Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722670 | AES97003.2 | 93.333 | 60 | 4 | 0 | 6 | 65 | 165 | 224 | 1.71e-30 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722670 | sp|Q9C5U0|AHK4_ARATH | 72.414 | 58 | 16 | 0 | 6 | 63 | 958 | 1015 | 2.12e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722670 | G7JWS8 | 93.333 | 60 | 4 | 0 | 6 | 65 | 165 | 224 | 8.15e-31 | 116 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0722670 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722670 | MtrunA17_Chr8g0392301 | 79.310 | 58 | 12 | 0 | 6 | 63 | 874 | 931 | 1.35e-25 | 97.4 |
| Msa0722670 | MtrunA17_Chr8g0377481 | 68.421 | 57 | 18 | 0 | 7 | 63 | 855 | 911 | 1.92e-20 | 82.8 |
| Msa0722670 | MtrunA17_Chr3g0122391 | 65.517 | 58 | 20 | 0 | 7 | 64 | 913 | 970 | 1.55e-19 | 80.1 |
| Msa0722670 | MtrunA17_Chr5g0447641 | 59.322 | 59 | 24 | 0 | 6 | 64 | 1087 | 1145 | 4.54e-19 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722670 | AT2G01830.5 | 72.414 | 58 | 16 | 0 | 6 | 63 | 947 | 1004 | 2.13e-23 | 91.7 |
| Msa0722670 | AT2G01830.2 | 72.414 | 58 | 16 | 0 | 6 | 63 | 958 | 1015 | 2.15e-23 | 91.7 |
| Msa0722670 | AT2G01830.1 | 72.414 | 58 | 16 | 0 | 6 | 63 | 935 | 992 | 2.18e-23 | 91.7 |
| Msa0722670 | AT2G01830.4 | 72.414 | 58 | 16 | 0 | 6 | 63 | 935 | 992 | 2.18e-23 | 91.7 |
| Msa0722670 | AT2G01830.6 | 72.414 | 58 | 16 | 0 | 6 | 63 | 935 | 992 | 2.18e-23 | 91.7 |
| Msa0722670 | AT2G01830.3 | 72.414 | 58 | 16 | 0 | 6 | 63 | 935 | 992 | 2.18e-23 | 91.7 |
| Msa0722670 | AT5G35750.1 | 67.241 | 58 | 19 | 0 | 6 | 63 | 1048 | 1105 | 9.03e-21 | 84.0 |
| Msa0722670 | AT1G27320.1 | 67.241 | 58 | 19 | 0 | 6 | 63 | 903 | 960 | 2.25e-20 | 82.8 |
Find 14 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTCCATCATCTGAATT+TGG | 0.221341 | 5_1:+20081720 | None:intergenic |
| AAGCAATACCCATCCATTTC+TGG | 0.235303 | 5_1:+20082538 | None:intergenic |
| TAAAGTTGATGCTTGCTTCA+TGG | 0.312853 | 5_1:-20082572 | Msa0722670:CDS |
| GGACATTCAAATGCCAGAAA+TGG | 0.371181 | 5_1:-20082551 | Msa0722670:CDS |
| GCATCTGCAGCTACCCTCTC+AGG | 0.458428 | 5_1:+20082670 | None:intergenic |
| AAGCAAGCATCAACTTTATG+AGG | 0.502372 | 5_1:+20082577 | None:intergenic |
| AACTAACCAAATTCAGATGA+TGG | 0.535150 | 5_1:-20081726 | Msa0722670:CDS |
| ATTCAAATGCCAGAAATGGA+TGG | 0.546140 | 5_1:-20082547 | Msa0722670:CDS |
| GACAATTGCGTAAACCTGAG+AGG | 0.559612 | 5_1:-20082684 | None:intergenic |
| TTCAAATGCCAGAAATGGAT+GGG | 0.564303 | 5_1:-20082546 | Msa0722670:intron |
| ACAATTGCGTAAACCTGAGA+GGG | 0.621778 | 5_1:-20082683 | None:intergenic |
| AAAGTTTGGAGTTGATGTGA+AGG | 0.654433 | 5_1:-20082641 | Msa0722670:CDS |
| AAGTTTGGAGTTGATGTGAA+GGG | 0.665780 | 5_1:-20082640 | Msa0722670:CDS |
| GATGTGAAGGGTGTTGAAAG+CGG | 0.718364 | 5_1:-20082628 | Msa0722670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATATGTATAATAAAGC+AGG | + | chr5_1:20081884-20081903 | None:intergenic | 15.0% |
| !!! | TTATAGTTATTTTGAAACTT+TGG | - | chr5_1:20081906-20081925 | Msa0722670:intron | 15.0% |
| !!! | ATAATTTTGATGTATTTTTC+AGG | - | chr5_1:20082634-20082653 | Msa0722670:CDS | 15.0% |
| !! | TATAATATGTATAATAAAGC+AGG | + | chr5_1:20081884-20081903 | None:intergenic | 15.0% |
| !!! | TTATAGTTATTTTGAAACTT+TGG | - | chr5_1:20081906-20081925 | Msa0722670:intron | 15.0% |
| !!! | ATAATTTTGATGTATTTTTC+AGG | - | chr5_1:20082634-20082653 | Msa0722670:CDS | 15.0% |
| !! | AAATTGATTACATTACTACA+AGG | + | chr5_1:20082195-20082214 | None:intergenic | 20.0% |
| !! | AAATTGATTACATTACTACA+AGG | + | chr5_1:20082195-20082214 | None:intergenic | 20.0% |
| !!! | TATTTTGAAACTTTGGATGA+AGG | - | chr5_1:20081913-20081932 | Msa0722670:intron | 25.0% |
| ! | AAGGTAATGACTTTGTATAT+TGG | - | chr5_1:20081932-20081951 | Msa0722670:intron | 25.0% |
| ! | CATTACTACAAGGATTTAAT+CGG | + | chr5_1:20082185-20082204 | None:intergenic | 25.0% |
| !! | AATCAATTTGCTTCAAATCT+TGG | - | chr5_1:20082206-20082225 | Msa0722670:intron | 25.0% |
| ! | TAGTATATGTTGAAGTATAG+GGG | + | chr5_1:20082401-20082420 | None:intergenic | 25.0% |
| ! | CTAGTATATGTTGAAGTATA+GGG | + | chr5_1:20082402-20082421 | None:intergenic | 25.0% |
| ! | TCTAGTATATGTTGAAGTAT+AGG | + | chr5_1:20082403-20082422 | None:intergenic | 25.0% |
| ! | CTACTAAAGTAATTCATTTC+AGG | - | chr5_1:20082555-20082574 | Msa0722670:CDS | 25.0% |
| ! | ACAAGTTATATGAAATGGAA+AGG | + | chr5_1:20082589-20082608 | None:intergenic | 25.0% |
| !! | ATTTCATATAACTTGTGCAT+CGG | - | chr5_1:20082593-20082612 | Msa0722670:CDS | 25.0% |
| !!! | TATTTTGAAACTTTGGATGA+AGG | - | chr5_1:20081913-20081932 | Msa0722670:intron | 25.0% |
| ! | AAGGTAATGACTTTGTATAT+TGG | - | chr5_1:20081932-20081951 | Msa0722670:intron | 25.0% |
| ! | CATTACTACAAGGATTTAAT+CGG | + | chr5_1:20082185-20082204 | None:intergenic | 25.0% |
| !! | AATCAATTTGCTTCAAATCT+TGG | - | chr5_1:20082206-20082225 | Msa0722670:intron | 25.0% |
| ! | TAGTATATGTTGAAGTATAG+GGG | + | chr5_1:20082401-20082420 | None:intergenic | 25.0% |
| ! | CTAGTATATGTTGAAGTATA+GGG | + | chr5_1:20082402-20082421 | None:intergenic | 25.0% |
| ! | TCTAGTATATGTTGAAGTAT+AGG | + | chr5_1:20082403-20082422 | None:intergenic | 25.0% |
| ! | CTACTAAAGTAATTCATTTC+AGG | - | chr5_1:20082555-20082574 | Msa0722670:CDS | 25.0% |
| ! | ACAAGTTATATGAAATGGAA+AGG | + | chr5_1:20082589-20082608 | None:intergenic | 25.0% |
| !! | ATTTCATATAACTTGTGCAT+CGG | - | chr5_1:20082593-20082612 | Msa0722670:CDS | 25.0% |
| GCAGATGCATTAAAAAAGTT+TGG | - | chr5_1:20081736-20081755 | Msa0722670:CDS | 30.0% | |
| TTAATCACATCTTACCATGT+AGG | - | chr5_1:20082059-20082078 | Msa0722670:intron | 30.0% | |
| CTAATCATATCTCACTATTC+TGG | + | chr5_1:20082123-20082142 | None:intergenic | 30.0% | |
| TTGATAAGCACCTAAATACT+TGG | - | chr5_1:20082260-20082279 | Msa0722670:intron | 30.0% | |
| ! | GTCTTTTTCTCCAAGTATTT+AGG | + | chr5_1:20082273-20082292 | None:intergenic | 30.0% |
| ATGATAGAGTCGTCAATTAT+GGG | + | chr5_1:20082371-20082390 | None:intergenic | 30.0% | |
| TATGATAGAGTCGTCAATTA+TGG | + | chr5_1:20082372-20082391 | None:intergenic | 30.0% | |
| ACCTTAAAAACTAGCTATCA+AGG | - | chr5_1:20082518-20082537 | Msa0722670:intron | 30.0% | |
| CCTTAAAAACTAGCTATCAA+GGG | - | chr5_1:20082519-20082538 | Msa0722670:intron | 30.0% | |
| CTTAAAAACTAGCTATCAAG+GGG | - | chr5_1:20082520-20082539 | Msa0722670:intron | 30.0% | |
| TTAAAAACTAGCTATCAAGG+GGG | - | chr5_1:20082521-20082540 | Msa0722670:intron | 30.0% | |
| GATGCACAAGTTATATGAAA+TGG | + | chr5_1:20082594-20082613 | None:intergenic | 30.0% | |
| !!! | TGATGTATTTTTCAGGTTTG+AGG | - | chr5_1:20082641-20082660 | Msa0722670:CDS | 30.0% |
| AACTAACCAAATTCAGATGA+TGG | - | chr5_1:20082665-20082684 | Msa0722670:CDS | 30.0% | |
| GCAGATGCATTAAAAAAGTT+TGG | - | chr5_1:20081736-20081755 | Msa0722670:CDS | 30.0% | |
| TTAATCACATCTTACCATGT+AGG | - | chr5_1:20082059-20082078 | Msa0722670:intron | 30.0% | |
| CTAATCATATCTCACTATTC+TGG | + | chr5_1:20082123-20082142 | None:intergenic | 30.0% | |
| TTGATAAGCACCTAAATACT+TGG | - | chr5_1:20082260-20082279 | Msa0722670:intron | 30.0% | |
| ! | GTCTTTTTCTCCAAGTATTT+AGG | + | chr5_1:20082273-20082292 | None:intergenic | 30.0% |
| ATGATAGAGTCGTCAATTAT+GGG | + | chr5_1:20082371-20082390 | None:intergenic | 30.0% | |
| TATGATAGAGTCGTCAATTA+TGG | + | chr5_1:20082372-20082391 | None:intergenic | 30.0% | |
| ACCTTAAAAACTAGCTATCA+AGG | - | chr5_1:20082518-20082537 | Msa0722670:intron | 30.0% | |
| CCTTAAAAACTAGCTATCAA+GGG | - | chr5_1:20082519-20082538 | Msa0722670:intron | 30.0% | |
| CTTAAAAACTAGCTATCAAG+GGG | - | chr5_1:20082520-20082539 | Msa0722670:intron | 30.0% | |
| TTAAAAACTAGCTATCAAGG+GGG | - | chr5_1:20082521-20082540 | Msa0722670:intron | 30.0% | |
| GATGCACAAGTTATATGAAA+TGG | + | chr5_1:20082594-20082613 | None:intergenic | 30.0% | |
| !!! | TGATGTATTTTTCAGGTTTG+AGG | - | chr5_1:20082641-20082660 | Msa0722670:CDS | 30.0% |
| AACTAACCAAATTCAGATGA+TGG | - | chr5_1:20082665-20082684 | Msa0722670:CDS | 30.0% | |
| !! | AAAGTTTGGAGTTGATGTGA+AGG | - | chr5_1:20081750-20081769 | Msa0722670:intron | 35.0% |
| !! | AAGTTTGGAGTTGATGTGAA+GGG | - | chr5_1:20081751-20081770 | Msa0722670:intron | 35.0% |
| AAGCAAGCATCAACTTTATG+AGG | + | chr5_1:20081817-20081836 | None:intergenic | 35.0% | |
| !! | TAAAGTTGATGCTTGCTTCA+TGG | - | chr5_1:20081819-20081838 | Msa0722670:intron | 35.0% |
| ATTCAAATGCCAGAAATGGA+TGG | - | chr5_1:20081844-20081863 | Msa0722670:intron | 35.0% | |
| TTCAAATGCCAGAAATGGAT+GGG | - | chr5_1:20081845-20081864 | Msa0722670:intron | 35.0% | |
| ! | GGTGTTTGTAGAGACATTTT+AGG | - | chr5_1:20082080-20082099 | Msa0722670:intron | 35.0% |
| ACTTAAAAGCTAGCAGTCAA+GGG | - | chr5_1:20082291-20082310 | Msa0722670:intron | 35.0% | |
| TGATAGAGTCGTCAATTATG+GGG | + | chr5_1:20082370-20082389 | None:intergenic | 35.0% | |
| TTCAAAATTGTAGCCCTTTC+TGG | - | chr5_1:20082434-20082453 | Msa0722670:intron | 35.0% | |
| TGTGATCAGTGACTTAGAAA+GGG | + | chr5_1:20082486-20082505 | None:intergenic | 35.0% | |
| TTGTGATCAGTGACTTAGAA+AGG | + | chr5_1:20082487-20082506 | None:intergenic | 35.0% | |
| !!! | CCCTTGATAGCTAGTTTTTA+AGG | + | chr5_1:20082522-20082541 | None:intergenic | 35.0% |
| TAAAAACTAGCTATCAAGGG+GGG | - | chr5_1:20082522-20082541 | Msa0722670:intron | 35.0% | |
| TGTTCTCCATCATCTGAATT+TGG | + | chr5_1:20082674-20082693 | None:intergenic | 35.0% | |
| !! | AAAGTTTGGAGTTGATGTGA+AGG | - | chr5_1:20081750-20081769 | Msa0722670:intron | 35.0% |
| !! | AAGTTTGGAGTTGATGTGAA+GGG | - | chr5_1:20081751-20081770 | Msa0722670:intron | 35.0% |
| AAGCAAGCATCAACTTTATG+AGG | + | chr5_1:20081817-20081836 | None:intergenic | 35.0% | |
| !! | TAAAGTTGATGCTTGCTTCA+TGG | - | chr5_1:20081819-20081838 | Msa0722670:intron | 35.0% |
| ATTCAAATGCCAGAAATGGA+TGG | - | chr5_1:20081844-20081863 | Msa0722670:intron | 35.0% | |
| TTCAAATGCCAGAAATGGAT+GGG | - | chr5_1:20081845-20081864 | Msa0722670:intron | 35.0% | |
| ! | GGTGTTTGTAGAGACATTTT+AGG | - | chr5_1:20082080-20082099 | Msa0722670:intron | 35.0% |
| ACTTAAAAGCTAGCAGTCAA+GGG | - | chr5_1:20082291-20082310 | Msa0722670:intron | 35.0% | |
| TGATAGAGTCGTCAATTATG+GGG | + | chr5_1:20082370-20082389 | None:intergenic | 35.0% | |
| TTCAAAATTGTAGCCCTTTC+TGG | - | chr5_1:20082434-20082453 | Msa0722670:intron | 35.0% | |
| TGTGATCAGTGACTTAGAAA+GGG | + | chr5_1:20082486-20082505 | None:intergenic | 35.0% | |
| TTGTGATCAGTGACTTAGAA+AGG | + | chr5_1:20082487-20082506 | None:intergenic | 35.0% | |
| !!! | CCCTTGATAGCTAGTTTTTA+AGG | + | chr5_1:20082522-20082541 | None:intergenic | 35.0% |
| TAAAAACTAGCTATCAAGGG+GGG | - | chr5_1:20082522-20082541 | Msa0722670:intron | 35.0% | |
| TGTTCTCCATCATCTGAATT+TGG | + | chr5_1:20082674-20082693 | None:intergenic | 35.0% | |
| GGACATTCAAATGCCAGAAA+TGG | - | chr5_1:20081840-20081859 | Msa0722670:intron | 40.0% | |
| AAGCAATACCCATCCATTTC+TGG | + | chr5_1:20081856-20081875 | None:intergenic | 40.0% | |
| TGTCTCTACAAACACCTACA+TGG | + | chr5_1:20082076-20082095 | None:intergenic | 40.0% | |
| GACTTAAAAGCTAGCAGTCA+AGG | - | chr5_1:20082290-20082309 | Msa0722670:intron | 40.0% | |
| CTTAAAAGCTAGCAGTCAAG+GGG | - | chr5_1:20082292-20082311 | Msa0722670:intron | 40.0% | |
| TTATGGGGTTCCTAAGTCAT+GGG | + | chr5_1:20082355-20082374 | None:intergenic | 40.0% | |
| ATTATGGGGTTCCTAAGTCA+TGG | + | chr5_1:20082356-20082375 | None:intergenic | 40.0% | |
| TAGAAAGGGCTACCAACTAA+GGG | + | chr5_1:20082472-20082491 | None:intergenic | 40.0% | |
| TTAGAAAGGGCTACCAACTA+AGG | + | chr5_1:20082473-20082492 | None:intergenic | 40.0% | |
| AAAAACTAGCTATCAAGGGG+GGG | - | chr5_1:20082523-20082542 | Msa0722670:intron | 40.0% | |
| !! | TATAACTTGTGCATCGGCTT+TGG | - | chr5_1:20082599-20082618 | Msa0722670:CDS | 40.0% |
| !! | ATAACTTGTGCATCGGCTTT+GGG | - | chr5_1:20082600-20082619 | Msa0722670:CDS | 40.0% |
| GGACATTCAAATGCCAGAAA+TGG | - | chr5_1:20081840-20081859 | Msa0722670:intron | 40.0% | |
| AAGCAATACCCATCCATTTC+TGG | + | chr5_1:20081856-20081875 | None:intergenic | 40.0% | |
| TGTCTCTACAAACACCTACA+TGG | + | chr5_1:20082076-20082095 | None:intergenic | 40.0% | |
| GACTTAAAAGCTAGCAGTCA+AGG | - | chr5_1:20082290-20082309 | Msa0722670:intron | 40.0% | |
| CTTAAAAGCTAGCAGTCAAG+GGG | - | chr5_1:20082292-20082311 | Msa0722670:intron | 40.0% | |
| TTATGGGGTTCCTAAGTCAT+GGG | + | chr5_1:20082355-20082374 | None:intergenic | 40.0% | |
| ATTATGGGGTTCCTAAGTCA+TGG | + | chr5_1:20082356-20082375 | None:intergenic | 40.0% | |
| TAGAAAGGGCTACCAACTAA+GGG | + | chr5_1:20082472-20082491 | None:intergenic | 40.0% | |
| TTAGAAAGGGCTACCAACTA+AGG | + | chr5_1:20082473-20082492 | None:intergenic | 40.0% | |
| AAAAACTAGCTATCAAGGGG+GGG | - | chr5_1:20082523-20082542 | Msa0722670:intron | 40.0% | |
| !! | TATAACTTGTGCATCGGCTT+TGG | - | chr5_1:20082599-20082618 | Msa0722670:CDS | 40.0% |
| !! | ATAACTTGTGCATCGGCTTT+GGG | - | chr5_1:20082600-20082619 | Msa0722670:CDS | 40.0% |
| !! | GATGTGAAGGGTGTTGAAAG+CGG | - | chr5_1:20081763-20081782 | Msa0722670:intron | 45.0% |
| !! | TCGGAGTACTTAAGTTGGCT+TGG | + | chr5_1:20082324-20082343 | None:intergenic | 45.0% |
| TTCCTAAGTCATGGGATGCT+CGG | + | chr5_1:20082347-20082366 | None:intergenic | 45.0% | |
| AGAAAGGGCTACCAACTAAG+GGG | + | chr5_1:20082471-20082490 | None:intergenic | 45.0% | |
| !! | GATGTGAAGGGTGTTGAAAG+CGG | - | chr5_1:20081763-20081782 | Msa0722670:intron | 45.0% |
| !! | TCGGAGTACTTAAGTTGGCT+TGG | + | chr5_1:20082324-20082343 | None:intergenic | 45.0% |
| TTCCTAAGTCATGGGATGCT+CGG | + | chr5_1:20082347-20082366 | None:intergenic | 45.0% | |
| AGAAAGGGCTACCAACTAAG+GGG | + | chr5_1:20082471-20082490 | None:intergenic | 45.0% | |
| !!! | TTTTATATTAATAGTTTAAT+TGG | - | chr5_1:20082001-20082020 | Msa0722670:intron | 5.0% |
| !!! | TTTTATATTAATAGTTTAAT+TGG | - | chr5_1:20082001-20082020 | Msa0722670:intron | 5.0% |
| ! | CTCGGTCGGAGTACTTAAGT+TGG | + | chr5_1:20082329-20082348 | None:intergenic | 50.0% |
| TAAGTCATGGGATGCTCGGT+CGG | + | chr5_1:20082343-20082362 | None:intergenic | 50.0% | |
| ! | TTGTAGCCCTTTCTGGTCAG+TGG | - | chr5_1:20082441-20082460 | Msa0722670:intron | 50.0% |
| GAAAGGGCTACCAACTAAGG+GGG | + | chr5_1:20082470-20082489 | None:intergenic | 50.0% | |
| ! | CTCGGTCGGAGTACTTAAGT+TGG | + | chr5_1:20082329-20082348 | None:intergenic | 50.0% |
| TAAGTCATGGGATGCTCGGT+CGG | + | chr5_1:20082343-20082362 | None:intergenic | 50.0% | |
| ! | TTGTAGCCCTTTCTGGTCAG+TGG | - | chr5_1:20082441-20082460 | Msa0722670:intron | 50.0% |
| GAAAGGGCTACCAACTAAGG+GGG | + | chr5_1:20082470-20082489 | None:intergenic | 50.0% | |
| GACCGAGCATCCCATGACTT+AGG | - | chr5_1:20082342-20082361 | Msa0722670:intron | 55.0% | |
| GGGTGACCACTGACCAGAAA+GGG | + | chr5_1:20082450-20082469 | None:intergenic | 55.0% | |
| TCAGTGGTCACCCCCTTAGT+TGG | - | chr5_1:20082457-20082476 | Msa0722670:intron | 55.0% | |
| GACCGAGCATCCCATGACTT+AGG | - | chr5_1:20082342-20082361 | Msa0722670:intron | 55.0% | |
| GGGTGACCACTGACCAGAAA+GGG | + | chr5_1:20082450-20082469 | None:intergenic | 55.0% | |
| TCAGTGGTCACCCCCTTAGT+TGG | - | chr5_1:20082457-20082476 | Msa0722670:intron | 55.0% | |
| GCATCTGCAGCTACCCTCTC+AGG | + | chr5_1:20081724-20081743 | None:intergenic | 60.0% | |
| GGGGTGACCACTGACCAGAA+AGG | + | chr5_1:20082451-20082470 | None:intergenic | 60.0% | |
| GCATCTGCAGCTACCCTCTC+AGG | + | chr5_1:20081724-20081743 | None:intergenic | 60.0% | |
| GGGGTGACCACTGACCAGAA+AGG | + | chr5_1:20082451-20082470 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 20081712 | 20082701 | 20081712 | ID=Msa0722670;Name=Msa0722670 |
| chr5_1 | mRNA | 20081712 | 20082701 | 20081712 | ID=Msa0722670-mRNA-1;Parent=Msa0722670;Name=Msa0722670-mRNA-1;_AED=0.59;_eAED=0.63;_QI=0|0|0|0.5|1|1|2|0|66 |
| chr5_1 | exon | 20082547 | 20082701 | 20082547 | ID=Msa0722670-mRNA-1:exon:7602;Parent=Msa0722670-mRNA-1 |
| chr5_1 | exon | 20081712 | 20081757 | 20081712 | ID=Msa0722670-mRNA-1:exon:7601;Parent=Msa0722670-mRNA-1 |
| chr5_1 | CDS | 20082547 | 20082701 | 20082547 | ID=Msa0722670-mRNA-1:cds;Parent=Msa0722670-mRNA-1 |
| chr5_1 | CDS | 20081712 | 20081757 | 20081712 | ID=Msa0722670-mRNA-1:cds;Parent=Msa0722670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
