Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0721480 | XP_027189433.1 | 68.687 | 99 | 29 | 1 | 38 | 134 | 177 | 275 | 4.73e-34 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0721480 | sp|P93024|ARFE_ARATH | 47.586 | 145 | 61 | 4 | 7 | 137 | 178 | 321 | 2.48e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0721480 | A0A3Q7XQ20 | 68.687 | 99 | 29 | 1 | 38 | 134 | 177 | 275 | 2.26e-34 | 136 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0721480 | TF | B3-ARF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0721480 | MtrunA17_Chr1g0156321 | 45.139 | 144 | 66 | 3 | 7 | 137 | 166 | 309 | 1.46e-31 | 120 |
| Msa0721480 | MtrunA17_Chr3g0109391 | 42.029 | 138 | 66 | 3 | 14 | 137 | 156 | 293 | 1.41e-25 | 103 |
| Msa0721480 | MtrunA17_Chr4g0070181 | 42.958 | 142 | 72 | 2 | 7 | 139 | 150 | 291 | 2.03e-25 | 102 |
| Msa0721480 | MtrunA17_Chr2g0285461 | 44.643 | 112 | 56 | 1 | 32 | 137 | 179 | 290 | 1.61e-24 | 100 |
| Msa0721480 | MtrunA17_Chr5g0433301 | 41.304 | 138 | 67 | 3 | 14 | 137 | 154 | 291 | 4.04e-24 | 99.0 |
| Msa0721480 | MtrunA17_Chr8g0376771 | 44.643 | 112 | 56 | 1 | 32 | 137 | 178 | 289 | 2.60e-23 | 96.7 |
| Msa0721480 | MtrunA17_Chr2g0301251 | 44.737 | 114 | 57 | 1 | 32 | 139 | 178 | 291 | 7.33e-23 | 95.1 |
| Msa0721480 | MtrunA17_Chr8g0385791 | 38.519 | 135 | 69 | 3 | 14 | 134 | 188 | 322 | 2.05e-21 | 90.9 |
| Msa0721480 | MtrunA17_Chr8g0389081 | 47.748 | 111 | 52 | 1 | 32 | 136 | 188 | 298 | 7.17e-21 | 89.7 |
| Msa0721480 | MtrunA17_Chr2g0276781 | 42.857 | 105 | 54 | 1 | 32 | 130 | 177 | 281 | 7.31e-21 | 89.4 |
| Msa0721480 | MtrunA17_Chr8g0346711 | 38.298 | 141 | 67 | 5 | 14 | 136 | 157 | 295 | 4.41e-20 | 87.0 |
| Msa0721480 | MtrunA17_Chr4g0029671 | 41.905 | 105 | 55 | 3 | 32 | 130 | 218 | 322 | 3.49e-19 | 84.7 |
| Msa0721480 | MtrunA17_Chr2g0326281 | 41.509 | 106 | 54 | 3 | 32 | 130 | 233 | 337 | 4.59e-19 | 84.3 |
| Msa0721480 | MtrunA17_Chr7g0239061 | 40.367 | 109 | 57 | 2 | 32 | 134 | 168 | 274 | 4.68e-19 | 84.3 |
| Msa0721480 | MtrunA17_Chr4g0009751 | 43.119 | 109 | 54 | 2 | 32 | 134 | 173 | 279 | 4.24e-16 | 75.5 |
| Msa0721480 | MtrunA17_Chr2g0282961 | 34.959 | 123 | 64 | 2 | 32 | 143 | 210 | 327 | 9.44e-16 | 74.7 |
| Msa0721480 | MtrunA17_Chr4g0046371 | 35.965 | 114 | 67 | 2 | 32 | 139 | 200 | 313 | 7.83e-15 | 72.0 |
| Msa0721480 | MtrunA17_Chr1g0199681 | 33.566 | 143 | 55 | 4 | 32 | 134 | 245 | 387 | 7.22e-14 | 69.3 |
| Msa0721480 | MtrunA17_Chr7g0264161 | 35.922 | 103 | 60 | 1 | 32 | 128 | 144 | 246 | 1.12e-13 | 67.8 |
| Msa0721480 | MtrunA17_Chr2g0326761 | 29.452 | 146 | 60 | 3 | 32 | 134 | 160 | 305 | 1.37e-12 | 65.5 |
| Msa0721480 | MtrunA17_Chr1g0178011 | 38.710 | 93 | 52 | 2 | 38 | 125 | 171 | 263 | 5.19e-12 | 63.5 |
| Msa0721480 | MtrunA17_Chr4g0028971 | 29.167 | 168 | 67 | 4 | 32 | 147 | 161 | 328 | 1.77e-11 | 62.4 |
| Msa0721480 | MtrunA17_Chr8g0356211 | 32.653 | 98 | 58 | 2 | 41 | 130 | 55 | 152 | 5.38e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0721480 | AT1G19850.1 | 47.586 | 145 | 61 | 4 | 7 | 137 | 178 | 321 | 2.52e-32 | 122 |
| Msa0721480 | AT1G19850.2 | 47.586 | 145 | 61 | 4 | 7 | 137 | 167 | 310 | 2.69e-32 | 122 |
| Msa0721480 | AT1G19220.1 | 42.254 | 142 | 73 | 2 | 7 | 139 | 150 | 291 | 1.99e-24 | 100 |
| Msa0721480 | AT5G37020.2 | 40.580 | 138 | 68 | 3 | 14 | 137 | 152 | 289 | 6.65e-24 | 98.6 |
| Msa0721480 | AT5G37020.1 | 40.580 | 138 | 68 | 3 | 14 | 137 | 152 | 289 | 7.83e-24 | 98.6 |
| Msa0721480 | AT5G37020.3 | 40.580 | 138 | 68 | 3 | 14 | 137 | 57 | 194 | 9.07e-24 | 98.2 |
| Msa0721480 | AT5G20730.2 | 42.254 | 142 | 73 | 2 | 7 | 139 | 151 | 292 | 1.04e-23 | 98.2 |
| Msa0721480 | AT1G30330.1 | 43.750 | 112 | 57 | 1 | 32 | 137 | 179 | 290 | 3.88e-23 | 96.3 |
| Msa0721480 | AT1G30330.3 | 43.750 | 112 | 57 | 1 | 32 | 137 | 181 | 292 | 4.04e-23 | 96.3 |
| Msa0721480 | AT1G30330.2 | 43.750 | 112 | 57 | 1 | 32 | 137 | 181 | 292 | 4.04e-23 | 96.3 |
| Msa0721480 | AT5G20730.3 | 41.958 | 143 | 73 | 3 | 7 | 139 | 151 | 293 | 4.06e-22 | 93.6 |
| Msa0721480 | AT5G20730.1 | 41.958 | 143 | 73 | 3 | 7 | 139 | 151 | 293 | 4.14e-22 | 93.6 |
| Msa0721480 | AT5G62000.2 | 39.695 | 131 | 65 | 3 | 14 | 130 | 190 | 320 | 1.54e-21 | 91.7 |
| Msa0721480 | AT5G62000.5 | 39.695 | 131 | 65 | 3 | 14 | 130 | 190 | 320 | 1.54e-21 | 91.7 |
| Msa0721480 | AT5G62000.3 | 39.695 | 131 | 65 | 3 | 14 | 130 | 190 | 320 | 1.54e-21 | 91.7 |
| Msa0721480 | AT5G62000.1 | 39.695 | 131 | 65 | 3 | 14 | 130 | 190 | 320 | 1.54e-21 | 91.7 |
| Msa0721480 | AT5G62000.4 | 39.695 | 131 | 65 | 3 | 14 | 130 | 190 | 320 | 1.67e-21 | 91.7 |
| Msa0721480 | AT1G59750.1 | 44.762 | 105 | 52 | 2 | 32 | 130 | 176 | 280 | 6.92e-21 | 89.7 |
| Msa0721480 | AT1G59750.3 | 44.762 | 105 | 52 | 2 | 32 | 130 | 176 | 280 | 6.92e-21 | 89.7 |
| Msa0721480 | AT1G59750.4 | 44.762 | 105 | 52 | 2 | 32 | 130 | 176 | 280 | 7.31e-21 | 89.7 |
| Msa0721480 | AT1G59750.2 | 44.762 | 105 | 52 | 2 | 32 | 130 | 176 | 280 | 7.68e-21 | 89.7 |
| Msa0721480 | AT5G60450.1 | 43.269 | 104 | 54 | 2 | 32 | 130 | 229 | 332 | 9.12e-21 | 89.7 |
| Msa0721480 | AT5G60450.2 | 43.269 | 104 | 54 | 2 | 32 | 130 | 205 | 308 | 9.51e-21 | 89.4 |
| Msa0721480 | AT3G61830.2 | 41.284 | 109 | 56 | 2 | 32 | 134 | 129 | 235 | 1.19e-20 | 89.0 |
| Msa0721480 | AT3G61830.1 | 41.284 | 109 | 56 | 2 | 32 | 134 | 180 | 286 | 1.28e-20 | 89.0 |
| Msa0721480 | AT2G46530.3 | 38.532 | 109 | 59 | 2 | 32 | 134 | 197 | 303 | 6.14e-19 | 84.3 |
| Msa0721480 | AT2G46530.2 | 38.532 | 109 | 59 | 2 | 32 | 134 | 89 | 195 | 6.49e-19 | 84.0 |
| Msa0721480 | AT2G46530.1 | 38.532 | 109 | 59 | 2 | 32 | 134 | 176 | 282 | 8.51e-19 | 84.0 |
| Msa0721480 | AT1G34310.1 | 33.775 | 151 | 85 | 4 | 38 | 175 | 184 | 332 | 1.12e-18 | 83.6 |
| Msa0721480 | AT1G35520.1 | 37.864 | 103 | 56 | 2 | 38 | 134 | 184 | 284 | 5.30e-18 | 81.6 |
| Msa0721480 | AT1G34410.1 | 37.864 | 103 | 56 | 2 | 38 | 134 | 184 | 284 | 6.77e-18 | 81.3 |
| Msa0721480 | AT1G35240.1 | 37.864 | 103 | 56 | 2 | 38 | 134 | 184 | 284 | 8.23e-18 | 80.9 |
| Msa0721480 | AT1G35540.1 | 34.351 | 131 | 70 | 3 | 14 | 130 | 152 | 280 | 5.36e-17 | 78.6 |
| Msa0721480 | AT4G23980.1 | 42.202 | 109 | 55 | 2 | 32 | 134 | 168 | 274 | 7.25e-17 | 78.2 |
| Msa0721480 | AT4G23980.2 | 42.202 | 109 | 55 | 2 | 32 | 134 | 168 | 274 | 7.45e-17 | 78.2 |
| Msa0721480 | AT1G34170.1 | 35.135 | 111 | 62 | 3 | 32 | 134 | 176 | 284 | 1.46e-14 | 71.6 |
| Msa0721480 | AT1G34390.1 | 38.835 | 103 | 55 | 2 | 38 | 134 | 182 | 282 | 1.55e-14 | 71.6 |
| Msa0721480 | AT2G33860.1 | 35.238 | 105 | 62 | 2 | 32 | 130 | 211 | 315 | 8.62e-14 | 69.3 |
| Msa0721480 | AT2G33860.2 | 35.398 | 113 | 63 | 3 | 24 | 130 | 50 | 158 | 9.08e-14 | 69.3 |
| Msa0721480 | AT1G34170.2 | 37.234 | 94 | 51 | 2 | 32 | 117 | 176 | 269 | 3.80e-13 | 67.4 |
| Msa0721480 | AT1G34170.3 | 37.234 | 94 | 51 | 2 | 32 | 117 | 176 | 269 | 5.37e-13 | 67.0 |
Find 36 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCTGAGCCTTCCAATTT+TGG | 0.138979 | 5_1:-18108153 | Msa0721480:CDS |
| CTTCGACATCAAATTCTAAA+AGG | 0.259464 | 5_1:-18102695 | Msa0721480:CDS |
| ATTTGCAACAACCAATAATA+AGG | 0.261060 | 5_1:+18108081 | None:intergenic |
| TGGGCATATTATTAGCATTA+AGG | 0.282629 | 5_1:+18102946 | None:intergenic |
| AGAGTAGCTGGATCCAAAAT+TGG | 0.337383 | 5_1:+18108140 | None:intergenic |
| ATAATTAAGAGCCTTATTAT+TGG | 0.339065 | 5_1:-18108092 | Msa0721480:intron |
| AGAAATCACAATTGCTAGTT+GGG | 0.361412 | 5_1:-18103013 | Msa0721480:CDS |
| TCTAAAAGGCCGTTACAATC+TGG | 0.364573 | 5_1:-18102681 | Msa0721480:CDS |
| CGACCTTGTCGATGGTTCAT+TGG | 0.385094 | 5_1:-18102450 | Msa0721480:CDS |
| AATGACTTTGTTAGCACTAA+AGG | 0.423771 | 5_1:-18107338 | Msa0721480:CDS |
| CTTGTTGACGATGAGAATAA+TGG | 0.424488 | 5_1:-18108117 | Msa0721480:CDS |
| ATTAGCAGCAACAGCATCAA+TGG | 0.430516 | 5_1:+18102926 | None:intergenic |
| TTACCAAGAACGTGTCTCCT+TGG | 0.432993 | 5_1:+18107368 | None:intergenic |
| TACCAAGAACGTGTCTCCTT+GGG | 0.435570 | 5_1:+18107369 | None:intergenic |
| AGATGGTAGTACTCTCAAAA+TGG | 0.438561 | 5_1:-18102492 | Msa0721480:CDS |
| CCGTTACAATCTGGATTGTC+TGG | 0.443879 | 5_1:-18102672 | Msa0721480:intron |
| TACCTTGGATAGTATACAAC+AGG | 0.450471 | 5_1:+18102891 | None:intergenic |
| CACAATTGCTAGTTGGGGTC+AGG | 0.457568 | 5_1:-18103007 | Msa0721480:CDS |
| AGCCCAAGGAGACACGTTCT+TGG | 0.465392 | 5_1:-18107371 | Msa0721480:CDS |
| GAGAAATCACAATTGCTAGT+TGG | 0.465725 | 5_1:-18103014 | Msa0721480:CDS |
| ATCGTCAACAAGAGAGTAGC+TGG | 0.477194 | 5_1:+18108128 | None:intergenic |
| GACACGTTCTTGGTAAAGGC+TGG | 0.487685 | 5_1:-18107361 | Msa0721480:CDS |
| CAGAGCAAGAAGTGCCAAGA+TGG | 0.490365 | 5_1:-18102509 | Msa0721480:CDS |
| AGGAGACACGTTCTTGGTAA+AGG | 0.505249 | 5_1:-18107365 | Msa0721480:CDS |
| CTTGTCGATGGTTCATTGGA+AGG | 0.513298 | 5_1:-18102446 | Msa0721480:CDS |
| AGTGTTACAACTGCTAGAAT+TGG | 0.513320 | 5_1:-18108179 | Msa0721480:CDS |
| TTAGCATTAAGGACTGATGA+TGG | 0.516727 | 5_1:+18102957 | None:intergenic |
| TTCCTGTTGTATACTATCCA+AGG | 0.529097 | 5_1:-18102893 | Msa0721480:intron |
| TGGCACTTCTTGCTCTGAGA+CGG | 0.534388 | 5_1:+18102515 | None:intergenic |
| AGCACTAAAGGACTCGAAGC+AGG | 0.542024 | 5_1:-18107326 | Msa0721480:CDS |
| TTAGCAGCAACAGCATCAAT+GGG | 0.553274 | 5_1:+18102927 | None:intergenic |
| TTGCTTAACGACCTTGTCGA+TGG | 0.582655 | 5_1:-18102458 | Msa0721480:CDS |
| TAGCTGGATCCAAAATTGGA+AGG | 0.625151 | 5_1:+18108144 | None:intergenic |
| GAAATCACAATTGCTAGTTG+GGG | 0.640389 | 5_1:-18103012 | Msa0721480:CDS |
| CCAGACAATCCAGATTGTAA+CGG | 0.653501 | 5_1:+18102672 | None:intergenic |
| CTTCCAATGAACCATCGACA+AGG | 0.693656 | 5_1:+18102447 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAAAATAAAAAT+AGG | - | chr5_1:18103515-18103534 | Msa0721480:intron | 0.0% |
| !! | AAAAATAAAAAATAAAAATA+GGG | - | chr5_1:18103516-18103535 | Msa0721480:intron | 0.0% |
| !! | AAATTCGATTAAGTTAAAAT+TGG | - | chr5_1:18102851-18102870 | Msa0721480:intron | 15.0% |
| !! | AATTCGATTAAGTTAAAATT+GGG | - | chr5_1:18102852-18102871 | Msa0721480:intron | 15.0% |
| !!! | ATGTTGATGTTTTAAAAATA+AGG | + | chr5_1:18102906-18102925 | None:intergenic | 15.0% |
| !!! | TGTATTCTTTTATTTTACTA+TGG | - | chr5_1:18103196-18103215 | Msa0721480:intron | 15.0% |
| !!! | ATAATTTTTTTGTGAAACAT+AGG | + | chr5_1:18103937-18103956 | Msa0721490:CDS | 15.0% |
| !!! | CTTAATCAATTTAGAATATT+TGG | + | chr5_1:18107017-18107036 | None:intergenic | 15.0% |
| !!! | ATCTTGATTATATTTTGTAA+TGG | + | chr5_1:18107486-18107505 | None:intergenic | 15.0% |
| !!! | GATTTTGTGAAAATTATTTA+AGG | - | chr5_1:18107503-18107522 | Msa0721480:intron | 15.0% |
| !!! | ATAATTAAGAGCCTTATTAT+TGG | - | chr5_1:18102532-18102551 | Msa0721480:CDS | 20.0% |
| !! | TTAAACGGGTATTATAAAAA+TGG | + | chr5_1:18102956-18102975 | None:intergenic | 20.0% |
| !! | CTGAAATTAATGAATTAAAC+GGG | + | chr5_1:18102970-18102989 | None:intergenic | 20.0% |
| !! | CCTGAAATTAATGAATTAAA+CGG | + | chr5_1:18102971-18102990 | None:intergenic | 20.0% |
| !! | AAATTTGAACATCAATATAG+TGG | - | chr5_1:18103053-18103072 | Msa0721480:intron | 20.0% |
| !!! | TTTCTTTGAATTTTTTATGC+AGG | - | chr5_1:18103229-18103248 | Msa0721480:intron | 20.0% |
| !! | TAAAAAATAAAAATAGGGAG+AGG | - | chr5_1:18103521-18103540 | Msa0721480:intron | 20.0% |
| !! | ATATCATCTAATGAATGTTT+GGG | + | chr5_1:18104106-18104125 | Msa0721490:CDS | 20.0% |
| !! | TATATCATCTAATGAATGTT+TGG | + | chr5_1:18104107-18104126 | Msa0721490:CDS | 20.0% |
| !! | TTCATTAGATGATATATCAT+TGG | - | chr5_1:18104111-18104130 | Msa0721480:intron | 20.0% |
| !! | TTTACGAAATTTCATAACTA+TGG | + | chr5_1:18104920-18104939 | Msa0721490:CDS | 20.0% |
| !! | GTAAGAATTTATCAATACAA+TGG | + | chr5_1:18105644-18105663 | Msa0721490:intron | 20.0% |
| !!! | TTTGTGGTAACTTAATTTTT+AGG | - | chr5_1:18107132-18107151 | Msa0721480:intron | 20.0% |
| !!! | AACTTAATTTTTAGGATTTG+AGG | - | chr5_1:18107140-18107159 | Msa0721480:intron | 20.0% |
| !!! | ACTTAATTTTTAGGATTTGA+GGG | - | chr5_1:18107141-18107160 | Msa0721480:intron | 20.0% |
| !!! | TCTAAGATGATAAAGAAAAA+GGG | - | chr5_1:18107196-18107215 | Msa0721480:intron | 20.0% |
| !! | TATGAGAGAAAAAATGAATA+AGG | - | chr5_1:18107264-18107283 | Msa0721480:intron | 20.0% |
| !! | AGAAAAAATGAATAAGGATT+TGG | - | chr5_1:18107270-18107289 | Msa0721480:intron | 20.0% |
| !! | TATCCAAGGTATATTTAATT+TGG | - | chr5_1:18107745-18107764 | Msa0721480:intron | 20.0% |
| !! | GTTATACTATAAATTAACCT+TGG | + | chr5_1:18107787-18107806 | None:intergenic | 20.0% |
| !!! | GTATAACAAATACAAACTTT+TGG | - | chr5_1:18107800-18107819 | Msa0721480:intron | 20.0% |
| ! | ATTTGCAACAACCAATAATA+AGG | + | chr5_1:18102546-18102565 | None:intergenic | 25.0% |
| !!! | GTTAGTTGTTTTTCATTCAT+TGG | - | chr5_1:18102754-18102773 | Msa0721480:CDS | 25.0% |
| !! | TCATTCATTGGATTAGAAAT+GGG | - | chr5_1:18102821-18102840 | Msa0721480:intron | 25.0% |
| !!! | TGTTTTAAAAATAAGGCTCA+AGG | + | chr5_1:18102899-18102918 | None:intergenic | 25.0% |
| ! | CCGTTTAATTCATTAATTTC+AGG | - | chr5_1:18102968-18102987 | Msa0721480:CDS | 25.0% |
| ! | ATATTGATGTTCAAATTTCC+AGG | + | chr5_1:18103051-18103070 | None:intergenic | 25.0% |
| !! | GTAATACAAATGTTTTCATG+TGG | - | chr5_1:18103119-18103138 | Msa0721480:intron | 25.0% |
| !!! | GAGATTCTGTTATTTTTATC+AGG | - | chr5_1:18103320-18103339 | Msa0721480:intron | 25.0% |
| !! | TAAAATCCTTGTTACACTTT+TGG | - | chr5_1:18103380-18103399 | Msa0721480:intron | 25.0% |
| ! | ATCATGCAATTGAAAAAACT+AGG | + | chr5_1:18103409-18103428 | None:intergenic | 25.0% |
| ! | AAAATTGTCATATCAGCAAA+AGG | + | chr5_1:18103445-18103464 | None:intergenic | 25.0% |
| ! | AATCTAAACAACAGTTTCAT+GGG | + | chr5_1:18103775-18103794 | None:intergenic | 25.0% |
| ! | AAATCTAAACAACAGTTTCA+TGG | + | chr5_1:18103776-18103795 | None:intergenic | 25.0% |
| ! | CAATTCACATAATTGACTAT+TGG | - | chr5_1:18103959-18103978 | Msa0721480:intron | 25.0% |
| !! | CTAATCTACCTATTGAATTT+TGG | + | chr5_1:18104702-18104721 | Msa0721490:CDS | 25.0% |
| ! | AATCATTTGAAAAACTTCAC+AGG | - | chr5_1:18105071-18105090 | Msa0721480:intron | 25.0% |
| !! | TAAGAAATTTTGTGTTGTAC+AGG | + | chr5_1:18105376-18105395 | Msa0721490:intron | 25.0% |
| !! | ATTAAGTTGTAATGCAAGTT+AGG | - | chr5_1:18105444-18105463 | Msa0721480:intron | 25.0% |
| ! | ATACAATGGATAATTGATAC+AGG | + | chr5_1:18105630-18105649 | Msa0721490:intron | 25.0% |
| ! | AGGTGAAAATTACAATGAAT+GGG | + | chr5_1:18106625-18106644 | Msa0721490:CDS | 25.0% |
| ! | AAGGTGAAAATTACAATGAA+TGG | + | chr5_1:18106626-18106645 | Msa0721490:CDS | 25.0% |
| !! | TGTAATTTTCACCTTTTAGT+TGG | - | chr5_1:18106631-18106650 | Msa0721480:intron | 25.0% |
| ! | AAAAGCAAGAAACTTTATGT+GGG | + | chr5_1:18107086-18107105 | None:intergenic | 25.0% |
| ! | AAAAAGCAAGAAACTTTATG+TGG | + | chr5_1:18107087-18107106 | None:intergenic | 25.0% |
| !!! | CTCTAAGATGATAAAGAAAA+AGG | - | chr5_1:18107195-18107214 | Msa0721480:intron | 25.0% |
| ! | CTAAGATGATAAAGAAAAAG+GGG | - | chr5_1:18107197-18107216 | Msa0721480:intron | 25.0% |
| !! | AGCTTATAGATCAATTTTAG+AGG | - | chr5_1:18107237-18107256 | Msa0721480:intron | 25.0% |
| !! | GCTTATAGATCAATTTTAGA+GGG | - | chr5_1:18107238-18107257 | Msa0721480:intron | 25.0% |
| !! | ATACGCTTAAAGAATGTTTT+AGG | + | chr5_1:18107301-18107320 | None:intergenic | 25.0% |
| ! | TATCATTTCAGAATCTGAAA+GGG | - | chr5_1:18107367-18107386 | Msa0721480:CDS | 25.0% |
| !! | TATATTTTGTAATGGCACAT+TGG | + | chr5_1:18107478-18107497 | None:intergenic | 25.0% |
| ! | TTTCAAAAGTCTTAACCTAA+TGG | + | chr5_1:18107546-18107565 | None:intergenic | 25.0% |
| ! | TATGAAATGTCAATTGTTAC+AGG | - | chr5_1:18107584-18107603 | Msa0721480:intron | 25.0% |
| ! | ATGAAATGTCAATTGTTACA+GGG | - | chr5_1:18107585-18107604 | Msa0721480:intron | 25.0% |
| ! | AGACCAAATTAAATATACCT+TGG | + | chr5_1:18107751-18107770 | None:intergenic | 25.0% |
| ! | ACTATAAATTAACCTTGGTT+AGG | + | chr5_1:18107782-18107801 | None:intergenic | 25.0% |
| !! | CAAATACAAACTTTTGGATT+AGG | - | chr5_1:18107806-18107825 | Msa0721480:intron | 25.0% |
| !!! | GCATTGTTATATTTTGAAAC+TGG | + | chr5_1:18107901-18107920 | None:intergenic | 25.0% |
| CCAAACAATAGAAAAACAGA+AGG | + | chr5_1:18102613-18102632 | None:intergenic | 30.0% | |
| !! | CCTTCTGTTTTTCTATTGTT+TGG | - | chr5_1:18102610-18102629 | Msa0721480:intron | 30.0% |
| TTTGCTTAAAACCCAACAAA+AGG | - | chr5_1:18102633-18102652 | Msa0721480:intron | 30.0% | |
| TTGCTTAAAACCCAACAAAA+GGG | - | chr5_1:18102634-18102653 | Msa0721480:intron | 30.0% | |
| ! | TAATTGTTGGTGAGATAACA+TGG | - | chr5_1:18102701-18102720 | Msa0721480:CDS | 30.0% |
| GATTAGATGATGATAGTTGT+TGG | - | chr5_1:18102776-18102795 | Msa0721480:intron | 30.0% | |
| GTTAGTTGTTTGTCATTCAT+TGG | - | chr5_1:18102809-18102828 | Msa0721480:intron | 30.0% | |
| ! | GTCATTCATTGGATTAGAAA+TGG | - | chr5_1:18102820-18102839 | Msa0721480:intron | 30.0% |
| ! | CATTCATTGGATTAGAAATG+GGG | - | chr5_1:18102822-18102841 | Msa0721480:intron | 30.0% |
| ! | ATTCATTGGATTAGAAATGG+GGG | - | chr5_1:18102823-18102842 | Msa0721480:intron | 30.0% |
| TCGATTAAGTTAAAATTGGG+AGG | - | chr5_1:18102855-18102874 | Msa0721480:intron | 30.0% | |
| ATCTTTGAATGTCAAACTCT+GGG | + | chr5_1:18103015-18103034 | None:intergenic | 30.0% | |
| AATCTTTGAATGTCAAACTC+TGG | + | chr5_1:18103016-18103035 | None:intergenic | 30.0% | |
| TTGTATTACTTTACACCAGA+AGG | + | chr5_1:18103108-18103127 | None:intergenic | 30.0% | |
| ! | ATACAAATGTTTTCATGTGG+CGG | - | chr5_1:18103122-18103141 | Msa0721480:intron | 30.0% |
| AATGACTTTGTTAGCACTAA+AGG | - | chr5_1:18103286-18103305 | Msa0721480:intron | 30.0% | |
| CAATTTGACCAAATCAATTG+AGG | + | chr5_1:18103479-18103498 | None:intergenic | 30.0% | |
| !! | CTCAATTGATTTGGTCAAAT+TGG | - | chr5_1:18103477-18103496 | Msa0721480:intron | 30.0% |
| ACATGATTGAATTATCCTGA+TGG | - | chr5_1:18103547-18103566 | Msa0721480:intron | 30.0% | |
| !!! | TAACTTTTGAGATCGAACAT+TGG | + | chr5_1:18103717-18103736 | None:intergenic | 30.0% |
| TCTAATGAATGTTTGGGAAA+AGG | + | chr5_1:18104100-18104119 | Msa0721490:CDS | 30.0% | |
| TGAAACAAGTGTTATGATAG+AGG | + | chr5_1:18104344-18104363 | Msa0721490:CDS | 30.0% | |
| ! | TTTTTGTGGGATATCCATAT+GGG | + | chr5_1:18104497-18104516 | Msa0721490:intron | 30.0% |
| ! | ATTTTTGTGGGATATCCATA+TGG | + | chr5_1:18104498-18104517 | Msa0721490:intron | 30.0% |
| TGACCATGCAAAATTTCATA+AGG | - | chr5_1:18104607-18104626 | Msa0721480:intron | 30.0% | |
| !!! | AGAGAATGTATTTTAACTGC+AGG | + | chr5_1:18104679-18104698 | Msa0721490:CDS | 30.0% |
| CATTCTCTCCAAAATTCAAT+AGG | - | chr5_1:18104691-18104710 | Msa0721480:intron | 30.0% | |
| TGTTCATGAAACATCTTGTT+CGG | + | chr5_1:18104803-18104822 | Msa0721490:CDS | 30.0% | |
| AATACCAAGTTCTTGGAAAT+AGG | - | chr5_1:18104822-18104841 | Msa0721480:intron | 30.0% | |
| AAAATTGTGTGTAGTGACAA+CGG | + | chr5_1:18104871-18104890 | Msa0721490:CDS | 30.0% | |
| ACGAAATTTCATAACTATGG+TGG | + | chr5_1:18104917-18104936 | Msa0721490:CDS | 30.0% | |
| ! | TAGAGTTATTTCCTTCTTAG+TGG | - | chr5_1:18104942-18104961 | Msa0721480:intron | 30.0% |
| TTATCTCTTAACCACTAAGA+AGG | + | chr5_1:18104956-18104975 | Msa0721490:intron | 30.0% | |
| AATGATTCACTGTGACTTAT+GGG | + | chr5_1:18105058-18105077 | Msa0721490:intron | 30.0% | |
| AAATGATTCACTGTGACTTA+TGG | + | chr5_1:18105059-18105078 | Msa0721490:intron | 30.0% | |
| AGTAAACTGAACAACAAGAT+TGG | - | chr5_1:18105395-18105414 | Msa0721480:intron | 30.0% | |
| TGACATCTTGTAATTTAGAC+AGG | - | chr5_1:18105571-18105590 | Msa0721480:intron | 30.0% | |
| CTTGTGAACAATGTTAAGAT+GGG | + | chr5_1:18105687-18105706 | Msa0721490:intron | 30.0% | |
| AACAATGCTGAAAATGTCAA+TGG | + | chr5_1:18105744-18105763 | Msa0721490:intron | 30.0% | |
| AGGTACAATTAAAGCTAATG+TGG | + | chr5_1:18105784-18105803 | Msa0721490:intron | 30.0% | |
| TGGTAAACTGAAGAAGATAT+GGG | + | chr5_1:18106295-18106314 | Msa0721490:CDS | 30.0% | |
| TTGGTAAACTGAAGAAGATA+TGG | + | chr5_1:18106296-18106315 | Msa0721490:CDS | 30.0% | |
| CTTCTTCAGTTTACCAAAAT+AGG | - | chr5_1:18106299-18106318 | Msa0721480:intron | 30.0% | |
| ! | TCTACTATTGTGACCTATTT+TGG | + | chr5_1:18106315-18106334 | Msa0721490:CDS | 30.0% |
| !! | AAGAAATTTGGCTTTGTAGA+CGG | + | chr5_1:18106570-18106589 | Msa0721490:CDS | 30.0% |
| TACAAAGCCAAATTTCTTTC+TGG | - | chr5_1:18106572-18106591 | Msa0721480:intron | 30.0% | |
| ! | ATATAGTTGTCTCGTTTTCA+TGG | + | chr5_1:18106811-18106830 | None:intergenic | 30.0% |
| ! | CTTTGTATTGATACACATAC+TGG | - | chr5_1:18106882-18106901 | Msa0721480:intron | 30.0% |
| !!! | AAGTTTCTTGCTTTTTCAAC+TGG | - | chr5_1:18107091-18107110 | Msa0721480:intron | 30.0% |
| !!! | AGTTTCTTGCTTTTTCAACT+GGG | - | chr5_1:18107092-18107111 | Msa0721480:intron | 30.0% |
| !!! | TTTTTAGGATTTGAGGGAAT+AGG | - | chr5_1:18107147-18107166 | Msa0721480:intron | 30.0% |
| !!! | TTTTAGGATTTGAGGGAATA+GGG | - | chr5_1:18107148-18107167 | Msa0721480:intron | 30.0% |
| ! | GGGTACAATTAATCAGTTTT+GGG | - | chr5_1:18107169-18107188 | Msa0721480:intron | 30.0% |
| GTATCATTTCAGAATCTGAA+AGG | - | chr5_1:18107366-18107385 | Msa0721480:CDS | 30.0% | |
| ATCATTTCAGAATCTGAAAG+GGG | - | chr5_1:18107368-18107387 | Msa0721480:CDS | 30.0% | |
| AGTTGAGAAATCATTCCATT+AGG | - | chr5_1:18107528-18107547 | Msa0721480:intron | 30.0% | |
| AGAAATCACAATTGCTAGTT+GGG | - | chr5_1:18107611-18107630 | Msa0721480:intron | 30.0% | |
| TGGGCATATTATTAGCATTA+AGG | + | chr5_1:18107681-18107700 | None:intergenic | 30.0% | |
| CTTCGACATCAAATTCTAAA+AGG | - | chr5_1:18107929-18107948 | Msa0721480:intron | 30.0% | |
| AGTGTTACAACTGCTAGAAT+TGG | - | chr5_1:18102445-18102464 | Msa0721480:CDS | 35.0% | |
| CTTGTTGACGATGAGAATAA+TGG | - | chr5_1:18102507-18102526 | Msa0721480:CDS | 35.0% | |
| GTAACAAACAAGCAGACAAA+AGG | + | chr5_1:18102591-18102610 | None:intergenic | 35.0% | |
| TTAAAACCCAACAAAAGGGT+GGG | - | chr5_1:18102638-18102657 | Msa0721480:intron | 35.0% | |
| ACACGATTGTCACTAATTGT+TGG | - | chr5_1:18102688-18102707 | Msa0721480:CDS | 35.0% | |
| AAGATTTGCATCACAATACC+TGG | - | chr5_1:18103030-18103049 | Msa0721480:intron | 35.0% | |
| TGAACATCAATATAGTGGTG+AGG | - | chr5_1:18103058-18103077 | Msa0721480:intron | 35.0% | |
| CAGATCAATTCTATTCCTTC+TGG | - | chr5_1:18103090-18103109 | Msa0721480:intron | 35.0% | |
| ! | TACAAATGTTTTCATGTGGC+GGG | - | chr5_1:18103123-18103142 | Msa0721480:intron | 35.0% |
| TGATGTGTCCTCAATTGATT+TGG | - | chr5_1:18103468-18103487 | Msa0721480:intron | 35.0% | |
| GGAATGCATTTCTCAAAAAC+CGG | - | chr5_1:18103578-18103597 | Msa0721480:intron | 35.0% | |
| GAATGCATTTCTCAAAAACC+GGG | - | chr5_1:18103579-18103598 | Msa0721480:intron | 35.0% | |
| AATGCATTTCTCAAAAACCG+GGG | - | chr5_1:18103580-18103599 | Msa0721480:intron | 35.0% | |
| GAAAATATGTCACCCATCTT+TGG | - | chr5_1:18103749-18103768 | Msa0721480:intron | 35.0% | |
| AAAGACTAAAGCGACTCAAT+TGG | - | chr5_1:18103810-18103829 | Msa0721480:intron | 35.0% | |
| AAGACTAAAGCGACTCAATT+GGG | - | chr5_1:18103811-18103830 | Msa0721480:intron | 35.0% | |
| AAGGATGGATAAACTTTGAG+AGG | - | chr5_1:18104006-18104025 | Msa0721480:intron | 35.0% | |
| ! | AGGATGGATAAACTTTGAGA+GGG | - | chr5_1:18104007-18104026 | Msa0721480:intron | 35.0% |
| TGCTGAAACAGAAAGAATAG+AGG | + | chr5_1:18104188-18104207 | Msa0721490:CDS | 35.0% | |
| TATTCTTTCTGTTTCAGCAG+AGG | - | chr5_1:18104189-18104208 | Msa0721480:intron | 35.0% | |
| ACTCATTTGATCAGACTCAT+CGG | - | chr5_1:18104228-18104247 | Msa0721480:intron | 35.0% | |
| ! | ATAACACTTGTTTCAAGTGC+AGG | - | chr5_1:18104349-18104368 | Msa0721480:intron | 35.0% |
| GAAGTGTATGACATAGAGTT+AGG | + | chr5_1:18104463-18104482 | Msa0721490:CDS | 35.0% | |
| !! | AGCAGGAAGTGTATTTTTGT+GGG | + | chr5_1:18104510-18104529 | Msa0721490:intron | 35.0% |
| CTTGAACACATATGAGTGTT+TGG | + | chr5_1:18104587-18104606 | Msa0721490:CDS | 35.0% | |
| ! | ACGCCTTATGAAATTTTGCA+TGG | + | chr5_1:18104613-18104632 | Msa0721490:CDS | 35.0% |
| TTTCCATGCAAAACAAGTGA+CGG | - | chr5_1:18104634-18104653 | Msa0721480:intron | 35.0% | |
| GTTCATGAAACATCTTGTTC+GGG | + | chr5_1:18104802-18104821 | Msa0721490:CDS | 35.0% | |
| CATGAACAATACCAAGTTCT+TGG | - | chr5_1:18104815-18104834 | Msa0721480:intron | 35.0% | |
| GGAGCTCAAACATTTGAATT+CGG | - | chr5_1:18104843-18104862 | Msa0721480:intron | 35.0% | |
| ATGATTCACTGTGACTTATG+GGG | + | chr5_1:18105057-18105076 | Msa0721490:intron | 35.0% | |
| TTACATAGGCTACTACTTGA+AGG | - | chr5_1:18105099-18105118 | Msa0721480:intron | 35.0% | |
| !! | TTCCAAACATTGATTCTGGT+AGG | + | chr5_1:18105191-18105210 | Msa0721490:intron | 35.0% |
| !! | CTTGTTCCAAACATTGATTC+TGG | + | chr5_1:18105195-18105214 | Msa0721490:intron | 35.0% |
| !!! | GATCAAGGTCTTTTGATTTG+TGG | + | chr5_1:18105257-18105276 | Msa0721490:intron | 35.0% |
| CTCTACTACTTTCAAACTGT+GGG | + | chr5_1:18105306-18105325 | Msa0721490:intron | 35.0% | |
| GTTAGGCATATAAAGCACAT+TGG | - | chr5_1:18105461-18105480 | Msa0721480:intron | 35.0% | |
| GAAACACATGATTGCTACAA+AGG | + | chr5_1:18105523-18105542 | Msa0721490:intron | 35.0% | |
| CCTTGTGAACAATGTTAAGA+TGG | + | chr5_1:18105688-18105707 | Msa0721490:intron | 35.0% | |
| CCATCTTAACATTGTTCACA+AGG | - | chr5_1:18105685-18105704 | Msa0721480:intron | 35.0% | |
| AATTAAAGCTAATGTGGTGC+AGG | + | chr5_1:18105778-18105797 | Msa0721490:intron | 35.0% | |
| AATTGATAGGCTATCTCGAA+TGG | + | chr5_1:18105887-18105906 | Msa0721490:intron | 35.0% | |
| ATTCGAGATAGCCTATCAAT+TGG | - | chr5_1:18105886-18105905 | Msa0721480:intron | 35.0% | |
| ! | CTCTTCTTTTCCACAAGTTA+TGG | - | chr5_1:18106034-18106053 | Msa0721480:intron | 35.0% |
| GAGTAAACTCTGTTAAGTGT+TGG | - | chr5_1:18106086-18106105 | Msa0721480:intron | 35.0% | |
| !! | AACTCTGTTAAGTGTTGGTA+AGG | - | chr5_1:18106091-18106110 | Msa0721480:intron | 35.0% |
| !! | ACTCTGTTAAGTGTTGGTAA+GGG | - | chr5_1:18106092-18106111 | Msa0721480:intron | 35.0% |
| ATTTGATCTCACTGTACCAT+AGG | - | chr5_1:18106130-18106149 | Msa0721480:intron | 35.0% | |
| ! | AAAGAAGCGTGAAGAAGAAA+GGG | + | chr5_1:18106196-18106215 | Msa0721490:CDS | 35.0% |
| ! | AAAAGAAGCGTGAAGAAGAA+AGG | + | chr5_1:18106197-18106216 | Msa0721490:CDS | 35.0% |
| GTCTGTGCACTTGTAATATA+GGG | + | chr5_1:18106230-18106249 | Msa0721490:CDS | 35.0% | |
| TAAACTGAAGAAGATATGGG+AGG | + | chr5_1:18106292-18106311 | Msa0721490:CDS | 35.0% | |
| ACAACTCATTGTTGGTATCA+TGG | + | chr5_1:18106494-18106513 | Msa0721490:CDS | 35.0% | |
| TTGAGAGCCAGAAAGAAATT+TGG | + | chr5_1:18106582-18106601 | Msa0721490:CDS | 35.0% | |
| GTGACAAAAGTCCAACTAAA+AGG | + | chr5_1:18106645-18106664 | None:intergenic | 35.0% | |
| AAATGATAATCCAGGAAGTG+TGG | + | chr5_1:18106667-18106686 | None:intergenic | 35.0% | |
| ACACTTCCTGGATTATCATT+TGG | - | chr5_1:18106666-18106685 | Msa0721480:intron | 35.0% | |
| CACTTCCTGGATTATCATTT+GGG | - | chr5_1:18106667-18106686 | Msa0721480:intron | 35.0% | |
| ACTTCCTGGATTATCATTTG+GGG | - | chr5_1:18106668-18106687 | Msa0721480:intron | 35.0% | |
| ATAACCCCAAATGATAATCC+AGG | + | chr5_1:18106675-18106694 | None:intergenic | 35.0% | |
| ! | AGACAACTATATTTGAGACC+AGG | - | chr5_1:18106819-18106838 | Msa0721480:intron | 35.0% |
| TCTCCAATTGAGTCTCTTTA+TGG | + | chr5_1:18106852-18106871 | None:intergenic | 35.0% | |
| TGATTTCAGCTAGTGATTCT+AGG | + | chr5_1:18106938-18106957 | None:intergenic | 35.0% | |
| TAGTAAGAGAGAATGGTTTG+TGG | - | chr5_1:18107116-18107135 | Msa0721480:intron | 35.0% | |
| ! | TTTAGGATTTGAGGGAATAG+GGG | - | chr5_1:18107149-18107168 | Msa0721480:intron | 35.0% |
| ! | GGGGTACAATTAATCAGTTT+TGG | - | chr5_1:18107168-18107187 | Msa0721480:intron | 35.0% |
| GTATGTTTCACGAAAATGCA+AGG | - | chr5_1:18107317-18107336 | Msa0721480:CDS | 35.0% | |
| GAGAAATCACAATTGCTAGT+TGG | - | chr5_1:18107610-18107629 | Msa0721480:intron | 35.0% | |
| GAAATCACAATTGCTAGTTG+GGG | - | chr5_1:18107612-18107631 | Msa0721480:intron | 35.0% | |
| TTAGCATTAAGGACTGATGA+TGG | + | chr5_1:18107670-18107689 | None:intergenic | 35.0% | |
| TTCCTGTTGTATACTATCCA+AGG | - | chr5_1:18107731-18107750 | Msa0721480:intron | 35.0% | |
| TACCTTGGATAGTATACAAC+AGG | + | chr5_1:18107736-18107755 | None:intergenic | 35.0% | |
| AAATTAACCTTGGTTAGGCA+AGG | + | chr5_1:18107777-18107796 | None:intergenic | 35.0% | |
| !!! | TTTTGAGAGTACTACCATCT+TGG | + | chr5_1:18108132-18108151 | None:intergenic | 35.0% |
| AGATGGTAGTACTCTCAAAA+TGG | - | chr5_1:18108132-18108151 | Msa0721480:CDS | 35.0% | |
| TAGCTGGATCCAAAATTGGA+AGG | + | chr5_1:18102483-18102502 | None:intergenic | 40.0% | |
| AGAGTAGCTGGATCCAAAAT+TGG | + | chr5_1:18102487-18102506 | None:intergenic | 40.0% | |
| CTTAAAACCCAACAAAAGGG+TGG | - | chr5_1:18102637-18102656 | Msa0721480:intron | 40.0% | |
| ! | TGTTGGTGAGATAACATGGT+TGG | - | chr5_1:18102705-18102724 | Msa0721480:CDS | 40.0% |
| GATAGTTGTTGGACACTACA+AGG | - | chr5_1:18102787-18102806 | Msa0721480:intron | 40.0% | |
| !!! | TTTTTTATGCAGGTAGCCCA+AGG | - | chr5_1:18103239-18103258 | Msa0721480:intron | 40.0% |
| ! | AGGTGACCAAAAGTGTAACA+AGG | + | chr5_1:18103389-18103408 | None:intergenic | 40.0% |
| ! | AATTATCCTGATGGTGCTAG+TGG | - | chr5_1:18103556-18103575 | Msa0721480:intron | 40.0% |
| ! | ATTATCCTGATGGTGCTAGT+GGG | - | chr5_1:18103557-18103576 | Msa0721480:intron | 40.0% |
| TAGTTTCAAGCGACGAGTTA+AGG | + | chr5_1:18103647-18103666 | None:intergenic | 40.0% | |
| ACAGAGAGAAGTGAGAAACA+TGG | + | chr5_1:18103677-18103696 | None:intergenic | 40.0% | |
| AAAATATGAAAGGTGGCGTC+AGG | + | chr5_1:18103858-18103877 | Msa0721490:CDS | 40.0% | |
| AAGCGGCAAAATATGAAAGG+TGG | + | chr5_1:18103865-18103884 | Msa0721490:CDS | 40.0% | |
| CTCAAGCGGCAAAATATGAA+AGG | + | chr5_1:18103868-18103887 | Msa0721490:CDS | 40.0% | |
| TATTGGATATTGCGTACCTC+AGG | - | chr5_1:18103976-18103995 | Msa0721480:intron | 40.0% | |
| ! | GGATGGATAAACTTTGAGAG+GGG | - | chr5_1:18104008-18104027 | Msa0721480:intron | 40.0% |
| TATTCGTCTGCAAGGATATG+TGG | + | chr5_1:18104056-18104075 | Msa0721490:CDS | 40.0% | |
| TATCCTTGCAGACGAATAGA+TGG | - | chr5_1:18104058-18104077 | Msa0721480:intron | 40.0% | |
| ATCCTTGCAGACGAATAGAT+GGG | - | chr5_1:18104059-18104078 | Msa0721480:intron | 40.0% | |
| TAGATGGGAATTTCTTCCGT+TGG | - | chr5_1:18104074-18104093 | Msa0721480:intron | 40.0% | |
| AATGTTTGGGAAAAGGCCAA+CGG | + | chr5_1:18104093-18104112 | Msa0721490:CDS | 40.0% | |
| AGATGTAGCGAATGTAAGTG+GGG | + | chr5_1:18104140-18104159 | Msa0721490:CDS | 40.0% | |
| CAGATGTAGCGAATGTAAGT+GGG | + | chr5_1:18104141-18104160 | Msa0721490:CDS | 40.0% | |
| ! | TCTTACTGATGATGTTTCCG+TGG | + | chr5_1:18104272-18104291 | Msa0721490:CDS | 40.0% |
| ACGGAAACATCATCAGTAAG+AGG | - | chr5_1:18104271-18104290 | Msa0721480:intron | 40.0% | |
| ! | ACATCATCAGTAAGAGGTAC+AGG | - | chr5_1:18104277-18104296 | Msa0721480:intron | 40.0% |
| ATGATAGAGGACGACATCAA+TGG | + | chr5_1:18104331-18104350 | Msa0721490:CDS | 40.0% | |
| TTCCATCCTTTCTTCCCATA+TGG | - | chr5_1:18104480-18104499 | Msa0721480:intron | 40.0% | |
| ATCCATATGGGAAGAAAGGA+TGG | + | chr5_1:18104485-18104504 | Msa0721490:CDS | 40.0% | |
| GGATATCCATATGGGAAGAA+AGG | + | chr5_1:18104489-18104508 | Msa0721490:intron | 40.0% | |
| !! | CAGCAGGAAGTGTATTTTTG+TGG | + | chr5_1:18104511-18104530 | Msa0721490:intron | 40.0% |
| AGTAGCAAATTTGTCCCCTT+TGG | - | chr5_1:18104533-18104552 | Msa0721480:intron | 40.0% | |
| TACACAATCGGAATCCAAAG+GGG | + | chr5_1:18104550-18104569 | Msa0721490:intron | 40.0% | |
| GTACACAATCGGAATCCAAA+GGG | + | chr5_1:18104551-18104570 | Msa0721490:intron | 40.0% | |
| TCCGATTGTGTACGTAACAA+AGG | - | chr5_1:18104558-18104577 | Msa0721480:intron | 40.0% | |
| GCCTTTGTTACGTACACAAT+CGG | + | chr5_1:18104562-18104581 | Msa0721490:intron | 40.0% | |
| !!! | ATTCCGTCACTTGTTTTGCA+TGG | + | chr5_1:18104640-18104659 | Msa0721490:CDS | 40.0% |
| AGCTCCTATTTCCAAGAACT+TGG | + | chr5_1:18104829-18104848 | Msa0721490:CDS | 40.0% | |
| TATTGAATCCCGTCTCATTG+TGG | + | chr5_1:18105030-18105049 | Msa0721490:intron | 40.0% | |
| CAATGAGACGGGATTCAATA+AGG | - | chr5_1:18105030-18105049 | Msa0721480:intron | 40.0% | |
| CTTCACAGGTTCGATTACAT+AGG | - | chr5_1:18105085-18105104 | Msa0721480:intron | 40.0% | |
| !! | TGCTCTAAGACAAACATCAC+AGG | - | chr5_1:18105143-18105162 | Msa0721480:intron | 40.0% |
| CATCACAGGTTCGATTACAT+AGG | - | chr5_1:18105157-18105176 | Msa0721480:intron | 40.0% | |
| CTCCTACCAGAATCAATGTT+TGG | - | chr5_1:18105186-18105205 | Msa0721480:intron | 40.0% | |
| !!! | CTTTTGATTTGTGGCACAAG+AGG | + | chr5_1:18105248-18105267 | Msa0721490:intron | 40.0% |
| TACTACTTTCAAACTGTGGG+TGG | + | chr5_1:18105303-18105322 | Msa0721490:intron | 40.0% | |
| GCTCTACTACTTTCAAACTG+TGG | + | chr5_1:18105307-18105326 | Msa0721490:intron | 40.0% | |
| GATTGCTACAAAGGAAGGAA+CGG | + | chr5_1:18105514-18105533 | Msa0721490:intron | 40.0% | |
| CACATGATTGCTACAAAGGA+AGG | + | chr5_1:18105519-18105538 | Msa0721490:intron | 40.0% | |
| TTAGTTGTCCAGTCATGTGA+TGG | - | chr5_1:18105598-18105617 | Msa0721480:intron | 40.0% | |
| TAGTTGTCCAGTCATGTGAT+GGG | - | chr5_1:18105599-18105618 | Msa0721480:intron | 40.0% | |
| GATAGCTGCTTCCAATTGAT+AGG | + | chr5_1:18105900-18105919 | Msa0721490:intron | 40.0% | |
| ATCAATTGGAAGCAGCTATC+TGG | - | chr5_1:18105900-18105919 | Msa0721480:intron | 40.0% | |
| TCAATTGGAAGCAGCTATCT+GGG | - | chr5_1:18105901-18105920 | Msa0721480:intron | 40.0% | |
| !! | TTCAGGTTGGAAATAGGACT+CGG | + | chr5_1:18105989-18106008 | Msa0721490:intron | 40.0% |
| !! | TTGCTGTTCAGGTTGGAAAT+AGG | + | chr5_1:18105995-18106014 | Msa0721490:intron | 40.0% |
| !!! | ATGAGTTTTGCTGTTCAGGT+TGG | + | chr5_1:18106002-18106021 | Msa0721490:intron | 40.0% |
| !!! | GGTAATGAGTTTTGCTGTTC+AGG | + | chr5_1:18106006-18106025 | Msa0721490:intron | 40.0% |
| ACTTGTGGAAAAGAAGAGAC+TGG | + | chr5_1:18106032-18106051 | Msa0721490:intron | 40.0% | |
| TTGTAATATAGGGTCTGTGC+TGG | + | chr5_1:18106220-18106239 | Msa0721490:CDS | 40.0% | |
| GGTCTGTGCACTTGTAATAT+AGG | + | chr5_1:18106231-18106250 | Msa0721490:CDS | 40.0% | |
| TGACATCAAAGAGAGGTTCT+CGG | + | chr5_1:18106400-18106419 | Msa0721490:CDS | 40.0% | |
| ! | TGTGGATTGACATCAAAGAG+AGG | + | chr5_1:18106407-18106426 | Msa0721490:CDS | 40.0% |
| GTGGATCAACAACTCATTGT+TGG | + | chr5_1:18106502-18106521 | Msa0721490:CDS | 40.0% | |
| ATCCACCAATCTTCAAGATC+CGG | - | chr5_1:18106516-18106535 | Msa0721480:intron | 40.0% | |
| CAATCCAGAAACCAGATGAA+GGG | + | chr5_1:18106545-18106564 | Msa0721490:CDS | 40.0% | |
| ACAATCCAGAAACCAGATGA+AGG | + | chr5_1:18106546-18106565 | Msa0721490:CDS | 40.0% | |
| ! | TCATTTGGGGTTATGTCGTA+TGG | - | chr5_1:18106681-18106700 | Msa0721480:intron | 40.0% |
| AAGAATAAGGAAACTGTCGG+TGG | + | chr5_1:18106732-18106751 | None:intergenic | 40.0% | |
| GGCAAGAATAAGGAAACTGT+CGG | + | chr5_1:18106735-18106754 | None:intergenic | 40.0% | |
| CAATGAAGACGGCAAGAATA+AGG | + | chr5_1:18106745-18106764 | None:intergenic | 40.0% | |
| ATTCTTGCCGTCTTCATTGA+CGG | - | chr5_1:18106746-18106765 | Msa0721480:intron | 40.0% | |
| AAGGAAACCGTCAATGAAGA+CGG | + | chr5_1:18106756-18106775 | None:intergenic | 40.0% | |
| GGCTGAAGAAATAGTCAAGA+AGG | + | chr5_1:18106790-18106809 | None:intergenic | 40.0% | |
| TCTCTTTATGGAGCTATTCC+TGG | + | chr5_1:18106840-18106859 | None:intergenic | 40.0% | |
| GCTCCATAAAGAGACTCAAT+TGG | - | chr5_1:18106846-18106865 | Msa0721480:intron | 40.0% | |
| !! | ACTGGGTTAGTAAGAGAGAA+TGG | - | chr5_1:18107109-18107128 | Msa0721480:intron | 40.0% |
| ! | AGTATTTTCTCCAAGGTGGT+TGG | - | chr5_1:18107344-18107363 | Msa0721480:CDS | 40.0% |
| TGAAATGATACCAACCACCT+TGG | + | chr5_1:18107357-18107376 | None:intergenic | 40.0% | |
| CTAAACTATTCCTCGTGTAC+AGG | + | chr5_1:18107403-18107422 | None:intergenic | 40.0% | |
| AGTTTAGTCATGCGATGTTC+AGG | - | chr5_1:18107416-18107435 | Msa0721480:intron | 40.0% | |
| TTAGCAGCAACAGCATCAAT+GGG | + | chr5_1:18107700-18107719 | None:intergenic | 40.0% | |
| ATTAGCAGCAACAGCATCAA+TGG | + | chr5_1:18107701-18107720 | None:intergenic | 40.0% | |
| TCTAAAAGGCCGTTACAATC+TGG | - | chr5_1:18107943-18107962 | Msa0721480:intron | 40.0% | |
| CCAGACAATCCAGATTGTAA+CGG | + | chr5_1:18107955-18107974 | None:intergenic | 40.0% | |
| !!! | AGCTCTGAGCCTTCCAATTT+TGG | - | chr5_1:18102471-18102490 | Msa0721480:CDS | 45.0% |
| ATCGTCAACAAGAGAGTAGC+TGG | + | chr5_1:18102499-18102518 | None:intergenic | 45.0% | |
| ! | CTTACTCCCACCCTTTTGTT+GGG | + | chr5_1:18102647-18102666 | None:intergenic | 45.0% |
| ! | TCTTACTCCCACCCTTTTGT+TGG | + | chr5_1:18102648-18102667 | None:intergenic | 45.0% |
| TACCAAGAACGTGTCTCCTT+GGG | + | chr5_1:18103258-18103277 | None:intergenic | 45.0% | |
| TTACCAAGAACGTGTCTCCT+TGG | + | chr5_1:18103259-18103278 | None:intergenic | 45.0% | |
| AGGAGACACGTTCTTGGTAA+AGG | - | chr5_1:18103259-18103278 | Msa0721480:intron | 45.0% | |
| TCAAAAACCGGGGTTTCACT+TGG | - | chr5_1:18103590-18103609 | Msa0721480:intron | 45.0% | |
| CAAAAACCGGGGTTTCACTT+GGG | - | chr5_1:18103591-18103610 | Msa0721480:intron | 45.0% | |
| AAAAACCGGGGTTTCACTTG+GGG | - | chr5_1:18103592-18103611 | Msa0721480:intron | 45.0% | |
| TTTAACCCCAAGTGAAACCC+CGG | + | chr5_1:18103600-18103619 | None:intergenic | 45.0% | |
| GCGACGAGTTAAGGAATTTG+AGG | + | chr5_1:18103638-18103657 | None:intergenic | 45.0% | |
| GAGAGAAGTGAGAAACATGG+TGG | + | chr5_1:18103674-18103693 | None:intergenic | 45.0% | |
| CAGTTTCATGGGCCAAAGAT+GGG | + | chr5_1:18103764-18103783 | None:intergenic | 45.0% | |
| ACAGTTTCATGGGCCAAAGA+TGG | + | chr5_1:18103765-18103784 | None:intergenic | 45.0% | |
| ACCTCAAACGTTTGCTCAAG+CGG | + | chr5_1:18103882-18103901 | Msa0721490:CDS | 45.0% | |
| TTCCCATCTATTCGTCTGCA+AGG | + | chr5_1:18104064-18104083 | Msa0721490:CDS | 45.0% | |
| GATGTAGCGAATGTAAGTGG+GGG | + | chr5_1:18104139-18104158 | Msa0721490:CDS | 45.0% | |
| CCAGATGTAGCGAATGTAAG+TGG | + | chr5_1:18104142-18104161 | Msa0721490:CDS | 45.0% | |
| CCACTTACATTCGCTACATC+TGG | - | chr5_1:18104139-18104158 | Msa0721480:intron | 45.0% | |
| AGGTACAGGCAGATGATCAA+TGG | - | chr5_1:18104291-18104310 | Msa0721480:intron | 45.0% | |
| GACGACATCAATGGTCAAAG+TGG | + | chr5_1:18104322-18104341 | Msa0721490:CDS | 45.0% | |
| ! | CCATATCAAGCCACTAGCTT+GGG | + | chr5_1:18104394-18104413 | Msa0721490:CDS | 45.0% |
| CCAAGCTAGTGGCTTGATAT+GGG | - | chr5_1:18104392-18104411 | Msa0721480:intron | 45.0% | |
| CCTCATTGAACACAACGTCT+CGG | - | chr5_1:18104422-18104441 | Msa0721480:intron | 45.0% | |
| CTCATTGAACACAACGTCTC+GGG | - | chr5_1:18104423-18104442 | Msa0721480:intron | 45.0% | |
| !! | ACAAATTTGCTACTCGCAGC+AGG | + | chr5_1:18104527-18104546 | Msa0721490:intron | 45.0% |
| CGTACACAATCGGAATCCAA+AGG | + | chr5_1:18104552-18104571 | Msa0721490:intron | 45.0% | |
| ! | GCAAAACAAGTGACGGAATG+CGG | - | chr5_1:18104641-18104660 | Msa0721480:intron | 45.0% |
| ATGACTGCTCAAGAGCAGTA+TGG | + | chr5_1:18104981-18105000 | Msa0721490:intron | 45.0% | |
| TATCGTGCACCACAATGAGA+CGG | - | chr5_1:18105018-18105037 | Msa0721480:intron | 45.0% | |
| AGCTCTACAACCTTAGACGA+CGG | - | chr5_1:18105213-18105232 | Msa0721480:intron | 45.0% | |
| ATTTGTGGCACAAGAGGTTG+GGG | + | chr5_1:18105242-18105261 | Msa0721490:intron | 45.0% | |
| GATTTGTGGCACAAGAGGTT+GGG | + | chr5_1:18105243-18105262 | Msa0721490:intron | 45.0% | |
| ! | TGATTTGTGGCACAAGAGGT+TGG | + | chr5_1:18105244-18105263 | Msa0721490:intron | 45.0% |
| GATTGGAGTGGGTGAACAAA+GGG | + | chr5_1:18105334-18105353 | Msa0721490:intron | 45.0% | |
| TGATTGGAGTGGGTGAACAA+AGG | + | chr5_1:18105335-18105354 | Msa0721490:intron | 45.0% | |
| GCAATCATGTGTTTCCCGTT+TGG | - | chr5_1:18105528-18105547 | Msa0721480:intron | 45.0% | |
| TCATGTGTTTCCCGTTTGGA+AGG | - | chr5_1:18105532-18105551 | Msa0721480:intron | 45.0% | |
| GGAGCTACTGAAAAACTCTC+TGG | + | chr5_1:18105666-18105685 | Msa0721490:intron | 45.0% | |
| TGGTCTCAATAGTGAGCAGT+GGG | + | chr5_1:18105724-18105743 | Msa0721490:intron | 45.0% | |
| ATGGTCTCAATAGTGAGCAG+TGG | + | chr5_1:18105725-18105744 | Msa0721490:intron | 45.0% | |
| ATAGGCTATCTCGAATGGTG+GGG | + | chr5_1:18105882-18105901 | Msa0721490:intron | 45.0% | |
| GATAGGCTATCTCGAATGGT+GGG | + | chr5_1:18105883-18105902 | Msa0721490:intron | 45.0% | |
| TGATAGGCTATCTCGAATGG+TGG | + | chr5_1:18105884-18105903 | Msa0721490:intron | 45.0% | |
| TATCTGGGTCATGTCCTGAA+CGG | - | chr5_1:18105916-18105935 | Msa0721480:intron | 45.0% | |
| GGACTCGGGGAAAAATCAAA+GGG | + | chr5_1:18105974-18105993 | Msa0721490:intron | 45.0% | |
| AGGACTCGGGGAAAAATCAA+AGG | + | chr5_1:18105975-18105994 | Msa0721490:intron | 45.0% | |
| !! | TCAGGTTGGAAATAGGACTC+GGG | + | chr5_1:18105988-18106007 | Msa0721490:intron | 45.0% |
| TGGAAAAGAAGAGACTGGAG+AGG | + | chr5_1:18106027-18106046 | Msa0721490:intron | 45.0% | |
| CTCACTGTACCATAGGTGAT+AGG | - | chr5_1:18106137-18106156 | Msa0721480:intron | 45.0% | |
| ACTGTACCATAGGTGATAGG+TGG | - | chr5_1:18106140-18106159 | Msa0721480:intron | 45.0% | |
| AGGGTGCATCAGTTCCTTAT+AGG | + | chr5_1:18106177-18106196 | Msa0721490:CDS | 45.0% | |
| CAGATACCATCTTGCAAGTG+CGG | + | chr5_1:18106252-18106271 | Msa0721490:CDS | 45.0% | |
| CAAGTTCTGCCATCAATTGC+TGG | - | chr5_1:18106355-18106374 | Msa0721480:intron | 45.0% | |
| ! | ACTTTTGTCACCACACTTCC+TGG | - | chr5_1:18106654-18106673 | Msa0721480:intron | 45.0% |
| GGTTATGTCGTATGGAGAGA+TGG | - | chr5_1:18106689-18106708 | Msa0721480:intron | 45.0% | |
| ATAAGGAAACTGTCGGTGGA+AGG | + | chr5_1:18106728-18106747 | None:intergenic | 45.0% | |
| CAAGAAGGCAGACATCAACA+AGG | + | chr5_1:18106775-18106794 | None:intergenic | 45.0% | |
| GTTTCACGAAAATGCAAGGC+AGG | - | chr5_1:18107321-18107340 | Msa0721480:CDS | 45.0% | |
| !!! | AGGCAGGAGTATTTTCTCCA+AGG | - | chr5_1:18107337-18107356 | Msa0721480:CDS | 45.0% |
| !!! | CAGGAGTATTTTCTCCAAGG+TGG | - | chr5_1:18107340-18107359 | Msa0721480:CDS | 45.0% |
| TAATGGCACATTGGTCACAG+TGG | + | chr5_1:18107469-18107488 | None:intergenic | 45.0% | |
| CCGTTACAATCTGGATTGTC+TGG | - | chr5_1:18107952-18107971 | Msa0721480:intron | 45.0% | |
| TTGCTTAACGACCTTGTCGA+TGG | - | chr5_1:18108166-18108185 | Msa0721480:CDS | 45.0% | |
| CTTCCAATGAACCATCGACA+AGG | + | chr5_1:18108180-18108199 | None:intergenic | 45.0% | |
| CTTGTCGATGGTTCATTGGA+AGG | - | chr5_1:18108178-18108197 | Msa0721480:CDS | 45.0% | |
| AATGTCAAACTCTGGGCTGC+TGG | + | chr5_1:18103008-18103027 | None:intergenic | 50.0% | |
| GACACGTTCTTGGTAAAGGC+TGG | - | chr5_1:18103263-18103282 | Msa0721480:intron | 50.0% | |
| AGCACTAAAGGACTCGAAGC+AGG | - | chr5_1:18103298-18103317 | Msa0721480:intron | 50.0% | |
| ACCTCAGGCATGAGAAAGGA+TGG | - | chr5_1:18103991-18104010 | Msa0721480:intron | 50.0% | |
| TCCATCCTTTCTCATGCCTG+AGG | + | chr5_1:18103995-18104014 | Msa0721490:CDS | 50.0% | |
| TCCGTGGTAGCTAGAGATGT+GGG | + | chr5_1:18104256-18104275 | Msa0721490:CDS | 50.0% | |
| TTCCGTGGTAGCTAGAGATG+TGG | + | chr5_1:18104257-18104276 | Msa0721490:CDS | 50.0% | |
| AATCTGCTCTCCCAAGCTAG+TGG | - | chr5_1:18104381-18104400 | Msa0721480:intron | 50.0% | |
| CCCAAGCTAGTGGCTTGATA+TGG | - | chr5_1:18104391-18104410 | Msa0721480:intron | 50.0% | |
| CCCATATCAAGCCACTAGCT+TGG | + | chr5_1:18104395-18104414 | Msa0721490:CDS | 50.0% | |
| CCGAGACGTTGTGTTCAATG+AGG | + | chr5_1:18104425-18104444 | Msa0721490:CDS | 50.0% | |
| ATCGTGCACCACAATGAGAC+GGG | - | chr5_1:18105019-18105038 | Msa0721480:intron | 50.0% | |
| TGTTGCAAGCTGGAGGATCA+AGG | + | chr5_1:18105272-18105291 | Msa0721490:intron | 50.0% | |
| GAGTGGGTGAACAAAGGGAA+GGG | + | chr5_1:18105329-18105348 | Msa0721490:intron | 50.0% | |
| ! | TCGAGGATGCTGATTGGAGT+GGG | + | chr5_1:18105345-18105364 | Msa0721490:intron | 50.0% |
| TCCAATCAGCATCCTCGACA+TGG | - | chr5_1:18105347-18105366 | Msa0721480:intron | 50.0% | |
| CCAATCAGCATCCTCGACAT+GGG | - | chr5_1:18105348-18105367 | Msa0721480:intron | 50.0% | |
| CAATCAGCATCCTCGACATG+GGG | - | chr5_1:18105349-18105368 | Msa0721480:intron | 50.0% | |
| TGCTACAAAGGAAGGAACGG+TGG | + | chr5_1:18105511-18105530 | Msa0721490:intron | 50.0% | |
| TGTCCTGTGAGCCTTCCAAA+CGG | + | chr5_1:18105546-18105565 | Msa0721490:intron | 50.0% | |
| TTTGGAAGGCTCACAGGACA+AGG | - | chr5_1:18105546-18105565 | Msa0721480:intron | 50.0% | |
| ! | TTGTCCAGTCATGTGATGGG+TGG | - | chr5_1:18105602-18105621 | Msa0721480:intron | 50.0% |
| AAAGGATGGACAACCTCAGG+AGG | + | chr5_1:18105819-18105838 | Msa0721490:intron | 50.0% | |
| TGCATTCACTGCAACCGTTC+AGG | + | chr5_1:18105933-18105952 | Msa0721490:intron | 50.0% | |
| GTTGCAGTGAATGCACACCA+TGG | - | chr5_1:18105938-18105957 | Msa0721480:intron | 50.0% | |
| CAAAGGGAGAGACAAGACCA+TGG | + | chr5_1:18105958-18105977 | Msa0721490:intron | 50.0% | |
| ! | CAGGTTGGAAATAGGACTCG+GGG | + | chr5_1:18105987-18106006 | Msa0721490:intron | 50.0% |
| TGGCGTCGTCAAGTCCTATA+AGG | - | chr5_1:18106160-18106179 | Msa0721480:intron | 50.0% | |
| CTTGCAGACTGCAAGCAGAA+GGG | + | chr5_1:18106339-18106358 | Msa0721490:CDS | 50.0% | |
| ACTTGCAGACTGCAAGCAGA+AGG | + | chr5_1:18106340-18106359 | Msa0721490:CDS | 50.0% | |
| CATCAAAGAGAGGTTCTCGG+TGG | + | chr5_1:18106397-18106416 | Msa0721490:CDS | 50.0% | |
| CACCATGTCACACATGGATG+CGG | + | chr5_1:18106439-18106458 | Msa0721490:CDS | 50.0% | |
| GATCTAGTCTCCTGTACACG+AGG | - | chr5_1:18107390-18107409 | Msa0721480:intron | 50.0% | |
| CACAATTGCTAGTTGGGGTC+AGG | - | chr5_1:18107617-18107636 | Msa0721480:intron | 50.0% | |
| GTCTAAGCCTTGCCTAACCA+AGG | - | chr5_1:18107767-18107786 | Msa0721480:intron | 50.0% | |
| !! | TGGCACTTCTTGCTCTGAGA+CGG | + | chr5_1:18108112-18108131 | None:intergenic | 50.0% |
| !! | CAGAGCAAGAAGTGCCAAGA+TGG | - | chr5_1:18108115-18108134 | Msa0721480:CDS | 50.0% |
| CGACCTTGTCGATGGTTCAT+TGG | - | chr5_1:18108174-18108193 | Msa0721480:CDS | 50.0% | |
| AGCCCAAGGAGACACGTTCT+TGG | - | chr5_1:18103253-18103272 | Msa0721480:intron | 55.0% | |
| GCATTCCCACTAGCACCATC+AGG | + | chr5_1:18103565-18103584 | None:intergenic | 55.0% | |
| GCCGCTTGAGCAAACGTTTG+AGG | - | chr5_1:18103878-18103897 | Msa0721480:intron | 55.0% | |
| GCGTACCTCAGGCATGAGAA+AGG | - | chr5_1:18103987-18104006 | Msa0721480:intron | 55.0% | |
| CCGTGGTAGCTAGAGATGTG+GGG | + | chr5_1:18104255-18104274 | Msa0721490:CDS | 55.0% | |
| CCCCACATCTCTAGCTACCA+CGG | - | chr5_1:18104252-18104271 | Msa0721480:intron | 55.0% | |
| AACAGAACGGACGGGTGGAA+AGG | + | chr5_1:18104771-18104790 | Msa0721490:CDS | 55.0% | |
| TTTCCACCCGTCCGTTCTGT+TGG | - | chr5_1:18104770-18104789 | Msa0721480:intron | 55.0% | |
| TTCCACCCGTCCGTTCTGTT+GGG | - | chr5_1:18104771-18104790 | Msa0721480:intron | 55.0% | |
| AACACCCCAACAGAACGGAC+GGG | + | chr5_1:18104779-18104798 | Msa0721490:CDS | 55.0% | |
| GAACACCCCAACAGAACGGA+CGG | + | chr5_1:18104780-18104799 | Msa0721490:CDS | 55.0% | |
| TCGGGAACACCCCAACAGAA+CGG | + | chr5_1:18104784-18104803 | Msa0721490:CDS | 55.0% | |
| GGAGTGGGTGAACAAAGGGA+AGG | + | chr5_1:18105330-18105349 | Msa0721490:intron | 55.0% | |
| ! | GTCGAGGATGCTGATTGGAG+TGG | + | chr5_1:18105346-18105365 | Msa0721490:intron | 55.0% |
| CCCATGTCGAGGATGCTGAT+TGG | + | chr5_1:18105351-18105370 | Msa0721490:intron | 55.0% | |
| TTGTACAGGACCCCATGTCG+AGG | + | chr5_1:18105362-18105381 | Msa0721490:intron | 55.0% | |
| TTCCCGTTTGGAAGGCTCAC+AGG | - | chr5_1:18105540-18105559 | Msa0721480:intron | 55.0% | |
| GTCCTGTGAGCCTTCCAAAC+GGG | + | chr5_1:18105545-18105564 | Msa0721490:intron | 55.0% | |
| GGGAAAGGATGGACAACCTC+AGG | + | chr5_1:18105822-18105841 | Msa0721490:intron | 55.0% | |
| TGTCCATCCTTTCCCTCGCT+TGG | - | chr5_1:18105827-18105846 | Msa0721480:intron | 55.0% | |
| CGCGTGCGTACCATAACTTG+TGG | + | chr5_1:18106047-18106066 | Msa0721490:intron | 55.0% | |
| GCACGCGTTCTTCTTGCACT+AGG | - | chr5_1:18106060-18106079 | Msa0721480:intron | 55.0% | |
| ACGACGCCACCTATCACCTA+TGG | + | chr5_1:18106149-18106168 | Msa0721490:CDS | 55.0% | |
| CACAGACCGCACTTGCAAGA+TGG | - | chr5_1:18106243-18106262 | Msa0721480:intron | 55.0% | |
| GCCATCAATTGCTGGATCCG+CGG | - | chr5_1:18106363-18106382 | Msa0721480:intron | 55.0% | |
| TCCGCGGATCCAGCAATTGA+TGG | + | chr5_1:18106367-18106386 | Msa0721490:CDS | 55.0% | |
| GAGAGGTTCTCGGTGGTCAA+TGG | + | chr5_1:18106390-18106409 | Msa0721490:CDS | 55.0% | |
| CGCATCCATGTGTGACATGG+TGG | - | chr5_1:18106437-18106456 | Msa0721480:intron | 55.0% | |
| GCGTTCCACCATGTCACACA+TGG | + | chr5_1:18106445-18106464 | Msa0721490:CDS | 55.0% | |
| CGCCGGATCTTGAAGATTGG+TGG | + | chr5_1:18106521-18106540 | Msa0721490:CDS | 55.0% | |
| GGTCGCCGGATCTTGAAGAT+TGG | + | chr5_1:18106524-18106543 | Msa0721490:CDS | 55.0% | |
| GAAACCAGATGAAGGGTCGC+CGG | + | chr5_1:18106538-18106557 | Msa0721490:CDS | 55.0% | |
| ! | GCGACCCTTCATCTGGTTTC+TGG | - | chr5_1:18106538-18106557 | Msa0721480:intron | 55.0% |
| TCCACCCGTCCGTTCTGTTG+GGG | - | chr5_1:18104772-18104791 | Msa0721480:intron | 60.0% | |
| ! | GTTGGGGCATCCGTCGTCTA+AGG | + | chr5_1:18105226-18105245 | Msa0721490:intron | 60.0% |
| GCAGCAGTGTTGCAAGCTGG+AGG | + | chr5_1:18105279-18105298 | Msa0721490:intron | 60.0% | |
| GGTGCAGCAGTGTTGCAAGC+TGG | + | chr5_1:18105282-18105301 | Msa0721490:intron | 60.0% | |
| GGAGCCACCCATCACATGAC+TGG | + | chr5_1:18105609-18105628 | Msa0721490:intron | 60.0% | |
| TGGACAACCTCAGGAGGCAG+AGG | + | chr5_1:18105813-18105832 | Msa0721490:intron | 60.0% | |
| GAGCCAAGCGAGGGAAAGGA+TGG | + | chr5_1:18105833-18105852 | Msa0721490:intron | 60.0% | |
| CAAGGAGCCAAGCGAGGGAA+AGG | + | chr5_1:18105837-18105856 | Msa0721490:intron | 60.0% | |
| CTGGACAAGGAGCCAAGCGA+GGG | + | chr5_1:18105842-18105861 | Msa0721490:intron | 60.0% | |
| GCTCCTTGTCCAGCATTGCG+TGG | - | chr5_1:18105849-18105868 | Msa0721480:intron | 60.0% | |
| CGACCACGCAATGCTGGACA+AGG | + | chr5_1:18105855-18105874 | Msa0721490:intron | 60.0% | |
| TCTCGGTGGTCAATGGTCCG+CGG | + | chr5_1:18106383-18106402 | Msa0721490:CDS | 60.0% | |
| TGGATGCGGCGTCAGAACTG+TGG | + | chr5_1:18106425-18106444 | Msa0721490:CDS | 60.0% | |
| CGCCGCATCCATGTGTGACA+TGG | - | chr5_1:18106434-18106453 | Msa0721480:intron | 60.0% | |
| ! | GACATGGTGGAACGCAGCGA+CGG | - | chr5_1:18106450-18106469 | Msa0721480:intron | 60.0% |
| GGAACGCAGCGACGGTTCAA+TGG | - | chr5_1:18106458-18106477 | Msa0721480:intron | 60.0% | |
| AGATCCGGCGACCCTTCATC+TGG | - | chr5_1:18106531-18106550 | Msa0721480:intron | 60.0% | |
| ACCCCAACAGAACGGACGGG+TGG | + | chr5_1:18104776-18104795 | Msa0721490:CDS | 65.0% | |
| TCAGGAGGCAGAGGACGTGG+AGG | + | chr5_1:18105804-18105823 | Msa0721490:intron | 65.0% | |
| TCCACGTCCTCTGCCTCCTG+AGG | - | chr5_1:18105803-18105822 | Msa0721480:intron | 65.0% | |
| ACCTCAGGAGGCAGAGGACG+TGG | + | chr5_1:18105807-18105826 | Msa0721490:intron | 65.0% | |
| GCTGGACAAGGAGCCAAGCG+AGG | + | chr5_1:18105843-18105862 | Msa0721490:intron | 65.0% | |
| GGAGAGCGACCACGCAATGC+TGG | + | chr5_1:18105861-18105880 | Msa0721490:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 18102442 | 18108204 | 18102442 | ID=Msa0721480;Name=Msa0721480 |
| chr5_1 | mRNA | 18102442 | 18108204 | 18102442 | ID=Msa0721480-mRNA-1;Parent=Msa0721480;Name=Msa0721480-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.4|0.6|0.5|0.8|5|0|191 |
| chr5_1 | exon | 18108093 | 18108204 | 18108093 | ID=Msa0721480-mRNA-1:exon:6906;Parent=Msa0721480-mRNA-1 |
| chr5_1 | exon | 18107305 | 18107395 | 18107305 | ID=Msa0721480-mRNA-1:exon:6905;Parent=Msa0721480-mRNA-1 |
| chr5_1 | exon | 18102894 | 18103040 | 18102894 | ID=Msa0721480-mRNA-1:exon:6904;Parent=Msa0721480-mRNA-1 |
| chr5_1 | exon | 18102673 | 18102773 | 18102673 | ID=Msa0721480-mRNA-1:exon:6903;Parent=Msa0721480-mRNA-1 |
| chr5_1 | exon | 18102442 | 18102566 | 18102442 | ID=Msa0721480-mRNA-1:exon:6902;Parent=Msa0721480-mRNA-1 |
| chr5_1 | CDS | 18108093 | 18108204 | 18108093 | ID=Msa0721480-mRNA-1:cds;Parent=Msa0721480-mRNA-1 |
| chr5_1 | CDS | 18107305 | 18107395 | 18107305 | ID=Msa0721480-mRNA-1:cds;Parent=Msa0721480-mRNA-1 |
| chr5_1 | CDS | 18102894 | 18103040 | 18102894 | ID=Msa0721480-mRNA-1:cds;Parent=Msa0721480-mRNA-1 |
| chr5_1 | CDS | 18102673 | 18102773 | 18102673 | ID=Msa0721480-mRNA-1:cds;Parent=Msa0721480-mRNA-1 |
| chr5_1 | CDS | 18102442 | 18102566 | 18102442 | ID=Msa0721480-mRNA-1:cds;Parent=Msa0721480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
