 206
Msa0721290 AT1G30330.2 42.105 304 133 6 591 862 619 911 5.49e-55 206
Msa0721290 AT1G43950.1 42.396 217 107 5 16 227 19 222 4.56e-48 170

Find 261 sgRNAs with CRISPR-Local

Find 677 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTTCTTCCTATGGAATT+AGG 0.126366 5_1:+17754036 Msa0721290:CDS
CCCCAAACAGAACAGAATTT+TGG 0.138292 5_1:-17760850 None:intergenic
TTTCACTTGGTTTCCTCTTT+TGG 0.156985 5_1:+17752558 Msa0721290:five_prime_UTR
CCCAAAATTCTGTTCTGTTT+GGG 0.157459 5_1:+17760849 Msa0721290:CDS
TTTCTGTCGGTATGCGTTTC+AGG 0.158049 5_1:+17757631 Msa0721290:CDS
GTACACAGCTTTGATATATT+TGG 0.159080 5_1:-17757598 None:intergenic
TCCTGAAGATATTCAGAAAA+TGG 0.166038 5_1:+17761755 Msa0721290:CDS
GAATCTCACGACATTGTTTC+TGG 0.168594 5_1:+17761840 Msa0721290:CDS
TGAAAAGAATCAGCTTCTTT+TGG 0.219750 5_1:+17757319 Msa0721290:CDS
ACAGACCTCCAATGAGAATT+TGG 0.247430 5_1:-17759120 None:intergenic
CTTCTTCAGTTTCATTTCAA+TGG 0.262591 5_1:+17752480 Msa0721290:five_prime_UTR
CGTTTCTTCCTATGGAATTA+GGG 0.270900 5_1:+17754037 Msa0721290:CDS
GCCATGGTCGTTTCAATCTA+AGG 0.278500 5_1:-17759758 None:intergenic
TAACACCATATTTCTGCTTT+TGG 0.284215 5_1:-17762139 None:intergenic
TTAGTTTCTCTACCAACTTC+AGG 0.304112 5_1:+17753417 Msa0721290:CDS
TTACTATTATTATTTGTATC+AGG 0.305274 5_1:+17762043 Msa0721290:three_prime_UTR
GAGGATGGGGACTCTGAGTT+AGG 0.306455 5_1:+17752880 Msa0721290:five_prime_UTR
AAGGGAATGTAGATCTATTA+AGG 0.311704 5_1:+17760270 Msa0721290:CDS
GAATCCCTTGGTCCAAGTTC+TGG 0.311816 5_1:+17761792 Msa0721290:CDS
ATGTCGCATGTGCAGTATTC+CGG 0.318047 5_1:+17760785 Msa0721290:CDS
AAACCAGATTTCATAGATTC+AGG 0.326405 5_1:+17760581 Msa0721290:CDS
GCCCAAAATTCTGTTCTGTT+TGG 0.329414 5_1:+17760848 Msa0721290:CDS
GATAACTTTGTTGCTGTGTT+TGG 0.334518 5_1:-17760484 None:intergenic
GAATCTTGCATGCAAGGATA+TGG 0.339276 5_1:-17760989 None:intergenic
GGTATGAGTGAATGTAATAA+TGG 0.340613 5_1:+17752844 Msa0721290:five_prime_UTR
CAGCATAGAATGACCACTTC+TGG 0.341347 5_1:-17760690 None:intergenic
GTTAGGGGAGTCTAGTTTCC+AGG 0.341450 5_1:+17760961 Msa0721290:CDS
AGGCATGAAGTTTGCTGCTT+CGG 0.349397 5_1:+17760601 Msa0721290:CDS
GTTTCTGGACTACCATCATT+AGG 0.349414 5_1:+17761855 Msa0721290:CDS
GAGGAGTTGGCTCAGATGTT+TGG 0.356281 5_1:+17761238 Msa0721290:CDS
AGCAACTAATAGCTGCTTTA+CGG 0.356761 5_1:+17757442 Msa0721290:CDS
GAAAGATACGTTTCTTCCTA+TGG 0.361096 5_1:+17754029 Msa0721290:CDS
ACTGCTATTGTTGTAGCATT+TGG 0.366260 5_1:+17762161 Msa0721290:three_prime_UTR
GACAGCCACGGGTATCGTTA+TGG 0.368607 5_1:+17759688 Msa0721290:CDS
ATGCCTGAATCTATGAAATC+TGG 0.370393 5_1:-17760584 None:intergenic
AATAAGACCTTCACAAATAT+CGG 0.370930 5_1:-17761061 None:intergenic
ACTTGGACCAAGGGATTCTA+TGG 0.377464 5_1:-17761787 None:intergenic
TCCAGCACCTTGAAAATTCA+TGG 0.383068 5_1:-17760147 None:intergenic
TTCATCCTTTGTCCAGAACT+TGG 0.383578 5_1:-17761804 None:intergenic
TGGCACACAAGTTTACAAAT+TGG 0.384768 5_1:-17762119 None:intergenic
TAATTTGTAGGCTGCTTACT+TGG 0.387254 5_1:-17754063 None:intergenic
GTGAATGTAATAATGGGTTT+GGG 0.387641 5_1:+17752851 Msa0721290:five_prime_UTR
TACGATCGATGTATCTCTTC+CGG 0.388584 5_1:-17760804 None:intergenic
AATTGTACAGTTAGAAATCT+AGG 0.388948 5_1:+17762198 Msa0721290:three_prime_UTR
TCCATTGTGCATAGGTTGGT+TGG 0.395710 5_1:+17759643 Msa0721290:intron
GTTTGCTGCTTCGGTTTCAC+CGG 0.398947 5_1:+17760610 Msa0721290:CDS
GGCTCAGATGTTTGGAATTG+AGG 0.399052 5_1:+17761246 Msa0721290:CDS
ATCAATTTCTCTGTTGGTTG+TGG 0.402028 5_1:-17753676 None:intergenic
TTCTCATTGGAGGTCTGTTA+AGG 0.408471 5_1:+17759125 Msa0721290:CDS
AGTGAATGTAATAATGGGTT+TGG 0.414876 5_1:+17752850 Msa0721290:five_prime_UTR
CTTGGTTCACTTTCTTCTGA+AGG 0.415434 5_1:+17760644 Msa0721290:CDS
GGAGAGTGGTATGACGAATT+CGG 0.417640 5_1:-17757577 None:intergenic
GGCAGCTTGTATTTGTCGAC+AGG 0.419769 5_1:+17761299 Msa0721290:CDS
TGAGAATTTGGCCACCGAAC+AGG 0.420532 5_1:-17759108 None:intergenic
AAAATTGTGTCTTTATAAAG+AGG 0.421389 5_1:+17752928 Msa0721290:five_prime_UTR
TCGGAGTTGTTGCAAAGTGC+AGG 0.421931 5_1:+17761013 Msa0721290:CDS
ATGTGGATGCGAGGCGGTCC+TGG 0.424062 5_1:+17760107 Msa0721290:CDS
AACAGTCACCTCAACAATCA+TGG 0.424537 5_1:+17760717 Msa0721290:CDS
AGATGATGCAGTAGTATAAC+GGG 0.425269 5_1:-17760915 None:intergenic
GTTATGAAGCTTTCAACATC+AGG 0.426677 5_1:+17752973 Msa0721290:exon
CCTTCGCAGGTTGATGCCAT+TGG 0.428278 5_1:+17760755 Msa0721290:CDS
AAGGTGCTGGATTGTTGCCC+TGG 0.429616 5_1:+17760159 Msa0721290:CDS
ACCTTGTTTGTGCAGGTACA+TGG 0.430262 5_1:+17759056 Msa0721290:intron
ATACATTGGAAATGTAGTTA+AGG 0.432741 5_1:-17759721 None:intergenic
CCTGAAGATATTCAGAAAAT+GGG 0.436474 5_1:+17761756 Msa0721290:CDS
CAAGCCATGTTGGCTGCTGC+TGG 0.444005 5_1:+17760236 Msa0721290:CDS
GGCGGCAAGCTAGGATAATT+CGG 0.445338 5_1:-17753708 None:intergenic
TCACGAGCTGCGGGAGGAGT+TGG 0.446108 5_1:+17761225 Msa0721290:CDS
TAATGGGTTTGGGGAAATTG+AGG 0.447037 5_1:+17752861 Msa0721290:five_prime_UTR
TTCGGTGGCCAAATTCTCAT+TGG 0.448662 5_1:+17759112 Msa0721290:CDS
CCATTGTGCATAGGTTGGTT+GGG 0.449329 5_1:+17759644 Msa0721290:intron
ACAGCCACGGGTATCGTTAT+GGG 0.450191 5_1:+17759689 Msa0721290:CDS
CATGATATTATTAGTCGATA+CGG 0.451051 5_1:-17760387 None:intergenic
TTTGAAGATCCTCTTAGATC+AGG 0.451717 5_1:+17761274 Msa0721290:CDS
GTGTGCCAAAAGCAGAAATA+TGG 0.451746 5_1:+17762134 Msa0721290:three_prime_UTR
GGCAGAGATGAGGCAACTAA+TGG 0.452894 5_1:+17760080 Msa0721290:CDS
ATCGAGTCTTGGCTGCATCC+AGG 0.452925 5_1:-17760177 None:intergenic
TTGTCCATCAATTTCTCTGT+TGG 0.456717 5_1:-17753682 None:intergenic
TACATTGGAAATGTAGTTAA+GGG 0.457324 5_1:-17759720 None:intergenic
TTTGTCTCCTTTCTTTACAA+AGG 0.457981 5_1:+17760043 Msa0721290:CDS
GCTCAGATGTTTGGAATTGA+GGG 0.458722 5_1:+17761247 Msa0721290:CDS
GGATGGAGTGCATTGGAAAG+TGG 0.459683 5_1:+17752815 Msa0721290:five_prime_UTR
ATGCATCGACAATGCCGTTA+GGG 0.462289 5_1:+17760945 Msa0721290:CDS
TAGTTTCTCTACCAACTTCA+GGG 0.464443 5_1:+17753418 Msa0721290:CDS
CCAAAATTCTGTTCTGTTTG+GGG 0.464487 5_1:+17760850 Msa0721290:CDS
AACTAGAGTGTTGCTTCTGA+TGG 0.464826 5_1:-17760538 None:intergenic
TTAATAGATCTACATTCCCT+TGG 0.465558 5_1:-17760268 None:intergenic
TGAAGTTGGTAGAGAAACTA+AGG 0.467728 5_1:-17753415 None:intergenic
GGTTGGGATGAATCGACAGC+TGG 0.467846 5_1:+17759660 Msa0721290:CDS
GGAAATAGTGATGGATACAT+TGG 0.468477 5_1:-17759735 None:intergenic
GTTTGGGGAAATTGAGGATG+GGG 0.469302 5_1:+17752867 Msa0721290:five_prime_UTR
GCATTGTAACATTATGAAGT+TGG 0.469818 5_1:-17753743 None:intergenic
TACCGACAGAAACGCGTGTA+TGG 0.471442 5_1:-17757620 None:intergenic
TGATCATTTCCTAGCAAAGT+TGG 0.472268 5_1:-17760200 None:intergenic
GATGCATCGACAATGCCGTT+AGG 0.472307 5_1:+17760944 Msa0721290:CDS
CATAACAGTTTGTGGCCTAC+TGG 0.472353 5_1:-17757354 None:intergenic
CCTTCACAAATATCGGTGTC+TGG 0.475371 5_1:-17761054 None:intergenic
GGGGTCAATATCGATTCGTC+TGG 0.476741 5_1:+17760869 Msa0721290:CDS
GATCATTTGTGAATAATGTT+TGG 0.476926 5_1:+17761715 Msa0721290:intron
GAGAACGATGTTCTTCTCCT+TGG 0.480918 5_1:+17761322 Msa0721290:CDS
AGCTGCCAGCCTGATCTAAG+AGG 0.481740 5_1:-17761283 None:intergenic
GTATGAGTGAATGTAATAAT+GGG 0.482880 5_1:+17752845 Msa0721290:five_prime_UTR
ACAACATCCTTTGTAAAGAA+AGG 0.484793 5_1:-17760050 None:intergenic
TGCATTGGAAAGTGGGAGAG+AGG 0.485615 5_1:+17752823 Msa0721290:five_prime_UTR
TTTGCGTGTGTGTGTTGGGA+TGG 0.485758 5_1:+17752798 Msa0721290:five_prime_UTR
TTGGTTCACTTTCTTCTGAA+GGG 0.486436 5_1:+17760645 Msa0721290:CDS
TTCTCCTTGGAGACGATCCG+TGG 0.491849 5_1:+17761335 Msa0721290:CDS
CACTCCAGCCTGTGGTAAGA+AGG 0.492721 5_1:-17757146 None:intergenic
TGTCTCTATCAGAAAGTGAT+TGG 0.494259 5_1:+17752380 Msa0721290:five_prime_UTR
GGGTTTGGGGAAATTGAGGA+TGG 0.494369 5_1:+17752865 Msa0721290:five_prime_UTR
GAGATGATGCAGTAGTATAA+CGG 0.494986 5_1:-17760916 None:intergenic
TTACGGTGTTCTTTAATCCA+AGG 0.496586 5_1:+17757459 Msa0721290:CDS
AGCAAAGTTGGATCGAGTCT+TGG 0.496683 5_1:-17760188 None:intergenic
GAGTTAAGACCATGGTCTCC+AGG 0.497647 5_1:-17760125 None:intergenic
AGTGTTTGAATTCTGAGCTA+TGG 0.497953 5_1:+17753376 Msa0721290:CDS
ACAACCAACAGAGAAATTGA+TGG 0.500348 5_1:+17753678 Msa0721290:CDS
CTCAAAGTATTCACCTTCGC+AGG 0.501586 5_1:+17760742 Msa0721290:CDS
TGCTGTTGCTGAAGCTGCAT+AGG 0.502485 5_1:-17760350 None:intergenic
ATCAACTGAGGCGGCAAGCT+AGG 0.503838 5_1:-17753717 None:intergenic
CCTTTCAACTATCAACAATC+AGG 0.507972 5_1:+17760317 Msa0721290:CDS
CCATGGTCGTTTCAATCTAA+GGG 0.508697 5_1:-17759757 None:intergenic
GGTGGCCAAATTCTCATTGG+AGG 0.509028 5_1:+17759115 Msa0721290:CDS
TCCGATGAATCTTGCATGCA+AGG 0.510858 5_1:-17760995 None:intergenic
TCACTTTCTTCTGAAGGGAG+TGG 0.511627 5_1:+17760650 Msa0721290:CDS
CAGCAGCAGCCAACATGGCT+TGG 0.511774 5_1:-17760235 None:intergenic
AGGATGGGGACTCTGAGTTA+GGG 0.512453 5_1:+17752881 Msa0721290:five_prime_UTR
AACATCAGGAATGAGTCAGC+AGG 0.513653 5_1:+17752987 Msa0721290:CDS
TCGAGTCTTGGCTGCATCCA+GGG 0.514219 5_1:-17760176 None:intergenic
GATGGAGTGCATTGGAAAGT+GGG 0.516530 5_1:+17752816 Msa0721290:five_prime_UTR
CTGCGAAGGTGAATACTTTG+AGG 0.517118 5_1:-17760741 None:intergenic
CTGCTCAAGAACTAATTGCT+AGG 0.517720 5_1:+17754278 Msa0721290:CDS
ACAAAGGATGTTGTTACAGA+TGG 0.518360 5_1:+17760059 Msa0721290:CDS
CTAGCAATTAGTTCTTGAGC+AGG 0.518496 5_1:-17754277 None:intergenic
CCCTCAAGGTCATAGTGAGC+AGG 0.518733 5_1:+17753458 Msa0721290:CDS
TCCGCTAGCCCTTGGCCTTG+TGG 0.520885 5_1:-17760413 None:intergenic
CTTGGAATCCCTAATTCCAT+AGG 0.521068 5_1:-17754045 None:intergenic
TCACATGGATCCCATGATGT+TGG 0.521582 5_1:+17752735 Msa0721290:five_prime_UTR
GTATACAAATCAGGTTCAGT+AGG 0.522013 5_1:+17761169 Msa0721290:CDS
TCACCGGGTCAAAACATGCT+TGG 0.525405 5_1:+17760626 Msa0721290:CDS
TTGAAACGACCATGGCATCC+TGG 0.526294 5_1:+17759765 Msa0721290:CDS
TGTTGATTGTATGTTTCACT+TGG 0.526929 5_1:+17752545 Msa0721290:five_prime_UTR
ATTATGAAAGTTGGCTGTGG+TGG 0.529125 5_1:+17760002 Msa0721290:intron
GTGGTAAGAAGGTGTCGTTT+TGG 0.529135 5_1:-17757135 None:intergenic
GGACAGTGGTAGGGAGCAGA+AGG 0.530895 5_1:-17760892 None:intergenic
CCAAGAAAAGAAGAAGTGCC+AGG 0.532299 5_1:-17759783 None:intergenic
CCTGATTGTTGATAGTTGAA+AGG 0.533223 5_1:-17760317 None:intergenic
ATCATGCAACCACAAGGCCA+AGG 0.535895 5_1:+17760404 Msa0721290:CDS
CCTTGTTTGTGCAGGTACAT+GGG 0.538001 5_1:+17759057 Msa0721290:intron
GGATAACGTACCGGAGTCAA+CGG 0.538035 5_1:-17753921 None:intergenic
AAGTGATTGGCCACAAAACA+AGG 0.538773 5_1:+17752393 Msa0721290:five_prime_UTR
AAAGATTCTCCGCTAGCCCT+TGG 0.539997 5_1:-17760421 None:intergenic
GACACCTTCTTACCACAGGC+TGG 0.540257 5_1:+17757142 Msa0721290:CDS
TTGTCCAGAACTTGGACCAA+GGG 0.541296 5_1:-17761796 None:intergenic
CCTGCTCACTATGACCTTGA+GGG 0.546063 5_1:-17753458 None:intergenic
GATGATGGCATAACAGTTTG+TGG 0.546352 5_1:-17757362 None:intergenic
TCGCTTGAAAGAACTGATGA+TGG 0.548496 5_1:-17757377 None:intergenic
TGCTCAAGAACTAATTGCTA+GGG 0.548822 5_1:+17754279 Msa0721290:CDS
AGACTCGATCCAACTTTGCT+AGG 0.549538 5_1:+17760191 Msa0721290:CDS
CAAACCAGCAGCAGCCAACA+TGG 0.552204 5_1:-17760240 None:intergenic
CAACAGCTATCACGAGCTGC+GGG 0.552575 5_1:+17761216 Msa0721290:CDS
AGAAATTTCAACTACTCGTG+TGG 0.553807 5_1:-17762261 None:intergenic
TAAGTGACATGGATCCTGTT+CGG 0.554501 5_1:+17759094 Msa0721290:CDS
GGTTTGGGGAAATTGAGGAT+GGG 0.555254 5_1:+17752866 Msa0721290:five_prime_UTR
GAAACTTCCACTCAACATCA+TGG 0.555525 5_1:-17754306 None:intergenic
AAGATCCTCTTAGATCAGGC+TGG 0.555768 5_1:+17761278 Msa0721290:CDS
TACCATACACGCGTTTCTGT+CGG 0.559073 5_1:+17757618 Msa0721290:CDS
GAGCTATGGCATGCATGTGC+GGG 0.561055 5_1:+17753390 Msa0721290:CDS
TGAGCTATGGCATGCATGTG+CGG 0.562220 5_1:+17753389 Msa0721290:CDS
AATCTAAGGGGAAATAGTGA+TGG 0.562581 5_1:-17759744 None:intergenic
ACCACAAGGCCAAGGGCTAG+CGG 0.563802 5_1:+17760412 Msa0721290:CDS
TGACCCTTATGAGCCAAAAG+AGG 0.564460 5_1:-17752571 None:intergenic
TATTCAAGTGAGCCTAATGA+TGG 0.565204 5_1:-17761867 None:intergenic
GTTGGGATGAATCGACAGCT+GGG 0.567928 5_1:+17759661 Msa0721290:CDS
GAAATTTCAACTACTCGTGT+GGG 0.568177 5_1:-17762260 None:intergenic
CTGTTGAATTTATCCAGAAG+TGG 0.568337 5_1:+17760677 Msa0721290:CDS
GTAGTTGTCGATTTGACCGT+GGG 0.568874 5_1:-17761922 None:intergenic
ACAAATAATAATAGTAAACA+TGG 0.569415 5_1:-17762037 None:intergenic
TCCTTGCATGCAAGATTCAT+CGG 0.569439 5_1:+17760994 Msa0721290:CDS
TTTGTCCAGAACTTGGACCA+AGG 0.569650 5_1:-17761797 None:intergenic
GATTTGACCGTGGGATCTGA+AGG 0.570371 5_1:-17761913 None:intergenic
GAAGAAGTGCCAGGATGCCA+TGG 0.571373 5_1:-17759774 None:intergenic
GCAATTAGTTCTTGAGCAGG+AGG 0.571462 5_1:-17754274 None:intergenic
CTCATTATGAAAGTTGGCTG+TGG 0.573398 5_1:+17759999 Msa0721290:intron
ACAGTCACCTCAACAATCAT+GGG 0.573472 5_1:+17760718 Msa0721290:CDS
CTGCTGGTTTGCAGAACCAA+GGG 0.574081 5_1:+17760252 Msa0721290:CDS
GATTGTTGTGCGATTTCTGA+AGG 0.575710 5_1:-17760454 None:intergenic
GACGCTACAGCCGTTGACTC+CGG 0.576927 5_1:+17753911 Msa0721290:CDS
ATGAGTCAGCAGGGTCATGA+AGG 0.577400 5_1:+17752997 Msa0721290:CDS
CCCTTAGATTGAAACGACCA+TGG 0.577662 5_1:+17759757 Msa0721290:CDS
TTTGCTGCTTCGGTTTCACC+GGG 0.578250 5_1:+17760611 Msa0721290:CDS
AGCTGGGGAGAGACAGCCAC+GGG 0.580172 5_1:+17759677 Msa0721290:CDS
TTAGGGGAGTCTAGTTTCCA+GGG 0.581051 5_1:+17760962 Msa0721290:CDS
CTCAGATGTTTGGAATTGAG+GGG 0.583967 5_1:+17761248 Msa0721290:CDS
TCTCCTTGGAGACGATCCGT+GGG 0.584101 5_1:+17761336 Msa0721290:CDS
GCTTTGATATATTTGGAGAG+TGG 0.585290 5_1:-17757591 None:intergenic
TAACGGCATTGTCGATGCAT+CGG 0.586200 5_1:-17760942 None:intergenic
ACCACACGAGTCCCTGAAGT+TGG 0.588097 5_1:-17753429 None:intergenic
TGTGTTGGGATGGAGTGCAT+TGG 0.589614 5_1:+17752808 Msa0721290:five_prime_UTR
CGTGTGGTTTACTTCCCTCA+AGG 0.589746 5_1:+17753444 Msa0721290:CDS
GAACTCTATACTTACTCCCA+CGG 0.591499 5_1:-17761352 None:intergenic
CGAGGCGGTCCTGGAGACCA+TGG 0.593160 5_1:+17760116 Msa0721290:CDS
GAAGAAGCCATAGAATCCCT+TGG 0.594811 5_1:+17761780 Msa0721290:CDS
CGGAGTTGTTGCAAAGTGCA+GGG 0.599731 5_1:+17761014 Msa0721290:CDS
ACCTGCTCACTATGACCTTG+AGG 0.599895 5_1:-17753459 None:intergenic
TCAGCAATACCAAGCCATGT+TGG 0.601794 5_1:+17760226 Msa0721290:CDS
TGGGAATACGTCGTGCCAGT+AGG 0.602014 5_1:+17757339 Msa0721290:CDS
ACTCCCACGGATCGTCTCCA+AGG 0.611476 5_1:-17761339 None:intergenic
TGCAAGGATATGGAGAACCC+TGG 0.612109 5_1:-17760979 None:intergenic
AAACGACACCTTCTTACCAC+AGG 0.613976 5_1:+17757138 Msa0721290:CDS
CTGAAGAATCAAGTGTCCGC+AGG 0.618203 5_1:+17757667 Msa0721290:CDS
GGGATCTCCATGATGTTGAG+TGG 0.619633 5_1:+17754299 Msa0721290:CDS
GCTGCTGGTTTGCAGAACCA+AGG 0.621321 5_1:+17760251 Msa0721290:CDS
TATACAAATCAGGTTCAGTA+GGG 0.621544 5_1:+17761170 Msa0721290:CDS
AGTGGTATGACGAATTCGGA+TGG 0.623557 5_1:-17757573 None:intergenic
AACAAATACACTCCAGCCTG+TGG 0.623923 5_1:-17757154 None:intergenic
GAGTGTTGCTTCTGATGGAG+CGG 0.624303 5_1:-17760533 None:intergenic
AAGTATTCCTTCAGATCCCA+CGG 0.624705 5_1:+17761906 Msa0721290:three_prime_UTR
TAGTATATTCAGAATATGCA+AGG 0.627349 5_1:-17762001 None:intergenic
TCAAGCGATAGCATGCACAT+TGG 0.627478 5_1:+17757392 Msa0721290:CDS
GCGAGTGATACAAGCACACA+TGG 0.628539 5_1:+17754105 Msa0721290:CDS
ATCACGGACACTACCAATGG+AGG 0.629829 5_1:-17754168 None:intergenic
TCATGCAACCACAAGGCCAA+GGG 0.630925 5_1:+17760405 Msa0721290:CDS
ACCAACTTCAGGGACTCGTG+TGG 0.631510 5_1:+17753428 Msa0721290:CDS
GTGATACAAGCACACATGGA+GGG 0.632714 5_1:+17754109 Msa0721290:CDS
CCAATGGCATCAACCTGCGA+AGG 0.633494 5_1:-17760755 None:intergenic
GGCGCTCACTTGACATCTCG+CGG 0.633721 5_1:+17761191 Msa0721290:CDS
TTGGTCCAAGTTCTGGACAA+AGG 0.633729 5_1:+17761799 Msa0721290:CDS
TCAACAGCTATCACGAGCTG+CGG 0.635957 5_1:+17761215 Msa0721290:CDS
ATGCGACATCGAATTGCCAA+TGG 0.636979 5_1:-17760771 None:intergenic
AGTAGTTGTCGATTTGACCG+TGG 0.637911 5_1:-17761923 None:intergenic
TGCATCGACAATGCCGTTAG+GGG 0.639311 5_1:+17760946 Msa0721290:CDS
TGGAAACTAGACTCCCCTAA+CGG 0.640862 5_1:-17760959 None:intergenic
CAGCTATCACGAGCTGCGGG+AGG 0.641910 5_1:+17761219 Msa0721290:CDS
TTTGAGGCCCATGATTGTTG+AGG 0.647475 5_1:-17760725 None:intergenic
TGTTACAGATGGCAGAGATG+AGG 0.648397 5_1:+17760070 Msa0721290:CDS
ACATCAGGAATGAGTCAGCA+GGG 0.651756 5_1:+17752988 Msa0721290:CDS
GCTGAAGCTGCATAGGACTG+AGG 0.652013 5_1:-17760343 None:intergenic
AATAATATCATGCAACCACA+AGG 0.655817 5_1:+17760398 Msa0721290:CDS
ACATCGATCGTACAACCACA+TGG 0.657416 5_1:+17760815 Msa0721290:CDS
CATGGTCGTTTCAATCTAAG+GGG 0.661723 5_1:-17759756 None:intergenic
GCAGCTTGTATTTGTCGACA+GGG 0.662044 5_1:+17761300 Msa0721290:CDS
TATAACTAGCATAAGTGACA+TGG 0.663626 5_1:+17759083 Msa0721290:CDS
CCAGACACCGATATTTGTGA+AGG 0.664833 5_1:+17761054 Msa0721290:CDS
ACTTTCTCAGCTGCACGACG+AGG 0.665589 5_1:-17754141 None:intergenic
ATTTCCCATAACGATACCCG+TGG 0.672203 5_1:-17759693 None:intergenic
AGTTGGCATATCAACTGAGG+CGG 0.676478 5_1:-17753726 None:intergenic
TGAATGTAATAATGGGTTTG+GGG 0.677603 5_1:+17752852 Msa0721290:five_prime_UTR
GGACAAAGGATGAACAACGC+TGG 0.681712 5_1:+17761813 Msa0721290:CDS
AATTCATGGAGTTAAGACCA+TGG 0.682832 5_1:-17760133 None:intergenic
CAGCTGGGGAGAGACAGCCA+CGG 0.687247 5_1:+17759676 Msa0721290:CDS
TGGGCATCTGAGTTGCCATG+TGG 0.688526 5_1:-17760830 None:intergenic
TGAAGTTGGCATATCAACTG+AGG 0.692734 5_1:-17753729 None:intergenic
GTGACATGGATCCTGTTCGG+TGG 0.692792 5_1:+17759097 Msa0721290:CDS
TTGGGATGAATCGACAGCTG+GGG 0.697786 5_1:+17759662 Msa0721290:CDS
GAAGTTGGTAGAGAAACTAA+GGG 0.700437 5_1:-17753414 None:intergenic
AGGCAACTAATGGACTGATG+TGG 0.709934 5_1:+17760090 Msa0721290:CDS
AGTGATACAAGCACACATGG+AGG 0.710783 5_1:+17754108 Msa0721290:CDS
AATGGACTGATGTGGATGCG+AGG 0.730670 5_1:+17760098 Msa0721290:CDS
GATGATGCAGTAGTATAACG+GGG 0.741334 5_1:-17760914 None:intergenic
ATGATGCAGTAGTATAACGG+GGG 0.743954 5_1:-17760913 None:intergenic
GGACTGATGTGGATGCGAGG+CGG 0.757867 5_1:+17760101 Msa0721290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATTACTTTTTTTA+AGG + chr5_1:17752657-17752676 Msa0721290:five_prime_UTR 10.0%
!!! ATTTGAATTTGATTTATATT+TGG + chr5_1:17754647-17754666 Msa0721290:intron 10.0%
!!! TTTGAATTTGATTTATATTT+GGG + chr5_1:17754648-17754667 Msa0721290:intron 10.0%
!!! AAATTAAGACAATTTTATAT+TGG + chr5_1:17754724-17754743 Msa0721290:intron 10.0%
!! ACAATGAATAAAAAAATATT+TGG - chr5_1:17756186-17756205 None:intergenic 10.0%
!!! TTTCTTTTTCTTTTTAAATT+AGG + chr5_1:17756997-17757016 Msa0721290:intron 10.0%
!!! TTCTTTTTCTTTTTAAATTA+GGG + chr5_1:17756998-17757017 Msa0721290:intron 10.0%
!! TAAAATAAAACAATTTCAAA+AGG - chr5_1:17757973-17757992 None:intergenic 10.0%
!!! ACTTTTTTTAAGGTTTTTTT+TGG + chr5_1:17752667-17752686 Msa0721290:five_prime_UTR 15.0%
!! ATATATTTCTCTTTCTATTT+GGG + chr5_1:17754228-17754247 Msa0721290:intron 15.0%
!! ATGATAATATATGTGTAAAA+AGG - chr5_1:17754846-17754865 None:intergenic 15.0%
!!! TTAAATGTATCCTTTTTTAT+AGG - chr5_1:17754996-17755015 None:intergenic 15.0%
!!! ATTTTTTTTTTTAACTGCAT+TGG + chr5_1:17755687-17755706 Msa0721290:intron 15.0%
!! ATTATAAATCATTAATAGAC+AGG + chr5_1:17756061-17756080 Msa0721290:intron 15.0%
!! CATATCATTTAATAGTTATT+TGG + chr5_1:17757912-17757931 Msa0721290:intron 15.0%
!!! TGATTTTTGTTTTGAAAAAT+TGG + chr5_1:17758097-17758116 Msa0721290:intron 15.0%
!!! TTTTTATCACCTTTAAATTT+TGG + chr5_1:17758210-17758229 Msa0721290:intron 15.0%
!!! TTTTATCACCTTTAAATTTT+GGG + chr5_1:17758211-17758230 Msa0721290:intron 15.0%
!!! CCTTAAAAATTGTTTTTTTT+GGG - chr5_1:17758533-17758552 None:intergenic 15.0%
!!! ACCTTAAAAATTGTTTTTTT+TGG - chr5_1:17758534-17758553 None:intergenic 15.0%
!! TGTTAAAAAATGTAAGTAAA+AGG + chr5_1:17758723-17758742 Msa0721290:intron 15.0%
!! GTTAAAAAATGTAAGTAAAA+GGG + chr5_1:17758724-17758743 Msa0721290:intron 15.0%
!! AAAAGTAAACTTAATGAAAA+AGG - chr5_1:17759341-17759360 None:intergenic 15.0%
!! GGTTAATATACAAAAAATAA+GGG - chr5_1:17761469-17761488 None:intergenic 15.0%
!! TGGTTAATATACAAAAAATA+AGG - chr5_1:17761470-17761489 None:intergenic 15.0%
!! ACAAATAATAATAGTAAACA+TGG - chr5_1:17762040-17762059 None:intergenic 15.0%
!! TTACTATTATTATTTGTATC+AGG + chr5_1:17762043-17762062 Msa0721290:three_prime_UTR 15.0%
!!! TTTTTTAAGGTTTTTTTTGG+TGG + chr5_1:17752670-17752689 Msa0721290:five_prime_UTR 20.0%
!!! TTTTTAAGGTTTTTTTTGGT+GGG + chr5_1:17752671-17752690 Msa0721290:five_prime_UTR 20.0%
!! AAAATTGTGTCTTTATAAAG+AGG + chr5_1:17752928-17752947 Msa0721290:five_prime_UTR 20.0%
!! CTTTATAAAGAGGAAAAAAA+AGG + chr5_1:17752938-17752957 Msa0721290:five_prime_UTR 20.0%
!! AAAAAAACATAAGAGAGAAA+AGG - chr5_1:17753031-17753050 None:intergenic 20.0%
!! ATATTGAAGCATAAACAAAA+GGG - chr5_1:17753288-17753307 None:intergenic 20.0%
!! CAAATTATCTCATACAAAAA+AGG - chr5_1:17753322-17753341 None:intergenic 20.0%
!! TAATTTGATGTGTGAAATTA+TGG + chr5_1:17753335-17753354 Msa0721290:intron 20.0%
!! GATATATTTCTCTTTCTATT+TGG + chr5_1:17754227-17754246 Msa0721290:intron 20.0%
!! GTTTAATTAAATGTTAGTTG+AGG + chr5_1:17754560-17754579 Msa0721290:intron 20.0%
!! ATAATATATGTGTAAAAAGG+AGG - chr5_1:17754843-17754862 None:intergenic 20.0%
!! AAAAAAGGATACATTTAACT+TGG + chr5_1:17754998-17755017 Msa0721290:intron 20.0%
!!! ACTTACTATAGTTGTAATTT+TGG - chr5_1:17755094-17755113 None:intergenic 20.0%
!! TGTTAATATCACTTATGTTT+GGG - chr5_1:17755277-17755296 None:intergenic 20.0%
!! ATGTTAATATCACTTATGTT+TGG - chr5_1:17755278-17755297 None:intergenic 20.0%
!! TGTTTATTAACCAAATCAAT+AGG + chr5_1:17755297-17755316 Msa0721290:intron 20.0%
!!! TAAGAAATTAGTGCATATTT+TGG + chr5_1:17755367-17755386 Msa0721290:intron 20.0%
!!! TTTTAGCAAAAACTACTTTT+TGG - chr5_1:17755441-17755460 None:intergenic 20.0%
!! TGAATTATGTGACTATTATT+TGG - chr5_1:17755505-17755524 None:intergenic 20.0%
!! AAATTATTCTGTTAGGAAAT+TGG + chr5_1:17756451-17756470 Msa0721290:intron 20.0%
!!! ACTATCTTGTGTTTTTTATA+TGG - chr5_1:17756525-17756544 None:intergenic 20.0%
!!! TTTTGTTAGAAAACAGATAT+CGG + chr5_1:17756827-17756846 Msa0721290:intron 20.0%
!! CTAAAGTAAATTAAAAACGA+TGG - chr5_1:17756896-17756915 None:intergenic 20.0%
!! AGTATTATTCATAATGACTT+AGG - chr5_1:17757032-17757051 None:intergenic 20.0%
!!! ATAAAAAGTATTCAAAAAGG+TGG - chr5_1:17757238-17757257 None:intergenic 20.0%
!!! GGAATAAAAAGTATTCAAAA+AGG - chr5_1:17757241-17757260 None:intergenic 20.0%
!!! TTATCTGTATTTTCATTGAT+AGG + chr5_1:17757294-17757313 Msa0721290:intron 20.0%
!! TTCAGAGAAAAAATAAATGA+TGG - chr5_1:17757702-17757721 None:intergenic 20.0%
!!! ATTGTAGAGATAATTTTGTT+AGG + chr5_1:17757742-17757761 Msa0721290:intron 20.0%
!!! TTTATTGATAACTGGATTTA+TGG + chr5_1:17757881-17757900 Msa0721290:intron 20.0%
!! TCATTTAATAGTTATTTGGT+AGG + chr5_1:17757916-17757935 Msa0721290:intron 20.0%
!!! GTAAATTTAACTTGGATTTA+AGG + chr5_1:17758045-17758064 Msa0721290:intron 20.0%
!!! ATTCAAATCCTAAGTTTTTT+TGG - chr5_1:17758381-17758400 None:intergenic 20.0%
!!! ATTGTTTTTTTTGGGTATTT+CGG - chr5_1:17758525-17758544 None:intergenic 20.0%
!!! CCCAAAAAAAACAATTTTTA+AGG + chr5_1:17758530-17758549 Msa0721290:intron 20.0%
!!! TTTATTGGTTAACATTTATG+TGG + chr5_1:17758646-17758665 Msa0721290:intron 20.0%
!!! TTATTGGTTAACATTTATGT+GGG + chr5_1:17758647-17758666 Msa0721290:intron 20.0%
!! TGATCCTACTAAATTTATAT+GGG - chr5_1:17758674-17758693 None:intergenic 20.0%
!! TTGATCCTACTAAATTTATA+TGG - chr5_1:17758675-17758694 None:intergenic 20.0%
!! TAATAGAAAAACTAGAGTTA+CGG + chr5_1:17758772-17758791 Msa0721290:intron 20.0%
!! ATATTGAAATTTACATACCA+TGG - chr5_1:17758817-17758836 None:intergenic 20.0%
!! GTCAATTATATGTCAAAAAA+AGG - chr5_1:17758888-17758907 None:intergenic 20.0%
!!! TATTTCAATTAGTCGAATTT+TGG + chr5_1:17758957-17758976 Msa0721290:intron 20.0%
!! CACAATGTAATAGATAAAAT+TGG + chr5_1:17759161-17759180 Msa0721290:intron 20.0%
!! AAGATTTATTTATCAAAGAC+AGG - chr5_1:17759294-17759313 None:intergenic 20.0%
!!! TATTTTCTTTTTACATAACC+TGG + chr5_1:17759461-17759480 Msa0721290:intron 20.0%
!! AAATCATGTTCAAATTCAAT+AGG + chr5_1:17759497-17759516 Msa0721290:intron 20.0%
!! TTGTATTCCATATATTAGAA+AGG + chr5_1:17759574-17759593 Msa0721290:intron 20.0%
!! ATTAAATGTAGATGAACATA+AGG - chr5_1:17759958-17759977 None:intergenic 20.0%
!!! TTTAGTTTTATCTTTTTCAC+AGG + chr5_1:17761147-17761166 Msa0721290:intron 20.0%
!!! ATATTAAGCGTTGTATAATA+AGG - chr5_1:17761600-17761619 None:intergenic 20.0%
! AACAAAAACATGAAGAAAAG+TGG - chr5_1:17752523-17752542 None:intergenic 25.0%
!! AAAAACCCTTTTTGTAAAGA+AGG + chr5_1:17752634-17752653 Msa0721290:five_prime_UTR 25.0%
!! AAAACCCTTTTTGTAAAGAA+GGG + chr5_1:17752635-17752654 Msa0721290:five_prime_UTR 25.0%
! AAAACCCTTCTTTACAAAAA+GGG - chr5_1:17752642-17752661 None:intergenic 25.0%
! AAAAACCCTTCTTTACAAAA+AGG - chr5_1:17752643-17752662 None:intergenic 25.0%
!!! TTTTAAGGTTTTTTTTGGTG+GGG + chr5_1:17752672-17752691 Msa0721290:five_prime_UTR 25.0%
!! TGATTTTGTAACTATTCACA+TGG + chr5_1:17752720-17752739 Msa0721290:five_prime_UTR 25.0%
! GTATGAGTGAATGTAATAAT+GGG + chr5_1:17752845-17752864 Msa0721290:five_prime_UTR 25.0%
! CTATACTAAAATTCACTTGA+GGG - chr5_1:17753094-17753113 None:intergenic 25.0%
! TCTATACTAAAATTCACTTG+AGG - chr5_1:17753095-17753114 None:intergenic 25.0%
! TATTGAAGCATAAACAAAAG+GGG - chr5_1:17753287-17753306 None:intergenic 25.0%
! GATATTGAAGCATAAACAAA+AGG - chr5_1:17753289-17753308 None:intergenic 25.0%
! ATGTGTGAAATTATGGTAAT+AGG + chr5_1:17753342-17753361 Msa0721290:intron 25.0%
!! ATAACTTTTCTTGCAAACTT+TGG + chr5_1:17753559-17753578 Msa0721290:intron 25.0%
!!! TTTCTTTTTGTTGTTGCTAT+TGG + chr5_1:17753607-17753626 Msa0721290:intron 25.0%
!! TTTTGCTAAACAATGATTCT+AGG + chr5_1:17753647-17753666 Msa0721290:intron 25.0%
!! TATCCTTTTTATTCTTCGAT+AGG + chr5_1:17753939-17753958 Msa0721290:intron 25.0%
!! GTCTTGCAAAAATAATTTGT+AGG - chr5_1:17754078-17754097 None:intergenic 25.0%
!!! TTATTTTTGCAAGACATTGA+CGG + chr5_1:17754083-17754102 Msa0721290:CDS 25.0%
!!! TGTTTGATTCTAGTTTGATA+TGG + chr5_1:17754205-17754224 Msa0721290:intron 25.0%
! ACAAGATACTGTAACATATA+TGG - chr5_1:17754372-17754391 None:intergenic 25.0%
!! TTTTATAGTTTCACTGTATG+CGG + chr5_1:17754411-17754430 Msa0721290:intron 25.0%
! ATCAAACCGTTATGAAAAAA+TGG + chr5_1:17755195-17755214 Msa0721290:intron 25.0%
! TATGTGACTATTATTTGGAT+TGG - chr5_1:17755500-17755519 None:intergenic 25.0%
!!! TTTTTAACTGCATTGGAAAA+TGG + chr5_1:17755694-17755713 Msa0721290:intron 25.0%
!! AATCAAAGTATTAGGTATGT+GGG - chr5_1:17756269-17756288 None:intergenic 25.0%
! ATACCTAATACTTTGATTGA+GGG + chr5_1:17756271-17756290 Msa0721290:intron 25.0%
!!! GTTGAGTTTTATTTCATAGA+AGG + chr5_1:17756636-17756655 Msa0721290:intron 25.0%
!!! TGTTTGCTAAATTTTTCTAC+AGG - chr5_1:17756682-17756701 None:intergenic 25.0%
! AATTTAGCAAACACAACTTA+TGG + chr5_1:17756689-17756708 Msa0721290:intron 25.0%
! ATTTAGCAAACACAACTTAT+GGG + chr5_1:17756690-17756709 Msa0721290:intron 25.0%
!! TTACTTCAAAAAGAAGCTTT+TGG + chr5_1:17756863-17756882 Msa0721290:intron 25.0%
!!! GTTGTGTTTCTGTTTTATAA+TGG - chr5_1:17756963-17756982 None:intergenic 25.0%
!! AATACATTGGCAATTTTAGA+AGG - chr5_1:17757814-17757833 None:intergenic 25.0%
! TATTATGAGATTGATTGATG+TGG + chr5_1:17757991-17758010 Msa0721290:intron 25.0%
! ATAAACAAAACATGTAACAC+AGG - chr5_1:17758333-17758352 None:intergenic 25.0%
!!! TGTGTTACATGTTTTGTTTA+TGG + chr5_1:17758332-17758351 Msa0721290:intron 25.0%
!!! GTGTTACATGTTTTGTTTAT+GGG + chr5_1:17758333-17758352 Msa0721290:intron 25.0%
! TAGCACTTCTCTTAAAAATT+AGG - chr5_1:17758604-17758623 None:intergenic 25.0%
!! TTTAACACGCTTTCTTTTAT+TGG - chr5_1:17758710-17758729 None:intergenic 25.0%
! GCAAATAAAAAAGGAAATTG+AGG - chr5_1:17758855-17758874 None:intergenic 25.0%
! ACAAATTACAAAAAACCTCA+TGG - chr5_1:17759385-17759404 None:intergenic 25.0%
!!! GAGGTTTTTTGTAATTTGTT+TGG + chr5_1:17759386-17759405 Msa0721290:intron 25.0%
! TACATTGGAAATGTAGTTAA+GGG - chr5_1:17759723-17759742 None:intergenic 25.0%
! ATACATTGGAAATGTAGTTA+AGG - chr5_1:17759724-17759743 None:intergenic 25.0%
! CATGATATTATTAGTCGATA+CGG - chr5_1:17760390-17760409 None:intergenic 25.0%
!!! CAAGATTCAGTTTTAATTCA+AGG + chr5_1:17760506-17760525 Msa0721290:CDS 25.0%
! AATAAGACCTTCACAAATAT+CGG - chr5_1:17761064-17761083 None:intergenic 25.0%
!!! GAACACAAATATTTTGAATG+TGG - chr5_1:17761417-17761436 None:intergenic 25.0%
!!! AGTTTTGACATTTTGTTGTT+TGG + chr5_1:17761672-17761691 Msa0721290:intron 25.0%
!!! ACATTTTGTTGTTTGGTTAT+TGG + chr5_1:17761679-17761698 Msa0721290:intron 25.0%
! GATCATTTGTGAATAATGTT+TGG + chr5_1:17761715-17761734 Msa0721290:intron 25.0%
! TAGTATATTCAGAATATGCA+AGG - chr5_1:17762004-17762023 None:intergenic 25.0%
! AAAAGAAAGACGAAAAACTT+GGG + chr5_1:17762083-17762102 Msa0721290:three_prime_UTR 25.0%
! AATTGTACAGTTAGAAATCT+AGG + chr5_1:17762198-17762217 Msa0721290:three_prime_UTR 25.0%
CTTCTTCAGTTTCATTTCAA+TGG + chr5_1:17752480-17752499 Msa0721290:five_prime_UTR 30.0%
! TGTTGATTGTATGTTTCACT+TGG + chr5_1:17752545-17752564 Msa0721290:five_prime_UTR 30.0%
CCTTAAAAAACCAACATCAT+GGG - chr5_1:17752748-17752767 None:intergenic 30.0%
ACCTTAAAAAACCAACATCA+TGG - chr5_1:17752749-17752768 None:intergenic 30.0%
GGTATGAGTGAATGTAATAA+TGG + chr5_1:17752844-17752863 Msa0721290:five_prime_UTR 30.0%
!! AGTGAATGTAATAATGGGTT+TGG + chr5_1:17752850-17752869 Msa0721290:five_prime_UTR 30.0%
!! GTGAATGTAATAATGGGTTT+GGG + chr5_1:17752851-17752870 Msa0721290:five_prime_UTR 30.0%
!! TGAATGTAATAATGGGTTTG+GGG + chr5_1:17752852-17752871 Msa0721290:five_prime_UTR 30.0%
ATTGAAGCATAAACAAAAGG+GGG - chr5_1:17753286-17753305 None:intergenic 30.0%
TGTGAAATTATGGTAATAGG+AGG + chr5_1:17753345-17753364 Msa0721290:intron 30.0%
GTGAAATTATGGTAATAGGA+GGG + chr5_1:17753346-17753365 Msa0721290:intron 30.0%
TGAAATTATGGTAATAGGAG+GGG + chr5_1:17753347-17753366 Msa0721290:intron 30.0%
AAACAATAAGGAGTTGTAGT+AGG - chr5_1:17753504-17753523 None:intergenic 30.0%
TACACAACACTGAAACAATA+AGG - chr5_1:17753516-17753535 None:intergenic 30.0%
GCATTGTAACATTATGAAGT+TGG - chr5_1:17753746-17753765 None:intergenic 30.0%
! TAGAGCTTGTGTTAATTTTC+AGG + chr5_1:17753854-17753873 Msa0721290:intron 30.0%
GAATAAAAAGGATAACGTAC+CGG - chr5_1:17753933-17753952 None:intergenic 30.0%
CAACCTATCGAAGAATAAAA+AGG - chr5_1:17753945-17753964 None:intergenic 30.0%
CAGAAAGGAAAACAAAATCA+CGG - chr5_1:17754187-17754206 None:intergenic 30.0%
CAAACTAGAATCAAACAGAA+AGG - chr5_1:17754202-17754221 None:intergenic 30.0%
! GGAAGTTTCGACATATTTTT+CGG + chr5_1:17754320-17754339 Msa0721290:CDS 30.0%
! GAAGTTTCGACATATTTTTC+GGG + chr5_1:17754321-17754340 Msa0721290:CDS 30.0%
! AAGTTTCGACATATTTTTCG+GGG + chr5_1:17754322-17754341 Msa0721290:CDS 30.0%
GTTACAGTATCTTGTTAGTT+TGG + chr5_1:17754377-17754396 Msa0721290:intron 30.0%
AAAAACTCACCCATATTATG+TGG + chr5_1:17754459-17754478 Msa0721290:intron 30.0%
AGTTGTTGACCACATAATAT+GGG - chr5_1:17754471-17754490 None:intergenic 30.0%
AAGTTGTTGACCACATAATA+TGG - chr5_1:17754472-17754491 None:intergenic 30.0%
TACTAAATTAATTGCGCATC+AGG - chr5_1:17754765-17754784 None:intergenic 30.0%
TTAGTAAAGTTAGTAGTCAC+TGG + chr5_1:17754779-17754798 Msa0721290:intron 30.0%
GCATACCATTAATGACTTTA+AGG + chr5_1:17754808-17754827 Msa0721290:intron 30.0%
!! CATTAATGACTTTAAGGTCT+GGG + chr5_1:17754814-17754833 Msa0721290:intron 30.0%
!!! CCTTTTTTATAGGCAAAAGT+TGG - chr5_1:17754986-17755005 None:intergenic 30.0%
! CCAACTTTTGCCTATAAAAA+AGG + chr5_1:17754983-17755002 Msa0721290:intron 30.0%
!!! ACTGCACCATTTTTTCATAA+CGG - chr5_1:17755204-17755223 None:intergenic 30.0%
GTACTATTCATGTTTCTCAT+GGG - chr5_1:17755255-17755274 None:intergenic 30.0%
! CCATATTAAGCCTATTGATT+TGG - chr5_1:17755310-17755329 None:intergenic 30.0%
CCAAATCAATAGGCTTAATA+TGG + chr5_1:17755307-17755326 Msa0721290:intron 30.0%
! TTTTGGATTGACAATGAGTT+TGG + chr5_1:17755384-17755403 Msa0721290:intron 30.0%
!! CTTTTTGGAGATGAAAATCA+CGG - chr5_1:17755426-17755445 None:intergenic 30.0%
ATGTGCATTGCATTAACATT+TGG + chr5_1:17755751-17755770 Msa0721290:intron 30.0%
AAATTCCTTAAAACACCATC+AGG + chr5_1:17755885-17755904 Msa0721290:intron 30.0%
! CAATCAAAGTATTAGGTATG+TGG - chr5_1:17756270-17756289 None:intergenic 30.0%
CATACCTAATACTTTGATTG+AGG + chr5_1:17756270-17756289 Msa0721290:intron 30.0%
! TTTTACTACGTGTTTGAAGA+AGG + chr5_1:17756348-17756367 Msa0721290:intron 30.0%
AAACTGAATCCTATCTGATA+TGG + chr5_1:17756394-17756413 Msa0721290:intron 30.0%
! GTTGGTGAAATTATTCTGTT+AGG + chr5_1:17756444-17756463 Msa0721290:intron 30.0%
GGAAATTGGTCATATGTAAA+AGG + chr5_1:17756465-17756484 Msa0721290:intron 30.0%
CAAATAAAATCTACCAACAC+TGG - chr5_1:17756733-17756752 None:intergenic 30.0%
!!! CAGTGTTGGTAGATTTTATT+TGG + chr5_1:17756731-17756750 Msa0721290:intron 30.0%
!! GATTTTATTTGGTACCTTAG+TGG + chr5_1:17756742-17756761 Msa0721290:intron 30.0%
TAAAACAGAAACACAACACT+AGG + chr5_1:17756966-17756985 Msa0721290:intron 30.0%
TATTGCTTCCTTATCATTTC+AGG + chr5_1:17757108-17757127 Msa0721290:intron 30.0%
!! TACTTTTTATTCCTCATCGA+TGG + chr5_1:17757248-17757267 Msa0721290:intron 30.0%
! TGAAAAGAATCAGCTTCTTT+TGG + chr5_1:17757319-17757338 Msa0721290:CDS 30.0%
! GAAAAGAATCAGCTTCTTTT+GGG + chr5_1:17757320-17757339 Msa0721290:CDS 30.0%
TTAGAAAACAAACACAACCT+TGG - chr5_1:17757479-17757498 None:intergenic 30.0%
! GTACACAGCTTTGATATATT+TGG - chr5_1:17757601-17757620 None:intergenic 30.0%
! TCTCTGAACGTATATTGATT+TGG + chr5_1:17757714-17757733 Msa0721290:intron 30.0%
AAAATTGCCAATGTATTGTG+AGG + chr5_1:17757817-17757836 Msa0721290:intron 30.0%
ATATCAACCTCACAATACAT+TGG - chr5_1:17757827-17757846 None:intergenic 30.0%
CACTACATCTATATTCTCTA+TGG + chr5_1:17758020-17758039 Msa0721290:intron 30.0%
TACATCTATATTCTCTATGG+TGG + chr5_1:17758023-17758042 Msa0721290:intron 30.0%
CTATGGTGGTAAATTTAACT+TGG + chr5_1:17758037-17758056 Msa0721290:intron 30.0%
!!! TGTTTTGAAAAATTGGCATC+CGG + chr5_1:17758104-17758123 Msa0721290:intron 30.0%
TCTCAGATCCCAAAATTTAA+AGG - chr5_1:17758222-17758241 None:intergenic 30.0%
!!! TTTCTATTTTGACTACCTTC+AGG - chr5_1:17758271-17758290 None:intergenic 30.0%
TTAGTAGCTGTAATTGATAG+TGG + chr5_1:17758401-17758420 Msa0721290:intron 30.0%
! TAGTAGCTGTAATTGATAGT+GGG + chr5_1:17758402-17758421 Msa0721290:intron 30.0%
ATCAAACTAGAATAGTGTTG+TGG - chr5_1:17758451-17758470 None:intergenic 30.0%
CTTAAAAATTAGGTCACGAT+TGG - chr5_1:17758594-17758613 None:intergenic 30.0%
! TCTCTAACACACTCTTTTAT+TGG + chr5_1:17758631-17758650 Msa0721290:intron 30.0%
ATGCTGCATGCAAATAAAAA+AGG - chr5_1:17758864-17758883 None:intergenic 30.0%
TATAACTAGCATAAGTGACA+TGG + chr5_1:17759083-17759102 Msa0721290:CDS 30.0%
ACAAAAAACCTCATGGTTTA+AGG - chr5_1:17759378-17759397 None:intergenic 30.0%
CTAAGATTACAGAAATATGC+AGG - chr5_1:17759419-17759438 None:intergenic 30.0%
AAATAACTAGTTGATCGAGA+AGG - chr5_1:17759446-17759465 None:intergenic 30.0%
TCCATATATTAGAAAGGTCT+TGG + chr5_1:17759580-17759599 Msa0721290:intron 30.0%
ACCAAGACCTTTCTAATATA+TGG - chr5_1:17759584-17759603 None:intergenic 30.0%
ATGGATGAAACAAGATAAAC+AGG - chr5_1:17759628-17759647 None:intergenic 30.0%
! AATTTAATGCCCTTAGGTTT+TGG - chr5_1:17759934-17759953 None:intergenic 30.0%
TAAGGAAATTTAATGCCCTT+AGG - chr5_1:17759940-17759959 None:intergenic 30.0%
TTTGTCTCCTTTCTTTACAA+AGG + chr5_1:17760043-17760062 Msa0721290:CDS 30.0%
ACAACATCCTTTGTAAAGAA+AGG - chr5_1:17760053-17760072 None:intergenic 30.0%
! CTTAACTCCATGAATTTTCA+AGG + chr5_1:17760140-17760159 Msa0721290:CDS 30.0%
TTAATAGATCTACATTCCCT+TGG - chr5_1:17760271-17760290 None:intergenic 30.0%
AAGGGAATGTAGATCTATTA+AGG + chr5_1:17760270-17760289 Msa0721290:CDS 30.0%
AATAATATCATGCAACCACA+AGG + chr5_1:17760398-17760417 Msa0721290:CDS 30.0%
!!! AAATCTGGTTTTGAGTATGA+CGG - chr5_1:17760572-17760591 None:intergenic 30.0%
AAACCAGATTTCATAGATTC+AGG + chr5_1:17760581-17760600 Msa0721290:CDS 30.0%
! TTTTCACAGGTATACAAATC+AGG + chr5_1:17761160-17761179 Msa0721290:intron 30.0%
TATACAAATCAGGTTCAGTA+GGG + chr5_1:17761170-17761189 Msa0721290:CDS 30.0%
AGTTAGTGGAATAGTTAGAT+TGG - chr5_1:17761490-17761509 None:intergenic 30.0%
CTCTTACTAATAGTAGTTAG+TGG - chr5_1:17761504-17761523 None:intergenic 30.0%
TCCTGAAGATATTCAGAAAA+TGG + chr5_1:17761755-17761774 Msa0721290:CDS 30.0%
CCTGAAGATATTCAGAAAAT+GGG + chr5_1:17761756-17761775 Msa0721290:CDS 30.0%
CAAAAGAAAGACGAAAAACT+TGG + chr5_1:17762082-17762101 Msa0721290:three_prime_UTR 30.0%
AAAGAAAGACGAAAAACTTG+GGG + chr5_1:17762084-17762103 Msa0721290:three_prime_UTR 30.0%
!! TAACACCATATTTCTGCTTT+TGG - chr5_1:17762142-17762161 None:intergenic 30.0%
! GACACAAGTGAGAGATTTTT+GGG - chr5_1:17752364-17752383 None:intergenic 35.0%
! AGACACAAGTGAGAGATTTT+TGG - chr5_1:17752365-17752384 None:intergenic 35.0%
TGTCTCTATCAGAAAGTGAT+TGG + chr5_1:17752380-17752399 Msa0721290:five_prime_UTR 35.0%
!!! GAAGTAAAGTCCTTGTTTTG+TGG - chr5_1:17752406-17752425 None:intergenic 35.0%
! TTTCACTTGGTTTCCTCTTT+TGG + chr5_1:17752558-17752577 Msa0721290:five_prime_UTR 35.0%
!!! TTTCCTCTTTTGGCTCATAA+GGG + chr5_1:17752568-17752587 Msa0721290:five_prime_UTR 35.0%
!!! CCCATGATGTTGGTTTTTTA+AGG + chr5_1:17752745-17752764 Msa0721290:five_prime_UTR 35.0%
!!! TTTTTTTTGCGTGTGTGTGT+TGG + chr5_1:17752793-17752812 Msa0721290:five_prime_UTR 35.0%
!!! TTTTTTTGCGTGTGTGTGTT+GGG + chr5_1:17752794-17752813 Msa0721290:five_prime_UTR 35.0%
GTTATGAAGCTTTCAACATC+AGG + chr5_1:17752973-17752992 Msa0721290:exon 35.0%
CATGTATAAAATTCGCTCGA+GGG - chr5_1:17753123-17753142 None:intergenic 35.0%
ACATGTATAAAATTCGCTCG+AGG - chr5_1:17753124-17753143 None:intergenic 35.0%
AGTGTTTGAATTCTGAGCTA+TGG + chr5_1:17753376-17753395 Msa0721290:CDS 35.0%
!! GAAGTTGGTAGAGAAACTAA+GGG - chr5_1:17753417-17753436 None:intergenic 35.0%
!! TGAAGTTGGTAGAGAAACTA+AGG - chr5_1:17753418-17753437 None:intergenic 35.0%
TTAGTTTCTCTACCAACTTC+AGG + chr5_1:17753417-17753436 Msa0721290:CDS 35.0%
TAGTTTCTCTACCAACTTCA+GGG + chr5_1:17753418-17753437 Msa0721290:CDS 35.0%
GATTGAAAGAGACTCAAATG+TGG + chr5_1:17753581-17753600 Msa0721290:intron 35.0%
! ATCAATTTCTCTGTTGGTTG+TGG - chr5_1:17753679-17753698 None:intergenic 35.0%
ACAACCAACAGAGAAATTGA+TGG + chr5_1:17753678-17753697 Msa0721290:CDS 35.0%
TTGTCCATCAATTTCTCTGT+TGG - chr5_1:17753685-17753704 None:intergenic 35.0%
CTGAATTCATTCACTTCTGT+TGG - chr5_1:17753829-17753848 None:intergenic 35.0%
! TGTTTTCTTCGTGTAATGAG+AGG + chr5_1:17753963-17753982 Msa0721290:intron 35.0%
GAAAGATACGTTTCTTCCTA+TGG + chr5_1:17754029-17754048 Msa0721290:CDS 35.0%
ACGTTTCTTCCTATGGAATT+AGG + chr5_1:17754036-17754055 Msa0721290:CDS 35.0%
CGTTTCTTCCTATGGAATTA+GGG + chr5_1:17754037-17754056 Msa0721290:CDS 35.0%
! TAATTTGTAGGCTGCTTACT+TGG - chr5_1:17754066-17754085 None:intergenic 35.0%
! TGAGAAAGTTTTTCCTCCAT+TGG + chr5_1:17754155-17754174 Msa0721290:CDS 35.0%
TGCTCAAGAACTAATTGCTA+GGG + chr5_1:17754279-17754298 Msa0721290:CDS 35.0%
CCAGACCTTAAAGTCATTAA+TGG - chr5_1:17754816-17754835 None:intergenic 35.0%
!! CCATTAATGACTTTAAGGTC+TGG + chr5_1:17754813-17754832 Msa0721290:intron 35.0%
TATAACTTAGTGTCCCACAT+AGG + chr5_1:17754874-17754893 Msa0721290:intron 35.0%
!! ATAGGCAAAAGTTGGTAAGA+TGG - chr5_1:17754978-17754997 None:intergenic 35.0%
GTCCTTAAAATTGTGACCAT+CGG + chr5_1:17755137-17755156 Msa0721290:intron 35.0%
GGTACTATTCATGTTTCTCA+TGG - chr5_1:17755256-17755275 None:intergenic 35.0%
!! ACGTTAAAAGTACCGTGAAT+TGG - chr5_1:17755551-17755570 None:intergenic 35.0%
! TCACGGTACTTTTAACGTAT+TGG + chr5_1:17755553-17755572 Msa0721290:intron 35.0%
TGCATATTGCTTTCTCTATC+CGG - chr5_1:17755618-17755637 None:intergenic 35.0%
GTTCCAACGCTTATTAAAAG+TGG - chr5_1:17755720-17755739 None:intergenic 35.0%
!! TTTAATAAGCGTTGGAACAC+TGG + chr5_1:17755722-17755741 Msa0721290:intron 35.0%
!! TTAATAAGCGTTGGAACACT+GGG + chr5_1:17755723-17755742 Msa0721290:intron 35.0%
ATGTTAATGCAATGCACATG+TGG - chr5_1:17755750-17755769 None:intergenic 35.0%
! CAACCCTCAATCAAAGTATT+AGG - chr5_1:17756277-17756296 None:intergenic 35.0%
CATTTCACTCCATATCAGAT+AGG - chr5_1:17756406-17756425 None:intergenic 35.0%
CTATCTGATATGGAGTGAAA+TGG + chr5_1:17756404-17756423 Msa0721290:intron 35.0%
ACACAAGATAGTTGAGTTAC+TGG + chr5_1:17756533-17756552 Msa0721290:intron 35.0%
CAACTTTGAACCAGGAAAAA+GGG - chr5_1:17756934-17756953 None:intergenic 35.0%
! GAGATTCTGTGCTTTTCATT+TGG + chr5_1:17757199-17757218 Msa0721290:CDS 35.0%
! AGCAACTAATAGCTGCTTTA+CGG + chr5_1:17757442-17757461 Msa0721290:CDS 35.0%
TTACGGTGTTCTTTAATCCA+AGG + chr5_1:17757459-17757478 Msa0721290:CDS 35.0%
GCTTTGATATATTTGGAGAG+TGG - chr5_1:17757594-17757613 None:intergenic 35.0%
ATCTGCATCTATACTCTCTA+AGG + chr5_1:17757851-17757870 Msa0721290:intron 35.0%
! GAGGCAAGTTTATTGATAAC+TGG + chr5_1:17757873-17757892 Msa0721290:intron 35.0%
ACAAAAATCAAACAGTAGCC+TGG - chr5_1:17758087-17758106 None:intergenic 35.0%
!! TAATTAACCAGTAGCCTTGT+GGG - chr5_1:17758160-17758179 None:intergenic 35.0%
! TTAATTAACCAGTAGCCTTG+TGG - chr5_1:17758161-17758180 None:intergenic 35.0%
! AAGGCTACTGGTTAATTAAC+TGG + chr5_1:17758162-17758181 Msa0721290:intron 35.0%
AAAACATGTAACACAGGCAA+AGG - chr5_1:17758327-17758346 None:intergenic 35.0%
!!! TTTTTTTTGGGTATTTCGGC+TGG - chr5_1:17758521-17758540 None:intergenic 35.0%
GGGTCCCATATAAATTTAGT+AGG + chr5_1:17758667-17758686 Msa0721290:intron 35.0%
TTACATACCATGGTGAATGT+AGG - chr5_1:17758807-17758826 None:intergenic 35.0%
TGACTTATTCAACTGCTATG+CGG + chr5_1:17758904-17758923 Msa0721290:intron 35.0%
ATAGCGTTGTGGAAAACTAA+AGG - chr5_1:17758933-17758952 None:intergenic 35.0%
!! TAACGGATTGCAGAAAATAG+AGG - chr5_1:17758987-17759006 None:intergenic 35.0%
TCCTTCGAAACATAAGACTA+AGG + chr5_1:17759206-17759225 Msa0721290:intron 35.0%
CCTTCGAAACATAAGACTAA+GGG + chr5_1:17759207-17759226 Msa0721290:intron 35.0%
AAGGGAGAATGTTAGTACAA+TGG + chr5_1:17759225-17759244 Msa0721290:intron 35.0%
! AATGGTAACTTTGCTGTCTT+GGG + chr5_1:17759243-17759262 Msa0721290:intron 35.0%
CTCATGGTTTAAGGATGAAA+AGG - chr5_1:17759369-17759388 None:intergenic 35.0%
! CTTTTCATCCTTAAACCATG+AGG + chr5_1:17759367-17759386 Msa0721290:intron 35.0%
! TTTAGTTCACCTTCTTGACT+AGG + chr5_1:17759523-17759542 Msa0721290:intron 35.0%
CCATTAAAACCTAGTCAAGA+AGG - chr5_1:17759535-17759554 None:intergenic 35.0%
!! CCTTCTTGACTAGGTTTTAA+TGG + chr5_1:17759532-17759551 Msa0721290:intron 35.0%
!! GACTAGGTTTTAATGGTTCA+AGG + chr5_1:17759539-17759558 Msa0721290:intron 35.0%
TTGTTTCATCCATTGTGCAT+AGG + chr5_1:17759635-17759654 Msa0721290:intron 35.0%
!! GGAAATAGTGATGGATACAT+TGG - chr5_1:17759738-17759757 None:intergenic 35.0%
AATCTAAGGGGAAATAGTGA+TGG - chr5_1:17759747-17759766 None:intergenic 35.0%
ACAGCCAACTTTCATAATGA+GGG - chr5_1:17760000-17760019 None:intergenic 35.0%
ACAAAGGATGTTGTTACAGA+TGG + chr5_1:17760059-17760078 Msa0721290:CDS 35.0%
AATTCATGGAGTTAAGACCA+TGG - chr5_1:17760136-17760155 None:intergenic 35.0%
TGATCATTTCCTAGCAAAGT+TGG - chr5_1:17760203-17760222 None:intergenic 35.0%
!! CCTGATTGTTGATAGTTGAA+AGG - chr5_1:17760320-17760339 None:intergenic 35.0%
CCTTTCAACTATCAACAATC+AGG + chr5_1:17760317-17760336 Msa0721290:CDS 35.0%
GATAACTTTGTTGCTGTGTT+TGG - chr5_1:17760487-17760506 None:intergenic 35.0%
ATGCCTGAATCTATGAAATC+TGG - chr5_1:17760587-17760606 None:intergenic 35.0%
TTGGTTCACTTTCTTCTGAA+GGG + chr5_1:17760645-17760664 Msa0721290:CDS 35.0%
CTGTTGAATTTATCCAGAAG+TGG + chr5_1:17760677-17760696 Msa0721290:CDS 35.0%
! CCCAAACAGAACAGAATTTT+GGG - chr5_1:17760852-17760871 None:intergenic 35.0%
CCCAAAATTCTGTTCTGTTT+GGG + chr5_1:17760849-17760868 Msa0721290:CDS 35.0%
CCAAAATTCTGTTCTGTTTG+GGG + chr5_1:17760850-17760869 Msa0721290:CDS 35.0%
AGATGATGCAGTAGTATAAC+GGG - chr5_1:17760918-17760937 None:intergenic 35.0%
GAGATGATGCAGTAGTATAA+CGG - chr5_1:17760919-17760938 None:intergenic 35.0%
AAAAGAAAGGCTGAAAAAGC+TGG - chr5_1:17761108-17761127 None:intergenic 35.0%
GTATACAAATCAGGTTCAGT+AGG + chr5_1:17761169-17761188 Msa0721290:CDS 35.0%
TTTGAAGATCCTCTTAGATC+AGG + chr5_1:17761274-17761293 Msa0721290:CDS 35.0%
! AGAGGCATATTCAATGCTAT+AGG + chr5_1:17761625-17761644 Msa0721290:intron 35.0%
! CCCATTTTCTGAATATCTTC+AGG - chr5_1:17761759-17761778 None:intergenic 35.0%
TATTCAAGTGAGCCTAATGA+TGG - chr5_1:17761870-17761889 None:intergenic 35.0%
! AAAAACTTGGGGCAAACTTT+TGG + chr5_1:17762095-17762114 Msa0721290:three_prime_UTR 35.0%
TGGCACACAAGTTTACAAAT+TGG - chr5_1:17762122-17762141 None:intergenic 35.0%
ACTGCTATTGTTGTAGCATT+TGG + chr5_1:17762161-17762180 Msa0721290:three_prime_UTR 35.0%
GAAATTTCAACTACTCGTGT+GGG - chr5_1:17762263-17762282 None:intergenic 35.0%
! AAGTGATTGGCCACAAAACA+AGG + chr5_1:17752393-17752412 Msa0721290:five_prime_UTR 40.0%
!!! GTTTCCTCTTTTGGCTCATA+AGG + chr5_1:17752567-17752586 Msa0721290:five_prime_UTR 40.0%
!! TAATGGGTTTGGGGAAATTG+AGG + chr5_1:17752861-17752880 Msa0721290:five_prime_UTR 40.0%
TGAAGTTGGCATATCAACTG+AGG - chr5_1:17753732-17753751 None:intergenic 40.0%
CTTGGAATCCCTAATTCCAT+AGG - chr5_1:17754048-17754067 None:intergenic 40.0%
AAAATCACGGACACTACCAA+TGG - chr5_1:17754174-17754193 None:intergenic 40.0%
!! TCTTTCTATTTGGGTTGTGC+AGG + chr5_1:17754237-17754256 Msa0721290:intron 40.0%
! CTAGCAATTAGTTCTTGAGC+AGG - chr5_1:17754280-17754299 None:intergenic 40.0%
CTGCTCAAGAACTAATTGCT+AGG + chr5_1:17754278-17754297 Msa0721290:CDS 40.0%
GAAACTTCCACTCAACATCA+TGG - chr5_1:17754309-17754328 None:intergenic 40.0%
!! TTTTGTTGTGTGAAGTGCCA+TGG - chr5_1:17754442-17754461 None:intergenic 40.0%
TATTTGGGTATTCCCATCCT+AGG + chr5_1:17754663-17754682 Msa0721290:intron 40.0%
ATCAAGATCCTACCTAGGAT+GGG - chr5_1:17754678-17754697 None:intergenic 40.0%
TCAAGATCAAGATCCTACCT+AGG - chr5_1:17754683-17754702 None:intergenic 40.0%
TTAATTGCGCATCAGGATTC+TGG - chr5_1:17754758-17754777 None:intergenic 40.0%
TTGGTGAGCTAAGGGATAAA+GGG + chr5_1:17754905-17754924 Msa0721290:intron 40.0%
AAGGGATAAAGGGTTTGAGA+AGG + chr5_1:17754915-17754934 Msa0721290:intron 40.0%
! AGTTTCCAGGGTTTAAAACC+TGG - chr5_1:17754945-17754964 None:intergenic 40.0%
! CACCGATGGTCACAATTTTA+AGG - chr5_1:17755142-17755161 None:intergenic 40.0%
!! ATTTGGATTGGCAGTGAGTT+TGG - chr5_1:17755488-17755507 None:intergenic 40.0%
!! AATTGGTTTGCAGTTCCCTA+GGG - chr5_1:17755534-17755553 None:intergenic 40.0%
!!! TGGCCACTTTTAATAAGCGT+TGG + chr5_1:17755714-17755733 Msa0721290:intron 40.0%
TTTATAGCCCATTTCCCTCT+TGG + chr5_1:17755808-17755827 Msa0721290:intron 40.0%
CTTGCCAAACTTTCTGATGT+GGG + chr5_1:17755834-17755853 Msa0721290:intron 40.0%
AAGTCCCACATCAGAAAGTT+TGG - chr5_1:17755841-17755860 None:intergenic 40.0%
!! CTGTTCCTGATGGTGTTTTA+AGG - chr5_1:17755893-17755912 None:intergenic 40.0%
! TATGTGGGAGCATACATAGT+TGG - chr5_1:17756254-17756273 None:intergenic 40.0%
! ACCTGGTTTGCAATTCACTT+CGG - chr5_1:17756324-17756343 None:intergenic 40.0%
ACACGTAGTAAAAAGTCACC+TGG - chr5_1:17756341-17756360 None:intergenic 40.0%
! TGGAGTGAAATGGTTCTGTT+CGG + chr5_1:17756414-17756433 Msa0721290:intron 40.0%
GCGAATAATCTCTCAATGTG+AGG + chr5_1:17756585-17756604 Msa0721290:intron 40.0%
AACACAACTTATGGGTTCAC+TGG + chr5_1:17756698-17756717 Msa0721290:intron 40.0%
AAATCTACCAACACTGGCAA+CGG - chr5_1:17756727-17756746 None:intergenic 40.0%
GACACATAGAAGTTCCACTA+AGG - chr5_1:17756759-17756778 None:intergenic 40.0%
CCAACTTTGAACCAGGAAAA+AGG - chr5_1:17756935-17756954 None:intergenic 40.0%
! CCTTTTTCCTGGTTCAAAGT+TGG + chr5_1:17756932-17756951 Msa0721290:intron 40.0%
TTGGCTGTCCTGAAATGATA+AGG - chr5_1:17757119-17757138 None:intergenic 40.0%
AGTGCAAAAAGACTAGTAGC+TGG + chr5_1:17757177-17757196 Msa0721290:CDS 40.0%
! GATGATGGCATAACAGTTTG+TGG - chr5_1:17757365-17757384 None:intergenic 40.0%
TCGCTTGAAAGAACTGATGA+TGG - chr5_1:17757380-17757399 None:intergenic 40.0%
! TGCATCTATACTCTCTAAGG+AGG + chr5_1:17757854-17757873 Msa0721290:intron 40.0%
GGTCATTAAATAGATCCACC+AGG + chr5_1:17758066-17758085 Msa0721290:intron 40.0%
AAAATCAAACAGTAGCCTGG+TGG - chr5_1:17758084-17758103 None:intergenic 40.0%
GGATCTGAGAAGAGCAAAAA+AGG + chr5_1:17758232-17758251 Msa0721290:intron 40.0%
!!! CTATTTTGACTACCTTCAGG+TGG - chr5_1:17758268-17758287 None:intergenic 40.0%
CTGTGGCTCCAAAAAAACTT+AGG + chr5_1:17758370-17758389 Msa0721290:intron 40.0%
!! GGGTTTTGATGAATCTGCTA+TGG + chr5_1:17758422-17758441 Msa0721290:intron 40.0%
AATAGCGACCGTTATTCTTC+CGG + chr5_1:17758479-17758498 Msa0721290:intron 40.0%
AGCAGAAACCGGAAGAATAA+CGG - chr5_1:17758490-17758509 None:intergenic 40.0%
CATTACTCCTACATTCACCA+TGG + chr5_1:17758797-17758816 Msa0721290:intron 40.0%
TGAAATAGCAGATAGCGTTG+TGG - chr5_1:17758944-17758963 None:intergenic 40.0%
GTGCTGTCAAGTGTCAATAA+CGG - chr5_1:17759004-17759023 None:intergenic 40.0%
TAAGTGACATGGATCCTGTT+CGG + chr5_1:17759094-17759113 Msa0721290:CDS 40.0%
ACAGACCTCCAATGAGAATT+TGG - chr5_1:17759123-17759142 None:intergenic 40.0%
TTCTCATTGGAGGTCTGTTA+AGG + chr5_1:17759125-17759144 Msa0721290:CDS 40.0%
!! CCCTTAGTCTTATGTTTCGA+AGG - chr5_1:17759210-17759229 None:intergenic 40.0%
! CAATGGTAACTTTGCTGTCT+TGG + chr5_1:17759242-17759261 Msa0721290:intron 40.0%
! GATTTGTGTTGCTGTATTCC+AGG - chr5_1:17759482-17759501 None:intergenic 40.0%
TTCATCCATTGTGCATAGGT+TGG + chr5_1:17759639-17759658 Msa0721290:intron 40.0%
CATGGTCGTTTCAATCTAAG+GGG - chr5_1:17759759-17759778 None:intergenic 40.0%
CCATGGTCGTTTCAATCTAA+GGG - chr5_1:17759760-17759779 None:intergenic 40.0%
AACTTTCATAATGAGGGGGT+AGG - chr5_1:17759994-17760013 None:intergenic 40.0%
TACCCCCTCATTATGAAAGT+TGG + chr5_1:17759993-17760012 Msa0721290:intron 40.0%
AGCCAACTTTCATAATGAGG+GGG - chr5_1:17759998-17760017 None:intergenic 40.0%
CAGCCAACTTTCATAATGAG+GGG - chr5_1:17759999-17760018 None:intergenic 40.0%
CACAGCCAACTTTCATAATG+AGG - chr5_1:17760001-17760020 None:intergenic 40.0%
CTCATTATGAAAGTTGGCTG+TGG + chr5_1:17759999-17760018 Msa0721290:intron 40.0%
ATTATGAAAGTTGGCTGTGG+TGG + chr5_1:17760002-17760021 Msa0721290:intron 40.0%
!! TCCATGAATTTTCAAGGTGC+TGG + chr5_1:17760146-17760165 Msa0721290:CDS 40.0%
TCCAGCACCTTGAAAATTCA+TGG - chr5_1:17760150-17760169 None:intergenic 40.0%
GATTGTTGTGCGATTTCTGA+AGG - chr5_1:17760457-17760476 None:intergenic 40.0%
!! AACTAGAGTGTTGCTTCTGA+TGG - chr5_1:17760541-17760560 None:intergenic 40.0%
CTTGGTTCACTTTCTTCTGA+AGG + chr5_1:17760644-17760663 Msa0721290:CDS 40.0%
AACAGTCACCTCAACAATCA+TGG + chr5_1:17760717-17760736 Msa0721290:CDS 40.0%
ACAGTCACCTCAACAATCAT+GGG + chr5_1:17760718-17760737 Msa0721290:CDS 40.0%
TACGATCGATGTATCTCTTC+CGG - chr5_1:17760807-17760826 None:intergenic 40.0%
GCCCAAAATTCTGTTCTGTT+TGG + chr5_1:17760848-17760867 Msa0721290:CDS 40.0%
! CCCCAAACAGAACAGAATTT+TGG - chr5_1:17760853-17760872 None:intergenic 40.0%
ATGATGCAGTAGTATAACGG+GGG - chr5_1:17760916-17760935 None:intergenic 40.0%
GATGATGCAGTAGTATAACG+GGG - chr5_1:17760917-17760936 None:intergenic 40.0%
GAATCTTGCATGCAAGGATA+TGG - chr5_1:17760992-17761011 None:intergenic 40.0%
TCCTTGCATGCAAGATTCAT+CGG + chr5_1:17760994-17761013 Msa0721290:CDS 40.0%
! GCTCAGATGTTTGGAATTGA+GGG + chr5_1:17761247-17761266 Msa0721290:CDS 40.0%
! CTCAGATGTTTGGAATTGAG+GGG + chr5_1:17761248-17761267 Msa0721290:CDS 40.0%
GAACTCTATACTTACTCCCA+CGG - chr5_1:17761355-17761374 None:intergenic 40.0%
TGGCACTTAATATGAGACAG+AGG - chr5_1:17761397-17761416 None:intergenic 40.0%
CAACGCTTAATATGAGACAG+AGG + chr5_1:17761607-17761626 Msa0721290:intron 40.0%
TTCATCCTTTGTCCAGAACT+TGG - chr5_1:17761807-17761826 None:intergenic 40.0%
GAATCTCACGACATTGTTTC+TGG + chr5_1:17761840-17761859 Msa0721290:CDS 40.0%
! GTTTCTGGACTACCATCATT+AGG + chr5_1:17761855-17761874 Msa0721290:CDS 40.0%
AAGTATTCCTTCAGATCCCA+CGG + chr5_1:17761906-17761925 Msa0721290:three_prime_UTR 40.0%
GTGTGCCAAAAGCAGAAATA+TGG + chr5_1:17762134-17762153 Msa0721290:three_prime_UTR 40.0%
TGACCCTTATGAGCCAAAAG+AGG - chr5_1:17752574-17752593 None:intergenic 45.0%
TCACATGGATCCCATGATGT+TGG + chr5_1:17752735-17752754 Msa0721290:five_prime_UTR 45.0%
GATGGAGTGCATTGGAAAGT+GGG + chr5_1:17752816-17752835 Msa0721290:five_prime_UTR 45.0%
GGTTTGGGGAAATTGAGGAT+GGG + chr5_1:17752866-17752885 Msa0721290:five_prime_UTR 45.0%
GTTTGGGGAAATTGAGGATG+GGG + chr5_1:17752867-17752886 Msa0721290:five_prime_UTR 45.0%
AACATCAGGAATGAGTCAGC+AGG + chr5_1:17752987-17753006 Msa0721290:CDS 45.0%
ACATCAGGAATGAGTCAGCA+GGG + chr5_1:17752988-17753007 Msa0721290:CDS 45.0%
CCAACAAGGAGCTCAGAATA+GGG - chr5_1:17753181-17753200 None:intergenic 45.0%
CCTATTCTGAGCTCCTTGTT+GGG + chr5_1:17753179-17753198 Msa0721290:intron 45.0%
CTATTCTGAGCTCCTTGTTG+GGG + chr5_1:17753180-17753199 Msa0721290:intron 45.0%
TATTCTGAGCTCCTTGTTGG+GGG + chr5_1:17753181-17753200 Msa0721290:intron 45.0%
AGTTGGCATATCAACTGAGG+CGG - chr5_1:17753729-17753748 None:intergenic 45.0%
AGTGATACAAGCACACATGG+AGG + chr5_1:17754108-17754127 Msa0721290:CDS 45.0%
GTGATACAAGCACACATGGA+GGG + chr5_1:17754109-17754128 Msa0721290:CDS 45.0%
! GCAATTAGTTCTTGAGCAGG+AGG - chr5_1:17754277-17754296 None:intergenic 45.0%
GATCAAGATCCTACCTAGGA+TGG - chr5_1:17754679-17754698 None:intergenic 45.0%
AGTTAGTAGTCACTGGTGTC+TGG + chr5_1:17754786-17754805 Msa0721290:intron 45.0%
! GTTGGTGAGCTAAGGGATAA+AGG + chr5_1:17754904-17754923 Msa0721290:intron 45.0%
GGATAAAGGGTTTGAGAAGG+AGG + chr5_1:17754918-17754937 Msa0721290:intron 45.0%
!! AGTTGGTAAGATGGTGGCTA+TGG - chr5_1:17754969-17754988 None:intergenic 45.0%
!! GGCAAAAGTTGGTAAGATGG+TGG - chr5_1:17754975-17754994 None:intergenic 45.0%
ATTGTGACCATCGGTGATTG+TGG + chr5_1:17755146-17755165 Msa0721290:intron 45.0%
ATAACAGCCACAATCACCGA+TGG - chr5_1:17755156-17755175 None:intergenic 45.0%
CAATGAGTTTGGCGAAGTCA+CGG + chr5_1:17755395-17755414 Msa0721290:intron 45.0%
ACATAATTCACCACACCCCT+AGG + chr5_1:17755515-17755534 Msa0721290:intron 45.0%
CATAATTCACCACACCCCTA+GGG + chr5_1:17755516-17755535 Msa0721290:intron 45.0%
!! ATTGGTTTGCAGTTCCCTAG+GGG - chr5_1:17755533-17755552 None:intergenic 45.0%
!! GAATTGGTTTGCAGTTCCCT+AGG - chr5_1:17755535-17755554 None:intergenic 45.0%
GGGAACTGCAAACCAATTCA+CGG + chr5_1:17755536-17755555 Msa0721290:intron 45.0%
CAAGCAACCAAGAGGGAAAT+GGG - chr5_1:17755818-17755837 None:intergenic 45.0%
AGTTTGGCAAGCAACCAAGA+GGG - chr5_1:17755825-17755844 None:intergenic 45.0%
AAGTTTGGCAAGCAACCAAG+AGG - chr5_1:17755826-17755845 None:intergenic 45.0%
GCTTGCCAAACTTTCTGATG+TGG + chr5_1:17755833-17755852 Msa0721290:intron 45.0%
CACCATCAGGAACAGAATGT+AGG + chr5_1:17755898-17755917 Msa0721290:intron 45.0%
TGCCTACATTCTGTTCCTGA+TGG - chr5_1:17755903-17755922 None:intergenic 45.0%
ATTCACTTCGGTACGTGGTA+AGG - chr5_1:17756312-17756331 None:intergenic 45.0%
TTGCAATTCACTTCGGTACG+TGG - chr5_1:17756317-17756336 None:intergenic 45.0%
ACCGAAGTGAATTGCAAACC+AGG + chr5_1:17756320-17756339 Msa0721290:intron 45.0%
GTTCTGTTCGGAAAGTCTGT+TGG + chr5_1:17756426-17756445 Msa0721290:intron 45.0%
!! TTACTGGCTTTGCCACTTCT+TGG + chr5_1:17756549-17756568 Msa0721290:intron 45.0%
GTGCAACATTAGCCAAGAAG+TGG - chr5_1:17756564-17756583 None:intergenic 45.0%
! AGTGAGTTTGCCCTTTTTCC+TGG + chr5_1:17756921-17756940 Msa0721290:intron 45.0%
GGAAACACCAACTTTGAACC+AGG - chr5_1:17756942-17756961 None:intergenic 45.0%
!!! GTGGTAAGAAGGTGTCGTTT+TGG - chr5_1:17757138-17757157 None:intergenic 45.0%
AAACGACACCTTCTTACCAC+AGG + chr5_1:17757138-17757157 Msa0721290:CDS 45.0%
AACAAATACACTCCAGCCTG+TGG - chr5_1:17757157-17757176 None:intergenic 45.0%
CATAACAGTTTGTGGCCTAC+TGG - chr5_1:17757357-17757376 None:intergenic 45.0%
TCAAGCGATAGCATGCACAT+TGG + chr5_1:17757392-17757411 Msa0721290:CDS 45.0%
TGAAACCTACATCATGGGCA+GGG + chr5_1:17757545-17757564 Msa0721290:intron 45.0%
AGTGGTATGACGAATTCGGA+TGG - chr5_1:17757576-17757595 None:intergenic 45.0%
GGAGAGTGGTATGACGAATT+CGG - chr5_1:17757580-17757599 None:intergenic 45.0%
TACCATACACGCGTTTCTGT+CGG + chr5_1:17757618-17757637 Msa0721290:CDS 45.0%
TTTCTGTCGGTATGCGTTTC+AGG + chr5_1:17757631-17757650 Msa0721290:CDS 45.0%
ATGATGGCAACAAGTACCTG+CGG - chr5_1:17757686-17757705 None:intergenic 45.0%
GAATAACGGTCGCTATTGCT+TGG - chr5_1:17758476-17758495 None:intergenic 45.0%
TGGCATGAACTAGCAGAAAC+CGG - chr5_1:17758501-17758520 None:intergenic 45.0%
AAGGAAATTGAGGCAGTACG+TGG - chr5_1:17758845-17758864 None:intergenic 45.0%
GTGGCACATGCATAAGTAGA+GGG - chr5_1:17759038-17759057 None:intergenic 45.0%
ATGTACCTGCACAAACAAGG+TGG - chr5_1:17759057-17759076 None:intergenic 45.0%
! ACCTTGTTTGTGCAGGTACA+TGG + chr5_1:17759056-17759075 Msa0721290:intron 45.0%
! CCTTGTTTGTGCAGGTACAT+GGG + chr5_1:17759057-17759076 Msa0721290:intron 45.0%
TTCGGTGGCCAAATTCTCAT+TGG + chr5_1:17759112-17759131 Msa0721290:CDS 45.0%
! TTTGAGCTCTAGTCATGACG+TGG + chr5_1:17759268-17759287 Msa0721290:intron 45.0%
!! TCCATTGTGCATAGGTTGGT+TGG + chr5_1:17759643-17759662 Msa0721290:intron 45.0%
!! CCATTGTGCATAGGTTGGTT+GGG + chr5_1:17759644-17759663 Msa0721290:intron 45.0%
ATTTCCCATAACGATACCCG+TGG - chr5_1:17759696-17759715 None:intergenic 45.0%
CCCTTAGATTGAAACGACCA+TGG + chr5_1:17759757-17759776 Msa0721290:CDS 45.0%
GCCATGGTCGTTTCAATCTA+AGG - chr5_1:17759761-17759780 None:intergenic 45.0%
!! CCAAGAAAAGAAGAAGTGCC+AGG - chr5_1:17759786-17759805 None:intergenic 45.0%
! CCTGGCACTTCTTCTTTTCT+TGG + chr5_1:17759783-17759802 Msa0721290:CDS 45.0%
!!! TAGGTTTTGGACACGACGAA+AGG - chr5_1:17759921-17759940 None:intergenic 45.0%
TTCGTCGTGTCCAAAACCTA+AGG + chr5_1:17759921-17759940 Msa0721290:intron 45.0%
TCGTCGTGTCCAAAACCTAA+GGG + chr5_1:17759922-17759941 Msa0721290:intron 45.0%
TGTTACAGATGGCAGAGATG+AGG + chr5_1:17760070-17760089 Msa0721290:CDS 45.0%
!! AGGCAACTAATGGACTGATG+TGG + chr5_1:17760090-17760109 Msa0721290:CDS 45.0%
AGCAAAGTTGGATCGAGTCT+TGG - chr5_1:17760191-17760210 None:intergenic 45.0%
AGACTCGATCCAACTTTGCT+AGG + chr5_1:17760191-17760210 Msa0721290:CDS 45.0%
TCAGCAATACCAAGCCATGT+TGG + chr5_1:17760226-17760245 Msa0721290:CDS 45.0%
!!! GGTTTTGAGTATGACGGTGA+AGG - chr5_1:17760566-17760585 None:intergenic 45.0%
!! AGGCATGAAGTTTGCTGCTT+CGG + chr5_1:17760601-17760620 Msa0721290:CDS 45.0%
!!! GAACCAAGCATGTTTTGACC+CGG - chr5_1:17760632-17760651 None:intergenic 45.0%
! TCACTTTCTTCTGAAGGGAG+TGG + chr5_1:17760650-17760669 Msa0721290:CDS 45.0%
CAGCATAGAATGACCACTTC+TGG - chr5_1:17760693-17760712 None:intergenic 45.0%
! TTTGAGGCCCATGATTGTTG+AGG - chr5_1:17760728-17760747 None:intergenic 45.0%
CTGCGAAGGTGAATACTTTG+AGG - chr5_1:17760744-17760763 None:intergenic 45.0%
! CTCAAAGTATTCACCTTCGC+AGG + chr5_1:17760742-17760761 Msa0721290:CDS 45.0%
ATGCGACATCGAATTGCCAA+TGG - chr5_1:17760774-17760793 None:intergenic 45.0%
ATGTCGCATGTGCAGTATTC+CGG + chr5_1:17760785-17760804 Msa0721290:CDS 45.0%
ACATCGATCGTACAACCACA+TGG + chr5_1:17760815-17760834 Msa0721290:CDS 45.0%
TAACGGCATTGTCGATGCAT+CGG - chr5_1:17760945-17760964 None:intergenic 45.0%
! ATGCATCGACAATGCCGTTA+GGG + chr5_1:17760945-17760964 Msa0721290:CDS 45.0%
TGGAAACTAGACTCCCCTAA+CGG - chr5_1:17760962-17760981 None:intergenic 45.0%
! TTAGGGGAGTCTAGTTTCCA+GGG + chr5_1:17760962-17760981 Msa0721290:CDS 45.0%
TCCGATGAATCTTGCATGCA+AGG - chr5_1:17760998-17761017 None:intergenic 45.0%
! CCTTCACAAATATCGGTGTC+TGG - chr5_1:17761057-17761076 None:intergenic 45.0%
CCAGACACCGATATTTGTGA+AGG + chr5_1:17761054-17761073 Msa0721290:CDS 45.0%
! GGCTCAGATGTTTGGAATTG+AGG + chr5_1:17761246-17761265 Msa0721290:CDS 45.0%
AAGATCCTCTTAGATCAGGC+TGG + chr5_1:17761278-17761297 Msa0721290:CDS 45.0%
GCAGCTTGTATTTGTCGACA+GGG + chr5_1:17761300-17761319 Msa0721290:CDS 45.0%
GAGAACGATGTTCTTCTCCT+TGG + chr5_1:17761322-17761341 Msa0721290:CDS 45.0%
GAAGAAGCCATAGAATCCCT+TGG + chr5_1:17761780-17761799 Msa0721290:CDS 45.0%
ACTTGGACCAAGGGATTCTA+TGG - chr5_1:17761790-17761809 None:intergenic 45.0%
TTGTCCAGAACTTGGACCAA+GGG - chr5_1:17761799-17761818 None:intergenic 45.0%
TTTGTCCAGAACTTGGACCA+AGG - chr5_1:17761800-17761819 None:intergenic 45.0%
!! TTGGTCCAAGTTCTGGACAA+AGG + chr5_1:17761799-17761818 Msa0721290:CDS 45.0%
!! GTAGTTGTCGATTTGACCGT+GGG - chr5_1:17761925-17761944 None:intergenic 45.0%
!! AGTAGTTGTCGATTTGACCG+TGG - chr5_1:17761926-17761945 None:intergenic 45.0%
!!! ATTAATTTTAAATAAAAGAA+AGG - chr5_1:17761121-17761140 None:intergenic 5.0%
TTTGCGTGTGTGTGTTGGGA+TGG + chr5_1:17752798-17752817 Msa0721290:five_prime_UTR 50.0%
TGTGTTGGGATGGAGTGCAT+TGG + chr5_1:17752808-17752827 Msa0721290:five_prime_UTR 50.0%
GGATGGAGTGCATTGGAAAG+TGG + chr5_1:17752815-17752834 Msa0721290:five_prime_UTR 50.0%
TGCATTGGAAAGTGGGAGAG+AGG + chr5_1:17752823-17752842 Msa0721290:five_prime_UTR 50.0%
GGGTTTGGGGAAATTGAGGA+TGG + chr5_1:17752865-17752884 Msa0721290:five_prime_UTR 50.0%
AGGATGGGGACTCTGAGTTA+GGG + chr5_1:17752881-17752900 Msa0721290:five_prime_UTR 50.0%
ATGAGTCAGCAGGGTCATGA+AGG + chr5_1:17752997-17753016 Msa0721290:CDS 50.0%
CCCTATTCTGAGCTCCTTGT+TGG + chr5_1:17753178-17753197 Msa0721290:intron 50.0%
CCCAACAAGGAGCTCAGAAT+AGG - chr5_1:17753182-17753201 None:intergenic 50.0%
ATTCTGAGCTCCTTGTTGGG+GGG + chr5_1:17753182-17753201 Msa0721290:intron 50.0%
TGAGCTATGGCATGCATGTG+CGG + chr5_1:17753389-17753408 Msa0721290:CDS 50.0%
CGTGTGGTTTACTTCCCTCA+AGG + chr5_1:17753444-17753463 Msa0721290:CDS 50.0%
CCTGCTCACTATGACCTTGA+GGG - chr5_1:17753461-17753480 None:intergenic 50.0%
ACCTGCTCACTATGACCTTG+AGG - chr5_1:17753462-17753481 None:intergenic 50.0%
GGCGGCAAGCTAGGATAATT+CGG - chr5_1:17753711-17753730 None:intergenic 50.0%
GGATAACGTACCGGAGTCAA+CGG - chr5_1:17753924-17753943 None:intergenic 50.0%
GCGAGTGATACAAGCACACA+TGG + chr5_1:17754105-17754124 Msa0721290:CDS 50.0%
ATCACGGACACTACCAATGG+AGG - chr5_1:17754171-17754190 None:intergenic 50.0%
GGGATCTCCATGATGTTGAG+TGG + chr5_1:17754299-17754318 Msa0721290:CDS 50.0%
CACTGTATGCGGACTTTCCA+TGG + chr5_1:17754422-17754441 Msa0721290:intron 50.0%
TGGGTATTCCCATCCTAGGT+AGG + chr5_1:17754667-17754686 Msa0721290:intron 50.0%
AGTGTCCCACATAGGTCACT+CGG + chr5_1:17754882-17754901 Msa0721290:intron 50.0%
ACCAACCGAGTGACCTATGT+GGG - chr5_1:17754890-17754909 None:intergenic 50.0%
!! TCACTCGGTTGGTGAGCTAA+GGG + chr5_1:17754897-17754916 Msa0721290:intron 50.0%
!!! GAGGTCCAGGTTTTAAACCC+TGG + chr5_1:17754937-17754956 Msa0721290:intron 50.0%
GGTGGCTATGGTAGTTTCCA+GGG - chr5_1:17754957-17754976 None:intergenic 50.0%
TGGTGGCTATGGTAGTTTCC+AGG - chr5_1:17754958-17754977 None:intergenic 50.0%
GTTCACACAAAACCGAGCAC+CGG + chr5_1:17755596-17755615 Msa0721290:intron 50.0%
TGCTTTCTCTATCCGGTGCT+CGG - chr5_1:17755611-17755630 None:intergenic 50.0%
GCAAGCAACCAAGAGGGAAA+TGG - chr5_1:17755819-17755838 None:intergenic 50.0%
AGCAGTTTGCACCATCGATG+AGG - chr5_1:17757262-17757281 None:intergenic 50.0%
TACCGACAGAAACGCGTGTA+TGG - chr5_1:17757623-17757642 None:intergenic 50.0%
CTGAAGAATCAAGTGTCCGC+AGG + chr5_1:17757667-17757686 Msa0721290:CDS 50.0%
TCCAAGAGCCGACTAATCCA+AGG + chr5_1:17758127-17758146 Msa0721290:intron 50.0%
CCAAGAGCCGACTAATCCAA+GGG + chr5_1:17758128-17758147 Msa0721290:intron 50.0%
!! GATCGGTCCCTTGGATTAGT+CGG - chr5_1:17758138-17758157 None:intergenic 50.0%
!! AACCAGTAGCCTTGTGGGAT+CGG - chr5_1:17758155-17758174 None:intergenic 50.0%
GGTTAGCAGTTACCACCTGA+AGG + chr5_1:17758253-17758272 Msa0721290:intron 50.0%
GACAATGGCACTTAGCAGGT+TGG - chr5_1:17758294-17758313 None:intergenic 50.0%
ACGAGACAATGGCACTTAGC+AGG - chr5_1:17758298-17758317 None:intergenic 50.0%
! AAAGGCGCAGTACGAGACAA+TGG - chr5_1:17758309-17758328 None:intergenic 50.0%
GGTGGCACATGCATAAGTAG+AGG - chr5_1:17759039-17759058 None:intergenic 50.0%
! ATGTGCCACCTTGTTTGTGC+AGG + chr5_1:17759049-17759068 Msa0721290:intron 50.0%
CCCATGTACCTGCACAAACA+AGG - chr5_1:17759060-17759079 None:intergenic 50.0%
TGAGAATTTGGCCACCGAAC+AGG - chr5_1:17759111-17759130 None:intergenic 50.0%
GGTGGCCAAATTCTCATTGG+AGG + chr5_1:17759115-17759134 Msa0721290:CDS 50.0%
CCCAACCAACCTATGCACAA+TGG - chr5_1:17759647-17759666 None:intergenic 50.0%
GTTGGGATGAATCGACAGCT+GGG + chr5_1:17759661-17759680 Msa0721290:CDS 50.0%
TTGGGATGAATCGACAGCTG+GGG + chr5_1:17759662-17759681 Msa0721290:CDS 50.0%
! ACAGCCACGGGTATCGTTAT+GGG + chr5_1:17759689-17759708 Msa0721290:CDS 50.0%
TTGAAACGACCATGGCATCC+TGG + chr5_1:17759765-17759784 Msa0721290:CDS 50.0%
!! GTTTTGGACACGACGAAAGG+AGG - chr5_1:17759918-17759937 None:intergenic 50.0%
!! AGTTGGCTGTGGTGGTTTTG+AGG + chr5_1:17760010-17760029 Msa0721290:intron 50.0%
GGCAGAGATGAGGCAACTAA+TGG + chr5_1:17760080-17760099 Msa0721290:CDS 50.0%
!! AATGGACTGATGTGGATGCG+AGG + chr5_1:17760098-17760117 Msa0721290:CDS 50.0%
GAGTTAAGACCATGGTCTCC+AGG - chr5_1:17760128-17760147 None:intergenic 50.0%
!! CTGCTGGTTTGCAGAACCAA+GGG + chr5_1:17760252-17760271 Msa0721290:CDS 50.0%
TGCTGTTGCTGAAGCTGCAT+AGG - chr5_1:17760353-17760372 None:intergenic 50.0%
ATCATGCAACCACAAGGCCA+AGG + chr5_1:17760404-17760423 Msa0721290:CDS 50.0%
TCATGCAACCACAAGGCCAA+GGG + chr5_1:17760405-17760424 Msa0721290:CDS 50.0%
AAAGATTCTCCGCTAGCCCT+TGG - chr5_1:17760424-17760443 None:intergenic 50.0%
!! GAGTGTTGCTTCTGATGGAG+CGG - chr5_1:17760536-17760555 None:intergenic 50.0%
! GTTTGCTGCTTCGGTTTCAC+CGG + chr5_1:17760610-17760629 Msa0721290:CDS 50.0%
! TTTGCTGCTTCGGTTTCACC+GGG + chr5_1:17760611-17760630 Msa0721290:CDS 50.0%
TCACCGGGTCAAAACATGCT+TGG + chr5_1:17760626-17760645 Msa0721290:CDS 50.0%
!! GGGGTCAATATCGATTCGTC+TGG + chr5_1:17760869-17760888 Msa0721290:CDS 50.0%
! TATAACGGGGGACAGTGGTA+GGG - chr5_1:17760904-17760923 None:intergenic 50.0%
! AGTAGTATAACGGGGGACAG+TGG - chr5_1:17760909-17760928 None:intergenic 50.0%
! GATGCATCGACAATGCCGTT+AGG + chr5_1:17760944-17760963 Msa0721290:CDS 50.0%
! TGCATCGACAATGCCGTTAG+GGG + chr5_1:17760946-17760965 Msa0721290:CDS 50.0%
! GTTAGGGGAGTCTAGTTTCC+AGG + chr5_1:17760961-17760980 Msa0721290:CDS 50.0%
TGCAAGGATATGGAGAACCC+TGG - chr5_1:17760982-17761001 None:intergenic 50.0%
TCGGAGTTGTTGCAAAGTGC+AGG + chr5_1:17761013-17761032 Msa0721290:CDS 50.0%
CGGAGTTGTTGCAAAGTGCA+GGG + chr5_1:17761014-17761033 Msa0721290:CDS 50.0%
GAAAGGCTGAAAAAGCTGGC+AGG - chr5_1:17761104-17761123 None:intergenic 50.0%
TCAACAGCTATCACGAGCTG+CGG + chr5_1:17761215-17761234 Msa0721290:CDS 50.0%
! GAGGAGTTGGCTCAGATGTT+TGG + chr5_1:17761238-17761257 Msa0721290:CDS 50.0%
GGCAGCTTGTATTTGTCGAC+AGG + chr5_1:17761299-17761318 Msa0721290:CDS 50.0%
GAATCCCTTGGTCCAAGTTC+TGG + chr5_1:17761792-17761811 Msa0721290:CDS 50.0%
GGACAAAGGATGAACAACGC+TGG + chr5_1:17761813-17761832 Msa0721290:CDS 50.0%
GATTTGACCGTGGGATCTGA+AGG - chr5_1:17761916-17761935 None:intergenic 50.0%
GAGGATGGGGACTCTGAGTT+AGG + chr5_1:17752880-17752899 Msa0721290:five_prime_UTR 55.0%
TTCTGAGCTCCTTGTTGGGG+GGG + chr5_1:17753183-17753202 Msa0721290:intron 55.0%
GAGCTATGGCATGCATGTGC+GGG + chr5_1:17753390-17753409 Msa0721290:CDS 55.0%
ACCAACTTCAGGGACTCGTG+TGG + chr5_1:17753428-17753447 Msa0721290:CDS 55.0%
ACCACACGAGTCCCTGAAGT+TGG - chr5_1:17753432-17753451 None:intergenic 55.0%
CCCTCAAGGTCATAGTGAGC+AGG + chr5_1:17753458-17753477 Msa0721290:CDS 55.0%
ATCAACTGAGGCGGCAAGCT+AGG - chr5_1:17753720-17753739 None:intergenic 55.0%
ACTTTCTCAGCTGCACGACG+AGG - chr5_1:17754144-17754163 None:intergenic 55.0%
TCCCACATAGGTCACTCGGT+TGG + chr5_1:17754886-17754905 Msa0721290:intron 55.0%
CACCAACCGAGTGACCTATG+TGG - chr5_1:17754891-17754910 None:intergenic 55.0%
!! GTCACTCGGTTGGTGAGCTA+AGG + chr5_1:17754896-17754915 Msa0721290:intron 55.0%
AGGGTTTGAGAAGGAGGTCC+AGG + chr5_1:17754924-17754943 Msa0721290:intron 55.0%
GAGTTTGGCAGGATCGCAGT+GGG - chr5_1:17755473-17755492 None:intergenic 55.0%
TGAGTTTGGCAGGATCGCAG+TGG - chr5_1:17755474-17755493 None:intergenic 55.0%
! GGATTGGCAGTGAGTTTGGC+AGG - chr5_1:17755484-17755503 None:intergenic 55.0%
TTTGCAGTTCCCTAGGGGTG+TGG - chr5_1:17755528-17755547 None:intergenic 55.0%
GACACCTTCTTACCACAGGC+TGG + chr5_1:17757142-17757161 Msa0721290:CDS 55.0%
CACTCCAGCCTGTGGTAAGA+AGG - chr5_1:17757149-17757168 None:intergenic 55.0%
TGGGAATACGTCGTGCCAGT+AGG + chr5_1:17757339-17757358 Msa0721290:CDS 55.0%
ACTAGCCCTGCCCATGATGT+AGG - chr5_1:17757553-17757572 None:intergenic 55.0%
!! GGATTAGTCGGCTCTTGGAC+CGG - chr5_1:17758126-17758145 None:intergenic 55.0%
!! CCCTTGGATTAGTCGGCTCT+TGG - chr5_1:17758131-17758150 None:intergenic 55.0%
GGGATGCGAGCTTCTTACTG+TGG + chr5_1:17758353-17758372 Msa0721290:intron 55.0%
GTGACATGGATCCTGTTCGG+TGG + chr5_1:17759097-17759116 Msa0721290:CDS 55.0%
GGTTGGGATGAATCGACAGC+TGG + chr5_1:17759660-17759679 Msa0721290:CDS 55.0%
! GACAGCCACGGGTATCGTTA+TGG + chr5_1:17759688-17759707 Msa0721290:CDS 55.0%
!! GAAGAAGTGCCAGGATGCCA+TGG - chr5_1:17759777-17759796 None:intergenic 55.0%
ATGAGGGGGTAGGAGACACT+AGG - chr5_1:17759984-17760003 None:intergenic 55.0%
!! AAGGTGCTGGATTGTTGCCC+TGG + chr5_1:17760159-17760178 Msa0721290:CDS 55.0%
TCGAGTCTTGGCTGCATCCA+GGG - chr5_1:17760179-17760198 None:intergenic 55.0%
ATCGAGTCTTGGCTGCATCC+AGG - chr5_1:17760180-17760199 None:intergenic 55.0%
CAAACCAGCAGCAGCCAACA+TGG - chr5_1:17760243-17760262 None:intergenic 55.0%
!! GCTGCTGGTTTGCAGAACCA+AGG + chr5_1:17760251-17760270 Msa0721290:CDS 55.0%
GCTGAAGCTGCATAGGACTG+AGG - chr5_1:17760346-17760365 None:intergenic 55.0%
CCAATGGCATCAACCTGCGA+AGG - chr5_1:17760758-17760777 None:intergenic 55.0%
!! CCTTCGCAGGTTGATGCCAT+TGG + chr5_1:17760755-17760774 Msa0721290:CDS 55.0%
TGGGCATCTGAGTTGCCATG+TGG - chr5_1:17760833-17760852 None:intergenic 55.0%
! GTATAACGGGGGACAGTGGT+AGG - chr5_1:17760905-17760924 None:intergenic 55.0%
CAACAGCTATCACGAGCTGC+GGG + chr5_1:17761216-17761235 Msa0721290:CDS 55.0%
AGCTGCCAGCCTGATCTAAG+AGG - chr5_1:17761286-17761305 None:intergenic 55.0%
TTCTCCTTGGAGACGATCCG+TGG + chr5_1:17761335-17761354 Msa0721290:CDS 55.0%
TCTCCTTGGAGACGATCCGT+GGG + chr5_1:17761336-17761355 Msa0721290:CDS 55.0%
TACAGCAGACCCCCCCAACA+AGG - chr5_1:17753195-17753214 None:intergenic 60.0%
!! GACGCTACAGCCGTTGACTC+CGG + chr5_1:17753911-17753930 Msa0721290:CDS 60.0%
GCGCATCAGGATTCTGGCGA+AGG - chr5_1:17754752-17754771 None:intergenic 60.0%
CTGGTCTCCGTTGCCAGTGT+TGG + chr5_1:17756717-17756736 Msa0721290:intron 60.0%
TCCAAGGGACCGATCCCACA+AGG + chr5_1:17758143-17758162 Msa0721290:intron 60.0%
GACCGATCCCACAAGGCTAC+TGG + chr5_1:17758150-17758169 Msa0721290:intron 60.0%
GGACTGATGTGGATGCGAGG+CGG + chr5_1:17760101-17760120 Msa0721290:CDS 60.0%
CAGCAGCAGCCAACATGGCT+TGG - chr5_1:17760238-17760257 None:intergenic 60.0%
! CAAGCCATGTTGGCTGCTGC+TGG + chr5_1:17760236-17760255 Msa0721290:CDS 60.0%
ACCACAAGGCCAAGGGCTAG+CGG + chr5_1:17760412-17760431 Msa0721290:CDS 60.0%
GGACAGTGGTAGGGAGCAGA+AGG - chr5_1:17760895-17760914 None:intergenic 60.0%
GGCGCTCACTTGACATCTCG+CGG + chr5_1:17761191-17761210 Msa0721290:CDS 60.0%
ACTCCCACGGATCGTCTCCA+AGG - chr5_1:17761342-17761361 None:intergenic 60.0%
GCCTTGTGGGATCGGTCCCT+TGG - chr5_1:17758147-17758166 None:intergenic 65.0%
CAGCTGGGGAGAGACAGCCA+CGG + chr5_1:17759676-17759695 Msa0721290:CDS 65.0%
AGCTGGGGAGAGACAGCCAC+GGG + chr5_1:17759677-17759696 Msa0721290:CDS 65.0%
ATGTGGATGCGAGGCGGTCC+TGG + chr5_1:17760107-17760126 Msa0721290:CDS 65.0%
!! TCCGCTAGCCCTTGGCCTTG+TGG - chr5_1:17760416-17760435 None:intergenic 65.0%
CAGCTATCACGAGCTGCGGG+AGG + chr5_1:17761219-17761238 Msa0721290:CDS 65.0%
TCACGAGCTGCGGGAGGAGT+TGG + chr5_1:17761225-17761244 Msa0721290:CDS 65.0%
CGAGGCGGTCCTGGAGACCA+TGG + chr5_1:17760116-17760135 Msa0721290:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 17752345 17762282 17752345 ID=Msa0721290;Name=Msa0721290
chr5_1 mRNA 17752345 17762282 17752345 ID=Msa0721290-mRNA-1;Parent=Msa0721290;Name=Msa0721290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=631|0.92|0.92|1|1|1|14|389|863
chr5_1 exon 17752345 17753018 17752345 ID=Msa0721290-mRNA-1:exon:6773;Parent=Msa0721290-mRNA-1
chr5_1 exon 17753364 17753479 17753364 ID=Msa0721290-mRNA-1:exon:6774;Parent=Msa0721290-mRNA-1
chr5_1 exon 17753669 17753767 17753669 ID=Msa0721290-mRNA-1:exon:6775;Parent=Msa0721290-mRNA-1
chr5_1 exon 17753876 17753932 17753876 ID=Msa0721290-mRNA-1:exon:6776;Parent=Msa0721290-mRNA-1
chr5_1 exon 17754021 17754176 17754021 ID=Msa0721290-mRNA-1:exon:6777;Parent=Msa0721290-mRNA-1
chr5_1 exon 17754259 17754343 17754259 ID=Msa0721290-mRNA-1:exon:6778;Parent=Msa0721290-mRNA-1
chr5_1 exon 17757130 17757220 17757130 ID=Msa0721290-mRNA-1:exon:6779;Parent=Msa0721290-mRNA-1
chr5_1 exon 17757316 17757480 17757316 ID=Msa0721290-mRNA-1:exon:6780;Parent=Msa0721290-mRNA-1
chr5_1 exon 17757566 17757688 17757566 ID=Msa0721290-mRNA-1:exon:6781;Parent=Msa0721290-mRNA-1
chr5_1 exon 17759071 17759146 17759071 ID=Msa0721290-mRNA-1:exon:6782;Parent=Msa0721290-mRNA-1
chr5_1 exon 17759657 17759804 17759657 ID=Msa0721290-mRNA-1:exon:6783;Parent=Msa0721290-mRNA-1
chr5_1 exon 17760012 17761075 17760012 ID=Msa0721290-mRNA-1:exon:6784;Parent=Msa0721290-mRNA-1
chr5_1 exon 17761169 17761359 17761169 ID=Msa0721290-mRNA-1:exon:6785;Parent=Msa0721290-mRNA-1
chr5_1 exon 17761716 17762282 17761716 ID=Msa0721290-mRNA-1:exon:6786;Parent=Msa0721290-mRNA-1
chr5_1 five_prime_UTR 17752345 17752975 17752345 ID=Msa0721290-mRNA-1:five_prime_utr;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17752976 17753018 17752976 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17753364 17753479 17753364 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17753669 17753767 17753669 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17753876 17753932 17753876 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17754021 17754176 17754021 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17754259 17754343 17754259 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17757130 17757220 17757130 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17757316 17757480 17757316 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17757566 17757688 17757566 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17759071 17759146 17759071 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17759657 17759804 17759657 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17760012 17761075 17760012 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17761169 17761359 17761169 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 CDS 17761716 17761893 17761716 ID=Msa0721290-mRNA-1:cds;Parent=Msa0721290-mRNA-1
chr5_1 three_prime_UTR 17761894 17762282 17761894 ID=Msa0721290-mRNA-1:three_prime_utr;Parent=Msa0721290-mRNA-1
Gene Sequence

>Msa0721290

ATGAAGCTTTCAACATCAGGAATGAGTCAGCAGGGTCATGAAGGAGGGGAGAAAAAGTGTTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCCTTAGTTTCTCTACCAACTTCAGGGACTCGTGTGGTTTACTTCCCTCAAGGTCATAGTGAGCAGGTTTCTGCCACAACCAACAGAGAAATTGATGGACAAATTCCGAATTATCCTAGCTTGCCGCCTCAGTTGATATGCCAACTTCATAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAGATGACGCTACAGCCGTTGACTCCGCAAGAGCAGAAAGATACGTTTCTTCCTATGGAATTAGGGATTCCAAGTAAGCAGCCTACAAATTATTTTTGCAAGACATTGACGGCGAGTGATACAAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTTCCTCCATTGGATTTCTCACAGCAACCTCCTGCTCAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATTTTTCGGGGACAGCCAAAACGACACCTTCTTACCACAGGCTGGAGTGTATTTGTTAGTGCAAAAAGACTAGTAGCTGGAGATTCTGTGCTTTTCATTTGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAGTAGGCCACAAACTGTTATGCCATCATCAGTTCTTTCAAGCGATAGCATGCACATTGGACTTCTTGCAGCTGCAGCACATGCTGCAGCAACTAATAGCTGCTTTACGGTGTTCTTTAATCCAAGGGCTAGTCCATCCGAATTCGTCATACCACTCTCCAAATATATCAAAGCTGTGTACCATACACGCGTTTCTGTCGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCCAAATTCTCATTGGAGGTCTGTTAAGGTTGGTTGGGATGAATCGACAGCTGGGGAGAGACAGCCACGGGTATCGTTATGGGAAATTGAGCCCTTAACTACATTTCCAATGTATCCATCACTATTTCCCCTTAGATTGAAACGACCATGGCATCCTGGCACTTCTTCTTTTCTTGTTGGCTGTGGTGGTTTTGAGGACACACTTCTTTTGTCTCCTTTCTTTACAAAGGATGTTGTTACAGATGGCAGAGATGAGGCAACTAATGGACTGATGTGGATGCGAGGCGGTCCTGGAGACCATGGTCTTAACTCCATGAATTTTCAAGGTGCTGGATTGTTGCCCTGGATGCAGCCAAGACTCGATCCAACTTTGCTAGGAAATGATCATAATCAGCAATACCAAGCCATGTTGGCTGCTGCTGGTTTGCAGAACCAAGGGAATGTAGATCTATTAAGGCAACAGATGATGAATTTTCAACAGCCTTTCAACTATCAACAATCAGGAAACCTCAGTCCTATGCAGCTTCAGCAACAGCAAGCAATTCAACAATCCGTATCGACTAATAATATCATGCAACCACAAGGCCAAGGGCTAGCGGAGAATCTTTCTCAGCACATCCTTCAGAAATCGCACAACAATCGTGAAAACCAAACACAGCAACAAAGTTATCAAGATTCAGTTTTAATTCAAGGTGATCCGCTCCATCAGAAGCAACACTCTAGTTTGCCTTCACCGTCATACTCAAAACCAGATTTCATAGATTCAGGCATGAAGTTTGCTGCTTCGGTTTCACCGGGTCAAAACATGCTTGGTTCACTTTCTTCTGAAGGGAGTGGCAATCTGTTGAATTTATCCAGAAGTGGTCATTCTATGCTGACTGAACAGTCACCTCAACAATCATGGGCCTCAAAGTATTCACCTTCGCAGGTTGATGCCATTGGCAATTCGATGTCGCATGTGCAGTATTCCGGAAGAGATACATCGATCGTACAACCACATGGCAACTCAGATGCCCAAAATTCTGTTCTGTTTGGGGTCAATATCGATTCGTCTGGCCTTCTGCTCCCTACCACTGTCCCCCGTTATACTACTGCATCATCTCATGCCGATGCATCGACAATGCCGTTAGGGGAGTCTAGTTTCCAGGGTTCTCCATATCCTTGCATGCAAGATTCATCGGAGTTGTTGCAAAGTGCAGGGCAAGTTGATGCGCAAAACCAGACACCGATATTTGTGAAGGTATACAAATCAGGTTCAGTAGGGCGCTCACTTGACATCTCGCGGTTCAACAGCTATCACGAGCTGCGGGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAATTTGAAGATCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTGAATAATGTTTGGTATATCAAAATACTTTCTCCTGAAGATATTCAGAAAATGGGAGAAGAAGCCATAGAATCCCTTGGTCCAAGTTCTGGACAAAGGATGAACAACGCTGGTGCAGAATCTCACGACATTGTTTCTGGACTACCATCATTAGGCTCACTTGAATACTGA
Protein sequence

>Msa0721290

MKLSTSGMSQQGHEGGEKKCLNSELWHACAGPLVSLPTSGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLVGCGGFEDTLLLSPFFTKDVVTDGRDEATNGLMWMRGGPGDHGLNSMNFQGAGLLPWMQPRLDPTLLGNDHNQQYQAMLAAAGLQNQGNVDLLRQQMMNFQQPFNYQQSGNLSPMQLQQQQAIQQSVSTNNIMQPQGQGLAENLSQHILQKSHNNRENQTQQQSYQDSVLIQGDPLHQKQHSSLPSPSYSKPDFIDSGMKFAASVSPGQNMLGSLSSEGSGNLLNLSRSGHSMLTEQSPQQSWASKYSPSQVDAIGNSMSHVQYSGRDTSIVQPHGNSDAQNSVLFGVNIDSSGLLLPTTVPRYTTASSHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEEAIESLGPSSGQRMNNAGAESHDIVSGLPSLGSLEY*