Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0725490 | XP_024629994.1 | 72.925 | 783 | 190 | 4 | 1 | 783 | 16 | 776 | 0.0 | 1189 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0725490 | sp|Q9SZL8|FRS5_ARATH | 34.697 | 660 | 410 | 10 | 36 | 682 | 73 | 724 | 2.08e-121 | 391 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0725490 | A0A3Q7Y261 | 76.648 | 728 | 164 | 3 | 1 | 727 | 1 | 723 | 0.0 | 1153 |
Gene ID | Type | Classification |
---|---|---|
Msa0725490 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0725490 | MtrunA17_Chr3g0082121 | 74.101 | 695 | 172 | 1 | 1 | 695 | 8 | 694 | 0.0 | 1070 |
Msa0725490 | MtrunA17_Chr2g0324011 | 46.838 | 585 | 302 | 5 | 28 | 606 | 2 | 583 | 0.0 | 547 |
Msa0725490 | MtrunA17_Chr1g0164591 | 76.825 | 315 | 65 | 1 | 114 | 428 | 1 | 307 | 2.35e-176 | 514 |
Msa0725490 | MtrunA17_Chr1g0203721 | 38.763 | 663 | 385 | 7 | 32 | 682 | 59 | 712 | 4.37e-155 | 479 |
Msa0725490 | MtrunA17_Chr6g0458391 | 41.986 | 574 | 300 | 9 | 28 | 592 | 217 | 766 | 7.33e-151 | 465 |
Msa0725490 | MtrunA17_Chr6g0458391 | 33.540 | 161 | 103 | 3 | 7 | 167 | 64 | 220 | 3.38e-18 | 90.1 |
Msa0725490 | MtrunA17_Chr5g0448761 | 35.202 | 642 | 402 | 6 | 36 | 665 | 60 | 699 | 2.16e-130 | 412 |
Msa0725490 | MtrunA17_Chr8g0363841 | 34.347 | 559 | 350 | 8 | 44 | 591 | 25 | 577 | 4.59e-108 | 349 |
Msa0725490 | MtrunA17_Chr1g0202341 | 35.026 | 571 | 348 | 8 | 36 | 591 | 47 | 609 | 9.28e-108 | 349 |
Msa0725490 | MtrunA17_Chr2g0287651 | 32.131 | 610 | 392 | 11 | 38 | 636 | 77 | 675 | 6.87e-99 | 330 |
Msa0725490 | MtrunA17_Chr1g0207551 | 29.036 | 799 | 502 | 16 | 29 | 807 | 27 | 780 | 6.44e-97 | 323 |
Msa0725490 | MtrunA17_Chr2g0329031 | 29.833 | 657 | 413 | 16 | 36 | 677 | 14 | 637 | 4.66e-90 | 303 |
Msa0725490 | MtrunA17_Chr7g0258861 | 48.814 | 295 | 141 | 7 | 30 | 318 | 4 | 294 | 4.72e-83 | 270 |
Msa0725490 | MtrunA17_Chr3g0080351 | 29.147 | 645 | 396 | 13 | 31 | 649 | 71 | 680 | 1.79e-82 | 284 |
Msa0725490 | MtrunA17_Chr5g0448511 | 32.525 | 495 | 316 | 6 | 220 | 708 | 22 | 504 | 2.49e-80 | 271 |
Msa0725490 | MtrunA17_Chr5g0441581 | 29.760 | 625 | 405 | 14 | 24 | 634 | 20 | 624 | 6.01e-79 | 271 |
Msa0725490 | MtrunA17_Chr5g0440451 | 30.109 | 641 | 406 | 14 | 36 | 653 | 43 | 664 | 1.52e-78 | 275 |
Msa0725490 | MtrunA17_Chr2g0276841 | 31.228 | 570 | 378 | 9 | 28 | 588 | 62 | 626 | 2.01e-78 | 270 |
Msa0725490 | MtrunA17_Chr3g0118611 | 33.857 | 446 | 282 | 6 | 215 | 653 | 122 | 561 | 1.37e-77 | 269 |
Msa0725490 | MtrunA17_Chr2g0296781 | 29.894 | 756 | 450 | 29 | 40 | 763 | 1 | 708 | 5.46e-75 | 261 |
Msa0725490 | MtrunA17_Chr1g0198761 | 30.769 | 572 | 364 | 12 | 42 | 592 | 53 | 613 | 1.73e-73 | 258 |
Msa0725490 | MtrunA17_Chr1g0203051 | 27.563 | 595 | 383 | 11 | 2 | 578 | 57 | 621 | 8.21e-73 | 253 |
Msa0725490 | MtrunA17_Chr2g0294841 | 28.827 | 614 | 398 | 13 | 1 | 586 | 1 | 603 | 1.92e-71 | 252 |
Msa0725490 | MtrunA17_Chr2g0287061 | 30.756 | 569 | 335 | 16 | 36 | 593 | 183 | 703 | 2.81e-69 | 246 |
Msa0725490 | MtrunA17_Chr2g0291581 | 29.511 | 593 | 372 | 15 | 18 | 591 | 56 | 621 | 2.36e-66 | 236 |
Msa0725490 | MtrunA17_Chr6g0477261 | 32.301 | 452 | 276 | 12 | 160 | 591 | 4 | 445 | 1.72e-65 | 233 |
Msa0725490 | MtrunA17_Chr2g0290391 | 28.889 | 585 | 382 | 13 | 28 | 592 | 44 | 614 | 3.78e-64 | 230 |
Msa0725490 | MtrunA17_Chr1g0196541 | 28.397 | 574 | 365 | 14 | 40 | 588 | 1 | 553 | 1.41e-61 | 223 |
Msa0725490 | MtrunA17_Chr1g0149131 | 78.571 | 112 | 24 | 0 | 315 | 426 | 1 | 112 | 1.51e-59 | 199 |
Msa0725490 | MtrunA17_Chr5g0401121 | 69.014 | 142 | 40 | 1 | 1 | 142 | 25 | 162 | 1.05e-57 | 195 |
Msa0725490 | MtrunA17_Chr2g0291591 | 28.125 | 480 | 326 | 8 | 36 | 509 | 64 | 530 | 3.53e-52 | 192 |
Msa0725490 | MtrunA17_Chr5g0431001 | 30.501 | 459 | 296 | 10 | 8 | 448 | 30 | 483 | 1.71e-48 | 180 |
Msa0725490 | MtrunA17_Chr4g0033611 | 44.860 | 107 | 53 | 3 | 36 | 140 | 76 | 178 | 9.96e-19 | 87.0 |
Msa0725490 | MtrunA17_Chr7g0238821 | 44.954 | 109 | 56 | 3 | 40 | 147 | 1 | 106 | 4.99e-18 | 80.5 |
Msa0725490 | MtrunA17_Chr2g0308841 | 23.288 | 219 | 159 | 4 | 382 | 593 | 13 | 229 | 1.42e-17 | 84.0 |
Msa0725490 | MtrunA17_Chr2g0329421 | 40.187 | 107 | 58 | 3 | 36 | 140 | 27 | 129 | 8.02e-17 | 80.5 |
Msa0725490 | MtrunA17_Chr3g0078041 | 40.000 | 110 | 62 | 3 | 36 | 142 | 50 | 158 | 2.43e-14 | 73.6 |
Msa0725490 | MtrunA17_Chr7g0233911 | 40.000 | 105 | 59 | 3 | 36 | 138 | 34 | 136 | 3.69e-13 | 69.7 |
Msa0725490 | MtrunA17_Chr2g0329361 | 33.858 | 127 | 79 | 3 | 15 | 138 | 40 | 164 | 1.76e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0725490 | AT4G38180.1 | 34.697 | 660 | 410 | 10 | 36 | 682 | 73 | 724 | 2.12e-122 | 391 |
Msa0725490 | AT4G15090.1 | 30.746 | 657 | 435 | 10 | 18 | 666 | 36 | 680 | 1.88e-96 | 323 |
Msa0725490 | AT4G15090.5 | 30.746 | 657 | 435 | 10 | 18 | 666 | 36 | 680 | 1.88e-96 | 323 |
Msa0725490 | AT4G15090.3 | 30.746 | 657 | 435 | 10 | 18 | 666 | 36 | 680 | 1.88e-96 | 323 |
Msa0725490 | AT4G15090.2 | 30.746 | 657 | 435 | 10 | 18 | 666 | 36 | 680 | 1.88e-96 | 323 |
Msa0725490 | AT4G15090.4 | 30.746 | 657 | 435 | 10 | 18 | 666 | 36 | 680 | 1.88e-96 | 323 |
Msa0725490 | AT3G22170.2 | 31.024 | 635 | 369 | 14 | 32 | 638 | 66 | 659 | 1.85e-90 | 306 |
Msa0725490 | AT3G22170.1 | 31.024 | 635 | 369 | 14 | 32 | 638 | 66 | 659 | 1.85e-90 | 306 |
Msa0725490 | AT1G76320.3 | 30.303 | 627 | 402 | 16 | 40 | 653 | 1 | 605 | 2.50e-85 | 288 |
Msa0725490 | AT1G76320.1 | 30.192 | 626 | 404 | 15 | 40 | 653 | 1 | 605 | 4.03e-85 | 290 |
Msa0725490 | AT1G76320.4 | 30.192 | 626 | 404 | 15 | 40 | 653 | 1 | 605 | 4.03e-85 | 290 |
Msa0725490 | AT1G76320.2 | 30.192 | 626 | 404 | 15 | 40 | 653 | 1 | 605 | 4.73e-85 | 289 |
Msa0725490 | AT2G27110.2 | 30.378 | 609 | 382 | 13 | 36 | 637 | 49 | 622 | 2.98e-80 | 279 |
Msa0725490 | AT2G27110.1 | 30.378 | 609 | 382 | 13 | 36 | 637 | 49 | 622 | 2.98e-80 | 279 |
Msa0725490 | AT3G06250.2 | 29.194 | 620 | 381 | 13 | 36 | 648 | 190 | 758 | 1.04e-76 | 267 |
Msa0725490 | AT3G06250.1 | 29.194 | 620 | 381 | 13 | 36 | 648 | 190 | 758 | 1.04e-76 | 267 |
Msa0725490 | AT3G06250.3 | 29.194 | 620 | 381 | 13 | 36 | 648 | 190 | 758 | 1.04e-76 | 267 |
Msa0725490 | AT5G18960.2 | 29.647 | 624 | 376 | 15 | 36 | 648 | 211 | 782 | 9.86e-75 | 262 |
Msa0725490 | AT5G18960.1 | 29.647 | 624 | 376 | 15 | 36 | 648 | 211 | 782 | 9.86e-75 | 262 |
Msa0725490 | AT1G10240.2 | 29.772 | 571 | 375 | 11 | 33 | 588 | 45 | 604 | 9.66e-74 | 257 |
Msa0725490 | AT1G10240.1 | 29.772 | 571 | 375 | 11 | 33 | 588 | 45 | 604 | 9.66e-74 | 257 |
Msa0725490 | AT2G27110.3 | 33.023 | 430 | 274 | 7 | 215 | 637 | 55 | 477 | 3.94e-72 | 253 |
Msa0725490 | AT2G32250.5 | 27.328 | 655 | 410 | 13 | 40 | 686 | 42 | 638 | 4.23e-69 | 246 |
Msa0725490 | AT2G32250.8 | 27.287 | 656 | 411 | 13 | 40 | 687 | 1 | 598 | 7.42e-69 | 245 |
Msa0725490 | AT2G32250.7 | 27.287 | 656 | 411 | 13 | 40 | 687 | 1 | 598 | 7.89e-69 | 245 |
Msa0725490 | AT2G32250.2 | 27.287 | 656 | 411 | 13 | 40 | 687 | 42 | 639 | 8.27e-69 | 246 |
Msa0725490 | AT2G32250.4 | 27.287 | 656 | 411 | 13 | 40 | 687 | 42 | 639 | 8.27e-69 | 246 |
Msa0725490 | AT2G32250.6 | 27.287 | 656 | 411 | 13 | 40 | 687 | 42 | 639 | 1.03e-68 | 245 |
Msa0725490 | AT2G32250.1 | 27.287 | 656 | 411 | 13 | 40 | 687 | 42 | 639 | 1.03e-68 | 245 |
Msa0725490 | AT2G32250.3 | 27.287 | 656 | 411 | 13 | 40 | 687 | 42 | 639 | 1.03e-68 | 245 |
Msa0725490 | AT4G38170.1 | 32.190 | 379 | 246 | 5 | 220 | 592 | 27 | 400 | 1.28e-67 | 236 |
Msa0725490 | AT4G19990.3 | 26.859 | 659 | 407 | 13 | 41 | 671 | 26 | 637 | 1.09e-59 | 218 |
Msa0725490 | AT4G19990.4 | 26.859 | 659 | 407 | 13 | 41 | 671 | 26 | 637 | 1.09e-59 | 218 |
Msa0725490 | AT4G19990.5 | 26.859 | 659 | 407 | 13 | 41 | 671 | 26 | 637 | 1.41e-59 | 218 |
Msa0725490 | AT4G19990.6 | 26.859 | 659 | 407 | 13 | 41 | 671 | 26 | 637 | 1.67e-59 | 218 |
Msa0725490 | AT4G19990.2 | 26.859 | 659 | 407 | 13 | 41 | 671 | 26 | 637 | 1.67e-59 | 218 |
Msa0725490 | AT4G19990.7 | 26.859 | 659 | 407 | 13 | 41 | 671 | 40 | 651 | 1.90e-59 | 218 |
Msa0725490 | AT5G28530.1 | 26.238 | 606 | 414 | 11 | 28 | 611 | 47 | 641 | 3.72e-58 | 213 |
Msa0725490 | AT5G28530.3 | 26.307 | 612 | 402 | 12 | 28 | 611 | 47 | 637 | 9.18e-58 | 211 |
Msa0725490 | AT5G28530.2 | 26.307 | 612 | 402 | 12 | 28 | 611 | 47 | 637 | 9.18e-58 | 211 |
Msa0725490 | AT1G80010.1 | 26.968 | 597 | 381 | 15 | 36 | 596 | 95 | 672 | 2.60e-57 | 211 |
Msa0725490 | AT1G52520.1 | 26.598 | 579 | 377 | 13 | 36 | 591 | 85 | 638 | 2.06e-56 | 208 |
Msa0725490 | AT4G19990.1 | 30.000 | 480 | 311 | 8 | 207 | 671 | 111 | 580 | 1.08e-52 | 197 |
Msa0725490 | AT5G28530.4 | 24.202 | 595 | 377 | 13 | 28 | 611 | 47 | 578 | 1.57e-36 | 147 |
Msa0725490 | AT5G28530.5 | 24.077 | 623 | 383 | 14 | 6 | 611 | 25 | 574 | 3.90e-36 | 146 |
Msa0725490 | AT3G59470.3 | 44.762 | 105 | 56 | 2 | 36 | 140 | 70 | 172 | 3.54e-19 | 88.6 |
Msa0725490 | AT3G59470.1 | 44.762 | 105 | 56 | 2 | 36 | 140 | 70 | 172 | 3.54e-19 | 88.6 |
Msa0725490 | AT3G59470.2 | 44.762 | 105 | 56 | 2 | 36 | 140 | 82 | 184 | 4.64e-19 | 88.6 |
Msa0725490 | AT3G07500.1 | 38.298 | 141 | 81 | 4 | 1 | 140 | 1 | 136 | 1.70e-15 | 77.0 |
Msa0725490 | AT2G43280.1 | 39.655 | 116 | 64 | 4 | 36 | 147 | 22 | 135 | 6.42e-15 | 75.1 |
Msa0725490 | AT4G12850.4 | 37.931 | 116 | 65 | 3 | 36 | 151 | 11 | 119 | 2.05e-13 | 68.9 |
Msa0725490 | AT2G43280.2 | 38.614 | 101 | 56 | 4 | 51 | 147 | 2 | 100 | 2.41e-12 | 66.6 |
Msa0725490 | AT4G12850.2 | 38.462 | 104 | 60 | 2 | 36 | 139 | 11 | 110 | 2.74e-12 | 65.5 |
Msa0725490 | AT4G12850.1 | 38.462 | 104 | 60 | 2 | 36 | 139 | 11 | 110 | 1.02e-11 | 65.1 |
Find 161 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAAATAACGAACATATTT+TGG | 0.058049 | 5_1:+25206215 | Msa0725490:CDS |
CTCTTCATCCATGGAATTCT+TGG | 0.132929 | 5_1:-25207466 | None:intergenic |
TGGAATTCCTCAAATAATTT+TGG | 0.150372 | 5_1:-25207000 | None:intergenic |
TCTTTCTTCCTTATGGCTTT+TGG | 0.185919 | 5_1:-25207570 | None:intergenic |
TCAAAATCTGAGCAGAATTT+AGG | 0.213308 | 5_1:-25206601 | None:intergenic |
CCATTCTCTTCTTCTGTGAT+TGG | 0.217199 | 5_1:-25207689 | None:intergenic |
CATGGAACTACAAATCATTT+TGG | 0.221107 | 5_1:+25207964 | Msa0725490:CDS |
CATGGAACTGCAAATCATTT+TGG | 0.222892 | 5_1:+25207904 | Msa0725490:CDS |
TTTGGTATTCGTCGGGAATA+TGG | 0.242127 | 5_1:+25205683 | Msa0725490:CDS |
TACTGTTTCCGTATCAATTT+CGG | 0.244918 | 5_1:+25207503 | Msa0725490:CDS |
ACTGTTTCCGTATCAATTTC+GGG | 0.249439 | 5_1:+25207504 | Msa0725490:CDS |
TGCGCAATCTTTCTTCCTTA+TGG | 0.249497 | 5_1:-25207577 | None:intergenic |
CAGTCATGCTTTAAAAGTTT+TGG | 0.252321 | 5_1:+25207188 | Msa0725490:CDS |
CATAATCCATGAAATGTTTC+TGG | 0.254623 | 5_1:-25206520 | None:intergenic |
CTCTCCATTTGGAGAGTAAA+TGG | 0.273511 | 5_1:-25209917 | None:intergenic |
GAAGAAGAGATTTGCGATTT+CGG | 0.282171 | 5_1:+25209738 | Msa0725490:CDS |
CTTTAGCGATTGCATTCTTT+TGG | 0.289816 | 5_1:-25206104 | None:intergenic |
TGGTTCGAAGGTAATTCTTA+TGG | 0.292735 | 5_1:-25206084 | None:intergenic |
ATAATGTTCCTGACGATTCT+TGG | 0.303754 | 5_1:+25206692 | Msa0725490:CDS |
ACATATTCATGGAAATCTTT+TGG | 0.303983 | 5_1:-25206013 | None:intergenic |
GTTGCTGCTGGTACAGCAGC+TGG | 0.314357 | 5_1:+25208525 | Msa0725490:CDS |
GAAGAAAGATTGCGCATATA+AGG | 0.315559 | 5_1:+25207584 | Msa0725490:CDS |
CCTGTTCTTGTTTCTGCTCT+AGG | 0.316546 | 5_1:-25205806 | None:intergenic |
TTGTACTCCCAATTCCTTGT+AGG | 0.323116 | 5_1:-25207936 | None:intergenic |
GCACAGATGATAAATGATTA+TGG | 0.324686 | 5_1:+25206244 | Msa0725490:CDS |
ATTTCACTTGATCGAAAGAT+TGG | 0.335890 | 5_1:+25205848 | Msa0725490:CDS |
GAGCATATAATCGGGATTAC+AGG | 0.345344 | 5_1:+25207877 | Msa0725490:CDS |
AACACCTCGATCACCCTCTT+TGG | 0.350502 | 5_1:-25205756 | None:intergenic |
ACCGCAAGCCTACAAGGAAT+TGG | 0.360047 | 5_1:+25207928 | Msa0725490:CDS |
TTCTCTACATCTTCGACTAA+TGG | 0.363229 | 5_1:-25205521 | None:intergenic |
AGGATCTGAACTCAAATTAC+AGG | 0.369426 | 5_1:+25209938 | Msa0725490:CDS |
CTTGCCTTGACACATATTCA+TGG | 0.375929 | 5_1:-25206024 | None:intergenic |
CAATCTCAAGAGCATATAAT+CGG | 0.377926 | 5_1:+25207868 | Msa0725490:CDS |
ACTATGCCAGAAACATTTCA+TGG | 0.379747 | 5_1:+25206514 | Msa0725490:CDS |
GTGTCTTGTCCACTCTTTGT+CGG | 0.382642 | 5_1:-25209660 | None:intergenic |
TTTGCAGGAACCATTAGCTT+TGG | 0.386659 | 5_1:+25207828 | Msa0725490:intron |
AAACAATTCCTTCGTTTCAA+TGG | 0.386831 | 5_1:+25206398 | Msa0725490:CDS |
CACAACATATAAGACAAATA+AGG | 0.388926 | 5_1:+25206294 | Msa0725490:CDS |
CATTTCATGGATTATGCACT+TGG | 0.390828 | 5_1:+25206527 | Msa0725490:CDS |
CCTGTAGGCTGCTCCCTCCT+TGG | 0.392802 | 5_1:+25208556 | Msa0725490:CDS |
GATATTCCTCATATTCCTCT+TGG | 0.394787 | 5_1:-25207020 | None:intergenic |
CGACCACTTGGAGTATTTGT+TGG | 0.400776 | 5_1:+25206322 | Msa0725490:CDS |
AGAATGCAATCGCTAAAGTA+TGG | 0.405923 | 5_1:+25206109 | Msa0725490:CDS |
AGTAAAGAGCGGAAAGTTAT+GGG | 0.405979 | 5_1:+25207102 | Msa0725490:CDS |
TGTTAGTGTCGCGATGGGTT+TGG | 0.412581 | 5_1:+25208581 | Msa0725490:CDS |
TACAGCAAGAAAACCGGGTT+TGG | 0.421336 | 5_1:+25205665 | Msa0725490:CDS |
TAGTAAAGAGCGGAAAGTTA+TGG | 0.423077 | 5_1:+25207101 | Msa0725490:CDS |
AACGAGTACAGCAAGAAAAC+CGG | 0.424207 | 5_1:+25205659 | Msa0725490:CDS |
GAGTTCAGATCCTCTCCATT+TGG | 0.432682 | 5_1:-25209928 | None:intergenic |
TTATATACCACAGTTAGAAA+TGG | 0.432695 | 5_1:+25205601 | Msa0725490:CDS |
CACTTTGAAAGGGTTGTCAA+TGG | 0.439872 | 5_1:+25206871 | Msa0725490:CDS |
CGCTTTAGTATATAATGCTC+TGG | 0.442507 | 5_1:-25207234 | None:intergenic |
GTTGGTGGAAAAGAAATGAT+TGG | 0.443224 | 5_1:+25206046 | Msa0725490:CDS |
TGAAATTCGTAAAAGAATGA+AGG | 0.445346 | 5_1:-25206178 | None:intergenic |
CCAAGGAGGGAGCAGCCTAC+AGG | 0.448635 | 5_1:-25208556 | None:intergenic |
CCTAGAGCAGAAACAAGAAC+AGG | 0.449488 | 5_1:+25205806 | Msa0725490:CDS |
CACATGTCAGTTGGATATGA+AGG | 0.449903 | 5_1:+25209882 | Msa0725490:intron |
GGGGAATCCTCTGGAGCAAA+AGG | 0.451336 | 5_1:+25207122 | Msa0725490:CDS |
TTACACACCAAAATTATTTG+AGG | 0.451424 | 5_1:+25206993 | Msa0725490:CDS |
TTTGGCACTGCAAGTCTACA+TGG | 0.451457 | 5_1:+25207982 | Msa0725490:CDS |
AGGCACTTGCATCCGAGTAT+TGG | 0.466235 | 5_1:+25207044 | Msa0725490:CDS |
GAACTGCAGTCCAAAGCTAA+TGG | 0.466561 | 5_1:-25207838 | None:intergenic |
AACCGGGTTTGGTATTCGTC+GGG | 0.466608 | 5_1:+25205676 | Msa0725490:CDS |
ATAAATGATTATGGATACTT+TGG | 0.469884 | 5_1:+25206253 | Msa0725490:CDS |
CCGCAAGCCTACAAGGAATT+GGG | 0.476106 | 5_1:+25207929 | Msa0725490:CDS |
CCAATCACAGAAGAAGAGAA+TGG | 0.477235 | 5_1:+25207689 | Msa0725490:CDS |
ATTGTGTTAGCTGATGAATC+TGG | 0.477279 | 5_1:+25205983 | Msa0725490:CDS |
TGCATCCGAGTATTGGAAGA+AGG | 0.480108 | 5_1:+25207051 | Msa0725490:CDS |
GGTTGGGAAGTAATCGAGAT+TGG | 0.483675 | 5_1:+25207274 | Msa0725490:CDS |
ATTGCCATTTACTCTCCAAA+TGG | 0.486410 | 5_1:+25209913 | Msa0725490:CDS |
GAAAGTTATGGGGAATCCTC+TGG | 0.491884 | 5_1:+25207113 | Msa0725490:CDS |
TGGACAAGAGATGCGAGGTT+GGG | 0.492543 | 5_1:+25207258 | Msa0725490:CDS |
CACTGATCAAGCTGCTGCAA+TGG | 0.493037 | 5_1:+25206474 | Msa0725490:CDS |
TTTGTCAATTTAACCATGCT+AGG | 0.497608 | 5_1:-25207360 | None:intergenic |
CAATCACAGAAGAAGAGAAT+GGG | 0.498067 | 5_1:+25207690 | Msa0725490:CDS |
TCCAGTTGACTCTTCATCCA+TGG | 0.500938 | 5_1:-25207475 | None:intergenic |
TTGGTTTGTTAGTGTCGCGA+TGG | 0.501079 | 5_1:+25208575 | Msa0725490:CDS |
GGAATTCCAAGAGGAATATG+AGG | 0.501575 | 5_1:+25207014 | Msa0725490:CDS |
ATGGACAAGAGATGCGAGGT+TGG | 0.505319 | 5_1:+25207257 | Msa0725490:CDS |
AGGTGGTTGACTTTATTCCT+TGG | 0.505669 | 5_1:+25205879 | Msa0725490:CDS |
GGCTGTTCAGGTGTGACAGA+TGG | 0.509494 | 5_1:+25208633 | Msa0725490:CDS |
CTTGAGCGACCTTTGTCGAC+TGG | 0.511494 | 5_1:+25209682 | Msa0725490:CDS |
ACTTCCAGCTTGTACGAGCA+TGG | 0.513664 | 5_1:-25206968 | None:intergenic |
TGGTTTGTTAGTGTCGCGAT+GGG | 0.513739 | 5_1:+25208576 | Msa0725490:CDS |
TTTGGCACCGCAAGCCTACA+AGG | 0.514611 | 5_1:+25207922 | Msa0725490:CDS |
CCCAATTCCTTGTAGGCTTG+CGG | 0.516608 | 5_1:-25207929 | None:intergenic |
TCCATGGATGAAGAGTCAAC+TGG | 0.522893 | 5_1:+25207474 | Msa0725490:CDS |
ATGCATCGATTTACATGAAG+AGG | 0.524817 | 5_1:+25206627 | Msa0725490:CDS |
CAAGGAGGGAGCAGCCTACA+GGG | 0.525102 | 5_1:-25208555 | None:intergenic |
CTTCCAGCTTGTACGAGCAT+GGG | 0.530262 | 5_1:-25206967 | None:intergenic |
TCAAGCTGCTGCAATGGCTA+AGG | 0.535099 | 5_1:+25206480 | Msa0725490:CDS |
GTATGCAGCCAAGAATCGTC+AGG | 0.537038 | 5_1:-25206700 | None:intergenic |
GTCAGTTGGATATGAAGGAA+AGG | 0.543820 | 5_1:+25209887 | Msa0725490:intron |
CTGAATTTAAATGAATATGC+AGG | 0.545628 | 5_1:+25208039 | Msa0725490:CDS |
TTCTCCACCCGAAATTGATA+CGG | 0.548115 | 5_1:-25207511 | None:intergenic |
TTTACAGCACCGACAAAGAG+TGG | 0.548670 | 5_1:+25209651 | Msa0725490:intron |
TCGCTAAAGTATGGTGAAGT+GGG | 0.548741 | 5_1:+25206118 | Msa0725490:CDS |
TCGATGGTCCAAAAGCCATA+AGG | 0.548980 | 5_1:+25207562 | Msa0725490:CDS |
TTGTTGGTCTTAATAATCAC+AGG | 0.549448 | 5_1:+25206338 | Msa0725490:CDS |
ATGTAAATCATCTGTATCAA+AGG | 0.550494 | 5_1:+25206575 | Msa0725490:CDS |
AAACCGGGTTTGGTATTCGT+CGG | 0.551560 | 5_1:+25205675 | Msa0725490:CDS |
GCCTCGGTTGAAAATGAAGA+AGG | 0.556389 | 5_1:+25206942 | Msa0725490:CDS |
CACTGAGTTATGTCCTAGCA+TGG | 0.556854 | 5_1:+25207347 | Msa0725490:CDS |
AGAAACAAGAACAGGGTGTA+CGG | 0.558156 | 5_1:+25205814 | Msa0725490:CDS |
TCAGTTGGATATGAAGGAAA+GGG | 0.558474 | 5_1:+25209888 | Msa0725490:intron |
GAGGAATATGAGGAATATCA+AGG | 0.560948 | 5_1:+25207024 | Msa0725490:CDS |
TATGTTGGCCAAGAATTCCA+TGG | 0.562334 | 5_1:+25207458 | Msa0725490:CDS |
TCAAATAACCATTGAAACGA+AGG | 0.562822 | 5_1:-25206406 | None:intergenic |
TTGCTGCTGGTACAGCAGCT+GGG | 0.567457 | 5_1:+25208526 | Msa0725490:CDS |
TTCCAGCTTGTACGAGCATG+GGG | 0.568638 | 5_1:-25206966 | None:intergenic |
GAAAGGGCAGCATATAGAGT+TGG | 0.568934 | 5_1:+25207296 | Msa0725490:CDS |
GAAGTAATCGAGATTGGAAA+GGG | 0.569679 | 5_1:+25207280 | Msa0725490:CDS |
CAAAATTGTTGAGAATATGT+TGG | 0.574044 | 5_1:+25207443 | Msa0725490:CDS |
GGAGAAATCGAAAGCAATGT+GGG | 0.581002 | 5_1:+25207528 | Msa0725490:CDS |
AATCTCAAGAGCATATAATC+GGG | 0.582277 | 5_1:+25207869 | Msa0725490:CDS |
CAGCTGGGATATGTCCCTGT+AGG | 0.585772 | 5_1:+25208541 | Msa0725490:CDS |
AGCATTATATACTAAAGCGA+TGG | 0.588853 | 5_1:+25207238 | Msa0725490:CDS |
GCATCCGAGTATTGGAAGAA+GGG | 0.591010 | 5_1:+25207052 | Msa0725490:CDS |
AATAAGGATTATCGACCACT+TGG | 0.593742 | 5_1:+25206310 | Msa0725490:CDS |
CTGAACTCAAATTACAGGGA+CGG | 0.600266 | 5_1:+25209943 | Msa0725490:CDS |
ATCGCTAAAGTATGGTGAAG+TGG | 0.605025 | 5_1:+25206117 | Msa0725490:CDS |
GGAAGTAATCGAGATTGGAA+AGG | 0.607441 | 5_1:+25207279 | Msa0725490:CDS |
AGTCAAGACATAAATTGCCT+CGG | 0.609036 | 5_1:+25206926 | Msa0725490:CDS |
CATTTACTCTCCAAATGGAG+AGG | 0.610768 | 5_1:+25209918 | Msa0725490:CDS |
TGCTCCAAAGAGGGTGATCG+AGG | 0.611493 | 5_1:+25205752 | Msa0725490:CDS |
GAGCGACCTTTGTCGACTGG+AGG | 0.611717 | 5_1:+25209685 | Msa0725490:CDS |
AGAACCCTTCTTCCAATACT+CGG | 0.611953 | 5_1:-25207056 | None:intergenic |
AAGATTTGTATGCTCCAAAG+AGG | 0.615497 | 5_1:+25205742 | Msa0725490:CDS |
TTCCCGACGAATACCAAACC+CGG | 0.616827 | 5_1:-25205678 | None:intergenic |
TCGAAAGATTGGAAAATACA+AGG | 0.618453 | 5_1:+25205859 | Msa0725490:CDS |
TGTCGTAAGTTTGAGACACA+TGG | 0.619781 | 5_1:+25207156 | Msa0725490:CDS |
TCAAACTCCATTTCTAACTG+TGG | 0.621558 | 5_1:-25205608 | None:intergenic |
ATTTCCATGAATATGTGTCA+AGG | 0.622616 | 5_1:+25206020 | Msa0725490:CDS |
CGACACTAACAAACCAAGGA+GGG | 0.624475 | 5_1:-25208569 | None:intergenic |
ACATTTCTCAAAGCAATGAG+TGG | 0.627083 | 5_1:+25206430 | Msa0725490:CDS |
AAAACTCCTCCAGTCGACAA+AGG | 0.628952 | 5_1:-25209691 | None:intergenic |
AGACCAACAAATACTCCAAG+TGG | 0.630003 | 5_1:-25206325 | None:intergenic |
TTATGGATACTTTGGTGATG+TGG | 0.632634 | 5_1:+25206261 | Msa0725490:CDS |
TTGGCACTGCAAGTCTACAT+GGG | 0.634530 | 5_1:+25207983 | Msa0725490:CDS |
ACGAGTACAGCAAGAAAACC+GGG | 0.635354 | 5_1:+25205660 | Msa0725490:CDS |
GAATATGTGTCAAGGCAAGT+TGG | 0.638062 | 5_1:+25206028 | Msa0725490:CDS |
TATGTGTCAAGGCAAGTTGG+TGG | 0.638173 | 5_1:+25206031 | Msa0725490:CDS |
TGAAGAGTGTGATTATGCCA+AGG | 0.643214 | 5_1:-25205896 | None:intergenic |
ATTATTTGAGGAATTCCAAG+AGG | 0.644848 | 5_1:+25207005 | Msa0725490:CDS |
GTGGGCACTATTGATGTCGA+TGG | 0.648055 | 5_1:+25207546 | Msa0725490:CDS |
GGATCTGAACTCAAATTACA+GGG | 0.651584 | 5_1:+25209939 | Msa0725490:CDS |
TGGAGAAATCGAAAGCAATG+TGG | 0.653559 | 5_1:+25207527 | Msa0725490:CDS |
AGATTTGTATGCTCCAAAGA+GGG | 0.656455 | 5_1:+25205743 | Msa0725490:CDS |
GTAAAGAGCGGAAAGTTATG+GGG | 0.656518 | 5_1:+25207103 | Msa0725490:CDS |
CATGGGACAGCAAATCAACA+TGG | 0.661352 | 5_1:+25208000 | Msa0725490:CDS |
ATCGGGATTACAGGTCAACA+TGG | 0.662038 | 5_1:+25207886 | Msa0725490:CDS |
ATCATGTGAACAAACTCTTG+CGG | 0.666069 | 5_1:-25205920 | None:intergenic |
ATCGCGACACTAACAAACCA+AGG | 0.667629 | 5_1:-25208573 | None:intergenic |
CTAGAGCAGAAACAAGAACA+GGG | 0.672182 | 5_1:+25205807 | Msa0725490:CDS |
ATTGGGAGTACAAGTCAACA+TGG | 0.683071 | 5_1:+25207946 | Msa0725490:CDS |
GTTTCCGTATCAATTTCGGG+TGG | 0.688459 | 5_1:+25207507 | Msa0725490:CDS |
AGCGATGGACAAGAGATGCG+AGG | 0.690254 | 5_1:+25207253 | Msa0725490:CDS |
ATTATGATGATAGTAAAGAG+CGG | 0.694906 | 5_1:+25207091 | Msa0725490:CDS |
GCGACACTAACAAACCAAGG+AGG | 0.722654 | 5_1:-25208570 | None:intergenic |
AAAGATTGGAAAATACAAGG+TGG | 0.727764 | 5_1:+25205862 | Msa0725490:CDS |
TCCAGCTTGTACGAGCATGG+GGG | 0.731406 | 5_1:-25206965 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTCTTTTACGAATTTCAAA+TGG | + | chr5_1:25206183-25206202 | Msa0725490:CDS | 20.0% |
!! | ATAAATGATTATGGATACTT+TGG | + | chr5_1:25206253-25206272 | Msa0725490:CDS | 20.0% |
!! | ATGATATACATTAAATTTGC+AGG | + | chr5_1:25207813-25207832 | Msa0725490:intron | 20.0% |
!!! | TGTATTTTAATCAAGCATAA+TGG | - | chr5_1:25209080-25209099 | None:intergenic | 20.0% |
!! | ACTACTATATTTACTAAACT+CGG | - | chr5_1:25209211-25209230 | None:intergenic | 20.0% |
! | TTATATACCACAGTTAGAAA+TGG | + | chr5_1:25205601-25205620 | Msa0725490:CDS | 25.0% |
! | GGAAATAAAAGCAAAAAAGA+TGG | + | chr5_1:25205704-25205723 | Msa0725490:CDS | 25.0% |
!! | ACATATTCATGGAAATCTTT+TGG | - | chr5_1:25206016-25206035 | None:intergenic | 25.0% |
! | TGAAATTCGTAAAAGAATGA+AGG | - | chr5_1:25206181-25206200 | None:intergenic | 25.0% |
!! | AGCAAATAACGAACATATTT+TGG | + | chr5_1:25206215-25206234 | Msa0725490:CDS | 25.0% |
!! | GCAAATAACGAACATATTTT+GGG | + | chr5_1:25206216-25206235 | Msa0725490:CDS | 25.0% |
! | CACAACATATAAGACAAATA+AGG | + | chr5_1:25206294-25206313 | Msa0725490:CDS | 25.0% |
! | ATGTAAATCATCTGTATCAA+AGG | + | chr5_1:25206575-25206594 | Msa0725490:CDS | 25.0% |
!!! | TTTTTCAAGTGAAGGAAAAA+TGG | + | chr5_1:25206725-25206744 | Msa0725490:CDS | 25.0% |
!!! | TTTTCAAGTGAAGGAAAAAT+GGG | + | chr5_1:25206726-25206745 | Msa0725490:CDS | 25.0% |
!! | AATTTTTCACTCACTTTGAA+AGG | + | chr5_1:25206860-25206879 | Msa0725490:CDS | 25.0% |
!!! | ATTTTTCACTCACTTTGAAA+GGG | + | chr5_1:25206861-25206880 | Msa0725490:CDS | 25.0% |
! | TTACACACCAAAATTATTTG+AGG | + | chr5_1:25206993-25207012 | Msa0725490:CDS | 25.0% |
!! | TGGAATTCCTCAAATAATTT+TGG | - | chr5_1:25207003-25207022 | None:intergenic | 25.0% |
! | ATTATGATGATAGTAAAGAG+CGG | + | chr5_1:25207091-25207110 | Msa0725490:CDS | 25.0% |
! | AACTTTAGACAAAAATGAGT+AGG | - | chr5_1:25207409-25207428 | None:intergenic | 25.0% |
! | CAAAATTGTTGAGAATATGT+TGG | + | chr5_1:25207443-25207462 | Msa0725490:CDS | 25.0% |
! | CTGAATTTAAATGAATATGC+AGG | + | chr5_1:25208039-25208058 | Msa0725490:CDS | 25.0% |
! | AATTTAAATGAATATGCAGG+TGG | + | chr5_1:25208042-25208061 | Msa0725490:intron | 25.0% |
!!! | ACTTTTGTCAGTCATTTTTT+GGG | + | chr5_1:25208214-25208233 | Msa0725490:intron | 25.0% |
! | TACTAGATTAAATGATGTAC+TGG | + | chr5_1:25208278-25208297 | Msa0725490:intron | 25.0% |
!! | CAATTTTGCAATTGAGTATA+AGG | - | chr5_1:25208779-25208798 | None:intergenic | 25.0% |
! | ATAAAAGAATACACCTAAAG+CGG | - | chr5_1:25208913-25208932 | None:intergenic | 25.0% |
! | GTTGAATTGTAATAAGCATA+TGG | - | chr5_1:25209167-25209186 | None:intergenic | 25.0% |
! | ATACAATTATAGTGAAAGCA+AGG | - | chr5_1:25209270-25209289 | None:intergenic | 25.0% |
! | ATTGTAATAGCTGTTTAACA+AGG | - | chr5_1:25209309-25209328 | None:intergenic | 25.0% |
!! | TTTTCTCTATTTTGCTTTGT+GGG | - | chr5_1:25209506-25209525 | None:intergenic | 25.0% |
!! | TTTTTCTCTATTTTGCTTTG+TGG | - | chr5_1:25209507-25209526 | None:intergenic | 25.0% |
! | AGCAAAATAGAGAAAAATTG+AGG | + | chr5_1:25209510-25209529 | Msa0725490:intron | 25.0% |
! | GCAAAATAGAGAAAAATTGA+GGG | + | chr5_1:25209511-25209530 | Msa0725490:intron | 25.0% |
! | TGTGGATAAATGAAAATCAA+TGG | - | chr5_1:25209866-25209885 | None:intergenic | 25.0% |
CAATATCCAAAAAGACATTG+TGG | + | chr5_1:25205553-25205572 | Msa0725490:CDS | 30.0% | |
ATTTCACTTGATCGAAAGAT+TGG | + | chr5_1:25205848-25205867 | Msa0725490:CDS | 30.0% | |
TCGAAAGATTGGAAAATACA+AGG | + | chr5_1:25205859-25205878 | Msa0725490:CDS | 30.0% | |
AAAGATTGGAAAATACAAGG+TGG | + | chr5_1:25205862-25205881 | Msa0725490:CDS | 30.0% | |
ATTTCCATGAATATGTGTCA+AGG | + | chr5_1:25206020-25206039 | Msa0725490:CDS | 30.0% | |
GCACAGATGATAAATGATTA+TGG | + | chr5_1:25206244-25206263 | Msa0725490:CDS | 30.0% | |
!! | TTGTTGGTCTTAATAATCAC+AGG | + | chr5_1:25206338-25206357 | Msa0725490:CDS | 30.0% |
AAACAATTCCTTCGTTTCAA+TGG | + | chr5_1:25206398-25206417 | Msa0725490:CDS | 30.0% | |
TCAAATAACCATTGAAACGA+AGG | - | chr5_1:25206409-25206428 | None:intergenic | 30.0% | |
! | TGATCAGTGAGAATTGTTTT+AGG | - | chr5_1:25206463-25206482 | None:intergenic | 30.0% |
CATAATCCATGAAATGTTTC+TGG | - | chr5_1:25206523-25206542 | None:intergenic | 30.0% | |
TCAAAATCTGAGCAGAATTT+AGG | - | chr5_1:25206604-25206623 | None:intergenic | 30.0% | |
!!! | GCATACAATTTTTCAAGTGA+AGG | + | chr5_1:25206717-25206736 | Msa0725490:CDS | 30.0% |
ATTATTTGAGGAATTCCAAG+AGG | + | chr5_1:25207005-25207024 | Msa0725490:CDS | 30.0% | |
!!! | CAGTCATGCTTTAAAAGTTT+TGG | + | chr5_1:25207188-25207207 | Msa0725490:CDS | 30.0% |
AGCATTATATACTAAAGCGA+TGG | + | chr5_1:25207238-25207257 | Msa0725490:CDS | 30.0% | |
TTTGTCAATTTAACCATGCT+AGG | - | chr5_1:25207363-25207382 | None:intergenic | 30.0% | |
TACTGTTTCCGTATCAATTT+CGG | + | chr5_1:25207503-25207522 | Msa0725490:CDS | 30.0% | |
ATCACAGAGAAAAAGTTCAA+TGG | + | chr5_1:25207719-25207738 | Msa0725490:CDS | 30.0% | |
! | CAATCTCAAGAGCATATAAT+CGG | + | chr5_1:25207868-25207887 | Msa0725490:CDS | 30.0% |
! | AATCTCAAGAGCATATAATC+GGG | + | chr5_1:25207869-25207888 | Msa0725490:CDS | 30.0% |
! | CATGGAACTACAAATCATTT+TGG | + | chr5_1:25207964-25207983 | Msa0725490:CDS | 30.0% |
CAAACCAAGTTAACACTTTA+GGG | + | chr5_1:25208100-25208119 | Msa0725490:intron | 30.0% | |
!!! | GACTTTTGTCAGTCATTTTT+TGG | + | chr5_1:25208213-25208232 | Msa0725490:intron | 30.0% |
!!! | CTTTTGTCAGTCATTTTTTG+GGG | + | chr5_1:25208215-25208234 | Msa0725490:intron | 30.0% |
!!! | TTTTGTCAGTCATTTTTTGG+GGG | + | chr5_1:25208216-25208235 | Msa0725490:intron | 30.0% |
AGATGTTTCACATCAACAAA+TGG | - | chr5_1:25208310-25208329 | None:intergenic | 30.0% | |
!!! | GTTGTTTTAAAGCATTTCAG+AGG | + | chr5_1:25208330-25208349 | Msa0725490:intron | 30.0% |
! | TATTTCTGCTGTCAAATTTC+TGG | + | chr5_1:25208375-25208394 | Msa0725490:intron | 30.0% |
!!! | GTTAATTTTTGGGACTGTTT+TGG | + | chr5_1:25208485-25208504 | Msa0725490:CDS | 30.0% |
TTGTATATGTTTGTCAAACC+CGG | - | chr5_1:25208747-25208766 | None:intergenic | 30.0% | |
!!! | TTTGTTCATCCGGTTTTATT+CGG | + | chr5_1:25208865-25208884 | Msa0725490:intron | 30.0% |
TTAGTACAATTCACACAACA+GGG | + | chr5_1:25208970-25208989 | Msa0725490:intron | 30.0% | |
TATTTACTAAACTCGGAGAA+AGG | - | chr5_1:25209204-25209223 | None:intergenic | 30.0% | |
GATGTAACAGTTGTTTAATG+AGG | - | chr5_1:25209397-25209416 | None:intergenic | 30.0% | |
AAATAGAGAAAAATTGAGGG+AGG | + | chr5_1:25209514-25209533 | Msa0725490:intron | 30.0% | |
AATAGAGAAAAATTGAGGGA+GGG | + | chr5_1:25209515-25209534 | Msa0725490:intron | 30.0% | |
AACGAGAGACAAAATAACAA+TGG | + | chr5_1:25209542-25209561 | Msa0725490:intron | 30.0% | |
TTCTCTACATCTTCGACTAA+TGG | - | chr5_1:25205524-25205543 | None:intergenic | 35.0% | |
! | CATGTTCCACAATGTCTTTT+TGG | - | chr5_1:25205562-25205581 | None:intergenic | 35.0% |
CAAAAAGACATTGTGGAACA+TGG | + | chr5_1:25205560-25205579 | Msa0725490:CDS | 35.0% | |
TCAAACTCCATTTCTAACTG+TGG | - | chr5_1:25205611-25205630 | None:intergenic | 35.0% | |
AAGATTTGTATGCTCCAAAG+AGG | + | chr5_1:25205742-25205761 | Msa0725490:CDS | 35.0% | |
AGATTTGTATGCTCCAAAGA+GGG | + | chr5_1:25205743-25205762 | Msa0725490:CDS | 35.0% | |
ATCATGTGAACAAACTCTTG+CGG | - | chr5_1:25205923-25205942 | None:intergenic | 35.0% | |
ATTGTGTTAGCTGATGAATC+TGG | + | chr5_1:25205983-25206002 | Msa0725490:CDS | 35.0% | |
! | GTTGGTGGAAAAGAAATGAT+TGG | + | chr5_1:25206046-25206065 | Msa0725490:CDS | 35.0% |
TGGTTCGAAGGTAATTCTTA+TGG | - | chr5_1:25206087-25206106 | None:intergenic | 35.0% | |
!!! | ATTGCATTCTTTTGGTTCGA+AGG | - | chr5_1:25206099-25206118 | None:intergenic | 35.0% |
! | CTTTAGCGATTGCATTCTTT+TGG | - | chr5_1:25206107-25206126 | None:intergenic | 35.0% |
AGAATGCAATCGCTAAAGTA+TGG | + | chr5_1:25206109-25206128 | Msa0725490:CDS | 35.0% | |
!! | TTATGGATACTTTGGTGATG+TGG | + | chr5_1:25206261-25206280 | Msa0725490:CDS | 35.0% |
AATAAGGATTATCGACCACT+TGG | + | chr5_1:25206310-25206329 | Msa0725490:CDS | 35.0% | |
ACATTTCTCAAAGCAATGAG+TGG | + | chr5_1:25206430-25206449 | Msa0725490:CDS | 35.0% | |
ACTATGCCAGAAACATTTCA+TGG | + | chr5_1:25206514-25206533 | Msa0725490:CDS | 35.0% | |
! | CATTTCATGGATTATGCACT+TGG | + | chr5_1:25206527-25206546 | Msa0725490:CDS | 35.0% |
!! | ATGCATCGATTTACATGAAG+AGG | + | chr5_1:25206627-25206646 | Msa0725490:CDS | 35.0% |
!!! | AAAGTGAGTTTTTGAGTGCA+TGG | + | chr5_1:25206650-25206669 | Msa0725490:CDS | 35.0% |
!!! | AAGTGAGTTTTTGAGTGCAT+GGG | + | chr5_1:25206651-25206670 | Msa0725490:CDS | 35.0% |
ATAATGTTCCTGACGATTCT+TGG | + | chr5_1:25206692-25206711 | Msa0725490:CDS | 35.0% | |
AGTCAAGACATAAATTGCCT+CGG | + | chr5_1:25206926-25206945 | Msa0725490:CDS | 35.0% | |
GATATTCCTCATATTCCTCT+TGG | - | chr5_1:25207023-25207042 | None:intergenic | 35.0% | |
GAGGAATATGAGGAATATCA+AGG | + | chr5_1:25207024-25207043 | Msa0725490:CDS | 35.0% | |
TAGTAAAGAGCGGAAAGTTA+TGG | + | chr5_1:25207101-25207120 | Msa0725490:CDS | 35.0% | |
AGTAAAGAGCGGAAAGTTAT+GGG | + | chr5_1:25207102-25207121 | Msa0725490:CDS | 35.0% | |
CGCTTTAGTATATAATGCTC+TGG | - | chr5_1:25207237-25207256 | None:intergenic | 35.0% | |
GAAGTAATCGAGATTGGAAA+GGG | + | chr5_1:25207280-25207299 | Msa0725490:CDS | 35.0% | |
ACTGTTTCCGTATCAATTTC+GGG | + | chr5_1:25207504-25207523 | Msa0725490:CDS | 35.0% | |
! | TCTTTCTTCCTTATGGCTTT+TGG | - | chr5_1:25207573-25207592 | None:intergenic | 35.0% |
GAAGAAAGATTGCGCATATA+AGG | + | chr5_1:25207584-25207603 | Msa0725490:CDS | 35.0% | |
!!! | ATTTTTTCAACCCAAGTCAG+GGG | - | chr5_1:25207621-25207640 | None:intergenic | 35.0% |
!!! | CATTTTTTCAACCCAAGTCA+GGG | - | chr5_1:25207622-25207641 | None:intergenic | 35.0% |
ACAGCCACAGAAAAAGAAAA+AGG | + | chr5_1:25207662-25207681 | Msa0725490:CDS | 35.0% | |
CAGCCACAGAAAAAGAAAAA+GGG | + | chr5_1:25207663-25207682 | Msa0725490:CDS | 35.0% | |
! | TCTCCCTTTTTCTTTTTCTG+TGG | - | chr5_1:25207669-25207688 | None:intergenic | 35.0% |
CAATCACAGAAGAAGAGAAT+GGG | + | chr5_1:25207690-25207709 | Msa0725490:CDS | 35.0% | |
! | CATGGAACTGCAAATCATTT+TGG | + | chr5_1:25207904-25207923 | Msa0725490:CDS | 35.0% |
GCAAACCAAGTTAACACTTT+AGG | + | chr5_1:25208099-25208118 | Msa0725490:intron | 35.0% | |
! | ACATCCCTAAAGTGTTAACT+TGG | - | chr5_1:25208107-25208126 | None:intergenic | 35.0% |
AAAAATTAACAGACCAGCTG+CGG | - | chr5_1:25208475-25208494 | None:intergenic | 35.0% | |
!! | CAGCTGGTCTGTTAATTTTT+GGG | + | chr5_1:25208475-25208494 | Msa0725490:intron | 35.0% |
AAGGCAAAGATACAACAAAC+AGG | - | chr5_1:25208704-25208723 | None:intergenic | 35.0% | |
!!! | CATTGATTTTCCATTACGCT+TGG | + | chr5_1:25208842-25208861 | Msa0725490:intron | 35.0% |
!!! | TTGTTCATCCGGTTTTATTC+GGG | + | chr5_1:25208866-25208885 | Msa0725490:intron | 35.0% |
GTTAGTACAATTCACACAAC+AGG | + | chr5_1:25208969-25208988 | Msa0725490:intron | 35.0% | |
TGTTGTGTGAATTGTACTGT+TGG | - | chr5_1:25209019-25209038 | None:intergenic | 35.0% | |
!! | CAGTTCAATAGTCTTATGCT+TGG | + | chr5_1:25209127-25209146 | Msa0725490:intron | 35.0% |
AAGGCAAGTGTATTGAAGAA+AGG | - | chr5_1:25209251-25209270 | None:intergenic | 35.0% | |
ATGGGGATTGGGATAAATTT+GGG | - | chr5_1:25209469-25209488 | None:intergenic | 35.0% | |
AATGGGGATTGGGATAAATT+TGG | - | chr5_1:25209470-25209489 | None:intergenic | 35.0% | |
TGGGTTATTGCTGTGATAAT+GGG | - | chr5_1:25209487-25209506 | None:intergenic | 35.0% | |
GAAGAAGAGATTTGCGATTT+CGG | + | chr5_1:25209738-25209757 | Msa0725490:CDS | 35.0% | |
AGAAAAGTCGTATACGAAGA+TGG | + | chr5_1:25209766-25209785 | Msa0725490:intron | 35.0% | |
GAAAAGTCGTATACGAAGAT+GGG | + | chr5_1:25209767-25209786 | Msa0725490:intron | 35.0% | |
TCATTTATCCACATGTCAGT+TGG | + | chr5_1:25209873-25209892 | Msa0725490:intron | 35.0% | |
TCAGTTGGATATGAAGGAAA+GGG | + | chr5_1:25209888-25209907 | Msa0725490:intron | 35.0% | |
! | ATTGCCATTTACTCTCCAAA+TGG | + | chr5_1:25209913-25209932 | Msa0725490:CDS | 35.0% |
AGGATCTGAACTCAAATTAC+AGG | + | chr5_1:25209938-25209957 | Msa0725490:CDS | 35.0% | |
GGATCTGAACTCAAATTACA+GGG | + | chr5_1:25209939-25209958 | Msa0725490:CDS | 35.0% | |
AACGAGTACAGCAAGAAAAC+CGG | + | chr5_1:25205659-25205678 | Msa0725490:CDS | 40.0% | |
TTTGGTATTCGTCGGGAATA+TGG | + | chr5_1:25205683-25205702 | Msa0725490:CDS | 40.0% | |
CTAGAGCAGAAACAAGAACA+GGG | + | chr5_1:25205807-25205826 | Msa0725490:CDS | 40.0% | |
AGAAACAAGAACAGGGTGTA+CGG | + | chr5_1:25205814-25205833 | Msa0725490:CDS | 40.0% | |
! | AGGTGGTTGACTTTATTCCT+TGG | + | chr5_1:25205879-25205898 | Msa0725490:CDS | 40.0% |
! | TGAAGAGTGTGATTATGCCA+AGG | - | chr5_1:25205899-25205918 | None:intergenic | 40.0% |
CTTGCCTTGACACATATTCA+TGG | - | chr5_1:25206027-25206046 | None:intergenic | 40.0% | |
GAATATGTGTCAAGGCAAGT+TGG | + | chr5_1:25206028-25206047 | Msa0725490:CDS | 40.0% | |
ATCGCTAAAGTATGGTGAAG+TGG | + | chr5_1:25206117-25206136 | Msa0725490:CDS | 40.0% | |
TCGCTAAAGTATGGTGAAGT+GGG | + | chr5_1:25206118-25206137 | Msa0725490:CDS | 40.0% | |
AGACCAACAAATACTCCAAG+TGG | - | chr5_1:25206328-25206347 | None:intergenic | 40.0% | |
!!! | ACAGGCAGACTGTTGTTTTT+GGG | + | chr5_1:25206356-25206375 | Msa0725490:CDS | 40.0% |
AAGTGAAGGAAAAATGGGCA+TGG | + | chr5_1:25206731-25206750 | Msa0725490:CDS | 40.0% | |
AGTGAAGGAAAAATGGGCAT+GGG | + | chr5_1:25206732-25206751 | Msa0725490:CDS | 40.0% | |
GTTCGAAAAACTTTCACTGC+TGG | + | chr5_1:25206760-25206779 | Msa0725490:CDS | 40.0% | |
! | CACTTTGAAAGGGTTGTCAA+TGG | + | chr5_1:25206871-25206890 | Msa0725490:CDS | 40.0% |
GGAATTCCAAGAGGAATATG+AGG | + | chr5_1:25207014-25207033 | Msa0725490:CDS | 40.0% | |
AGAACCCTTCTTCCAATACT+CGG | - | chr5_1:25207059-25207078 | None:intergenic | 40.0% | |
GTAAAGAGCGGAAAGTTATG+GGG | + | chr5_1:25207103-25207122 | Msa0725490:CDS | 40.0% | |
! | TGTCGTAAGTTTGAGACACA+TGG | + | chr5_1:25207156-25207175 | Msa0725490:CDS | 40.0% |
GGAAGTAATCGAGATTGGAA+AGG | + | chr5_1:25207279-25207298 | Msa0725490:CDS | 40.0% | |
TATGTTGGCCAAGAATTCCA+TGG | + | chr5_1:25207458-25207477 | Msa0725490:CDS | 40.0% | |
CTCTTCATCCATGGAATTCT+TGG | - | chr5_1:25207469-25207488 | None:intergenic | 40.0% | |
TTCTCCACCCGAAATTGATA+CGG | - | chr5_1:25207514-25207533 | None:intergenic | 40.0% | |
TGGAGAAATCGAAAGCAATG+TGG | + | chr5_1:25207527-25207546 | Msa0725490:CDS | 40.0% | |
GGAGAAATCGAAAGCAATGT+GGG | + | chr5_1:25207528-25207547 | Msa0725490:CDS | 40.0% | |
TGCGCAATCTTTCTTCCTTA+TGG | - | chr5_1:25207580-25207599 | None:intergenic | 40.0% | |
TAAAAAACGACCCCTGACTT+GGG | + | chr5_1:25207608-25207627 | Msa0725490:CDS | 40.0% | |
!!! | CCATTTTTTCAACCCAAGTC+AGG | - | chr5_1:25207623-25207642 | None:intergenic | 40.0% |
!! | CCTGACTTGGGTTGAAAAAA+TGG | + | chr5_1:25207620-25207639 | Msa0725490:CDS | 40.0% |
CCATTCTCTTCTTCTGTGAT+TGG | - | chr5_1:25207692-25207711 | None:intergenic | 40.0% | |
CCAATCACAGAAGAAGAGAA+TGG | + | chr5_1:25207689-25207708 | Msa0725490:CDS | 40.0% | |
! | TTTGCAGGAACCATTAGCTT+TGG | + | chr5_1:25207828-25207847 | Msa0725490:intron | 40.0% |
GAGCATATAATCGGGATTAC+AGG | + | chr5_1:25207877-25207896 | Msa0725490:CDS | 40.0% | |
TTGTACTCCCAATTCCTTGT+AGG | - | chr5_1:25207939-25207958 | None:intergenic | 40.0% | |
! | ATTGGGAGTACAAGTCAACA+TGG | + | chr5_1:25207946-25207965 | Msa0725490:CDS | 40.0% |
!!! | GTCATAATTTTTTCCGCAGC+TGG | + | chr5_1:25208459-25208478 | Msa0725490:intron | 40.0% |
!! | GCAGCTGGTCTGTTAATTTT+TGG | + | chr5_1:25208474-25208493 | Msa0725490:intron | 40.0% |
!!! | TTTGGTTTTAGGGGCTTGTT+CGG | + | chr5_1:25208599-25208618 | Msa0725490:CDS | 40.0% |
!!! | GCTTGTTCGGCTTTGTTTTT+GGG | + | chr5_1:25208612-25208631 | Msa0725490:CDS | 40.0% |
GATGAACAAACCAAGCGTAA+TGG | - | chr5_1:25208855-25208874 | None:intergenic | 40.0% | |
!! | TTACGCTTGGTTTGTTCATC+CGG | + | chr5_1:25208855-25208874 | Msa0725490:intron | 40.0% |
CTTGATGCAAGATGACTCAA+TGG | - | chr5_1:25209343-25209362 | None:intergenic | 40.0% | |
TGTTACATCAGTACAGCAAG+TGG | + | chr5_1:25209408-25209427 | Msa0725490:intron | 40.0% | |
!! | TTGCTGTGATAATGGGGATT+GGG | - | chr5_1:25209480-25209499 | None:intergenic | 40.0% |
!! | ATTGCTGTGATAATGGGGAT+TGG | - | chr5_1:25209481-25209500 | None:intergenic | 40.0% |
! | GGGTTATTGCTGTGATAATG+GGG | - | chr5_1:25209486-25209505 | None:intergenic | 40.0% |
! | GTGGGTTATTGCTGTGATAA+TGG | - | chr5_1:25209488-25209507 | None:intergenic | 40.0% |
TCTGGGTTTACAACTAGTGT+GGG | - | chr5_1:25209578-25209597 | None:intergenic | 40.0% | |
ATCTGGGTTTACAACTAGTG+TGG | - | chr5_1:25209579-25209598 | None:intergenic | 40.0% | |
GTGTTCGTGATTGTTAATCG+CGG | - | chr5_1:25209620-25209639 | None:intergenic | 40.0% | |
ATTAACAATCACGAACACCG+TGG | + | chr5_1:25209622-25209641 | Msa0725490:intron | 40.0% | |
TATACGAAGATGGGAGAAGA+AGG | + | chr5_1:25209776-25209795 | Msa0725490:intron | 40.0% | |
ATACGAAGATGGGAGAAGAA+GGG | + | chr5_1:25209777-25209796 | Msa0725490:intron | 40.0% | |
CTTCATATCCAACTGACATG+TGG | - | chr5_1:25209884-25209903 | None:intergenic | 40.0% | |
CACATGTCAGTTGGATATGA+AGG | + | chr5_1:25209882-25209901 | Msa0725490:intron | 40.0% | |
GTCAGTTGGATATGAAGGAA+AGG | + | chr5_1:25209887-25209906 | Msa0725490:intron | 40.0% | |
CTCTCCATTTGGAGAGTAAA+TGG | - | chr5_1:25209920-25209939 | None:intergenic | 40.0% | |
CATTTACTCTCCAAATGGAG+AGG | + | chr5_1:25209918-25209937 | Msa0725490:CDS | 40.0% | |
CTGAACTCAAATTACAGGGA+CGG | + | chr5_1:25209943-25209962 | Msa0725490:CDS | 40.0% | |
ACGAGTACAGCAAGAAAACC+GGG | + | chr5_1:25205660-25205679 | Msa0725490:CDS | 45.0% | |
TACAGCAAGAAAACCGGGTT+TGG | + | chr5_1:25205665-25205684 | Msa0725490:CDS | 45.0% | |
! | AAACCGGGTTTGGTATTCGT+CGG | + | chr5_1:25205675-25205694 | Msa0725490:CDS | 45.0% |
!! | CCTGTTCTTGTTTCTGCTCT+AGG | - | chr5_1:25205809-25205828 | None:intergenic | 45.0% |
CCTAGAGCAGAAACAAGAAC+AGG | + | chr5_1:25205806-25205825 | Msa0725490:CDS | 45.0% | |
! | TATGTGTCAAGGCAAGTTGG+TGG | + | chr5_1:25206031-25206050 | Msa0725490:CDS | 45.0% |
! | CGACCACTTGGAGTATTTGT+TGG | + | chr5_1:25206322-25206341 | Msa0725490:CDS | 45.0% |
!!! | CACAGGCAGACTGTTGTTTT+TGG | + | chr5_1:25206355-25206374 | Msa0725490:CDS | 45.0% |
!!! | CAGGCAGACTGTTGTTTTTG+GGG | + | chr5_1:25206357-25206376 | Msa0725490:CDS | 45.0% |
!!! | GAGTTTTTGAGTGCATGGGA+TGG | + | chr5_1:25206655-25206674 | Msa0725490:CDS | 45.0% |
GCCTCGGTTGAAAATGAAGA+AGG | + | chr5_1:25206942-25206961 | Msa0725490:CDS | 45.0% | |
! | GCCTTCTTCATTTTCAACCG+AGG | - | chr5_1:25206946-25206965 | None:intergenic | 45.0% |
!! | TGCATCCGAGTATTGGAAGA+AGG | + | chr5_1:25207051-25207070 | Msa0725490:CDS | 45.0% |
!! | GCATCCGAGTATTGGAAGAA+GGG | + | chr5_1:25207052-25207071 | Msa0725490:CDS | 45.0% |
GAAAGTTATGGGGAATCCTC+TGG | + | chr5_1:25207113-25207132 | Msa0725490:CDS | 45.0% | |
! | CAAGAAACCTTTTGCTCCAG+AGG | - | chr5_1:25207132-25207151 | None:intergenic | 45.0% |
GGTTGGGAAGTAATCGAGAT+TGG | + | chr5_1:25207274-25207293 | Msa0725490:CDS | 45.0% | |
GAAAGGGCAGCATATAGAGT+TGG | + | chr5_1:25207296-25207315 | Msa0725490:CDS | 45.0% | |
CACTGAGTTATGTCCTAGCA+TGG | + | chr5_1:25207347-25207366 | Msa0725490:CDS | 45.0% | |
TCCATGGATGAAGAGTCAAC+TGG | + | chr5_1:25207474-25207493 | Msa0725490:CDS | 45.0% | |
! | TCCAGTTGACTCTTCATCCA+TGG | - | chr5_1:25207478-25207497 | None:intergenic | 45.0% |
GTTTCCGTATCAATTTCGGG+TGG | + | chr5_1:25207507-25207526 | Msa0725490:CDS | 45.0% | |
TCGATGGTCCAAAAGCCATA+AGG | + | chr5_1:25207562-25207581 | Msa0725490:CDS | 45.0% | |
CTAAAAAACGACCCCTGACT+TGG | + | chr5_1:25207607-25207626 | Msa0725490:CDS | 45.0% | |
GAACTGCAGTCCAAAGCTAA+TGG | - | chr5_1:25207841-25207860 | None:intergenic | 45.0% | |
ATCGGGATTACAGGTCAACA+TGG | + | chr5_1:25207886-25207905 | Msa0725490:CDS | 45.0% | |
TTTGGCACTGCAAGTCTACA+TGG | + | chr5_1:25207982-25208001 | Msa0725490:CDS | 45.0% | |
TTGGCACTGCAAGTCTACAT+GGG | + | chr5_1:25207983-25208002 | Msa0725490:CDS | 45.0% | |
CATGGGACAGCAAATCAACA+TGG | + | chr5_1:25208000-25208019 | Msa0725490:CDS | 45.0% | |
!!! | GACTGTTTTGGCGTCAGTTT+TGG | + | chr5_1:25208497-25208516 | Msa0725490:CDS | 45.0% |
CGACACTAACAAACCAAGGA+GGG | - | chr5_1:25208572-25208591 | None:intergenic | 45.0% | |
ATCGCGACACTAACAAACCA+AGG | - | chr5_1:25208576-25208595 | None:intergenic | 45.0% | |
!! | TTGGTTTGTTAGTGTCGCGA+TGG | + | chr5_1:25208575-25208594 | Msa0725490:CDS | 45.0% |
!! | TGGTTTGTTAGTGTCGCGAT+GGG | + | chr5_1:25208576-25208595 | Msa0725490:CDS | 45.0% |
!!! | TCGCGATGGGTTTGGTTTTA+GGG | + | chr5_1:25208589-25208608 | Msa0725490:CDS | 45.0% |
!!! | GGCTTGTTCGGCTTTGTTTT+TGG | + | chr5_1:25208611-25208630 | Msa0725490:CDS | 45.0% |
!!! | GCTTTGTTTTTGGGCTGTTC+AGG | + | chr5_1:25208621-25208640 | Msa0725490:CDS | 45.0% |
!! | TGGTGTTGCAGCTTCTGTTT+CGG | + | chr5_1:25208678-25208697 | Msa0725490:intron | 45.0% |
ACAAGGCGTGTTAAATGGGA+AGG | - | chr5_1:25208723-25208742 | None:intergenic | 45.0% | |
GCGATATGCCCGAATAAAAC+CGG | - | chr5_1:25208877-25208896 | None:intergenic | 45.0% | |
TAGCATTTGTGCGTCTTGAG+CGG | + | chr5_1:25208940-25208959 | Msa0725490:intron | 45.0% | |
GTAGAAGAACAGGTCGATCT+GGG | - | chr5_1:25209595-25209614 | None:intergenic | 45.0% | |
AGTAGAAGAACAGGTCGATC+TGG | - | chr5_1:25209596-25209615 | None:intergenic | 45.0% | |
! | GGTGCTGTAAAACTCAACCA+CGG | - | chr5_1:25209642-25209661 | None:intergenic | 45.0% |
!! | TTTACAGCACCGACAAAGAG+TGG | + | chr5_1:25209651-25209670 | Msa0725490:intron | 45.0% |
GTGTCTTGTCCACTCTTTGT+CGG | - | chr5_1:25209663-25209682 | None:intergenic | 45.0% | |
AAAACTCCTCCAGTCGACAA+AGG | - | chr5_1:25209694-25209713 | None:intergenic | 45.0% | |
! | GGAGGAGTTTTGCAGAAGAA+AGG | + | chr5_1:25209703-25209722 | Msa0725490:CDS | 45.0% |
GAGTTCAGATCCTCTCCATT+TGG | - | chr5_1:25209931-25209950 | None:intergenic | 45.0% | |
! | AACCGGGTTTGGTATTCGTC+GGG | + | chr5_1:25205676-25205695 | Msa0725490:CDS | 50.0% |
TTCCCGACGAATACCAAACC+CGG | - | chr5_1:25205681-25205700 | None:intergenic | 50.0% | |
AACACCTCGATCACCCTCTT+TGG | - | chr5_1:25205759-25205778 | None:intergenic | 50.0% | |
CACTGATCAAGCTGCTGCAA+TGG | + | chr5_1:25206474-25206493 | Msa0725490:CDS | 50.0% | |
TCAAGCTGCTGCAATGGCTA+AGG | + | chr5_1:25206480-25206499 | Msa0725490:CDS | 50.0% | |
GTATGCAGCCAAGAATCGTC+AGG | - | chr5_1:25206703-25206722 | None:intergenic | 50.0% | |
TTCCAGCTTGTACGAGCATG+GGG | - | chr5_1:25206969-25206988 | None:intergenic | 50.0% | |
CTTCCAGCTTGTACGAGCAT+GGG | - | chr5_1:25206970-25206989 | None:intergenic | 50.0% | |
ACTTCCAGCTTGTACGAGCA+TGG | - | chr5_1:25206971-25206990 | None:intergenic | 50.0% | |
AGGCACTTGCATCCGAGTAT+TGG | + | chr5_1:25207044-25207063 | Msa0725490:CDS | 50.0% | |
ATGGACAAGAGATGCGAGGT+TGG | + | chr5_1:25207257-25207276 | Msa0725490:CDS | 50.0% | |
TGGACAAGAGATGCGAGGTT+GGG | + | chr5_1:25207258-25207277 | Msa0725490:CDS | 50.0% | |
GTGGGCACTATTGATGTCGA+TGG | + | chr5_1:25207546-25207565 | Msa0725490:CDS | 50.0% | |
ACCGCAAGCCTACAAGGAAT+TGG | + | chr5_1:25207928-25207947 | Msa0725490:CDS | 50.0% | |
CCCAATTCCTTGTAGGCTTG+CGG | - | chr5_1:25207932-25207951 | None:intergenic | 50.0% | |
CCGCAAGCCTACAAGGAATT+GGG | + | chr5_1:25207929-25207948 | Msa0725490:CDS | 50.0% | |
!! | TTTGGCGTCAGTTTTGGTGC+TGG | + | chr5_1:25208503-25208522 | Msa0725490:CDS | 50.0% |
GCGACACTAACAAACCAAGG+AGG | - | chr5_1:25208573-25208592 | None:intergenic | 50.0% | |
! | TGTTAGTGTCGCGATGGGTT+TGG | + | chr5_1:25208581-25208600 | Msa0725490:CDS | 50.0% |
!!! | GTCGCGATGGGTTTGGTTTT+AGG | + | chr5_1:25208588-25208607 | Msa0725490:CDS | 50.0% |
!!! | CGCGATGGGTTTGGTTTTAG+GGG | + | chr5_1:25208590-25208609 | Msa0725490:CDS | 50.0% |
CGGCACAAGGCGTGTTAAAT+GGG | - | chr5_1:25208727-25208746 | None:intergenic | 50.0% | |
CCATTTAACACGCCTTGTGC+CGG | + | chr5_1:25208725-25208744 | Msa0725490:intron | 50.0% | |
CATTTAACACGCCTTGTGCC+GGG | + | chr5_1:25208726-25208745 | Msa0725490:intron | 50.0% | |
TGTTTGTCAAACCCGGCACA+AGG | - | chr5_1:25208740-25208759 | None:intergenic | 50.0% | |
AATCGCGGCAGTAGAAGAAC+AGG | - | chr5_1:25209605-25209624 | None:intergenic | 50.0% | |
TGCTCCAAAGAGGGTGATCG+AGG | + | chr5_1:25205752-25205771 | Msa0725490:CDS | 55.0% | |
TCCAGCTTGTACGAGCATGG+GGG | - | chr5_1:25206968-25206987 | None:intergenic | 55.0% | |
!! | GGGGAATCCTCTGGAGCAAA+AGG | + | chr5_1:25207122-25207141 | Msa0725490:CDS | 55.0% |
AGCGATGGACAAGAGATGCG+AGG | + | chr5_1:25207253-25207272 | Msa0725490:CDS | 55.0% | |
TTTGGCACCGCAAGCCTACA+AGG | + | chr5_1:25207922-25207941 | Msa0725490:CDS | 55.0% | |
!!! | GTTTTGGTGCTGGTTGCTGC+TGG | + | chr5_1:25208513-25208532 | Msa0725490:CDS | 55.0% |
TTGCTGCTGGTACAGCAGCT+GGG | + | chr5_1:25208526-25208545 | Msa0725490:CDS | 55.0% | |
CAGCTGGGATATGTCCCTGT+AGG | + | chr5_1:25208541-25208560 | Msa0725490:CDS | 55.0% | |
GGCTGTTCAGGTGTGACAGA+TGG | + | chr5_1:25208633-25208652 | Msa0725490:CDS | 55.0% | |
GCATGACAGCAGCTGTAAGC+TGG | + | chr5_1:25208658-25208677 | Msa0725490:intron | 55.0% | |
CCGGCACAAGGCGTGTTAAA+TGG | - | chr5_1:25208728-25208747 | None:intergenic | 55.0% | |
TCGGGCATATCGCCTGTAAG+CGG | + | chr5_1:25208884-25208903 | Msa0725490:intron | 55.0% | |
CTTGAGCGACCTTTGTCGAC+TGG | + | chr5_1:25209682-25209701 | Msa0725490:CDS | 55.0% | |
GTTGCTGCTGGTACAGCAGC+TGG | + | chr5_1:25208525-25208544 | Msa0725490:CDS | 60.0% | |
CAAGGAGGGAGCAGCCTACA+GGG | - | chr5_1:25208558-25208577 | None:intergenic | 60.0% | |
CTAAAGCGGTCGCCGCTTAC+AGG | - | chr5_1:25208899-25208918 | None:intergenic | 60.0% | |
CTGTAAGCGGCGACCGCTTT+AGG | + | chr5_1:25208897-25208916 | Msa0725490:intron | 60.0% | |
! | GAGCGACCTTTGTCGACTGG+AGG | + | chr5_1:25209685-25209704 | Msa0725490:CDS | 60.0% |
GCCCCCATGCTCGTACAAGC+TGG | + | chr5_1:25206964-25206983 | Msa0725490:CDS | 65.0% | |
CCAAGGAGGGAGCAGCCTAC+AGG | - | chr5_1:25208559-25208578 | None:intergenic | 65.0% | |
CCTGTAGGCTGCTCCCTCCT+TGG | + | chr5_1:25208556-25208575 | Msa0725490:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 25205503 | 25209978 | 25205503 | ID=Msa0725490;Name=Msa0725490 |
chr5_1 | mRNA | 25205503 | 25209978 | 25205503 | ID=Msa0725490-mRNA-1;Parent=Msa0725490;Name=Msa0725490-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|0.2|1|1|5|0|953 |
chr5_1 | exon | 25205503 | 25207740 | 25205503 | ID=Msa0725490-mRNA-1:exon:9130;Parent=Msa0725490-mRNA-1 |
chr5_1 | exon | 25207835 | 25208060 | 25207835 | ID=Msa0725490-mRNA-1:exon:9131;Parent=Msa0725490-mRNA-1 |
chr5_1 | exon | 25208478 | 25208671 | 25208478 | ID=Msa0725490-mRNA-1:exon:9132;Parent=Msa0725490-mRNA-1 |
chr5_1 | exon | 25209658 | 25209774 | 25209658 | ID=Msa0725490-mRNA-1:exon:9133;Parent=Msa0725490-mRNA-1 |
chr5_1 | exon | 25209892 | 25209978 | 25209892 | ID=Msa0725490-mRNA-1:exon:9134;Parent=Msa0725490-mRNA-1 |
chr5_1 | CDS | 25205503 | 25207740 | 25205503 | ID=Msa0725490-mRNA-1:cds;Parent=Msa0725490-mRNA-1 |
chr5_1 | CDS | 25207835 | 25208060 | 25207835 | ID=Msa0725490-mRNA-1:cds;Parent=Msa0725490-mRNA-1 |
chr5_1 | CDS | 25208478 | 25208671 | 25208478 | ID=Msa0725490-mRNA-1:cds;Parent=Msa0725490-mRNA-1 |
chr5_1 | CDS | 25209658 | 25209774 | 25209658 | ID=Msa0725490-mRNA-1:cds;Parent=Msa0725490-mRNA-1 |
chr5_1 | CDS | 25209892 | 25209978 | 25209892 | ID=Msa0725490-mRNA-1:cds;Parent=Msa0725490-mRNA-1 |
Gene Sequence |
Protein sequence |