Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728070 | XP_003614339.1 | 97.612 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728070 | sp|Q9CAA4|BIM2_ARATH | 52.695 | 334 | 133 | 5 | 1 | 333 | 1 | 310 | 1.49e-111 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728070 | G7JZB3 | 97.612 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0728070 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728070 | MtrunA17_Chr5g0420701 | 97.612 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 0.0 | 682 |
| Msa0728070 | MtrunA17_Chr4g0061791 | 47.401 | 327 | 133 | 11 | 35 | 335 | 256 | 569 | 2.45e-80 | 255 |
| Msa0728070 | MtrunA17_Chr7g0220371 | 41.613 | 310 | 150 | 7 | 41 | 332 | 47 | 343 | 2.70e-59 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0728070 | AT1G69010.1 | 52.695 | 334 | 133 | 5 | 1 | 333 | 1 | 310 | 1.51e-112 | 329 |
| Msa0728070 | AT5G08130.3 | 40.152 | 264 | 113 | 10 | 46 | 303 | 158 | 382 | 4.41e-48 | 167 |
| Msa0728070 | AT5G08130.1 | 39.773 | 264 | 115 | 10 | 46 | 303 | 158 | 383 | 2.27e-47 | 165 |
| Msa0728070 | AT5G38860.1 | 36.334 | 311 | 164 | 7 | 27 | 332 | 16 | 297 | 1.12e-46 | 160 |
| Msa0728070 | AT5G08130.7 | 40.230 | 261 | 117 | 9 | 46 | 303 | 278 | 502 | 1.13e-46 | 166 |
| Msa0728070 | AT5G08130.5 | 40.230 | 261 | 117 | 9 | 46 | 303 | 282 | 506 | 1.19e-46 | 166 |
| Msa0728070 | AT5G08130.2 | 39.847 | 261 | 119 | 9 | 46 | 303 | 278 | 503 | 7.56e-46 | 163 |
| Msa0728070 | AT5G08130.4 | 39.847 | 261 | 119 | 9 | 46 | 303 | 278 | 503 | 7.56e-46 | 163 |
| Msa0728070 | AT5G08130.6 | 39.474 | 266 | 123 | 9 | 41 | 303 | 273 | 503 | 8.46e-46 | 163 |
| Msa0728070 | AT5G08130.8 | 39.847 | 261 | 119 | 9 | 46 | 303 | 282 | 507 | 9.36e-46 | 163 |
| Msa0728070 | AT5G38860.2 | 46.386 | 166 | 83 | 4 | 27 | 187 | 16 | 180 | 2.00e-35 | 128 |
Find 128 sgRNAs with CRISPR-Local
Find 519 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTAAATAATTGGTTATT+TGG | 0.170972 | 5_1:-31707766 | Msa0728070:three_prime_UTR |
| TTTACATAATGTCGCAATTT+TGG | 0.177582 | 5_1:-31707670 | Msa0728070:three_prime_UTR |
| GCGTAGATCATCACCCTTTC+AGG | 0.188150 | 5_1:-31716154 | Msa0728070:intron |
| GATCGTGATCTATCATATTA+TGG | 0.225408 | 5_1:+31712813 | None:intergenic |
| GAGGTTGACCGACAAAATTT+TGG | 0.267640 | 5_1:+31712930 | None:intergenic |
| TGTACTTTCCCATCCTCTTC+AGG | 0.272008 | 5_1:-31712675 | Msa0728070:CDS |
| GTATGAGATCCCTCAATATT+TGG | 0.276214 | 5_1:+31713935 | None:intergenic |
| GGTTATTTGGTGGGTGTATC+TGG | 0.279902 | 5_1:-31707753 | Msa0728070:three_prime_UTR |
| CACAGCTTCATTCTTATTAG+AGG | 0.312925 | 5_1:-31713890 | Msa0728070:intron |
| AATTATTTGTGGAGATGATT+AGG | 0.314518 | 5_1:-31707878 | Msa0728070:three_prime_UTR |
| AGGGTACCTTTGTTGGTGTT+AGG | 0.320153 | 5_1:+31715899 | None:intergenic |
| ATTTCAGTTCAAATTGATCT+TGG | 0.329165 | 5_1:-31709420 | Msa0728070:CDS |
| CCTGAACCATTCTTTACAAT+TGG | 0.334279 | 5_1:+31712908 | None:intergenic |
| GGTGGAGAGGCAACCTGATT+TGG | 0.349714 | 5_1:-31712765 | Msa0728070:CDS |
| TTTCCGGGAAACGGTGATAC+TGG | 0.349733 | 5_1:+31712884 | None:intergenic |
| ACAGTAACCACAAGGGATTA+AGG | 0.350011 | 5_1:+31707968 | None:intergenic |
| AGGAATTAAGCTCAAACAAA+TGG | 0.365316 | 5_1:+31707935 | None:intergenic |
| ATATCTAATGCCCGAAATCT+TGG | 0.368705 | 5_1:-31707705 | Msa0728070:three_prime_UTR |
| ATTCCCTTGCTCGCCAAATC+AGG | 0.384265 | 5_1:+31712752 | None:intergenic |
| CTTTACTACATAATTATTTG+TGG | 0.384317 | 5_1:-31707889 | Msa0728070:three_prime_UTR |
| TTCCCTGCTTTCATTGTTGT+AGG | 0.385791 | 5_1:+31715995 | None:intergenic |
| CAGTAACCACAAGGGATTAA+GGG | 0.388816 | 5_1:+31707969 | None:intergenic |
| GGGTACCTTTGTTGGTGTTA+GGG | 0.402638 | 5_1:+31715900 | None:intergenic |
| CTTTCCCCTCTCTCCGGCGC+TGG | 0.406564 | 5_1:-31716220 | Msa0728070:five_prime_UTR |
| TGAGTATGTTCAGTACTTAC+AGG | 0.412725 | 5_1:-31713766 | Msa0728070:CDS |
| CCCCTCTCTCCGGCGCTGGT+TGG | 0.415509 | 5_1:-31716216 | Msa0728070:five_prime_UTR |
| CTGAATAATCATAATTAGTA+AGG | 0.419725 | 5_1:+31707816 | None:intergenic |
| GGTGTTAGGGGCAGAGGAAG+TGG | 0.420329 | 5_1:+31715913 | None:intergenic |
| GGAATTAAGCTCAAACAAAT+GGG | 0.421566 | 5_1:+31707936 | None:intergenic |
| TTAAGAAAGGGTACCTTTGT+TGG | 0.432841 | 5_1:+31715892 | None:intergenic |
| ATCGTGATCTATCATATTAT+GGG | 0.435013 | 5_1:+31712814 | None:intergenic |
| GTACTTTCCCATCCTCTTCA+GGG | 0.437126 | 5_1:-31712674 | Msa0728070:CDS |
| TTTCAGTTCAAATTGATCTT+GGG | 0.437219 | 5_1:-31709419 | Msa0728070:CDS |
| TGGGAGCCACTATGCATTGT+TGG | 0.440628 | 5_1:+31712833 | None:intergenic |
| CACAAATAATTATGTAGTAA+AGG | 0.441349 | 5_1:+31707890 | None:intergenic |
| CCAATTGTAAAGAATGGTTC+AGG | 0.442919 | 5_1:-31712908 | Msa0728070:CDS |
| CCTTCAGATTCCAAATATTG+AGG | 0.448909 | 5_1:-31713945 | Msa0728070:intron |
| GAGAAACAAAGTAAGAAATC+AGG | 0.450304 | 5_1:+31707993 | None:intergenic |
| CTTCAGATTCCAAATATTGA+GGG | 0.451155 | 5_1:-31713944 | Msa0728070:intron |
| TCATCAAACTTTCCGGGAAA+CGG | 0.451349 | 5_1:+31712875 | None:intergenic |
| GAACCATTCTTTACAATTGG+AGG | 0.459728 | 5_1:+31712911 | None:intergenic |
| TGAGTTTCTCCGGCGGGAAA+AGG | 0.460422 | 5_1:+31716183 | None:intergenic |
| CAGGATGAACTTACAGTTGA+AGG | 0.460627 | 5_1:-31712593 | Msa0728070:CDS |
| GGAGATGAGGCTGTGCCACT+TGG | 0.463787 | 5_1:+31709378 | None:intergenic |
| CTTTCATTGTTGTAGGCAAA+GGG | 0.467185 | 5_1:+31716002 | None:intergenic |
| CAACTGTAAGTTCATCCTGC+TGG | 0.473427 | 5_1:+31712597 | None:intergenic |
| ACTCAAGCGCTACAGAGTGC+TGG | 0.475738 | 5_1:-31709465 | Msa0728070:CDS |
| GGTCCAGTATCACCGTTTCC+CGG | 0.476824 | 5_1:-31712887 | Msa0728070:CDS |
| CAACCTCCAATTGTAAAGAA+TGG | 0.480239 | 5_1:-31712914 | Msa0728070:CDS |
| TTTGTTGGTGTTAGGGGCAG+AGG | 0.484917 | 5_1:+31715907 | None:intergenic |
| GCTTTCATTGTTGTAGGCAA+AGG | 0.487316 | 5_1:+31716001 | None:intergenic |
| AAATATGAAGGCTCGTATCA+AGG | 0.490493 | 5_1:-31713732 | Msa0728070:CDS |
| GCAACCTGATTTGGCGAGCA+AGG | 0.490959 | 5_1:-31712756 | Msa0728070:CDS |
| CATGTGGTTCGACTCATGCT+TGG | 0.494743 | 5_1:+31716251 | None:intergenic |
| TTCTCTCCCTTAATCCCTTG+TGG | 0.496876 | 5_1:-31707975 | Msa0728070:three_prime_UTR |
| AATGATTGATTGCTACATAG+AGG | 0.499026 | 5_1:+31708127 | None:intergenic |
| TGATAGATCACGATCCGACT+CGG | 0.499986 | 5_1:-31712805 | Msa0728070:CDS |
| AACTTACTTTCCCCTCTCTC+CGG | 0.500920 | 5_1:-31716226 | Msa0728070:five_prime_UTR |
| CAAGGGAATTCCTCTGCCTA+TGG | 0.504233 | 5_1:-31712738 | Msa0728070:CDS |
| ACCAACCAGCGCCGGAGAGA+GGG | 0.507583 | 5_1:+31716215 | None:intergenic |
| TCTTGGGAAGCGTGCAAAGA+AGG | 0.509091 | 5_1:-31709403 | Msa0728070:CDS |
| TTGAGTTGTTCACTCGTTGT+GGG | 0.512133 | 5_1:+31712620 | None:intergenic |
| GGTTTGGAACGAACCTGAAA+GGG | 0.514718 | 5_1:+31716141 | None:intergenic |
| TAAATAATTGGTTATTTGGT+GGG | 0.515763 | 5_1:-31707762 | Msa0728070:three_prime_UTR |
| ATGAAGGCTCGTATCAAGGC+TGG | 0.517535 | 5_1:-31713728 | Msa0728070:CDS |
| TACCTCAATGTGATCAAAAG+AGG | 0.521201 | 5_1:-31713915 | Msa0728070:CDS |
| CTCAAGCGCTACAGAGTGCT+GGG | 0.524190 | 5_1:-31709464 | Msa0728070:CDS |
| ACGCCGGCGTTGAGTTTCTC+CGG | 0.529038 | 5_1:+31716173 | None:intergenic |
| TTGCCTACAACAATGAAAGC+AGG | 0.539094 | 5_1:-31715998 | Msa0728070:exon |
| GATAGATCACGATCCGACTC+GGG | 0.540435 | 5_1:-31712804 | Msa0728070:CDS |
| AGAAATCAGGATGAAAATGT+AGG | 0.541156 | 5_1:+31708006 | None:intergenic |
| TTTGCAGCTTTAGTCATGAA+AGG | 0.542074 | 5_1:+31707915 | None:intergenic |
| AGATGGGAAAGCTACTGATA+AGG | 0.542435 | 5_1:-31714706 | Msa0728070:CDS |
| AAACAGTTCCCTGAAGAGGA+TGG | 0.542486 | 5_1:+31712666 | None:intergenic |
| GTTGAGTTGTTCACTCGTTG+TGG | 0.544799 | 5_1:+31712619 | None:intergenic |
| AACCGTCGAAGTTGATGCCA+TGG | 0.544835 | 5_1:-31713698 | Msa0728070:CDS |
| GGGTTTGGAACGAACCTGAA+AGG | 0.547076 | 5_1:+31716140 | None:intergenic |
| CGGCGTTGAGTTTCTCCGGC+GGG | 0.550114 | 5_1:+31716177 | None:intergenic |
| TCTGTTCCTGTCAGAAGTGA+TGG | 0.550958 | 5_1:-31712698 | Msa0728070:CDS |
| AACCAACCAGCGCCGGAGAG+AGG | 0.554183 | 5_1:+31716214 | None:intergenic |
| ACCCATGGCATCAACTTCGA+CGG | 0.559522 | 5_1:+31713696 | None:intergenic |
| TCTGTATACCTTGGGAGATG+AGG | 0.560824 | 5_1:+31709365 | None:intergenic |
| AACAGTTCCCTGAAGAGGAT+GGG | 0.561389 | 5_1:+31712667 | None:intergenic |
| GGTACCTTTGTTGGTGTTAG+GGG | 0.569166 | 5_1:+31715901 | None:intergenic |
| ATCTCGAGTGTATACTCCCA+AGG | 0.571871 | 5_1:-31712557 | Msa0728070:CDS |
| CCAACCAGCGCCGGAGAGAG+GGG | 0.573673 | 5_1:+31716216 | None:intergenic |
| GTAAATAATTGGTTATTTGG+TGG | 0.575397 | 5_1:-31707763 | Msa0728070:three_prime_UTR |
| ATCTCTCCAACAATGCATAG+TGG | 0.578551 | 5_1:-31712839 | Msa0728070:CDS |
| ACATTCAGTTGATTGTGCAT+CGG | 0.585244 | 5_1:+31712643 | None:intergenic |
| GTATCTGGACAAACTAAATG+TGG | 0.588616 | 5_1:-31707738 | Msa0728070:three_prime_UTR |
| ATGTTTGCATGCATAGCCAT+AGG | 0.589737 | 5_1:+31712722 | None:intergenic |
| ATGATTGATTGCTACATAGA+GGG | 0.589862 | 5_1:+31708128 | None:intergenic |
| GATCCGACTCGGGATATTGT+CGG | 0.590573 | 5_1:-31712794 | Msa0728070:CDS |
| CAACCTGATTTGGCGAGCAA+GGG | 0.591521 | 5_1:-31712755 | Msa0728070:CDS |
| GAAGAAGCAAGATAAATGAG+AGG | 0.595996 | 5_1:-31714641 | Msa0728070:intron |
| TCGGAAACAGTTCCCTGAAG+AGG | 0.597102 | 5_1:+31712662 | None:intergenic |
| TGCCTACAACAATGAAAGCA+GGG | 0.600473 | 5_1:-31715997 | Msa0728070:exon |
| CATGAGTAACCAACCAGCGC+CGG | 0.600865 | 5_1:+31716207 | None:intergenic |
| TAAGCTCAAACAAATGGGGA+AGG | 0.604535 | 5_1:+31707941 | None:intergenic |
| GAGTGAACAACTCAACCAGC+AGG | 0.605106 | 5_1:-31712612 | Msa0728070:CDS |
| GCATGCATAGCCATAGGCAG+AGG | 0.609045 | 5_1:+31712728 | None:intergenic |
| ACCTCAATGTGATCAAAAGA+GGG | 0.612540 | 5_1:-31713914 | Msa0728070:CDS |
| AGTACACCATCACTTCTGAC+AGG | 0.614723 | 5_1:+31712692 | None:intergenic |
| AACATTCTGTAACGGAGCAG+CGG | 0.620536 | 5_1:-31714665 | Msa0728070:CDS |
| TGGCACAGCCTCATCTCCCA+AGG | 0.623367 | 5_1:-31709373 | Msa0728070:intron |
| ACCGTCGAAGTTGATGCCAT+GGG | 0.624180 | 5_1:-31713697 | Msa0728070:intron |
| AAGATCGAAACATTCTGTAA+CGG | 0.625212 | 5_1:-31714673 | Msa0728070:CDS |
| GGATATTGTCGGCAAGACGG+TGG | 0.627342 | 5_1:-31712783 | Msa0728070:CDS |
| TCGGGATATTGTCGGCAAGA+CGG | 0.635071 | 5_1:-31712786 | Msa0728070:CDS |
| ATGTTCAGTACTTACAGGAG+AGG | 0.638295 | 5_1:-31713761 | Msa0728070:CDS |
| CCGGCGTTGAGTTTCTCCGG+CGG | 0.641277 | 5_1:+31716176 | None:intergenic |
| TGCTGGGTTAGATCTGTCAA+AGG | 0.641347 | 5_1:-31709448 | Msa0728070:CDS |
| GATGAACTTACAGTTGAAGG+AGG | 0.651861 | 5_1:-31712590 | Msa0728070:CDS |
| TTGTCGGCAAGACGGTGGAG+AGG | 0.652023 | 5_1:-31712778 | Msa0728070:CDS |
| TGTTCAGTACTTACAGGAGA+GGG | 0.653015 | 5_1:-31713760 | Msa0728070:CDS |
| TCTCGAGTGTATACTCCCAA+GGG | 0.653032 | 5_1:-31712556 | Msa0728070:intron |
| TATCTGGACAAACTAAATGT+GGG | 0.664186 | 5_1:-31707737 | Msa0728070:three_prime_UTR |
| ATACAAGTGAATAATTCATG+TGG | 0.664328 | 5_1:-31708041 | Msa0728070:exon |
| GGGGAAAGTAAGTTAGCATG+TGG | 0.671617 | 5_1:+31716235 | None:intergenic |
| ATGAACTTACAGTTGAAGGA+GGG | 0.671653 | 5_1:-31712589 | Msa0728070:CDS |
| TTGCCGACAATATCCCGAGT+CGG | 0.672673 | 5_1:+31712791 | None:intergenic |
| TCTGCCCCTAACACCAACAA+AGG | 0.684939 | 5_1:-31715905 | Msa0728070:intron |
| AAGGATTTACAGTAACCACA+AGG | 0.686022 | 5_1:+31707960 | None:intergenic |
| GAATTAAGCTCAAACAAATG+GGG | 0.688322 | 5_1:+31707937 | None:intergenic |
| CCGCCGGAGAAACTCAACGC+CGG | 0.691571 | 5_1:-31716176 | Msa0728070:five_prime_UTR |
| GAAAGGGTGATGATCTACGC+CGG | 0.691836 | 5_1:+31716157 | None:intergenic |
| CGTGCAAAGAAGGATCCAAG+TGG | 0.732676 | 5_1:-31709393 | Msa0728070:CDS |
| AGGATTTACAGTAACCACAA+GGG | 0.740195 | 5_1:+31707961 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGAAAGTTAATTATTTTT+CGG | - | chr5_1:31707663-31707682 | Msa0728070:three_prime_UTR | 10.0% |
| !!! | TTTTTTTATTGTAAAAACAA+TGG | - | chr5_1:31708812-31708831 | Msa0728070:intron | 10.0% |
| !!! | CAATTTTCATAAATATATAT+AGG | - | chr5_1:31710565-31710584 | Msa0728070:intron | 10.0% |
| !! | GTAAAAAAAAAAAAAAATAG+AGG | + | chr5_1:31714330-31714349 | None:intergenic | 10.0% |
| !! | TACTATTATTAATGAATTTA+AGG | - | chr5_1:31714769-31714788 | Msa0728070:intron | 10.0% |
| !! | ACTATTATTAATGAATTTAA+GGG | - | chr5_1:31714770-31714789 | Msa0728070:intron | 10.0% |
| !!! | ATTTTATCAAAGATAAAATT+AGG | - | chr5_1:31714825-31714844 | Msa0728070:intron | 10.0% |
| !! | TATAAGAATTAAAAAAATTG+AGG | - | chr5_1:31715619-31715638 | Msa0728070:intron | 10.0% |
| !! | ATAAGAATTAAAAAAATTGA+GGG | - | chr5_1:31715620-31715639 | Msa0728070:intron | 10.0% |
| !!! | AAAAACATGTTTTTAAGAAA+GGG | + | chr5_1:31708072-31708091 | None:intergenic | 15.0% |
| !!! | TAAAAACATGTTTTTAAGAA+AGG | + | chr5_1:31708073-31708092 | None:intergenic | 15.0% |
| !! | TATTGTTAGATCTAATTATA+AGG | - | chr5_1:31708107-31708126 | Msa0728070:CDS | 15.0% |
| !! | TTATTGTAAAAACAAATCAT+AGG | - | chr5_1:31708137-31708156 | Msa0728070:CDS | 15.0% |
| !! | TATTGTAAAAACAAATCATA+GGG | - | chr5_1:31708138-31708157 | Msa0728070:CDS | 15.0% |
| !!! | AATTTGGTATTATTTTTTGT+CGG | - | chr5_1:31708164-31708183 | Msa0728070:intron | 15.0% |
| !! | TTATGTAAATAAAATAGTGT+TGG | - | chr5_1:31709666-31709685 | Msa0728070:intron | 15.0% |
| !! | TATGTAAATAAAATAGTGTT+GGG | - | chr5_1:31709667-31709686 | Msa0728070:intron | 15.0% |
| !! | ATATAAATATAGAGTGAAAT+AGG | - | chr5_1:31710469-31710488 | Msa0728070:intron | 15.0% |
| !!! | AAATAAATACTTGCTATTTA+TGG | + | chr5_1:31710594-31710613 | None:intergenic | 15.0% |
| !! | AAGATAAAAATAAAAATCGA+TGG | + | chr5_1:31710840-31710859 | None:intergenic | 15.0% |
| !! | ATATTATTGACATATGAAAA+AGG | + | chr5_1:31711652-31711671 | None:intergenic | 15.0% |
| !! | TAATACAAAAAATGTATAAC+AGG | + | chr5_1:31713619-31713638 | None:intergenic | 15.0% |
| !! | TATAAAATATTCTGTAAAAC+AGG | - | chr5_1:31714446-31714465 | Msa0728070:intron | 15.0% |
| !!! | TAATATTTTTTATATGTCCT+CGG | - | chr5_1:31714675-31714694 | Msa0728070:CDS | 15.0% |
| !!! | ATTTTATCTTTGATAAAATC+AGG | + | chr5_1:31714824-31714843 | None:intergenic | 15.0% |
| !!! | TGAGAGTATTAAAATTTTAA+AGG | - | chr5_1:31715085-31715104 | Msa0728070:intron | 15.0% |
| !! | ATTTGAAAATATTTAGTAGA+AGG | - | chr5_1:31715575-31715594 | Msa0728070:intron | 15.0% |
| !!! | TGCAATTTTATGTAAATAAT+TGG | - | chr5_1:31716175-31716194 | Msa0728070:five_prime_UTR | 15.0% |
| !! | TATGTAAATAATTGGTTATT+TGG | - | chr5_1:31716183-31716202 | Msa0728070:five_prime_UTR | 15.0% |
| !!! | AAGTTAATTATTTTTCGGAA+AGG | - | chr5_1:31707668-31707687 | Msa0728070:three_prime_UTR | 20.0% |
| !!! | CTCAAAATTTTCATCTTTTT+CGG | - | chr5_1:31707891-31707910 | Msa0728070:three_prime_UTR | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | - | chr5_1:31708382-31708401 | Msa0728070:intron | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | - | chr5_1:31708382-31708401 | Msa0728070:intron | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | - | chr5_1:31708382-31708401 | Msa0728070:intron | 20.0% |
| !!! | TGTGTAAAATTGATTTACAT+TGG | - | chr5_1:31708741-31708760 | Msa0728070:intron | 20.0% |
| !!! | TGTTGTTATTGTATTGATTT+TGG | - | chr5_1:31709132-31709151 | Msa0728070:intron | 20.0% |
| !! | TTTGGAAAAGTTATTGAATA+TGG | - | chr5_1:31709150-31709169 | Msa0728070:intron | 20.0% |
| !!! | TTGTTTTAGATTGATTTGTT+GGG | - | chr5_1:31709204-31709223 | Msa0728070:intron | 20.0% |
| !! | AATATATTGGTAAAATATGC+TGG | - | chr5_1:31709347-31709366 | Msa0728070:intron | 20.0% |
| !!! | AAAATATGCTGGAATTTTTT+TGG | - | chr5_1:31709358-31709377 | Msa0728070:intron | 20.0% |
| !! | ATTAGATGAACTATAGATTT+AGG | - | chr5_1:31710278-31710297 | Msa0728070:intron | 20.0% |
| !! | CAAAAGTTTGAGAAAAAAAT+TGG | - | chr5_1:31710629-31710648 | Msa0728070:intron | 20.0% |
| !! | CAAAGATAGAAATTATGTAT+TGG | + | chr5_1:31710663-31710682 | None:intergenic | 20.0% |
| !! | CAATACATAATTTCTATCTT+TGG | - | chr5_1:31710661-31710680 | Msa0728070:intron | 20.0% |
| !! | ATAGCAATAACAATTTAAAC+CGG | + | chr5_1:31710951-31710970 | None:intergenic | 20.0% |
| !!! | AGTTTTAAAACTGTAACAAA+GGG | + | chr5_1:31711546-31711565 | None:intergenic | 20.0% |
| !! | AACAAAATATTGAAAAGCTA+GGG | - | chr5_1:31711912-31711931 | Msa0728070:intron | 20.0% |
| !!! | TAGTGATTTGTTTTCTTTTA+CGG | - | chr5_1:31713186-31713205 | Msa0728070:intron | 20.0% |
| !! | ATTTGTATTATGCTATGATT+TGG | - | chr5_1:31713588-31713607 | Msa0728070:intron | 20.0% |
| !! | AAAAAAAAAAAATAGAGGCA+AGG | + | chr5_1:31713886-31713905 | None:intergenic | 20.0% |
| !! | GCTACAAAATTAATCTTAAT+AGG | + | chr5_1:31713954-31713973 | None:intergenic | 20.0% |
| !! | ATTTGTATTATGCTATGATT+TGG | - | chr5_1:31713588-31713607 | Msa0728070:intron | 20.0% |
| !! | AAAAAAAAAAAATAGAGGCA+AGG | + | chr5_1:31713886-31713905 | None:intergenic | 20.0% |
| !! | GCTACAAAATTAATCTTAAT+AGG | + | chr5_1:31713954-31713973 | None:intergenic | 20.0% |
| !!! | TAGTATTTGTACCTTTTAAT+TGG | - | chr5_1:31714625-31714644 | Msa0728070:intron | 20.0% |
| !! | TATAATATAATCTTTGTCCT+CGG | - | chr5_1:31714700-31714719 | Msa0728070:CDS | 20.0% |
| !! | AAAGATAAAATTAGGTTTGA+AGG | - | chr5_1:31714833-31714852 | Msa0728070:intron | 20.0% |
| !!! | TAAAGGTGTAATTTTACTTT+TGG | - | chr5_1:31715102-31715121 | Msa0728070:intron | 20.0% |
| !! | ATTTGCTTACTTTAGATAAA+CGG | + | chr5_1:31715187-31715206 | None:intergenic | 20.0% |
| !!! | TTTTGAAGGTTTTAGATAAA+GGG | + | chr5_1:31715230-31715249 | None:intergenic | 20.0% |
| !! | TTGTTAGATTATGAAAGATT+TGG | - | chr5_1:31715422-31715441 | Msa0728070:intron | 20.0% |
| !!! | TTCGAATTTTTAGAATTTTG+AGG | + | chr5_1:31715676-31715695 | None:intergenic | 20.0% |
| !!! | GAAGTTAATGAATATTTTAG+AGG | - | chr5_1:31715693-31715712 | Msa0728070:intron | 20.0% |
| !! | CACAAATAATTATGTAGTAA+AGG | + | chr5_1:31716062-31716081 | None:intergenic | 20.0% |
| !! | CTTTACTACATAATTATTTG+TGG | - | chr5_1:31716060-31716079 | Msa0728070:intron | 20.0% |
| !! | CTGAATAATCATAATTAGTA+AGG | + | chr5_1:31716136-31716155 | None:intergenic | 20.0% |
| !!! | ATTCAGTTTTATTAAGCTTT+TGG | - | chr5_1:31716150-31716169 | Msa0728070:intron | 20.0% |
| !!! | TTCAGTTTTATTAAGCTTTT+GGG | - | chr5_1:31716151-31716170 | Msa0728070:intron | 20.0% |
| !! | TAAATAATTGGTTATTTGGT+GGG | - | chr5_1:31716187-31716206 | Msa0728070:five_prime_UTR | 20.0% |
| !! | AGAAATAAAAACCAAGATTT+CGG | + | chr5_1:31716258-31716277 | None:intergenic | 20.0% |
| !! | ATGAAAATTTTGAGCGAAAA+AGG | + | chr5_1:31707885-31707904 | None:intergenic | 25.0% |
| ! | ACAAATCATAGGGAATAATT+TGG | - | chr5_1:31708148-31708167 | Msa0728070:intron | 25.0% |
| ! | TTCAGTGTAATTATAGGTAT+TGG | - | chr5_1:31708593-31708612 | Msa0728070:intron | 25.0% |
| !! | ATTTTACACAGACATCTTAT+AGG | + | chr5_1:31708731-31708750 | None:intergenic | 25.0% |
| ! | AAAAACAATGGTTGAAAAGA+TGG | - | chr5_1:31708824-31708843 | Msa0728070:intron | 25.0% |
| ! | AAGTAAGGAATAAGATTAGA+TGG | - | chr5_1:31708902-31708921 | Msa0728070:intron | 25.0% |
| ! | TAAACTATTAGATGTGTGTT+TGG | - | chr5_1:31708949-31708968 | Msa0728070:intron | 25.0% |
| ! | GAAAAGTTATTGAATATGGT+GGG | - | chr5_1:31709154-31709173 | Msa0728070:intron | 25.0% |
| ! | AAAAGTTATTGAATATGGTG+GGG | - | chr5_1:31709155-31709174 | Msa0728070:intron | 25.0% |
| !!! | GTTGTTTTAGATTGATTTGT+TGG | - | chr5_1:31709203-31709222 | Msa0728070:intron | 25.0% |
| ! | TTTGCAAGTGCAAAATATAT+TGG | - | chr5_1:31709334-31709353 | Msa0728070:intron | 25.0% |
| ! | TTCTCTTATGCATGTTTATT+TGG | - | chr5_1:31709437-31709456 | Msa0728070:CDS | 25.0% |
| ! | AAATAAACTGAAGCAATGAA+GGG | + | chr5_1:31709536-31709555 | None:intergenic | 25.0% |
| ! | AAAATAAACTGAAGCAATGA+AGG | + | chr5_1:31709537-31709556 | None:intergenic | 25.0% |
| !!! | TTTGGTGTTTCTTTACATTT+GGG | - | chr5_1:31709615-31709634 | Msa0728070:intron | 25.0% |
| !!! | ACTATTTTTAGAGATTTGCA+TGG | + | chr5_1:31710319-31710338 | None:intergenic | 25.0% |
| ! | TAAAATGATGACATAAAGTC+TGG | - | chr5_1:31710374-31710393 | Msa0728070:intron | 25.0% |
| ! | ATATAGAGTGAAATAGGAAA+TGG | - | chr5_1:31710475-31710494 | Msa0728070:intron | 25.0% |
| ! | TATAGAGTGAAATAGGAAAT+GGG | - | chr5_1:31710476-31710495 | Msa0728070:intron | 25.0% |
| ! | CATAATACAACAAATAGTTG+TGG | + | chr5_1:31710708-31710727 | None:intergenic | 25.0% |
| ! | CGATGGAAATAAAAATAAGA+TGG | + | chr5_1:31710823-31710842 | None:intergenic | 25.0% |
| ! | TAGAGTAACATGAATGTTAA+TGG | - | chr5_1:31710915-31710934 | Msa0728070:intron | 25.0% |
| ! | ATCGTGATCTATCATATTAT+GGG | + | chr5_1:31711138-31711157 | None:intergenic | 25.0% |
| ! | AAAATATCTGACTACTTGTA+TGG | - | chr5_1:31711454-31711473 | Msa0728070:intron | 25.0% |
| !!! | GAGTTTTAAAACTGTAACAA+AGG | + | chr5_1:31711547-31711566 | None:intergenic | 25.0% |
| ! | AAAAAATTCACGTTTGTGAA+TGG | - | chr5_1:31711787-31711806 | Msa0728070:intron | 25.0% |
| !! | TCAATATTTTGTTGAAGCAT+AGG | + | chr5_1:31711905-31711924 | None:intergenic | 25.0% |
| ! | CAACAAAATATTGAAAAGCT+AGG | - | chr5_1:31711911-31711930 | Msa0728070:intron | 25.0% |
| ! | ACAAAATATTGAAAAGCTAG+GGG | - | chr5_1:31711913-31711932 | Msa0728070:intron | 25.0% |
| !!! | AGCTATAACTTTTATTGACT+TGG | - | chr5_1:31711959-31711978 | Msa0728070:intron | 25.0% |
| !! | TTTTAACAACCATGTCTAAA+GGG | + | chr5_1:31712006-31712025 | None:intergenic | 25.0% |
| !!! | ATTTTAACAACCATGTCTAA+AGG | + | chr5_1:31712007-31712026 | None:intergenic | 25.0% |
| !!! | AATTCTTGTTAACTTGCTTA+CGG | - | chr5_1:31712069-31712088 | Msa0728070:intron | 25.0% |
| ! | TTTATTCAATATCCTAGCAA+TGG | + | chr5_1:31712693-31712712 | None:intergenic | 25.0% |
| ! | TTGCTAGGATATTGAATAAA+AGG | - | chr5_1:31712693-31712712 | Msa0728070:CDS | 25.0% |
| ! | TGCTAGGATATTGAATAAAA+GGG | - | chr5_1:31712694-31712713 | Msa0728070:CDS | 25.0% |
| ! | ATTTCAGTTCAAATTGATCT+TGG | - | chr5_1:31714529-31714548 | Msa0728070:intron | 25.0% |
| ! | TTTCAGTTCAAATTGATCTT+GGG | - | chr5_1:31714530-31714549 | Msa0728070:intron | 25.0% |
| ! | CAAATACTAATGAAGACAAA+AGG | + | chr5_1:31714614-31714633 | None:intergenic | 25.0% |
| ! | AAAGATTATATTATAAGCCG+AGG | + | chr5_1:31714695-31714714 | None:intergenic | 25.0% |
| !!! | AGTTTTTTATTTAAAAGCCG+AGG | + | chr5_1:31714720-31714739 | None:intergenic | 25.0% |
| !! | CGGCTTTTAAATAAAAAACT+TGG | - | chr5_1:31714720-31714739 | Msa0728070:intron | 25.0% |
| ! | TTTGACAAATATTAGTGTTG+AGG | - | chr5_1:31714798-31714817 | Msa0728070:intron | 25.0% |
| ! | ATATGATAACCTTAGTACAT+AGG | + | chr5_1:31714946-31714965 | None:intergenic | 25.0% |
| !!! | TTACTTTTGGTATTCTAGTT+TGG | - | chr5_1:31715115-31715134 | Msa0728070:intron | 25.0% |
| !!! | GTTTTGAAGGTTTTAGATAA+AGG | + | chr5_1:31715231-31715250 | None:intergenic | 25.0% |
| ! | GAACAAGATGTTATAAAAAC+CGG | - | chr5_1:31715326-31715345 | Msa0728070:intron | 25.0% |
| ! | AGAAGGATAAACTATGTTTA+AGG | + | chr5_1:31715467-31715486 | None:intergenic | 25.0% |
| ! | TAGAATTTGTAAGATGTGAT+AGG | - | chr5_1:31715533-31715552 | Msa0728070:intron | 25.0% |
| ! | TAAAACAATTAGTCCTGAAA+GGG | + | chr5_1:31715771-31715790 | None:intergenic | 25.0% |
| ! | ATAAAACAATTAGTCCTGAA+AGG | + | chr5_1:31715772-31715791 | None:intergenic | 25.0% |
| ! | ATACAAGTGAATAATTCATG+TGG | - | chr5_1:31715908-31715927 | Msa0728070:CDS | 25.0% |
| ! | AATTATTTGTGGAGATGATT+AGG | - | chr5_1:31716071-31716090 | Msa0728070:intron | 25.0% |
| ! | GTAAATAATTGGTTATTTGG+TGG | - | chr5_1:31716186-31716205 | Msa0728070:five_prime_UTR | 25.0% |
| ! | GAAATAAAAACCAAGATTTC+GGG | + | chr5_1:31716257-31716276 | None:intergenic | 25.0% |
| !! | TTTACATAATGTCGCAATTT+TGG | - | chr5_1:31716279-31716298 | Msa0728070:five_prime_UTR | 25.0% |
| TGAAAAGAGAAAGAGGAATT+GGG | + | chr5_1:31707832-31707851 | None:intergenic | 30.0% | |
| ATGAAAAGAGAAAGAGGAAT+TGG | + | chr5_1:31707833-31707852 | None:intergenic | 30.0% | |
| AGAGAAATGAAAAGAGAAAG+AGG | + | chr5_1:31707839-31707858 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTCGGACTGAATT+CGG | - | chr5_1:31708175-31708194 | Msa0728070:intron | 30.0% |
| ! | AGGTAATTTTACAGAACACA+CGG | + | chr5_1:31708290-31708309 | None:intergenic | 30.0% |
| TTCTCAAATTACTAGTGTGT+CGG | + | chr5_1:31708358-31708377 | None:intergenic | 30.0% | |
| TTCAGTGTAATTATAGGTGT+TGG | - | chr5_1:31708388-31708407 | Msa0728070:intron | 30.0% | |
| TTCAGTGTAATTATAGGTGT+TGG | - | chr5_1:31708388-31708407 | Msa0728070:intron | 30.0% | |
| !! | GTAATTATAGGTATTGGTGT+CGG | - | chr5_1:31708599-31708618 | Msa0728070:intron | 30.0% |
| ATCATTAAAGTGGAGTGTAA+GGG | + | chr5_1:31708685-31708704 | None:intergenic | 30.0% | |
| TATCATTAAAGTGGAGTGTA+AGG | + | chr5_1:31708686-31708705 | None:intergenic | 30.0% | |
| AACACATATATGCTGAAGTA+AGG | - | chr5_1:31708887-31708906 | Msa0728070:intron | 30.0% | |
| TAAGGAATAAGATTAGATGG+AGG | - | chr5_1:31708905-31708924 | Msa0728070:intron | 30.0% | |
| TTCACTGTAGATTAAAGAGT+TGG | - | chr5_1:31709022-31709041 | Msa0728070:intron | 30.0% | |
| TAAAGAGTTGGATCGAAAAA+TGG | - | chr5_1:31709034-31709053 | Msa0728070:intron | 30.0% | |
| GGAAAAGTTATTGAATATGG+TGG | - | chr5_1:31709153-31709172 | Msa0728070:intron | 30.0% | |
| AAGATCGAAACATTCTGTAA+CGG | - | chr5_1:31709276-31709295 | Msa0728070:intron | 30.0% | |
| TGTGCTAGTGTATGTTTATT+CGG | - | chr5_1:31709381-31709400 | Msa0728070:CDS | 30.0% | |
| GTATGTTTATTCGGACTATA+CGG | - | chr5_1:31709390-31709409 | Msa0728070:CDS | 30.0% | |
| ! | AGAATTATTTGCGAGCATTT+TGG | - | chr5_1:31709578-31709597 | Msa0728070:intron | 30.0% |
| ! | GAATTATTTGCGAGCATTTT+GGG | - | chr5_1:31709579-31709598 | Msa0728070:intron | 30.0% |
| !! | GTTTGGTGTTTCTTTACATT+TGG | - | chr5_1:31709614-31709633 | Msa0728070:intron | 30.0% |
| ! | TTGGTGTTTCTTTACATTTG+GGG | - | chr5_1:31709616-31709635 | Msa0728070:intron | 30.0% |
| ! | AGTGTCAAAAGCATGAAAAT+CGG | - | chr5_1:31709692-31709711 | Msa0728070:intron | 30.0% |
| TTTAAGCTCTCAAAAGATCA+CGG | + | chr5_1:31709907-31709926 | None:intergenic | 30.0% | |
| ! | CTAAACTAGAGATTGATGAT+TGG | - | chr5_1:31709972-31709991 | Msa0728070:intron | 30.0% |
| CTTCAGATTCCAAATATTGA+GGG | - | chr5_1:31710005-31710024 | Msa0728070:intron | 30.0% | |
| TAGTTCATCTAATTTACCCA+TGG | + | chr5_1:31710271-31710290 | None:intergenic | 30.0% | |
| TAATCTTCATCAATCCATCT+AGG | + | chr5_1:31710431-31710450 | None:intergenic | 30.0% | |
| GATACAAATATACAATGGAC+CGG | + | chr5_1:31710523-31710542 | None:intergenic | 30.0% | |
| AGGCAGATACAAATATACAA+TGG | + | chr5_1:31710528-31710547 | None:intergenic | 30.0% | |
| !! | TTGAAATCCAGAAAGCATTT+AGG | + | chr5_1:31710548-31710567 | None:intergenic | 30.0% |
| !! | GGCATATTATTTTGCCAAAT+TGG | - | chr5_1:31710682-31710701 | Msa0728070:intron | 30.0% |
| TTAGAGAAATTGCAACATGA+TGG | + | chr5_1:31710865-31710884 | None:intergenic | 30.0% | |
| AACAATTTAAACCGGCAAAT+TGG | + | chr5_1:31710943-31710962 | None:intergenic | 30.0% | |
| ! | TTTTACAGAGAAATAGCCAT+TGG | - | chr5_1:31710991-31711010 | Msa0728070:intron | 30.0% |
| ! | ACTGTTTTCATCAAACTTTC+CGG | + | chr5_1:31711084-31711103 | None:intergenic | 30.0% |
| GATCGTGATCTATCATATTA+TGG | + | chr5_1:31711139-31711158 | None:intergenic | 30.0% | |
| TTTATGTAATACTCACCCTT+GGG | + | chr5_1:31711411-31711430 | None:intergenic | 30.0% | |
| ! | TTTTATGTAATACTCACCCT+TGG | + | chr5_1:31711412-31711431 | None:intergenic | 30.0% |
| !! | TATTTTCAGGGCAAACAAAA+AGG | + | chr5_1:31711440-31711459 | None:intergenic | 30.0% |
| ! | CAAGTAGTCAGATATTTTCA+GGG | + | chr5_1:31711452-31711471 | None:intergenic | 30.0% |
| ! | ACAAGTAGTCAGATATTTTC+AGG | + | chr5_1:31711453-31711472 | None:intergenic | 30.0% |
| TCAAAAGAAAGAACTTCACA+TGG | + | chr5_1:31711573-31711592 | None:intergenic | 30.0% | |
| GTTCATTGAGATCTCAATAA+TGG | - | chr5_1:31711674-31711693 | Msa0728070:intron | 30.0% | |
| GTGAATGAATTGTAACAAAC+AGG | + | chr5_1:31711744-31711763 | None:intergenic | 30.0% | |
| TTTGTGAATGGCTTTCTTTA+TGG | - | chr5_1:31711799-31711818 | Msa0728070:intron | 30.0% | |
| GGCTTTCTTTATGGAAAAAA+AGG | - | chr5_1:31711808-31711827 | Msa0728070:intron | 30.0% | |
| GCTAGGTTATTGTATTTCTT+TGG | - | chr5_1:31711861-31711880 | Msa0728070:intron | 30.0% | |
| ! | GATCACATTATTTATCGACT+CGG | - | chr5_1:31711935-31711954 | Msa0728070:intron | 30.0% |
| CATGTCTAAAGGGTAAAAAA+TGG | + | chr5_1:31711996-31712015 | None:intergenic | 30.0% | |
| !!! | CATTTTTTACCCTTTAGACA+TGG | - | chr5_1:31711994-31712013 | Msa0728070:intron | 30.0% |
| TTAGACTTGAAAGTTTGATG+AGG | - | chr5_1:31712112-31712131 | Msa0728070:intron | 30.0% | |
| CACCAATGTTGTTAAATAAC+CGG | - | chr5_1:31712152-31712171 | Msa0728070:intron | 30.0% | |
| ! | TACCGGTTATTTAACAACAT+TGG | + | chr5_1:31712157-31712176 | None:intergenic | 30.0% |
| ! | TTTGTGAATGTGATGATGTT+AGG | + | chr5_1:31712370-31712389 | None:intergenic | 30.0% |
| GGTTCTCATGAAAAATTTGT+AGG | - | chr5_1:31712815-31712834 | Msa0728070:CDS | 30.0% | |
| GGATAAATAGACAAATCACA+AGG | + | chr5_1:31713473-31713492 | None:intergenic | 30.0% | |
| AAATTGACATATGTCCAGAT+AGG | + | chr5_1:31713542-31713561 | None:intergenic | 30.0% | |
| !! | TATTATGCTATGATTTGGTC+TGG | - | chr5_1:31713593-31713612 | Msa0728070:intron | 30.0% |
| GCAATAGCAATGTAATATAG+CGG | + | chr5_1:31713739-31713758 | None:intergenic | 30.0% | |
| !! | TATTATGCTATGATTTGGTC+TGG | - | chr5_1:31713593-31713612 | Msa0728070:intron | 30.0% |
| GCAATAGCAATGTAATATAG+CGG | + | chr5_1:31713739-31713758 | None:intergenic | 30.0% | |
| ACAAACCGCTATTATTATGT+GGG | + | chr5_1:31714242-31714261 | None:intergenic | 30.0% | |
| !! | TTTGTACCTTTTAATTGGCA+AGG | - | chr5_1:31714630-31714649 | Msa0728070:intron | 30.0% |
| AAAAAATCACTCTCATGCAT+TGG | + | chr5_1:31714874-31714893 | None:intergenic | 30.0% | |
| TATGATTCTTGTCCAAGAAA+AGG | - | chr5_1:31715281-31715300 | Msa0728070:intron | 30.0% | |
| !!! | AAGCAAGAGTTTTTAGTAGA+AGG | + | chr5_1:31715484-31715503 | None:intergenic | 30.0% |
| CTAAAAACTCTTGCTTTCTA+TGG | - | chr5_1:31715488-31715507 | Msa0728070:intron | 30.0% | |
| ATTTGTAAGATGTGATAGGT+TGG | - | chr5_1:31715537-31715556 | Msa0728070:intron | 30.0% | |
| TTAATGAACATTTCCCTTTC+AGG | - | chr5_1:31715755-31715774 | Msa0728070:intron | 30.0% | |
| ATGATTGATTGCTACATAGA+GGG | + | chr5_1:31715824-31715843 | None:intergenic | 30.0% | |
| AATGATTGATTGCTACATAG+AGG | + | chr5_1:31715825-31715844 | None:intergenic | 30.0% | |
| !! | TCATTTGCACATTTTAGAGA+TGG | - | chr5_1:31715840-31715859 | Msa0728070:intron | 30.0% |
| AGAAATCAGGATGAAAATGT+AGG | + | chr5_1:31715946-31715965 | None:intergenic | 30.0% | |
| GAGAAACAAAGTAAGAAATC+AGG | + | chr5_1:31715959-31715978 | None:intergenic | 30.0% | |
| GAATTAAGCTCAAACAAATG+GGG | + | chr5_1:31716015-31716034 | None:intergenic | 30.0% | |
| GGAATTAAGCTCAAACAAAT+GGG | + | chr5_1:31716016-31716035 | None:intergenic | 30.0% | |
| AGGAATTAAGCTCAAACAAA+TGG | + | chr5_1:31716017-31716036 | None:intergenic | 30.0% | |
| TATCTGGACAAACTAAATGT+GGG | - | chr5_1:31716212-31716231 | Msa0728070:five_prime_UTR | 30.0% | |
| CTTTCATTGTTGTAGGCAAA+GGG | + | chr5_1:31707950-31707969 | None:intergenic | 35.0% | |
| !! | TTAAGAAAGGGTACCTTTGT+TGG | + | chr5_1:31708060-31708079 | None:intergenic | 35.0% |
| TGAAGAACCAATGAGCAAAT+AGG | - | chr5_1:31708217-31708236 | Msa0728070:intron | 35.0% | |
| CATCTATCCTATTTGCTCAT+TGG | + | chr5_1:31708227-31708246 | None:intergenic | 35.0% | |
| ! | TAATTTTACAGAACACACGG+TGG | + | chr5_1:31708287-31708306 | None:intergenic | 35.0% |
| !! | GTAATTATAGGTGTTGGTGT+CGG | - | chr5_1:31708394-31708413 | Msa0728070:intron | 35.0% |
| !! | GTAATTATAGGTGTTGGTGT+CGG | - | chr5_1:31708394-31708413 | Msa0728070:intron | 35.0% |
| TCATTAAAGTGGAGTGTAAG+GGG | + | chr5_1:31708684-31708703 | None:intergenic | 35.0% | |
| TCCACTTTAATGATATGACG+TGG | - | chr5_1:31708691-31708710 | Msa0728070:intron | 35.0% | |
| TCCACGTCATATCATTAAAG+TGG | + | chr5_1:31708695-31708714 | None:intergenic | 35.0% | |
| AACAATGGTTGAAAAGATGG+TGG | - | chr5_1:31708827-31708846 | Msa0728070:intron | 35.0% | |
| AAACCTAGACTTAGGTGATT+TGG | - | chr5_1:31708850-31708869 | Msa0728070:intron | 35.0% | |
| AACCTAGACTTAGGTGATTT+GGG | - | chr5_1:31708851-31708870 | Msa0728070:intron | 35.0% | |
| TTTACGATAGTAACCGTGAA+AGG | - | chr5_1:31708979-31708998 | Msa0728070:intron | 35.0% | |
| TATTTCGATCCAACCTTTCA+CGG | + | chr5_1:31708995-31709014 | None:intergenic | 35.0% | |
| AGGTTGGATCGAAATATGTT+TGG | - | chr5_1:31708999-31709018 | Msa0728070:intron | 35.0% | |
| !! | TAGATTGATTTGTTGGGTGT+TGG | - | chr5_1:31709210-31709229 | Msa0728070:intron | 35.0% |
| ! | TGTTGGTATTGAAAGCAGAT+GGG | - | chr5_1:31709227-31709246 | Msa0728070:intron | 35.0% |
| GAAGAAGCAAGATAAATGAG+AGG | - | chr5_1:31709308-31709327 | Msa0728070:intron | 35.0% | |
| TGATAGAAAGTAACCGTGAA+AGG | - | chr5_1:31709470-31709489 | Msa0728070:CDS | 35.0% | |
| AAGAAATCCATCACCTTTCA+CGG | + | chr5_1:31709486-31709505 | None:intergenic | 35.0% | |
| !!! | CTTGCAGTTTTAAATTGCCA+AGG | - | chr5_1:31709503-31709522 | Msa0728070:intron | 35.0% |
| CAATGAAGGGAAAATATCCT+TGG | + | chr5_1:31709523-31709542 | None:intergenic | 35.0% | |
| !!! | TTGGGTGTTTTGGTTTTGTT+TGG | - | chr5_1:31709597-31709616 | Msa0728070:intron | 35.0% |
| CACATTCACTAACATGAAGA+TGG | + | chr5_1:31709642-31709661 | None:intergenic | 35.0% | |
| ! | CCTCAATATTTGGAATCTGA+AGG | + | chr5_1:31710007-31710026 | None:intergenic | 35.0% |
| CCTTCAGATTCCAAATATTG+AGG | - | chr5_1:31710004-31710023 | Msa0728070:intron | 35.0% | |
| GTATGAGATCCCTCAATATT+TGG | + | chr5_1:31710017-31710036 | None:intergenic | 35.0% | |
| TACCTCAATGTGATCAAAAG+AGG | - | chr5_1:31710034-31710053 | Msa0728070:intron | 35.0% | |
| ACCTCAATGTGATCAAAAGA+GGG | - | chr5_1:31710035-31710054 | Msa0728070:intron | 35.0% | |
| CACAGCTTCATTCTTATTAG+AGG | - | chr5_1:31710059-31710078 | Msa0728070:intron | 35.0% | |
| TGAGTATGTTCAGTACTTAC+AGG | - | chr5_1:31710183-31710202 | Msa0728070:intron | 35.0% | |
| ! | GAGAGGGTACAAAAATATGA+AGG | - | chr5_1:31710205-31710224 | Msa0728070:intron | 35.0% |
| AAATATGAAGGCTCGTATCA+AGG | - | chr5_1:31710217-31710236 | Msa0728070:intron | 35.0% | |
| ACAAATAGTTGTGGCCAATT+TGG | + | chr5_1:31710699-31710718 | None:intergenic | 35.0% | |
| TGTTAATGGAACCAATTTGC+CGG | - | chr5_1:31710929-31710948 | Msa0728070:intron | 35.0% | |
| ! | AGGTTGACCGACAAAATTTT+GGG | + | chr5_1:31711021-31711040 | None:intergenic | 35.0% |
| CAACCTCCAATTGTAAAGAA+TGG | - | chr5_1:31711035-31711054 | Msa0728070:intron | 35.0% | |
| GAACCATTCTTTACAATTGG+AGG | + | chr5_1:31711041-31711060 | None:intergenic | 35.0% | |
| CCTGAACCATTCTTTACAAT+TGG | + | chr5_1:31711044-31711063 | None:intergenic | 35.0% | |
| CCAATTGTAAAGAATGGTTC+AGG | - | chr5_1:31711041-31711060 | Msa0728070:intron | 35.0% | |
| ! | CTGTTTTCATCAAACTTTCC+GGG | + | chr5_1:31711083-31711102 | None:intergenic | 35.0% |
| ACATTCAGTTGATTGTGCAT+CGG | + | chr5_1:31711309-31711328 | None:intergenic | 35.0% | |
| ATGAACTTACAGTTGAAGGA+GGG | - | chr5_1:31711360-31711379 | Msa0728070:intron | 35.0% | |
| AAGAAAGAACTTCACATGGT+TGG | + | chr5_1:31711569-31711588 | None:intergenic | 35.0% | |
| ! | ATTTTCGATCCGCTAATCAT+TGG | - | chr5_1:31711607-31711626 | Msa0728070:intron | 35.0% |
| TAGCTCAAACCAATGATTAG+CGG | + | chr5_1:31711619-31711638 | None:intergenic | 35.0% | |
| GAGTGTATTGTGGAAAATAG+CGG | + | chr5_1:31712193-31712212 | None:intergenic | 35.0% | |
| ATTACACGTAGAGTGTATTG+TGG | + | chr5_1:31712203-31712222 | None:intergenic | 35.0% | |
| ! | ATGTCATCTAAGGTATGTCT+AGG | + | chr5_1:31712239-31712258 | None:intergenic | 35.0% |
| AGACATACCTTAGATGACAT+TGG | - | chr5_1:31712239-31712258 | Msa0728070:intron | 35.0% | |
| CACTAAACCAATGTCATCTA+AGG | + | chr5_1:31712249-31712268 | None:intergenic | 35.0% | |
| ! | ATCTTGTTGTAGTTGCAGTA+TGG | + | chr5_1:31712283-31712302 | None:intergenic | 35.0% |
| TAGGATGTCAAATGCATATG+TGG | + | chr5_1:31712351-31712370 | None:intergenic | 35.0% | |
| AGTTTCAACTCATCAGAGTT+AGG | + | chr5_1:31712516-31712535 | None:intergenic | 35.0% | |
| ! | TGTGTGAGTGCTGTAAAATT+TGG | - | chr5_1:31712607-31712626 | Msa0728070:CDS | 35.0% |
| ACATAAGTAGCAATCGAACT+CGG | + | chr5_1:31712639-31712658 | None:intergenic | 35.0% | |
| GGATGAATTGACAAATCACT+AGG | + | chr5_1:31712672-31712691 | None:intergenic | 35.0% | |
| TTGTCAATTCATCCATTGCT+AGG | - | chr5_1:31712678-31712697 | Msa0728070:CDS | 35.0% | |
| AACGGGTACATTTACGAATT+TGG | - | chr5_1:31712794-31712813 | Msa0728070:CDS | 35.0% | |
| ! | AATTTCTTTTCAGTAACCGC+TGG | + | chr5_1:31712849-31712868 | None:intergenic | 35.0% |
| ! | GTTCCATTTTCCAATGTCAA+CGG | + | chr5_1:31712902-31712921 | None:intergenic | 35.0% |
| TGTATTGTGAACCTATCTCA+TGG | - | chr5_1:31713382-31713401 | Msa0728070:intron | 35.0% | |
| AAACTAATGGCCAAATTCAC+AGG | + | chr5_1:31713408-31713427 | None:intergenic | 35.0% | |
| !!! | GCCATTAGTTTTCAATTGTG+AGG | - | chr5_1:31713417-31713436 | Msa0728070:intron | 35.0% |
| GCCTCACAATTGAAAACTAA+TGG | + | chr5_1:31713421-31713440 | None:intergenic | 35.0% | |
| ! | TTGTGAGGCTATGTTCATTT+TGG | - | chr5_1:31713432-31713451 | Msa0728070:intron | 35.0% |
| AAATAGACAAATCACAAGGC+CGG | + | chr5_1:31713469-31713488 | None:intergenic | 35.0% | |
| CATAGAAAGATCAGAATCGA+TGG | + | chr5_1:31713494-31713513 | None:intergenic | 35.0% | |
| GCATCACAATTCAAAGTTGA+TGG | + | chr5_1:31713567-31713586 | None:intergenic | 35.0% | |
| AAGTAACTGTAATGCTCCTT+TGG | - | chr5_1:31713638-31713657 | Msa0728070:intron | 35.0% | |
| ! | GCAATGTAATATAGCGGAAT+TGG | + | chr5_1:31713733-31713752 | None:intergenic | 35.0% |
| ACAAGCCGCTATTATTATGT+GGG | + | chr5_1:31713803-31713822 | None:intergenic | 35.0% | |
| AAGTAACTGTAATGCTCCTT+TGG | - | chr5_1:31713638-31713657 | Msa0728070:intron | 35.0% | |
| ! | GCAATGTAATATAGCGGAAT+TGG | + | chr5_1:31713733-31713752 | None:intergenic | 35.0% |
| GACAAACCGCTATTATTATG+TGG | + | chr5_1:31714243-31714262 | None:intergenic | 35.0% | |
| CATCATACTCCTATGTACTA+AGG | - | chr5_1:31714934-31714953 | Msa0728070:intron | 35.0% | |
| ACCTTCAAAACTCACTAACA+TGG | - | chr5_1:31715240-31715259 | Msa0728070:intron | 35.0% | |
| !! | ACCATGTTAGTGAGTTTTGA+AGG | + | chr5_1:31715244-31715263 | None:intergenic | 35.0% |
| !! | TAACATGGTGTTGTAAGAGT+GGG | - | chr5_1:31715255-31715274 | Msa0728070:intron | 35.0% |
| GGTTGTTAGACTGAAAGATT+TGG | - | chr5_1:31715509-31715528 | Msa0728070:intron | 35.0% | |
| ATAGAGGGTTATCATGATTC+TGG | + | chr5_1:31715809-31715828 | None:intergenic | 35.0% | |
| !! | TTTGCACATTTTAGAGATGG+TGG | - | chr5_1:31715843-31715862 | Msa0728070:intron | 35.0% |
| AGGATTTACAGTAACCACAA+GGG | + | chr5_1:31715991-31716010 | None:intergenic | 35.0% | |
| AAGGATTTACAGTAACCACA+AGG | + | chr5_1:31715992-31716011 | None:intergenic | 35.0% | |
| ! | TTTGCAGCTTTAGTCATGAA+AGG | + | chr5_1:31716037-31716056 | None:intergenic | 35.0% |
| GTATCTGGACAAACTAAATG+TGG | - | chr5_1:31716211-31716230 | Msa0728070:five_prime_UTR | 35.0% | |
| ATATCTAATGCCCGAAATCT+TGG | - | chr5_1:31716244-31716263 | Msa0728070:five_prime_UTR | 35.0% | |
| AGAGAAAGAGGAATTGGGTT+TGG | + | chr5_1:31707827-31707846 | None:intergenic | 40.0% | |
| GCTTTCATTGTTGTAGGCAA+AGG | + | chr5_1:31707951-31707970 | None:intergenic | 40.0% | |
| TTGCCTACAACAATGAAAGC+AGG | - | chr5_1:31707951-31707970 | Msa0728070:three_prime_UTR | 40.0% | |
| TGCCTACAACAATGAAAGCA+GGG | - | chr5_1:31707952-31707971 | Msa0728070:three_prime_UTR | 40.0% | |
| TTCCCTGCTTTCATTGTTGT+AGG | + | chr5_1:31707957-31707976 | None:intergenic | 40.0% | |
| CTTATTCCACTATGTGGTGT+CGG | + | chr5_1:31709099-31709118 | None:intergenic | 40.0% | |
| ! | GTGTTGGTATTGAAAGCAGA+TGG | - | chr5_1:31709226-31709245 | Msa0728070:intron | 40.0% |
| AGATGGGAAAGCTACTGATA+AGG | - | chr5_1:31709243-31709262 | Msa0728070:intron | 40.0% | |
| AAAGTAACCGTGAAAGGTGA+TGG | - | chr5_1:31709476-31709495 | Msa0728070:CDS | 40.0% | |
| ! | TCCCTCTTTTGATCACATTG+AGG | + | chr5_1:31710039-31710058 | None:intergenic | 40.0% |
| AGAATAACTCTCAGAACCTG+TGG | - | chr5_1:31710134-31710153 | Msa0728070:intron | 40.0% | |
| ATGTTCAGTACTTACAGGAG+AGG | - | chr5_1:31710188-31710207 | Msa0728070:intron | 40.0% | |
| TGTTCAGTACTTACAGGAGA+GGG | - | chr5_1:31710189-31710208 | Msa0728070:intron | 40.0% | |
| TCTTCATCAATCCATCTAGG+TGG | + | chr5_1:31710428-31710447 | None:intergenic | 40.0% | |
| GTATCTGCCTAAATGCTTTC+TGG | - | chr5_1:31710538-31710557 | Msa0728070:intron | 40.0% | |
| ! | GAGGTTGACCGACAAAATTT+TGG | + | chr5_1:31711022-31711041 | None:intergenic | 40.0% |
| TCATCAAACTTTCCGGGAAA+CGG | + | chr5_1:31711077-31711096 | None:intergenic | 40.0% | |
| ATCTCTCCAACAATGCATAG+TGG | - | chr5_1:31711110-31711129 | Msa0728070:intron | 40.0% | |
| ATGTTTGCATGCATAGCCAT+AGG | + | chr5_1:31711230-31711249 | None:intergenic | 40.0% | |
| ! | TTGAGTTGTTCACTCGTTGT+GGG | + | chr5_1:31711332-31711351 | None:intergenic | 40.0% |
| CAGGATGAACTTACAGTTGA+AGG | - | chr5_1:31711356-31711375 | Msa0728070:intron | 40.0% | |
| GATGAACTTACAGTTGAAGG+AGG | - | chr5_1:31711359-31711378 | Msa0728070:intron | 40.0% | |
| TGTGGAAAATAGCGGCATAA+CGG | + | chr5_1:31712185-31712204 | None:intergenic | 40.0% | |
| AGTCGAGTGCTAAACTAGTA+AGG | + | chr5_1:31712328-31712347 | None:intergenic | 40.0% | |
| TCAACTCATCAGAGTTAGGT+TGG | + | chr5_1:31712512-31712531 | None:intergenic | 40.0% | |
| ! | GTGAGTGCTGTAAAATTTGG+AGG | - | chr5_1:31712610-31712629 | Msa0728070:CDS | 40.0% |
| TTTGTAGGAAACAGAACCAG+CGG | - | chr5_1:31712830-31712849 | Msa0728070:CDS | 40.0% | |
| ATAAGCTACTCCGTTGACAT+TGG | - | chr5_1:31712889-31712908 | Msa0728070:CDS | 40.0% | |
| ACTCCGTTGACATTGGAAAA+TGG | - | chr5_1:31712896-31712915 | Msa0728070:CDS | 40.0% | |
| AGTTAACAGAAGTCCCACAT+CGG | + | chr5_1:31713141-31713160 | None:intergenic | 40.0% | |
| AAATTCACAGGCCATGAGAT+AGG | + | chr5_1:31713396-31713415 | None:intergenic | 40.0% | |
| TATCTCATGGCCTGTGAATT+TGG | - | chr5_1:31713395-31713414 | Msa0728070:intron | 40.0% | |
| !! | AGGCTATGTTCATTTTGGTC+TGG | - | chr5_1:31713437-31713456 | Msa0728070:intron | 40.0% |
| !! | CATTTTGGTCTGGTAAGTTC+CGG | - | chr5_1:31713447-31713466 | Msa0728070:intron | 40.0% |
| ACTGTAATGCTCCTTTGGTT+CGG | - | chr5_1:31713643-31713662 | Msa0728070:intron | 40.0% | |
| CAATGAGCAAGGTTAACCTT+GGG | + | chr5_1:31713674-31713693 | None:intergenic | 40.0% | |
| ACAATGAGCAAGGTTAACCT+TGG | + | chr5_1:31713675-31713694 | None:intergenic | 40.0% | |
| TTGCTCATTGTTGTCAACCA+CGG | - | chr5_1:31713684-31713703 | Msa0728070:intron | 40.0% | |
| CACGTCCCACATAATAATAG+CGG | - | chr5_1:31713795-31713814 | Msa0728070:intron | 40.0% | |
| GACAAGCCGCTATTATTATG+TGG | + | chr5_1:31713804-31713823 | None:intergenic | 40.0% | |
| ACTGTAATGCTCCTTTGGTT+CGG | - | chr5_1:31713643-31713662 | Msa0728070:intron | 40.0% | |
| CAATGAGCAAGGTTAACCTT+GGG | + | chr5_1:31713674-31713693 | None:intergenic | 40.0% | |
| ACAATGAGCAAGGTTAACCT+TGG | + | chr5_1:31713675-31713694 | None:intergenic | 40.0% | |
| TTGCTCATTGTTGTCAACCA+CGG | - | chr5_1:31713684-31713703 | Msa0728070:intron | 40.0% | |
| CACGTCCCACATAATAATAG+CGG | - | chr5_1:31713795-31713814 | Msa0728070:intron | 40.0% | |
| ATCTCCCAAGGTATACAGAA+TGG | - | chr5_1:31714588-31714607 | Msa0728070:intron | 40.0% | |
| AAGGCCATTCTGTATACCTT+GGG | + | chr5_1:31714595-31714614 | None:intergenic | 40.0% | |
| AAAGGCCATTCTGTATACCT+TGG | + | chr5_1:31714596-31714615 | None:intergenic | 40.0% | |
| TAGACGCCTTGCCAATTAAA+AGG | + | chr5_1:31714639-31714658 | None:intergenic | 40.0% | |
| ! | TAGGTTTGAAGGTGTAACCA+TGG | - | chr5_1:31714844-31714863 | Msa0728070:intron | 40.0% |
| TCTCATGCATTGGATAACCA+TGG | + | chr5_1:31714864-31714883 | None:intergenic | 40.0% | |
| GCAAAATGCAAAGGCAATCT+TGG | + | chr5_1:31715011-31715030 | None:intergenic | 40.0% | |
| CTGAGAACAGCAAAATGCAA+AGG | + | chr5_1:31715020-31715039 | None:intergenic | 40.0% | |
| !! | CTAACATGGTGTTGTAAGAG+TGG | - | chr5_1:31715254-31715273 | Msa0728070:intron | 40.0% |
| CTTGTCCAAGAAAAGGACTA+AGG | - | chr5_1:31715288-31715307 | Msa0728070:intron | 40.0% | |
| ! | TCGAACCTTAGTCCTTTTCT+TGG | + | chr5_1:31715296-31715315 | None:intergenic | 40.0% |
| !! | TTGCGGGTTAGTATCATAGA+GGG | - | chr5_1:31715365-31715384 | Msa0728070:intron | 40.0% |
| AGTAGAAGGATAGTGACGAA+AGG | - | chr5_1:31715589-31715608 | Msa0728070:intron | 40.0% | |
| CAGTAACCACAAGGGATTAA+GGG | + | chr5_1:31715983-31716002 | None:intergenic | 40.0% | |
| ACAGTAACCACAAGGGATTA+AGG | + | chr5_1:31715984-31716003 | None:intergenic | 40.0% | |
| TAAGCTCAAACAAATGGGGA+AGG | + | chr5_1:31716011-31716030 | None:intergenic | 40.0% | |
| GGGGAAAGTAAGTTAGCATG+TGG | + | chr5_1:31707717-31707736 | None:intergenic | 45.0% | |
| AACTTACTTTCCCCTCTCTC+CGG | - | chr5_1:31707723-31707742 | Msa0728070:three_prime_UTR | 45.0% | |
| ! | GGTTTGGAACGAACCTGAAA+GGG | + | chr5_1:31707811-31707830 | None:intergenic | 45.0% |
| !! | GGTACCTTTGTTGGTGTTAG+GGG | + | chr5_1:31708051-31708070 | None:intergenic | 45.0% |
| !! | GGGTACCTTTGTTGGTGTTA+GGG | + | chr5_1:31708052-31708071 | None:intergenic | 45.0% |
| ! | AGGGTACCTTTGTTGGTGTT+AGG | + | chr5_1:31708053-31708072 | None:intergenic | 45.0% |
| TTGTCGGACTGAATTCGGTT+CGG | - | chr5_1:31708180-31708199 | Msa0728070:intron | 45.0% | |
| ACAGAACACACGGTGGTTAT+TGG | + | chr5_1:31708280-31708299 | None:intergenic | 45.0% | |
| ATGCGTGCTTTGTAGGTAGA+AGG | + | chr5_1:31708310-31708329 | None:intergenic | 45.0% | |
| CTACCTACAAAGCACGCATA+TGG | - | chr5_1:31708311-31708330 | Msa0728070:intron | 45.0% | |
| TGTCCATATGCGTGCTTTGT+AGG | + | chr5_1:31708317-31708336 | None:intergenic | 45.0% | |
| ACACGATACATGTCAGACAC+CGG | - | chr5_1:31708622-31708641 | Msa0728070:intron | 45.0% | |
| ! | TCTTCGGATTAGGTGTATCC+CGG | + | chr5_1:31708644-31708663 | None:intergenic | 45.0% |
| TATGAAGCACGGACACTCTT+CGG | + | chr5_1:31708660-31708679 | None:intergenic | 45.0% | |
| !! | GATGGTGGAAACCTAGACTT+AGG | - | chr5_1:31708842-31708861 | Msa0728070:intron | 45.0% |
| TGCCCAAATCACCTAAGTCT+AGG | + | chr5_1:31708856-31708875 | None:intergenic | 45.0% | |
| CGATAGTAACCGTGAAAGGT+TGG | - | chr5_1:31708983-31709002 | Msa0728070:intron | 45.0% | |
| ! | CGACACCACATAGTGGAATA+AGG | - | chr5_1:31709097-31709116 | Msa0728070:intron | 45.0% |
| !! | CCAAGCCTTATTCCACTATG+TGG | + | chr5_1:31709105-31709124 | None:intergenic | 45.0% |
| ! | CCACATAGTGGAATAAGGCT+TGG | - | chr5_1:31709102-31709121 | Msa0728070:intron | 45.0% |
| ! | AACATTCTGTAACGGAGCAG+CGG | - | chr5_1:31709284-31709303 | Msa0728070:intron | 45.0% |
| !! | TGCGAGCATTTTGGGTGTTT+TGG | - | chr5_1:31709587-31709606 | Msa0728070:intron | 45.0% |
| AACTTACCCGCAAAACCTAG+TGG | - | chr5_1:31709860-31709879 | Msa0728070:intron | 45.0% | |
| ACTTACCCGCAAAACCTAGT+GGG | - | chr5_1:31709861-31709880 | Msa0728070:intron | 45.0% | |
| CAGATACTAAGCCACCTAGA+TGG | - | chr5_1:31710414-31710433 | Msa0728070:intron | 45.0% | |
| CTGTCCTCACTCTTAGTTAC+CGG | - | chr5_1:31710501-31710520 | Msa0728070:intron | 45.0% | |
| ! | CAAAATTTTGGGCACGCCAA+TGG | + | chr5_1:31711010-31711029 | None:intergenic | 45.0% |
| ! | TGGCGTGCCCAAAATTTTGT+CGG | - | chr5_1:31711011-31711030 | Msa0728070:intron | 45.0% |
| TGATAGATCACGATCCGACT+CGG | - | chr5_1:31711144-31711163 | Msa0728070:intron | 45.0% | |
| TCTGTTCCTGTCAGAAGTGA+TGG | - | chr5_1:31711251-31711270 | Msa0728070:intron | 45.0% | |
| AGTACACCATCACTTCTGAC+AGG | + | chr5_1:31711260-31711279 | None:intergenic | 45.0% | |
| TGTACTTTCCCATCCTCTTC+AGG | - | chr5_1:31711274-31711293 | Msa0728070:intron | 45.0% | |
| GTACTTTCCCATCCTCTTCA+GGG | - | chr5_1:31711275-31711294 | Msa0728070:intron | 45.0% | |
| AACAGTTCCCTGAAGAGGAT+GGG | + | chr5_1:31711285-31711304 | None:intergenic | 45.0% | |
| AAACAGTTCCCTGAAGAGGA+TGG | + | chr5_1:31711286-31711305 | None:intergenic | 45.0% | |
| ! | GTTGAGTTGTTCACTCGTTG+TGG | + | chr5_1:31711333-31711352 | None:intergenic | 45.0% |
| CAACTGTAAGTTCATCCTGC+TGG | + | chr5_1:31711355-31711374 | None:intergenic | 45.0% | |
| ATCTCGAGTGTATACTCCCA+AGG | - | chr5_1:31711392-31711411 | Msa0728070:intron | 45.0% | |
| TCTCGAGTGTATACTCCCAA+GGG | - | chr5_1:31711393-31711412 | Msa0728070:intron | 45.0% | |
| ATTCACCTCATTGGCGTCTT+GGG | + | chr5_1:31712486-31712505 | None:intergenic | 45.0% | |
| ! | GGTTGGTTCATTCACCTCAT+TGG | + | chr5_1:31712495-31712514 | None:intergenic | 45.0% |
| TGGATTCGGCTAGTACAAGT+AGG | + | chr5_1:31712543-31712562 | None:intergenic | 45.0% | |
| TTCGTAAATGTACCCGTTCG+CGG | + | chr5_1:31712792-31712811 | None:intergenic | 45.0% | |
| ACACACACAACATGAGGTCT+AGG | + | chr5_1:31713001-31713020 | None:intergenic | 45.0% | |
| ACACACACACACACAACATG+AGG | + | chr5_1:31713007-31713026 | None:intergenic | 45.0% | |
| CTCTGAGTTGTGAACCTATC+TGG | - | chr5_1:31713525-31713544 | Msa0728070:intron | 45.0% | |
| GTGGTTGACAACAATGAGCA+AGG | + | chr5_1:31713685-31713704 | None:intergenic | 45.0% | |
| ! | TTGTTGTCAACCACGGATTG+TGG | - | chr5_1:31713691-31713710 | Msa0728070:intron | 45.0% |
| !!! | TTGCTGTTTTCCACAATCCG+TGG | + | chr5_1:31713704-31713723 | None:intergenic | 45.0% |
| GTGGTTGACAACAATGAGCA+AGG | + | chr5_1:31713685-31713704 | None:intergenic | 45.0% | |
| ! | TTGTTGTCAACCACGGATTG+TGG | - | chr5_1:31713691-31713710 | Msa0728070:intron | 45.0% |
| !!! | TTGCTGTTTTCCACAATCCG+TGG | + | chr5_1:31713704-31713723 | None:intergenic | 45.0% |
| ! | TGCTGGGTTAGATCTGTCAA+AGG | - | chr5_1:31714501-31714520 | Msa0728070:intron | 45.0% |
| TCTGTATACCTTGGGAGATG+AGG | + | chr5_1:31714587-31714606 | None:intergenic | 45.0% | |
| !! | CTTGCGGGTTAGTATCATAG+AGG | - | chr5_1:31715364-31715383 | Msa0728070:intron | 45.0% |
| TTCTCTCCCTTAATCCCTTG+TGG | - | chr5_1:31715974-31715993 | Msa0728070:CDS | 45.0% | |
| ! | GGTTATTTGGTGGGTGTATC+TGG | - | chr5_1:31716196-31716215 | Msa0728070:five_prime_UTR | 45.0% |
| !! | AAAAAAAAAAAAAAAAATAG+AGG | + | chr5_1:31713891-31713910 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTACAAAA+TGG | - | chr5_1:31713898-31713917 | Msa0728070:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTACAAAA+TGG | - | chr5_1:31713898-31713917 | Msa0728070:CDS | 5.0% |
| CATGTGGTTCGACTCATGCT+TGG | + | chr5_1:31707701-31707720 | None:intergenic | 50.0% | |
| ! | TACTCATGTCCTTTTCCCGC+CGG | - | chr5_1:31707757-31707776 | Msa0728070:three_prime_UTR | 50.0% |
| GAAAGGGTGATGATCTACGC+CGG | + | chr5_1:31707795-31707814 | None:intergenic | 50.0% | |
| GCGTAGATCATCACCCTTTC+AGG | - | chr5_1:31707795-31707814 | Msa0728070:three_prime_UTR | 50.0% | |
| ! | GGGTTTGGAACGAACCTGAA+AGG | + | chr5_1:31707812-31707831 | None:intergenic | 50.0% |
| !! | TTTGTTGGTGTTAGGGGCAG+AGG | + | chr5_1:31708045-31708064 | None:intergenic | 50.0% |
| TCTGCCCCTAACACCAACAA+AGG | - | chr5_1:31708044-31708063 | Msa0728070:exon | 50.0% | |
| CACTGACACGACACATACAC+TGG | - | chr5_1:31708435-31708454 | Msa0728070:intron | 50.0% | |
| CACGATACATGTCAGACACC+GGG | - | chr5_1:31708623-31708642 | Msa0728070:intron | 50.0% | |
| GTGTAAGGGGCTATGAAGCA+CGG | + | chr5_1:31708671-31708690 | None:intergenic | 50.0% | |
| ATGTAGCCGACACCACATAG+TGG | - | chr5_1:31709090-31709109 | Msa0728070:intron | 50.0% | |
| ! | TCCTTCCCACTAGGTTTTGC+GGG | + | chr5_1:31709869-31709888 | None:intergenic | 50.0% |
| ! | GTCCTTCCCACTAGGTTTTG+CGG | + | chr5_1:31709870-31709889 | None:intergenic | 50.0% |
| CAACACAAGTCCTTCCCACT+AGG | + | chr5_1:31709878-31709897 | None:intergenic | 50.0% | |
| AACTCTCAGAACCTGTGGAC+TGG | - | chr5_1:31710139-31710158 | Msa0728070:intron | 50.0% | |
| GAGAAACATGACCAGTCCAC+AGG | + | chr5_1:31710153-31710172 | None:intergenic | 50.0% | |
| ! | GACTGGTCATGTTTCTCTGC+AGG | - | chr5_1:31710156-31710175 | Msa0728070:intron | 50.0% |
| ATGAAGGCTCGTATCAAGGC+TGG | - | chr5_1:31710221-31710240 | Msa0728070:intron | 50.0% | |
| !! | AACCGTCGAAGTTGATGCCA+TGG | - | chr5_1:31710251-31710270 | Msa0728070:intron | 50.0% |
| !! | ACCGTCGAAGTTGATGCCAT+GGG | - | chr5_1:31710252-31710271 | Msa0728070:intron | 50.0% |
| ACCCATGGCATCAACTTCGA+CGG | + | chr5_1:31710256-31710275 | None:intergenic | 50.0% | |
| TGGACCGGTAACTAAGAGTG+AGG | + | chr5_1:31710508-31710527 | None:intergenic | 50.0% | |
| TTTCCGGGAAACGGTGATAC+TGG | + | chr5_1:31711068-31711087 | None:intergenic | 50.0% | |
| TGGGAGCCACTATGCATTGT+TGG | + | chr5_1:31711119-31711138 | None:intergenic | 50.0% | |
| GATAGATCACGATCCGACTC+GGG | - | chr5_1:31711145-31711164 | Msa0728070:intron | 50.0% | |
| !! | GATCCGACTCGGGATATTGT+CGG | - | chr5_1:31711155-31711174 | Msa0728070:intron | 50.0% |
| TTGCCGACAATATCCCGAGT+CGG | + | chr5_1:31711161-31711180 | None:intergenic | 50.0% | |
| TCGGGATATTGTCGGCAAGA+CGG | - | chr5_1:31711163-31711182 | Msa0728070:intron | 50.0% | |
| !! | CAACCTGATTTGGCGAGCAA+GGG | - | chr5_1:31711194-31711213 | Msa0728070:intron | 50.0% |
| ATTCCCTTGCTCGCCAAATC+AGG | + | chr5_1:31711200-31711219 | None:intergenic | 50.0% | |
| CAAGGGAATTCCTCTGCCTA+TGG | - | chr5_1:31711211-31711230 | Msa0728070:intron | 50.0% | |
| TCGGAAACAGTTCCCTGAAG+AGG | + | chr5_1:31711290-31711309 | None:intergenic | 50.0% | |
| GAGTGAACAACTCAACCAGC+AGG | - | chr5_1:31711337-31711356 | Msa0728070:intron | 50.0% | |
| TAACCTAGCCACTGAGCAAC+TGG | + | chr5_1:31711850-31711869 | None:intergenic | 50.0% | |
| ATGAACCCAAGACGCCAATG+AGG | - | chr5_1:31712478-31712497 | Msa0728070:intron | 50.0% | |
| CATTCACCTCATTGGCGTCT+TGG | + | chr5_1:31712487-31712506 | None:intergenic | 50.0% | |
| ACCCTCAGTGGAGTTGGATT+CGG | + | chr5_1:31712557-31712576 | None:intergenic | 50.0% | |
| ACACCTTACGAACCGCGAAT+TGG | - | chr5_1:31712757-31712776 | Msa0728070:CDS | 50.0% | |
| GTACCAATTCGCGGTTCGTA+AGG | + | chr5_1:31712763-31712782 | None:intergenic | 50.0% | |
| CGTTGTATCGTGCACGTTGT+GGG | + | chr5_1:31712961-31712980 | None:intergenic | 50.0% | |
| CTTGGGAAAGTCCGAACCAA+AGG | + | chr5_1:31713657-31713676 | None:intergenic | 50.0% | |
| !! | CTTTGGTTCGGACTTTCCCA+AGG | - | chr5_1:31713655-31713674 | Msa0728070:intron | 50.0% |
| CTTGGGAAAGTCCGAACCAA+AGG | + | chr5_1:31713657-31713676 | None:intergenic | 50.0% | |
| !! | CTTTGGTTCGGACTTTCCCA+AGG | - | chr5_1:31713655-31713674 | Msa0728070:intron | 50.0% |
| ! | TCTTGGGAAGCGTGCAAAGA+AGG | - | chr5_1:31714546-31714565 | Msa0728070:intron | 50.0% |
| CGTGCAAAGAAGGATCCAAG+TGG | - | chr5_1:31714556-31714575 | Msa0728070:intron | 50.0% | |
| TTCATGAGCTCGGGTTCTGT+AGG | + | chr5_1:31715391-31715410 | None:intergenic | 50.0% | |
| ATTGAGCGCTTCATGAGCTC+GGG | + | chr5_1:31715400-31715419 | None:intergenic | 50.0% | |
| CATTGAGCGCTTCATGAGCT+CGG | + | chr5_1:31715401-31715420 | None:intergenic | 50.0% | |
| CATGAGTAACCAACCAGCGC+CGG | + | chr5_1:31707745-31707764 | None:intergenic | 55.0% | |
| TGAGTTTCTCCGGCGGGAAA+AGG | + | chr5_1:31707769-31707788 | None:intergenic | 55.0% | |
| !! | CTGAATTCGGTTCGGCTGCA+AGG | - | chr5_1:31708188-31708207 | Msa0728070:intron | 55.0% |
| GTCGGACACGACACAAACAC+TGG | - | chr5_1:31708412-31708431 | Msa0728070:intron | 55.0% | |
| !! | ATACACTGGCACTGACACGC+TGG | - | chr5_1:31708449-31708468 | Msa0728070:intron | 55.0% |
| ! | ACCTTGCACTGACACGACAC+TGG | - | chr5_1:31708535-31708554 | Msa0728070:intron | 55.0% |
| GCACGGACACTCTTCGGATT+AGG | + | chr5_1:31708654-31708673 | None:intergenic | 55.0% | |
| ACCCGCAAAACCTAGTGGGA+AGG | - | chr5_1:31709865-31709884 | Msa0728070:intron | 55.0% | |
| GGTCCAGTATCACCGTTTCC+CGG | - | chr5_1:31711062-31711081 | Msa0728070:intron | 55.0% | |
| GGATATTGTCGGCAAGACGG+TGG | - | chr5_1:31711166-31711185 | Msa0728070:intron | 55.0% | |
| GGTGGAGAGGCAACCTGATT+TGG | - | chr5_1:31711184-31711203 | Msa0728070:intron | 55.0% | |
| !! | GCAACCTGATTTGGCGAGCA+AGG | - | chr5_1:31711193-31711212 | Msa0728070:intron | 55.0% |
| GCATGCATAGCCATAGGCAG+AGG | + | chr5_1:31711224-31711243 | None:intergenic | 55.0% | |
| ! | AGCAACTGGCGGATCTCACA+GGG | + | chr5_1:31711836-31711855 | None:intergenic | 55.0% |
| GCGGCATAACGGCGTTATAC+CGG | + | chr5_1:31712174-31712193 | None:intergenic | 55.0% | |
| AGCCGAATCCAACTCCACTG+AGG | - | chr5_1:31712552-31712571 | Msa0728070:intron | 55.0% | |
| GCCGAATCCAACTCCACTGA+GGG | - | chr5_1:31712553-31712572 | Msa0728070:intron | 55.0% | |
| TGCTAGACCCTCAGTGGAGT+TGG | + | chr5_1:31712563-31712582 | None:intergenic | 55.0% | |
| CACATGTGCTAGACCCTCAG+TGG | + | chr5_1:31712569-31712588 | None:intergenic | 55.0% | |
| CACTGAGGGTCTAGCACATG+TGG | - | chr5_1:31712567-31712586 | Msa0728070:CDS | 55.0% | |
| GAGGGTCTAGCACATGTGGT+TGG | - | chr5_1:31712571-31712590 | Msa0728070:CDS | 55.0% | |
| ACGAACCGCGAATTGGTACC+AGG | - | chr5_1:31712764-31712783 | Msa0728070:CDS | 55.0% | |
| CGGTACCTGGTACCAATTCG+CGG | + | chr5_1:31712772-31712791 | None:intergenic | 55.0% | |
| ! | TTGGTACCAGGTACCGCGAA+CGG | - | chr5_1:31712776-31712795 | Msa0728070:CDS | 55.0% |
| GCGTTGTATCGTGCACGTTG+TGG | + | chr5_1:31712962-31712981 | None:intergenic | 55.0% | |
| ACTCAAGCGCTACAGAGTGC+TGG | - | chr5_1:31714484-31714503 | Msa0728070:intron | 55.0% | |
| ! | CTCAAGCGCTACAGAGTGCT+GGG | - | chr5_1:31714485-31714504 | Msa0728070:intron | 55.0% |
| ACTAACCCGCAAGCAGACAG+CGG | + | chr5_1:31715357-31715376 | None:intergenic | 55.0% | |
| ! | CGAGCTCATGAAGCGCTCAA+TGG | - | chr5_1:31715399-31715418 | Msa0728070:intron | 55.0% |
| ! | ACGCCGGCGTTGAGTTTCTC+CGG | + | chr5_1:31707779-31707798 | None:intergenic | 60.0% |
| GGTGTTAGGGGCAGAGGAAG+TGG | + | chr5_1:31708039-31708058 | None:intergenic | 60.0% | |
| GCCAGTGTCGTGTCAGTGCA+AGG | + | chr5_1:31708539-31708558 | None:intergenic | 60.0% | |
| TTGTCGGCAAGACGGTGGAG+AGG | - | chr5_1:31711171-31711190 | Msa0728070:intron | 60.0% | |
| ! | GAGCAACTGGCGGATCTCAC+AGG | + | chr5_1:31711837-31711856 | None:intergenic | 60.0% |
| GAGATCCGCCAGTTGCTCAG+TGG | - | chr5_1:31711839-31711858 | Msa0728070:intron | 60.0% | |
| CCTAGCCACTGAGCAACTGG+CGG | + | chr5_1:31711847-31711866 | None:intergenic | 60.0% | |
| ! | TGGTACCAGGTACCGCGAAC+GGG | - | chr5_1:31712777-31712796 | Msa0728070:CDS | 60.0% |
| ATGTACCCGTTCGCGGTACC+TGG | + | chr5_1:31712785-31712804 | None:intergenic | 60.0% | |
| ! | GGAGATGAGGCTGTGCCACT+TGG | + | chr5_1:31714574-31714593 | None:intergenic | 60.0% |
| TGGCACAGCCTCATCTCCCA+AGG | - | chr5_1:31714576-31714595 | Msa0728070:intron | 60.0% | |
| TAACCCGCAAGCAGACAGCG+GGG | + | chr5_1:31715355-31715374 | None:intergenic | 60.0% | |
| CTAACCCGCAAGCAGACAGC+GGG | + | chr5_1:31715356-31715375 | None:intergenic | 60.0% | |
| ! | ACCAACCAGCGCCGGAGAGA+GGG | + | chr5_1:31707737-31707756 | None:intergenic | 65.0% |
| ! | AACCAACCAGCGCCGGAGAG+AGG | + | chr5_1:31707738-31707757 | None:intergenic | 65.0% |
| ! | CGGCGTTGAGTTTCTCCGGC+GGG | + | chr5_1:31707775-31707794 | None:intergenic | 65.0% |
| ! | CCGGCGTTGAGTTTCTCCGG+CGG | + | chr5_1:31707776-31707795 | None:intergenic | 65.0% |
| CCGCCGGAGAAACTCAACGC+CGG | - | chr5_1:31707773-31707792 | Msa0728070:three_prime_UTR | 65.0% | |
| !! | CGACACTGGCACTGACACGC+TGG | - | chr5_1:31708549-31708568 | Msa0728070:intron | 65.0% |
| CCGCCAGTTGCTCAGTGGCT+AGG | - | chr5_1:31711844-31711863 | Msa0728070:intron | 65.0% | |
| ! | CAAGCAGACAGCGGGGCATC+CGG | + | chr5_1:31715348-31715367 | None:intergenic | 65.0% |
| GATGCCCCGCTGTCTGCTTG+CGG | - | chr5_1:31715348-31715367 | Msa0728070:intron | 65.0% | |
| ATGCCCCGCTGTCTGCTTGC+GGG | - | chr5_1:31715349-31715368 | Msa0728070:intron | 65.0% | |
| CTTTCCCCTCTCTCCGGCGC+TGG | - | chr5_1:31707729-31707748 | Msa0728070:three_prime_UTR | 70.0% | |
| ! | CCAACCAGCGCCGGAGAGAG+GGG | + | chr5_1:31707736-31707755 | None:intergenic | 70.0% |
| !! | CCCCTCTCTCCGGCGCTGGT+TGG | - | chr5_1:31707733-31707752 | Msa0728070:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 31707638 | 31716333 | 31707638 | ID=Msa0728070;Name=Msa0728070 |
| chr5_1 | mRNA | 31707638 | 31716333 | 31707638 | ID=Msa0728070-mRNA-1;Parent=Msa0728070;Name=Msa0728070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=222|1|1|1|0.71|0.62|8|416|335 |
| chr5_1 | exon | 31707638 | 31708161 | 31707638 | ID=Msa0728070-mRNA-1:exon:10403;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31709374 | 31709503 | 31709374 | ID=Msa0728070-mRNA-1:exon:10402;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31712557 | 31712972 | 31712557 | ID=Msa0728070-mRNA-1:exon:10401;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31713698 | 31713793 | 31713698 | ID=Msa0728070-mRNA-1:exon:10400;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31713891 | 31713960 | 31713891 | ID=Msa0728070-mRNA-1:exon:10399;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31714642 | 31714726 | 31714642 | ID=Msa0728070-mRNA-1:exon:10398;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31715906 | 31716051 | 31715906 | ID=Msa0728070-mRNA-1:exon:10397;Parent=Msa0728070-mRNA-1 |
| chr5_1 | exon | 31716155 | 31716333 | 31716155 | ID=Msa0728070-mRNA-1:exon:10396;Parent=Msa0728070-mRNA-1 |
| chr5_1 | five_prime_UTR | 31716155 | 31716333 | 31716155 | ID=Msa0728070-mRNA-1:five_prime_utr;Parent=Msa0728070-mRNA-1 |
| chr5_1 | five_prime_UTR | 31716009 | 31716051 | 31716009 | ID=Msa0728070-mRNA-1:five_prime_utr;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31715906 | 31716008 | 31715906 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31714642 | 31714726 | 31714642 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31713891 | 31713960 | 31713891 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31713698 | 31713793 | 31713698 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31712557 | 31712972 | 31712557 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31709374 | 31709503 | 31709374 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | CDS | 31708054 | 31708161 | 31708054 | ID=Msa0728070-mRNA-1:cds;Parent=Msa0728070-mRNA-1 |
| chr5_1 | three_prime_UTR | 31707638 | 31708053 | 31707638 | ID=Msa0728070-mRNA-1:three_prime_utr;Parent=Msa0728070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
