Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729600 | QDX01717.1 | 99.326 | 445 | 3 | 0 | 1 | 445 | 1 | 445 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729600 | sp|Q6NQK2|NAC8_ARATH | 57.235 | 463 | 163 | 10 | 1 | 443 | 1 | 448 | 1.54e-175 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729600 | A0A6B7JFD4 | 99.326 | 445 | 3 | 0 | 1 | 445 | 1 | 445 | 0.0 | 919 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0729600 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729600 | MtrunA17_Chr5g0422431 | 97.303 | 445 | 12 | 0 | 1 | 445 | 1 | 445 | 0.0 | 901 |
| Msa0729600 | MtrunA17_Chr1g0198751 | 61.667 | 480 | 144 | 8 | 2 | 444 | 4 | 480 | 0.0 | 568 |
| Msa0729600 | MtrunA17_Chr1g0198741 | 51.368 | 329 | 111 | 8 | 114 | 440 | 8 | 289 | 3.82e-94 | 285 |
| Msa0729600 | MtrunA17_Chr7g0227071 | 54.425 | 226 | 79 | 3 | 6 | 219 | 5 | 218 | 5.34e-83 | 264 |
| Msa0729600 | MtrunA17_Chr2g0282871 | 49.402 | 251 | 117 | 4 | 34 | 274 | 27 | 277 | 3.64e-76 | 240 |
| Msa0729600 | MtrunA17_Chr4g0046431 | 58.081 | 198 | 80 | 2 | 36 | 230 | 44 | 241 | 2.51e-75 | 238 |
| Msa0729600 | MtrunA17_Chr8g0389661 | 59.162 | 191 | 68 | 3 | 36 | 218 | 27 | 215 | 6.62e-73 | 237 |
| Msa0729600 | MtrunA17_Chr8g0367761 | 60.556 | 180 | 68 | 2 | 36 | 212 | 44 | 223 | 2.50e-72 | 228 |
| Msa0729600 | MtrunA17_Chr4g0040541 | 55.330 | 197 | 83 | 2 | 32 | 223 | 19 | 215 | 1.99e-68 | 219 |
| Msa0729600 | MtrunA17_Chr2g0324961 | 55.446 | 202 | 86 | 2 | 32 | 229 | 20 | 221 | 5.75e-64 | 207 |
| Msa0729600 | MtrunA17_Chr6g0484441 | 30.168 | 179 | 107 | 6 | 58 | 233 | 5 | 168 | 3.38e-14 | 73.6 |
| Msa0729600 | MtrunA17_Chr1g0147421 | 30.978 | 184 | 104 | 10 | 58 | 234 | 27 | 194 | 2.07e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729600 | AT1G25580.1 | 57.235 | 463 | 163 | 10 | 1 | 443 | 1 | 448 | 1.57e-176 | 501 |
| Msa0729600 | AT3G01600.1 | 55.405 | 222 | 92 | 4 | 5 | 224 | 4 | 220 | 4.40e-78 | 247 |
| Msa0729600 | AT5G14490.2 | 51.600 | 250 | 106 | 6 | 5 | 250 | 4 | 242 | 4.08e-77 | 242 |
| Msa0729600 | AT5G14490.4 | 51.600 | 250 | 106 | 6 | 5 | 250 | 4 | 242 | 4.44e-77 | 244 |
| Msa0729600 | AT5G14490.1 | 51.600 | 250 | 106 | 6 | 5 | 250 | 7 | 245 | 7.88e-77 | 243 |
| Msa0729600 | AT5G14490.3 | 51.600 | 250 | 106 | 6 | 5 | 250 | 7 | 245 | 1.14e-76 | 243 |
| Msa0729600 | AT4G29230.3 | 59.375 | 192 | 67 | 3 | 36 | 218 | 28 | 217 | 2.89e-74 | 239 |
| Msa0729600 | AT4G29230.1 | 59.375 | 192 | 67 | 3 | 36 | 218 | 28 | 217 | 1.04e-73 | 240 |
| Msa0729600 | AT4G29230.2 | 59.375 | 192 | 66 | 3 | 36 | 218 | 28 | 216 | 1.82e-73 | 239 |
| Msa0729600 | AT4G28500.1 | 51.556 | 225 | 103 | 4 | 5 | 223 | 2 | 226 | 4.01e-72 | 230 |
| Msa0729600 | AT1G28470.1 | 51.598 | 219 | 97 | 3 | 14 | 223 | 25 | 243 | 2.08e-71 | 228 |
| Msa0729600 | AT5G56620.3 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 7.76e-68 | 222 |
| Msa0729600 | AT5G56620.2 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 7.84e-68 | 222 |
| Msa0729600 | AT5G56620.1 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 1.34e-67 | 221 |
| Msa0729600 | AT3G18400.1 | 30.588 | 170 | 95 | 8 | 58 | 221 | 5 | 157 | 9.42e-14 | 72.4 |
| Msa0729600 | AT1G01720.1 | 25.784 | 287 | 161 | 13 | 58 | 324 | 7 | 261 | 3.47e-13 | 70.5 |
| Msa0729600 | AT3G12910.1 | 31.544 | 149 | 86 | 5 | 61 | 206 | 24 | 159 | 2.17e-11 | 65.1 |
| Msa0729600 | AT1G02220.1 | 31.250 | 160 | 90 | 6 | 59 | 215 | 4 | 146 | 2.71e-11 | 65.5 |
| Msa0729600 | AT1G33060.1 | 29.341 | 167 | 96 | 7 | 57 | 216 | 23 | 174 | 5.58e-11 | 65.1 |
| Msa0729600 | AT1G33060.2 | 29.341 | 167 | 96 | 7 | 57 | 216 | 23 | 174 | 5.75e-11 | 65.1 |
| Msa0729600 | AT5G53950.1 | 28.372 | 215 | 126 | 9 | 58 | 262 | 17 | 213 | 6.90e-11 | 64.3 |
Find 115 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAGTATGCTGACAATT+TGG | 0.134743 | 5_1:+37255415 | None:intergenic |
| CTTCTTCCACAGAGCAATTA+AGG | 0.224693 | 5_1:-37253232 | Msa0729600:CDS |
| GGATCAAATTTGACACCTTT+TGG | 0.259342 | 5_1:+37253503 | None:intergenic |
| TGCTTCTTTGTTTGACAACT+TGG | 0.279960 | 5_1:-37249631 | Msa0729600:three_prime_UTR |
| TGAACCCCATTCAAGATTAC+TGG | 0.283602 | 5_1:+37253123 | None:intergenic |
| GAAAAGCTGAGAAAACTAAT+TGG | 0.286732 | 5_1:-37253050 | Msa0729600:CDS |
| CAAGATAGCTTTATAGCATT+TGG | 0.294737 | 5_1:-37249774 | Msa0729600:CDS |
| TTTGTGTTTATATAGGAATT+TGG | 0.295109 | 5_1:-37249801 | Msa0729600:intron |
| CATCTGATCAGGAGGTAATT+TGG | 0.312766 | 5_1:-37253481 | Msa0729600:CDS |
| GGCTCAGGAGTCACAGATTT+GGG | 0.319343 | 5_1:+37252862 | None:intergenic |
| CAATAGTATGCTGACAATTT+GGG | 0.324090 | 5_1:+37255416 | None:intergenic |
| CCAACAGCAGCAAGTCAAAC+TGG | 0.324794 | 5_1:-37252953 | Msa0729600:CDS |
| AGGCTCAGGAGTCACAGATT+TGG | 0.328067 | 5_1:+37252861 | None:intergenic |
| GAAGCAACAGTTAGGTTTGC+GGG | 0.348863 | 5_1:+37249648 | None:intergenic |
| GACGTCCGCTGGCACAAAAC+TGG | 0.357268 | 5_1:-37253156 | Msa0729600:CDS |
| AACAAGGTAGTAAAGTAATA+TGG | 0.369882 | 5_1:-37249747 | Msa0729600:exon |
| TCTGTTGGATTCACAACAAC+TGG | 0.369929 | 5_1:-37250115 | Msa0729600:CDS |
| AAAATACATGATCAGGATTT+GGG | 0.372286 | 5_1:-37253180 | Msa0729600:CDS |
| ATCTTGAATGGGGTTCAAAA+AGG | 0.388213 | 5_1:-37253117 | Msa0729600:CDS |
| TTATAGTGAAAGACAGTATT+CGG | 0.389524 | 5_1:-37252836 | Msa0729600:CDS |
| ATTGTTGCTTCAATAGCTTC+AGG | 0.390657 | 5_1:+37252907 | None:intergenic |
| ACATTTGACTCTGCATTTGA+AGG | 0.393867 | 5_1:+37249928 | None:intergenic |
| GCAATTAAGGCTTATAATAC+TGG | 0.394443 | 5_1:-37253219 | Msa0729600:CDS |
| ATCATCAAGTCTCTCCTCTA+TGG | 0.401552 | 5_1:-37256227 | Msa0729600:exon |
| AGAAAGACACAGCGAGAAAG+AGG | 0.401966 | 5_1:-37256292 | Msa0729600:five_prime_UTR |
| CAAACAAAGAAGCAACAGTT+AGG | 0.403441 | 5_1:+37249640 | None:intergenic |
| GAATACTGTCTTTCACTATA+AGG | 0.423713 | 5_1:+37252838 | None:intergenic |
| ATATCCTTCTTCAGATGCTC+TGG | 0.424976 | 5_1:+37249979 | None:intergenic |
| GTCACAGATTTGGGAGTAAC+CGG | 0.426136 | 5_1:+37252871 | None:intergenic |
| TCATCTTTACCATCTCTAGT+AGG | 0.429288 | 5_1:+37250048 | None:intergenic |
| CTAAGCCAGTAATCTTGAAT+GGG | 0.433717 | 5_1:-37253128 | Msa0729600:CDS |
| CAAATTTGATCCATCTGATC+AGG | 0.442832 | 5_1:-37253492 | Msa0729600:CDS |
| CAGTATTCGGATGTAGATCT+AGG | 0.447710 | 5_1:-37252823 | Msa0729600:CDS |
| AGGAACAGAAGAGGATGAAA+AGG | 0.451744 | 5_1:-37253007 | Msa0729600:CDS |
| ACTAAGCCAGTAATCTTGAA+TGG | 0.454048 | 5_1:-37253129 | Msa0729600:CDS |
| ACCAAAATTAAAAGTGCATC+GGG | 0.455483 | 5_1:-37255490 | Msa0729600:CDS |
| GCAAGTCAAACTGGGTGATA+AGG | 0.457369 | 5_1:-37252944 | Msa0729600:CDS |
| AGGTTTACCTGGGGAATGGC+GGG | 0.461494 | 5_1:+37252790 | None:intergenic |
| AGGATTTGGGTGACGTCCGC+TGG | 0.463363 | 5_1:-37253167 | Msa0729600:CDS |
| AAAAGCTGAGAAAACTAATT+GGG | 0.463490 | 5_1:-37253049 | Msa0729600:CDS |
| GCCTCCTCAGATGAATTGTC+TGG | 0.464452 | 5_1:-37250325 | Msa0729600:CDS |
| GGAGTTTCGACTAAGTCAAT+TGG | 0.465851 | 5_1:-37249887 | Msa0729600:intron |
| ATTACTCTTGAAGTGAATGA+TGG | 0.470794 | 5_1:-37253395 | Msa0729600:CDS |
| TTCTTGTAACTATAAGTTGT+GGG | 0.476043 | 5_1:-37249698 | Msa0729600:three_prime_UTR |
| GAGTGGCCTGGTTTGCCAAA+AGG | 0.477697 | 5_1:-37253518 | Msa0729600:CDS |
| TTTAAGGTTTACCTGGGGAA+TGG | 0.481491 | 5_1:+37252786 | None:intergenic |
| GCTTCTTTGTTTGACAACTT+GGG | 0.482925 | 5_1:-37249630 | Msa0729600:three_prime_UTR |
| TCAAGTCTCTCCTCTATGGC+GGG | 0.485338 | 5_1:-37256223 | Msa0729600:exon |
| CATAAATAGAAAGGCTGGGT+TGG | 0.487379 | 5_1:+37250013 | None:intergenic |
| ATTGAAAATAATCCTGATGA+TGG | 0.487705 | 5_1:-37250168 | Msa0729600:CDS |
| CTTTCTATTTATGCTCAGCT+AGG | 0.488398 | 5_1:-37250003 | Msa0729600:CDS |
| AACAATCACAAAAGTGGATC+CGG | 0.490246 | 5_1:-37252890 | Msa0729600:CDS |
| CTGAGCATAAATAGAAAGGC+TGG | 0.491378 | 5_1:+37250008 | None:intergenic |
| TTTCTTGTAACTATAAGTTG+TGG | 0.492549 | 5_1:-37249699 | Msa0729600:three_prime_UTR |
| CCTAAAACAACCTGAAAAGT+AGG | 0.498302 | 5_1:-37256259 | Msa0729600:five_prime_UTR |
| ACTCATCCTCAAAACTTGCC+AGG | 0.498733 | 5_1:-37253362 | Msa0729600:intron |
| TGAAGCAACAATCACAAAAG+TGG | 0.500776 | 5_1:-37252896 | Msa0729600:CDS |
| CTGACAATTTGGGCAAGCCT+TGG | 0.506059 | 5_1:+37255426 | None:intergenic |
| TTTCTATATGCAGACCATCA+TGG | 0.507135 | 5_1:-37255537 | Msa0729600:intron |
| GTTATGCATCAATATCATCT+AGG | 0.507798 | 5_1:-37253027 | Msa0729600:CDS |
| CTTTCACTATAAGGAGGCTC+AGG | 0.512409 | 5_1:+37252847 | None:intergenic |
| TGCATCGGGAGCATGTGATC+CGG | 0.516041 | 5_1:-37255476 | Msa0729600:CDS |
| CCAGTTTGACTTGCTGCTGT+TGG | 0.516424 | 5_1:+37252953 | None:intergenic |
| AAGGTTTACCTGGGGAATGG+CGG | 0.521012 | 5_1:+37252789 | None:intergenic |
| ATGTCAGGTGTTAAGCAAGA+TGG | 0.522325 | 5_1:-37253267 | Msa0729600:intron |
| AATGAAAATAATGCTGATGA+TGG | 0.526709 | 5_1:-37250219 | Msa0729600:CDS |
| AACCAAAATTAAAAGTGCAT+CGG | 0.530697 | 5_1:-37255491 | Msa0729600:CDS |
| GTTCTGTATATGAGTAGTGC+AGG | 0.531845 | 5_1:-37253078 | Msa0729600:CDS |
| TTGCTTGCAAAATGTGGTGT+TGG | 0.532555 | 5_1:-37253455 | Msa0729600:CDS |
| TTTGCTTGCTCTTCACAATG+AGG | 0.533963 | 5_1:+37250291 | None:intergenic |
| CAATTTGGGCAAGCCTTGGT+AGG | 0.534551 | 5_1:+37255430 | None:intergenic |
| GTAGAAACTGAACATAATGA+AGG | 0.537204 | 5_1:-37250252 | Msa0729600:CDS |
| AGAAGCAACAGTTAGGTTTG+CGG | 0.539177 | 5_1:+37249647 | None:intergenic |
| ACTCTGCATTTGAAGGCTCA+AGG | 0.539581 | 5_1:+37249935 | None:intergenic |
| CTAGCTGAGCATAAATAGAA+AGG | 0.539748 | 5_1:+37250004 | None:intergenic |
| TAGTGAATCACAAAATCTGT+TGG | 0.540122 | 5_1:-37250130 | Msa0729600:CDS |
| TACCATCTCTAGTAGGAGAC+TGG | 0.544929 | 5_1:+37250055 | None:intergenic |
| TAATTGCTCTGTGGAAGAAG+TGG | 0.556020 | 5_1:+37253235 | None:intergenic |
| GTTGTAAGGTTGTAAAAGAG+TGG | 0.556602 | 5_1:-37253535 | Msa0729600:intron |
| CAAATTACCTCCTGATCAGA+TGG | 0.556689 | 5_1:+37253482 | None:intergenic |
| AGGACCAGAGCATCTGAAGA+AGG | 0.560183 | 5_1:-37249983 | Msa0729600:CDS |
| GAAAGACACAGCGAGAAAGA+GGG | 0.561279 | 5_1:-37256291 | Msa0729600:five_prime_UTR |
| AACTCGTCAACGAAAGGATG+AGG | 0.562435 | 5_1:+37253422 | None:intergenic |
| ATCAAGTCTCTCCTCTATGG+CGG | 0.563599 | 5_1:-37256224 | Msa0729600:exon |
| AGACACACCCGCCATTCCCC+AGG | 0.573342 | 5_1:-37252797 | Msa0729600:intron |
| TGTAGAGAATGACACACCTT+CGG | 0.575337 | 5_1:-37249908 | Msa0729600:CDS |
| AGCCAGTCTCCTACTAGAGA+TGG | 0.577237 | 5_1:-37250057 | Msa0729600:CDS |
| ATTATGTTCAGTTTCTACCA+TGG | 0.577859 | 5_1:+37250257 | None:intergenic |
| ATAATAAACTCGTCAACGAA+AGG | 0.582156 | 5_1:+37253416 | None:intergenic |
| TCCAGACAATTCATCTGAGG+AGG | 0.583627 | 5_1:+37250324 | None:intergenic |
| CAAGTCTCTCCTCTATGGCG+GGG | 0.593225 | 5_1:-37256222 | Msa0729600:intron |
| TGTTACATACCCCGCCATAG+AGG | 0.594691 | 5_1:+37256213 | None:intergenic |
| AAGGTTGTAAAAGAGTGGCC+TGG | 0.594766 | 5_1:-37253530 | Msa0729600:CDS |
| AGCAAAAGATGATCTATCCA+TGG | 0.596236 | 5_1:-37250274 | Msa0729600:CDS |
| GTGATCCGGAAAATGTTACA+TGG | 0.597855 | 5_1:-37255462 | Msa0729600:CDS |
| ATGCAGACCATCATGGCTAG+TGG | 0.599353 | 5_1:-37255530 | Msa0729600:intron |
| CAACAGCAGCAAGTCAAACT+GGG | 0.602243 | 5_1:-37252952 | Msa0729600:CDS |
| TATATGAGTAGTGCAGGAGG+AGG | 0.609676 | 5_1:-37253072 | Msa0729600:CDS |
| AGAAATCTGCATCTCAGATG+AGG | 0.615799 | 5_1:+37249717 | None:intergenic |
| TGGCACTTGCTTGCAAAATG+TGG | 0.618127 | 5_1:-37253461 | Msa0729600:CDS |
| TAGAAACTGAACATAATGAA+GGG | 0.620128 | 5_1:-37250251 | Msa0729600:CDS |
| TCATCCAGACAATTCATCTG+AGG | 0.620597 | 5_1:+37250321 | None:intergenic |
| TGAGCATAAATAGAAAGGCT+GGG | 0.624006 | 5_1:+37250009 | None:intergenic |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.629598 | 5_1:-37253003 | Msa0729600:CDS |
| ATTTGATCCATCTGATCAGG+AGG | 0.636045 | 5_1:-37253489 | Msa0729600:CDS |
| AATTGCTCTGTGGAAGAAGT+GGG | 0.639626 | 5_1:+37253236 | None:intergenic |
| TACTGTCTTTCACTATAAGG+AGG | 0.644386 | 5_1:+37252841 | None:intergenic |
| ATATCATCTAGGAACAGAAG+AGG | 0.646141 | 5_1:-37253016 | Msa0729600:CDS |
| ATGGAAAAGCAATCCTACCA+AGG | 0.655385 | 5_1:-37255443 | Msa0729600:CDS |
| CTGTATATGAGTAGTGCAGG+AGG | 0.660155 | 5_1:-37253075 | Msa0729600:CDS |
| AGGCTTATAATACTGGCACT+CGG | 0.668317 | 5_1:-37253212 | Msa0729600:CDS |
| TATAAGCCTTAATTGCTCTG+TGG | 0.669172 | 5_1:+37253226 | None:intergenic |
| TAAGCCAGTAATCTTGAATG+GGG | 0.669245 | 5_1:-37253127 | Msa0729600:CDS |
| TGACTTAGTCGAAACTCCGA+AGG | 0.670660 | 5_1:+37249892 | None:intergenic |
| TATAGCATTTGGTTACAACA+AGG | 0.688806 | 5_1:-37249763 | Msa0729600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTATTATTATTTTTT+TGG | - | chr5_1:37249837-37249856 | Msa0729600:intron | 0.0% |
| !!! | TTTTATTTTATAATTTTTAT+TGG | + | chr5_1:37254603-37254622 | None:intergenic | 0.0% |
| !! | TTATAAAATAAAATAAAAAA+AGG | - | chr5_1:37254610-37254629 | Msa0729600:intron | 0.0% |
| !! | TATAAAATAAAATAAAAAAA+GGG | - | chr5_1:37254611-37254630 | Msa0729600:intron | 0.0% |
| !! | ATTAATTATTTGACAAAAAA+AGG | + | chr5_1:37253204-37253223 | None:intergenic | 10.0% |
| !!! | ATTTTTACTCATATTTAATA+CGG | + | chr5_1:37253519-37253538 | None:intergenic | 10.0% |
| !! | GTGTATAAATTAATAAAAAT+CGG | - | chr5_1:37253547-37253566 | Msa0729600:intron | 10.0% |
| !!! | AATTACAAAAAAATATGTTT+TGG | - | chr5_1:37253612-37253631 | Msa0729600:intron | 10.0% |
| !! | AATAGTATATATATAAAGTA+AGG | - | chr5_1:37253643-37253662 | Msa0729600:intron | 10.0% |
| !!! | CAATTTATTTATTTGTTTTT+AGG | - | chr5_1:37253912-37253931 | Msa0729600:intron | 10.0% |
| !! | TAAAATAAAATAAAAAAAGG+GGG | - | chr5_1:37254613-37254632 | Msa0729600:intron | 10.0% |
| !! | TTAAAAACAAAAATCATTGT+TGG | - | chr5_1:37249480-37249499 | Msa0729600:three_prime_UTR | 15.0% |
| !!! | TTTTTCTTGATGATTTTTTA+GGG | - | chr5_1:37250455-37250474 | Msa0729600:intron | 15.0% |
| !! | AATTGTTCAATATTTGTAAA+GGG | + | chr5_1:37250955-37250974 | None:intergenic | 15.0% |
| !! | AAATTGTTCAATATTTGTAA+AGG | + | chr5_1:37250956-37250975 | None:intergenic | 15.0% |
| !! | TAAAACATTTCATAAGATTT+AGG | + | chr5_1:37251361-37251380 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTGATATTATGT+TGG | + | chr5_1:37251446-37251465 | None:intergenic | 15.0% |
| !!! | GGTTTTAAAAAAAAAAACAA+GGG | + | chr5_1:37251721-37251740 | None:intergenic | 15.0% |
| !!! | TGGTTTTAAAAAAAAAAACA+AGG | + | chr5_1:37251722-37251741 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTTTAAAACCA+AGG | - | chr5_1:37251722-37251741 | Msa0729600:intron | 15.0% |
| !! | ATTGTTTATAACTATCAATA+TGG | + | chr5_1:37252227-37252246 | None:intergenic | 15.0% |
| !!! | GATTATTTTCTTTGTAATTT+TGG | + | chr5_1:37253276-37253295 | None:intergenic | 15.0% |
| !!! | TATAAAGTAAGGTTTTTTTA+TGG | - | chr5_1:37253654-37253673 | Msa0729600:intron | 15.0% |
| !! | AAATTAATGAAAATATTGAG+TGG | + | chr5_1:37253784-37253803 | None:intergenic | 15.0% |
| !! | TTAGATGAAAAAAATGTTTA+GGG | + | chr5_1:37254163-37254182 | None:intergenic | 15.0% |
| !!! | TATAATTTTTATTGGTTCAT+TGG | + | chr5_1:37254595-37254614 | None:intergenic | 15.0% |
| !!! | ACATTTTTGTTTATTAATCA+AGG | - | chr5_1:37255300-37255319 | Msa0729600:intron | 15.0% |
| !!! | ATTTGATAATGAAACATAGT+AGG | + | chr5_1:37249624-37249643 | None:intergenic | 20.0% |
| !!! | TTGTTTTAACTTCATGAATT+TGG | - | chr5_1:37249930-37249949 | Msa0729600:CDS | 20.0% |
| !! | ACATTTGGATAAAAACTAAA+TGG | - | chr5_1:37249953-37249972 | Msa0729600:CDS | 20.0% |
| !! | CATTTGGATAAAAACTAAAT+GGG | - | chr5_1:37249954-37249973 | Msa0729600:CDS | 20.0% |
| !!! | ATGTGTTTTCTATGTTTAAA+TGG | - | chr5_1:37250006-37250025 | Msa0729600:CDS | 20.0% |
| !!! | CTTTTTCTTGATGATTTTTT+AGG | - | chr5_1:37250454-37250473 | Msa0729600:intron | 20.0% |
| !! | AAAGCATATATCCTATAAAT+AGG | - | chr5_1:37250585-37250604 | Msa0729600:intron | 20.0% |
| !! | ATATATCCTATAAATAGGAA+TGG | - | chr5_1:37250590-37250609 | Msa0729600:intron | 20.0% |
| !! | TATATCCTATAAATAGGAAT+GGG | - | chr5_1:37250591-37250610 | Msa0729600:intron | 20.0% |
| !!! | TTTCGTAATGTTTTGAATTT+TGG | + | chr5_1:37251411-37251430 | None:intergenic | 20.0% |
| !!! | AATTATCAGTTCTTTTCTTT+AGG | + | chr5_1:37251498-37251517 | None:intergenic | 20.0% |
| !! | AACTATCAATATGGTATATA+TGG | + | chr5_1:37252218-37252237 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTTCTGTTGTA+AGG | - | chr5_1:37252255-37252274 | Msa0729600:intron | 20.0% |
| !!! | AACAAGAAAAAATGGTTTTA+AGG | + | chr5_1:37253037-37253056 | None:intergenic | 20.0% |
| !!! | TCTTTGATAACAAGAAAAAA+TGG | + | chr5_1:37253045-37253064 | None:intergenic | 20.0% |
| !!! | TTTAGTTCATTTTCAACAAA+TGG | + | chr5_1:37253305-37253324 | None:intergenic | 20.0% |
| !!! | TCAATTAGTTTTTATGTTTG+AGG | - | chr5_1:37253982-37254001 | Msa0729600:intron | 20.0% |
| !! | TTTATGTTTGAGGAAAAAAA+TGG | - | chr5_1:37253992-37254011 | Msa0729600:intron | 20.0% |
| !! | GTTAGATGAAAAAAATGTTT+AGG | + | chr5_1:37254164-37254183 | None:intergenic | 20.0% |
| !!! | TCTAACATTTTTTCTTTTTC+AGG | - | chr5_1:37254178-37254197 | Msa0729600:intron | 20.0% |
| !! | GAGAAAAAAATCAATTGAAA+GGG | + | chr5_1:37254226-37254245 | None:intergenic | 20.0% |
| !! | AGAGAAAAAAATCAATTGAA+AGG | + | chr5_1:37254227-37254246 | None:intergenic | 20.0% |
| !! | TTACTATTTAATATCTAACC+CGG | - | chr5_1:37254473-37254492 | Msa0729600:intron | 20.0% |
| !! | ATTAAAATCTAAATACTCAG+TGG | + | chr5_1:37254796-37254815 | None:intergenic | 20.0% |
| !!! | TCATTTAAGATAGGTTTTTA+TGG | - | chr5_1:37254832-37254851 | Msa0729600:intron | 20.0% |
| !! | TTTGTGTTTATATAGGAATT+TGG | - | chr5_1:37256003-37256022 | Msa0729600:intron | 20.0% |
| !! | TTCTGATTTGATTTATGAGA+TGG | - | chr5_1:37249680-37249699 | Msa0729600:three_prime_UTR | 25.0% |
| !! | TCTGATTTGATTTATGAGAT+GGG | - | chr5_1:37249681-37249700 | Msa0729600:three_prime_UTR | 25.0% |
| !! | AAATGCCTAAATCTGAAATA+TGG | - | chr5_1:37250078-37250097 | Msa0729600:CDS | 25.0% |
| !! | AACCAAAATTAAAAGTGCAT+CGG | - | chr5_1:37250313-37250332 | Msa0729600:CDS | 25.0% |
| !!! | TTTTTTAGGGTACATTGTTA+TGG | - | chr5_1:37250468-37250487 | Msa0729600:intron | 25.0% |
| ! | ATCTATCAAGTACTAAACTA+TGG | + | chr5_1:37250513-37250532 | None:intergenic | 25.0% |
| ! | AATCCATTGTAAGTTAGTTA+AGG | - | chr5_1:37250533-37250552 | Msa0729600:intron | 25.0% |
| ! | ATCCATTGTAAGTTAGTTAA+GGG | - | chr5_1:37250534-37250553 | Msa0729600:intron | 25.0% |
| ! | TAAATCCCATTCCTATTTAT+AGG | + | chr5_1:37250599-37250618 | None:intergenic | 25.0% |
| ! | AATTCTGTTGGAAAAAGATA+GGG | - | chr5_1:37250743-37250762 | Msa0729600:intron | 25.0% |
| ! | GAAAAACAAAATTGCAAAAG+AGG | + | chr5_1:37250842-37250861 | None:intergenic | 25.0% |
| ! | ATAATACTGCGGTATATTAA+TGG | + | chr5_1:37250870-37250889 | None:intergenic | 25.0% |
| ! | AATTAGATGGAATAATACTG+CGG | + | chr5_1:37250881-37250900 | None:intergenic | 25.0% |
| ! | TCCTAAAAGTTATGAAATAG+CGG | + | chr5_1:37251226-37251245 | None:intergenic | 25.0% |
| ! | AACATTTCATAAGATTTAGG+TGG | + | chr5_1:37251358-37251377 | None:intergenic | 25.0% |
| ! | TATCTAATATAAAGCAACGA+CGG | - | chr5_1:37251552-37251571 | Msa0729600:intron | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr5_1:37251757-37251776 | Msa0729600:intron | 25.0% |
| !!! | TTTTTTCCTAAGACATTTGT+AGG | + | chr5_1:37252115-37252134 | None:intergenic | 25.0% |
| !! | AATCCTGATCATGTATTTTT+CGG | + | chr5_1:37252623-37252642 | None:intergenic | 25.0% |
| ! | AAAAATACATGATCAGGATT+TGG | - | chr5_1:37252623-37252642 | Msa0729600:intron | 25.0% |
| ! | AAAATACATGATCAGGATTT+GGG | - | chr5_1:37252624-37252643 | Msa0729600:intron | 25.0% |
| ! | AAAAGGCTGTAAAAAGATTA+TGG | - | chr5_1:37252704-37252723 | Msa0729600:intron | 25.0% |
| ! | AAAAGCTGAGAAAACTAATT+GGG | - | chr5_1:37252755-37252774 | Msa0729600:intron | 25.0% |
| ! | TTATAGTGAAAGACAGTATT+CGG | - | chr5_1:37252968-37252987 | Msa0729600:CDS | 25.0% |
| ! | ATTTGGACTCAAAATATTAG+TGG | - | chr5_1:37253173-37253192 | Msa0729600:CDS | 25.0% |
| ! | TTTGGACTCAAAATATTAGT+GGG | - | chr5_1:37253174-37253193 | Msa0729600:CDS | 25.0% |
| ! | AAGAACATCTCTTTCTATAT+AGG | - | chr5_1:37253348-37253367 | Msa0729600:intron | 25.0% |
| ! | AGAAATATTGAGAATGAATG+TGG | + | chr5_1:37253692-37253711 | None:intergenic | 25.0% |
| ! | AAGGGAATAAAATTGATGTT+TGG | + | chr5_1:37254208-37254227 | None:intergenic | 25.0% |
| ! | TACTATTTAATATCTAACCC+GGG | - | chr5_1:37254474-37254493 | Msa0729600:intron | 25.0% |
| ! | CTATCTTAAATGATGTCTAA+AGG | + | chr5_1:37254825-37254844 | None:intergenic | 25.0% |
| !! | CTTTAGACATCATTTAAGAT+AGG | - | chr5_1:37254823-37254842 | Msa0729600:intron | 25.0% |
| !!! | TATTAAAGCCATATTTCTAG+AGG | + | chr5_1:37255163-37255182 | None:intergenic | 25.0% |
| ! | AGCATTATTAAAGCCATTAA+GGG | + | chr5_1:37255259-37255278 | None:intergenic | 25.0% |
| ! | TAGCATTATTAAAGCCATTA+AGG | + | chr5_1:37255260-37255279 | None:intergenic | 25.0% |
| ! | ATAAACAAAAATGTGCAGAA+TGG | + | chr5_1:37255294-37255313 | None:intergenic | 25.0% |
| !!! | CTAATTTTGGATTTGCTATA+AGG | - | chr5_1:37255351-37255370 | Msa0729600:intron | 25.0% |
| ! | ATAGAACACAAAAATAGATC+AGG | + | chr5_1:37255446-37255465 | None:intergenic | 25.0% |
| ! | TAGAAACTGAACATAATGAA+GGG | - | chr5_1:37255553-37255572 | Msa0729600:intron | 25.0% |
| ! | AATGAAAATAATGCTGATGA+TGG | - | chr5_1:37255585-37255604 | Msa0729600:intron | 25.0% |
| ! | ATTGAAAATAATCCTGATGA+TGG | - | chr5_1:37255636-37255655 | Msa0729600:intron | 25.0% |
| ! | TAAAAACTCATTGAGAACAT+GGG | + | chr5_1:37255947-37255966 | None:intergenic | 25.0% |
| ! | ATAAAAACTCATTGAGAACA+TGG | + | chr5_1:37255948-37255967 | None:intergenic | 25.0% |
| !! | ACGCATTTTTGTGTTTATAT+AGG | - | chr5_1:37255996-37256015 | Msa0729600:intron | 25.0% |
| ! | AACAAGGTAGTAAAGTAATA+TGG | - | chr5_1:37256057-37256076 | Msa0729600:intron | 25.0% |
| ! | TTTCTTGTAACTATAAGTTG+TGG | - | chr5_1:37256105-37256124 | Msa0729600:intron | 25.0% |
| ! | TTCTTGTAACTATAAGTTGT+GGG | - | chr5_1:37256106-37256125 | Msa0729600:intron | 25.0% |
| !! | CAAGCATATTATCTTCTTTT+TGG | - | chr5_1:37256256-37256275 | Msa0729600:five_prime_UTR | 25.0% |
| !!! | CACTTCAAGCATTTTTTTTT+TGG | - | chr5_1:37256315-37256334 | Msa0729600:five_prime_UTR | 25.0% |
| ! | ATTTGATTTATGAGATGGGT+TGG | - | chr5_1:37249685-37249704 | Msa0729600:three_prime_UTR | 30.0% |
| !! | GTTTGTGTTTTTGTTCAAGT+TGG | - | chr5_1:37249744-37249763 | Msa0729600:exon | 30.0% |
| !!! | TTGGTCAGTTTAGGTTTTTT+TGG | - | chr5_1:37249763-37249782 | Msa0729600:CDS | 30.0% |
| ! | TCCTTGGTTTAAAATTGACA+TGG | - | chr5_1:37249900-37249919 | Msa0729600:CDS | 30.0% |
| ! | ACCATGTCAATTTTAAACCA+AGG | + | chr5_1:37249904-37249923 | None:intergenic | 30.0% |
| ! | TGGTTTAAAATTGACATGGT+TGG | - | chr5_1:37249904-37249923 | Msa0729600:CDS | 30.0% |
| ACTTCATGAATTTGGACATT+TGG | - | chr5_1:37249938-37249957 | Msa0729600:CDS | 30.0% | |
| CAAGTCCATATTTCAGATTT+AGG | + | chr5_1:37250086-37250105 | None:intergenic | 30.0% | |
| ! | GATAATGCTCTTAGATTTTG+TGG | - | chr5_1:37250105-37250124 | Msa0729600:CDS | 30.0% |
| TATTAAGTAAGAGATTCCTC+TGG | + | chr5_1:37250174-37250193 | None:intergenic | 30.0% | |
| !! | TTAGATTATGTGTGTTGACT+AGG | - | chr5_1:37250207-37250226 | Msa0729600:CDS | 30.0% |
| ! | ACCAAAATTAAAAGTGCATC+GGG | - | chr5_1:37250314-37250333 | Msa0729600:CDS | 30.0% |
| ! | CTTTTCCATGTAACATTTTC+CGG | + | chr5_1:37250350-37250369 | None:intergenic | 30.0% |
| CAATAGTATGCTGACAATTT+GGG | + | chr5_1:37250391-37250410 | None:intergenic | 30.0% | |
| TCAATAGTATGCTGACAATT+TGG | + | chr5_1:37250392-37250411 | None:intergenic | 30.0% | |
| TCCATTGTAAGTTAGTTAAG+GGG | - | chr5_1:37250535-37250554 | Msa0729600:intron | 30.0% | |
| AGTTAGTTAAGGGGTTATAT+AGG | - | chr5_1:37250544-37250563 | Msa0729600:intron | 30.0% | |
| ATCTAATCCATCAATTCTGT+TGG | - | chr5_1:37250731-37250750 | Msa0729600:intron | 30.0% | |
| ! | TCTTTTTCCAACAGAATTGA+TGG | + | chr5_1:37250741-37250760 | None:intergenic | 30.0% |
| CAATTCTGTTGGAAAAAGAT+AGG | - | chr5_1:37250742-37250761 | Msa0729600:intron | 30.0% | |
| GGGTTCAAACAAAAATTAGA+TGG | + | chr5_1:37250894-37250913 | None:intergenic | 30.0% | |
| !! | GTTTTTAAGCGTGTATTAGA+TGG | - | chr5_1:37251058-37251077 | Msa0729600:intron | 30.0% |
| TCAAACTATCTGGATTCAAA+TGG | - | chr5_1:37251091-37251110 | Msa0729600:intron | 30.0% | |
| AAATGGTCTATCATTAGACT+TGG | - | chr5_1:37251108-37251127 | Msa0729600:intron | 30.0% | |
| !! | ACCGCTATTTCATAACTTTT+AGG | - | chr5_1:37251222-37251241 | Msa0729600:intron | 30.0% |
| !! | CGTAATGTTTTGAATTTTGG+TGG | + | chr5_1:37251408-37251427 | None:intergenic | 30.0% |
| ATTCCAACATAACATAGCAT+TGG | - | chr5_1:37251515-37251534 | Msa0729600:intron | 30.0% | |
| TTTCCAATGCTATGTTATGT+TGG | + | chr5_1:37251521-37251540 | None:intergenic | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr5_1:37251654-37251673 | None:intergenic | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | - | chr5_1:37251672-37251691 | Msa0729600:intron | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | - | chr5_1:37251673-37251692 | Msa0729600:intron | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr5_1:37251742-37251761 | None:intergenic | 30.0% | |
| TTATGAGATCGTTTGAGAAA+AGG | - | chr5_1:37251940-37251959 | Msa0729600:intron | 30.0% | |
| AATCTGTTGTTACATCAGTT+GGG | - | chr5_1:37252000-37252019 | Msa0729600:intron | 30.0% | |
| TTAGTTCCTACAAATGTCTT+AGG | - | chr5_1:37252106-37252125 | Msa0729600:intron | 30.0% | |
| ATAATAAACTCGTCAACGAA+AGG | + | chr5_1:37252391-37252410 | None:intergenic | 30.0% | |
| ATTACTCTTGAAGTGAATGA+TGG | - | chr5_1:37252409-37252428 | Msa0729600:intron | 30.0% | |
| TAAGCTTCAATGAAAATGTC+AGG | - | chr5_1:37252522-37252541 | Msa0729600:intron | 30.0% | |
| GCAATTAAGGCTTATAATAC+TGG | - | chr5_1:37252585-37252604 | Msa0729600:intron | 30.0% | |
| GAAAAGCTGAGAAAACTAAT+TGG | - | chr5_1:37252754-37252773 | Msa0729600:intron | 30.0% | |
| GTTATGCATCAATATCATCT+AGG | - | chr5_1:37252777-37252796 | Msa0729600:intron | 30.0% | |
| GAATACTGTCTTTCACTATA+AGG | + | chr5_1:37252969-37252988 | None:intergenic | 30.0% | |
| !!! | AATGGTTTTAAGGTTTACCT+GGG | + | chr5_1:37253027-37253046 | None:intergenic | 30.0% |
| !!! | AAATGGTTTTAAGGTTTACC+TGG | + | chr5_1:37253028-37253047 | None:intergenic | 30.0% |
| TTGGACTCAAAATATTAGTG+GGG | - | chr5_1:37253175-37253194 | Msa0729600:CDS | 30.0% | |
| CAATAATGAATTAGTCCAAG+TGG | + | chr5_1:37254311-37254330 | None:intergenic | 30.0% | |
| ! | TATATACTAGTTTAGAGACC+CGG | + | chr5_1:37254505-37254524 | None:intergenic | 30.0% |
| AATCTAAATACTCAGTGGTT+TGG | + | chr5_1:37254791-37254810 | None:intergenic | 30.0% | |
| ! | AAAAACCTTTTCTCACTAGT+GGG | + | chr5_1:37254869-37254888 | None:intergenic | 30.0% |
| ! | AAAAAACCTTTTCTCACTAG+TGG | + | chr5_1:37254870-37254889 | None:intergenic | 30.0% |
| TGCATAATATATGCAATGTC+CGG | - | chr5_1:37254948-37254967 | Msa0729600:intron | 30.0% | |
| !!! | TAGGAGGGAAAACTTTTTTT+TGG | + | chr5_1:37254994-37255013 | None:intergenic | 30.0% |
| ! | TTTCACATCCTCTAGAAATA+TGG | - | chr5_1:37255152-37255171 | Msa0729600:intron | 30.0% |
| AACACACAAAACAACTTGTA+AGG | + | chr5_1:37255213-37255232 | None:intergenic | 30.0% | |
| !! | TTGTTTTGTGTGTTTGAGTT+AGG | - | chr5_1:37255219-37255238 | Msa0729600:intron | 30.0% |
| ATTATGTTCAGTTTCTACCA+TGG | + | chr5_1:37255550-37255569 | None:intergenic | 30.0% | |
| GTAGAAACTGAACATAATGA+AGG | - | chr5_1:37255552-37255571 | Msa0729600:intron | 30.0% | |
| TAGTGAATCACAAAATCTGT+TGG | - | chr5_1:37255674-37255693 | Msa0729600:intron | 30.0% | |
| !! | CAAGATAGCTTTATAGCATT+TGG | - | chr5_1:37256030-37256049 | Msa0729600:intron | 30.0% |
| TATAGCATTTGGTTACAACA+AGG | - | chr5_1:37256041-37256060 | Msa0729600:intron | 30.0% | |
| !!! | CCTACTTTTCAGGTTGTTTT+AGG | + | chr5_1:37249548-37249567 | None:intergenic | 35.0% |
| CCTAAAACAACCTGAAAAGT+AGG | - | chr5_1:37249545-37249564 | Msa0729600:three_prime_UTR | 35.0% | |
| !! | TAGCACAAAACCTACTTTTC+AGG | + | chr5_1:37249558-37249577 | None:intergenic | 35.0% |
| !! | TTGTTCAAGTTGGTCAGTTT+AGG | - | chr5_1:37249754-37249773 | Msa0729600:CDS | 35.0% |
| ACTAAGTGTAACTAGTTCCT+TGG | - | chr5_1:37249884-37249903 | Msa0729600:intron | 35.0% | |
| AAATAACATCGTGCGTAAAC+CGG | + | chr5_1:37250037-37250056 | None:intergenic | 35.0% | |
| TTTCTATATGCAGACCATCA+TGG | - | chr5_1:37250267-37250286 | Msa0729600:CDS | 35.0% | |
| !!! | TCCCGATGCACTTTTAATTT+TGG | + | chr5_1:37250318-37250337 | None:intergenic | 35.0% |
| TAGGGTACATTGTTATGGAA+TGG | - | chr5_1:37250473-37250492 | Msa0729600:intron | 35.0% | |
| AGGGTACATTGTTATGGAAT+GGG | - | chr5_1:37250474-37250493 | Msa0729600:intron | 35.0% | |
| ACCCCTTAACTAACTTACAA+TGG | + | chr5_1:37250539-37250558 | None:intergenic | 35.0% | |
| TAAGGGGTTATATAGGTAGT+TGG | - | chr5_1:37250551-37250570 | Msa0729600:intron | 35.0% | |
| TAGGAATGGGATTTATGTTG+AGG | - | chr5_1:37250604-37250623 | Msa0729600:intron | 35.0% | |
| AGGAATGGGATTTATGTTGA+GGG | - | chr5_1:37250605-37250624 | Msa0729600:intron | 35.0% | |
| GATTAGAATCGGAAAAGTCT+TGG | - | chr5_1:37250641-37250660 | Msa0729600:intron | 35.0% | |
| TCTTGGTCTCTTGATATCTA+GGG | - | chr5_1:37250658-37250677 | Msa0729600:intron | 35.0% | |
| !! | ATCGAGAAGTATTGTTTGTG+AGG | - | chr5_1:37250769-37250788 | Msa0729600:intron | 35.0% |
| !! | TCGAGAAGTATTGTTTGTGA+GGG | - | chr5_1:37250770-37250789 | Msa0729600:intron | 35.0% |
| AACCCATCAGTTTACTTAGT+AGG | - | chr5_1:37250909-37250928 | Msa0729600:intron | 35.0% | |
| ACCCATCAGTTTACTTAGTA+GGG | - | chr5_1:37250910-37250929 | Msa0729600:intron | 35.0% | |
| AATATTTGTAAAGGGCCACA+TGG | + | chr5_1:37250947-37250966 | None:intergenic | 35.0% | |
| TTTAAGCGTGTATTAGATGG+AGG | - | chr5_1:37251061-37251080 | Msa0729600:intron | 35.0% | |
| TAACTACTATGGTCCTATGA+TGG | + | chr5_1:37251135-37251154 | None:intergenic | 35.0% | |
| AGGACCATAGTAGTTAATAG+CGG | - | chr5_1:37251139-37251158 | Msa0729600:intron | 35.0% | |
| CTATCCGCTATTAACTACTA+TGG | + | chr5_1:37251146-37251165 | None:intergenic | 35.0% | |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr5_1:37251146-37251165 | Msa0729600:intron | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr5_1:37251187-37251206 | None:intergenic | 35.0% |
| AACGCATTTCTCGCAAAAAA+CGG | + | chr5_1:37251608-37251627 | None:intergenic | 35.0% | |
| ! | TTTTTGCGAGAAATGCGTTT+TGG | - | chr5_1:37251609-37251628 | Msa0729600:intron | 35.0% |
| ! | TTTTGCGAGAAATGCGTTTT+GGG | - | chr5_1:37251610-37251629 | Msa0729600:intron | 35.0% |
| CTATGCAGAGTAGTTAATAG+CGG | + | chr5_1:37251916-37251935 | None:intergenic | 35.0% | |
| CAATCTGTTGTTACATCAGT+TGG | - | chr5_1:37251999-37252018 | Msa0729600:intron | 35.0% | |
| !! | TTGACATTTAGCTTGTGAGT+TGG | + | chr5_1:37252035-37252054 | None:intergenic | 35.0% |
| GTTGTAAGGTTGTAAAAGAG+TGG | - | chr5_1:37252269-37252288 | Msa0729600:intron | 35.0% | |
| ! | GGATCAAATTTGACACCTTT+TGG | + | chr5_1:37252304-37252323 | None:intergenic | 35.0% |
| CAAATTTGATCCATCTGATC+AGG | - | chr5_1:37252312-37252331 | Msa0729600:intron | 35.0% | |
| TATAAGCCTTAATTGCTCTG+TGG | + | chr5_1:37252581-37252600 | None:intergenic | 35.0% | |
| ACTAAGCCAGTAATCTTGAA+TGG | - | chr5_1:37252675-37252694 | Msa0729600:intron | 35.0% | |
| CTAAGCCAGTAATCTTGAAT+GGG | - | chr5_1:37252676-37252695 | Msa0729600:intron | 35.0% | |
| TAAGCCAGTAATCTTGAATG+GGG | - | chr5_1:37252677-37252696 | Msa0729600:intron | 35.0% | |
| ATCTTGAATGGGGTTCAAAA+AGG | - | chr5_1:37252687-37252706 | Msa0729600:intron | 35.0% | |
| ATATCATCTAGGAACAGAAG+AGG | - | chr5_1:37252788-37252807 | Msa0729600:intron | 35.0% | |
| ! | ATTGTTGCTTCAATAGCTTC+AGG | + | chr5_1:37252900-37252919 | None:intergenic | 35.0% |
| TGAAGCAACAATCACAAAAG+TGG | - | chr5_1:37252908-37252927 | Msa0729600:CDS | 35.0% | |
| AACAATCACAAAAGTGGATC+CGG | - | chr5_1:37252914-37252933 | Msa0729600:CDS | 35.0% | |
| TACTGTCTTTCACTATAAGG+AGG | + | chr5_1:37252966-37252985 | None:intergenic | 35.0% | |
| !!! | ATGGTTTTAAGGTTTACCTG+GGG | + | chr5_1:37253026-37253045 | None:intergenic | 35.0% |
| AGTTCATGGCAAGTCATAAT+AGG | + | chr5_1:37253081-37253100 | None:intergenic | 35.0% | |
| ATAATGAGTACTCAGTAGCA+GGG | - | chr5_1:37253146-37253165 | Msa0729600:CDS | 35.0% | |
| AAATAAAAAAAGGGGGACCT+AGG | - | chr5_1:37254620-37254639 | Msa0729600:intron | 35.0% | |
| GCATAATATATGCAATGTCC+GGG | - | chr5_1:37254949-37254968 | Msa0729600:intron | 35.0% | |
| CATAATATATGCAATGTCCG+GGG | - | chr5_1:37254950-37254969 | Msa0729600:intron | 35.0% | |
| !!! | GGAAAACTTTTTTTTGGTGG+TGG | + | chr5_1:37254988-37255007 | None:intergenic | 35.0% |
| !!! | GAGGGAAAACTTTTTTTTGG+TGG | + | chr5_1:37254991-37255010 | None:intergenic | 35.0% |
| !! | CTATAGGTGGATTGAAACTA+AGG | + | chr5_1:37255045-37255064 | None:intergenic | 35.0% |
| CTTAGTTTCAATCCACCTAT+AGG | - | chr5_1:37255043-37255062 | Msa0729600:intron | 35.0% | |
| !! | TGGCTTTAATAGTGCAGATA+AGG | - | chr5_1:37255172-37255191 | Msa0729600:intron | 35.0% |
| ! | TTGTAAGGTACAGGCTTTTA+AGG | + | chr5_1:37255198-37255217 | None:intergenic | 35.0% |
| CAAAACAACTTGTAAGGTAC+AGG | + | chr5_1:37255207-37255226 | None:intergenic | 35.0% | |
| ! | AAATTAGAAGTGTAGCCAAG+TGG | + | chr5_1:37255338-37255357 | None:intergenic | 35.0% |
| ! | CTTGGCTACACTTCTAATTT+TGG | - | chr5_1:37255338-37255357 | Msa0729600:intron | 35.0% |
| AGCAAAAGATGATCTATCCA+TGG | - | chr5_1:37255530-37255549 | Msa0729600:intron | 35.0% | |
| ! | ATTCACTATCCCACCATTTT+TGG | + | chr5_1:37255662-37255681 | None:intergenic | 35.0% |
| TCATCTTTACCATCTCTAGT+AGG | + | chr5_1:37255759-37255778 | None:intergenic | 35.0% | |
| TGAGCATAAATAGAAAGGCT+GGG | + | chr5_1:37255798-37255817 | None:intergenic | 35.0% | |
| CTAGCTGAGCATAAATAGAA+AGG | + | chr5_1:37255803-37255822 | None:intergenic | 35.0% | |
| CTTTCTATTTATGCTCAGCT+AGG | - | chr5_1:37255801-37255820 | Msa0729600:intron | 35.0% | |
| ACATTTGACTCTGCATTTGA+AGG | + | chr5_1:37255879-37255898 | None:intergenic | 35.0% | |
| CAAACAAAGAAGCAACAGTT+AGG | + | chr5_1:37256167-37256186 | None:intergenic | 35.0% | |
| ! | TGCTTCTTTGTTTGACAACT+TGG | - | chr5_1:37256173-37256192 | Msa0729600:intron | 35.0% |
| ! | GCTTCTTTGTTTGACAACTT+GGG | - | chr5_1:37256174-37256193 | Msa0729600:intron | 35.0% |
| ! | ACAACTTGGGCTGTAATTTT+TGG | - | chr5_1:37256187-37256206 | Msa0729600:intron | 35.0% |
| ATCATCAAGTCTCTCCTCTA+TGG | - | chr5_1:37249577-37249596 | Msa0729600:three_prime_UTR | 40.0% | |
| GGGTGATAATCTTGCAAATG+TGG | - | chr5_1:37249974-37249993 | Msa0729600:CDS | 40.0% | |
| CTATGTTTAAATGGCGTTGC+CGG | - | chr5_1:37250015-37250034 | Msa0729600:CDS | 40.0% | |
| CATCTATGTAGTAAGACCAG+AGG | - | chr5_1:37250155-37250174 | Msa0729600:CDS | 40.0% | |
| GTGATCCGGAAAATGTTACA+TGG | - | chr5_1:37250342-37250361 | Msa0729600:intron | 40.0% | |
| ATGGAAAAGCAATCCTACCA+AGG | - | chr5_1:37250361-37250380 | Msa0729600:intron | 40.0% | |
| ATGGGATTTATGTTGAGGGT+AGG | - | chr5_1:37250609-37250628 | Msa0729600:intron | 40.0% | |
| TTTATGTTGAGGGTAGGCAT+TGG | - | chr5_1:37250615-37250634 | Msa0729600:intron | 40.0% | |
| !! | GGCATTGGTGAGATTAGAAT+CGG | - | chr5_1:37250630-37250649 | Msa0729600:intron | 40.0% |
| GTCTTGGTCTCTTGATATCT+AGG | - | chr5_1:37250657-37250676 | Msa0729600:intron | 40.0% | |
| !! | CGAGAAGTATTGTTTGTGAG+GGG | - | chr5_1:37250771-37250790 | Msa0729600:intron | 40.0% |
| CCCCTACTAAGTAAACTGAT+GGG | + | chr5_1:37250914-37250933 | None:intergenic | 40.0% | |
| CCCATCAGTTTACTTAGTAG+GGG | - | chr5_1:37250911-37250930 | Msa0729600:intron | 40.0% | |
| ACCCCTACTAAGTAAACTGA+TGG | + | chr5_1:37250915-37250934 | None:intergenic | 40.0% | |
| GTGTATTAGATGGAGGATAG+AGG | - | chr5_1:37251068-37251087 | Msa0729600:intron | 40.0% | |
| AGGATAGAGGTCAAACTATC+TGG | - | chr5_1:37251081-37251100 | Msa0729600:intron | 40.0% | |
| ! | CATTAGACTTGGTCCATCAT+AGG | - | chr5_1:37251119-37251138 | Msa0729600:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | + | chr5_1:37251186-37251205 | None:intergenic | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr5_1:37251188-37251207 | None:intergenic | 40.0% |
| ! | TTTGCGAGAAATGCGTTTTG+GGG | - | chr5_1:37251611-37251630 | Msa0729600:intron | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | - | chr5_1:37251626-37251645 | Msa0729600:intron | 40.0% |
| CGCTATTAACTACTCTGCAT+AGG | - | chr5_1:37251914-37251933 | Msa0729600:intron | 40.0% | |
| AGATTGCAGGCTAAATAGGT+GGG | + | chr5_1:37251985-37252004 | None:intergenic | 40.0% | |
| CAACAGATTGCAGGCTAAAT+AGG | + | chr5_1:37251989-37252008 | None:intergenic | 40.0% | |
| CTGATGTAACAACAGATTGC+AGG | + | chr5_1:37251998-37252017 | None:intergenic | 40.0% | |
| ATTTGATCCATCTGATCAGG+AGG | - | chr5_1:37252315-37252334 | Msa0729600:intron | 40.0% | |
| CAAATTACCTCCTGATCAGA+TGG | + | chr5_1:37252325-37252344 | None:intergenic | 40.0% | |
| CATCTGATCAGGAGGTAATT+TGG | - | chr5_1:37252323-37252342 | Msa0729600:intron | 40.0% | |
| TTGCTTGCAAAATGTGGTGT+TGG | - | chr5_1:37252349-37252368 | Msa0729600:intron | 40.0% | |
| ATGTCAGGTGTTAAGCAAGA+TGG | - | chr5_1:37252537-37252556 | Msa0729600:intron | 40.0% | |
| AATTGCTCTGTGGAAGAAGT+GGG | + | chr5_1:37252571-37252590 | None:intergenic | 40.0% | |
| TAATTGCTCTGTGGAAGAAG+TGG | + | chr5_1:37252572-37252591 | None:intergenic | 40.0% | |
| CTTCTTCCACAGAGCAATTA+AGG | - | chr5_1:37252572-37252591 | Msa0729600:intron | 40.0% | |
| AGGCTTATAATACTGGCACT+CGG | - | chr5_1:37252592-37252611 | Msa0729600:intron | 40.0% | |
| TGAACCCCATTCAAGATTAC+TGG | + | chr5_1:37252684-37252703 | None:intergenic | 40.0% | |
| GTTCTGTATATGAGTAGTGC+AGG | - | chr5_1:37252726-37252745 | Msa0729600:intron | 40.0% | |
| AGGAACAGAAGAGGATGAAA+AGG | - | chr5_1:37252797-37252816 | Msa0729600:intron | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | - | chr5_1:37252801-37252820 | Msa0729600:CDS | 40.0% | |
| CAGTATTCGGATGTAGATCT+AGG | - | chr5_1:37252981-37253000 | Msa0729600:CDS | 40.0% | |
| ! | TTTAAGGTTTACCTGGGGAA+TGG | + | chr5_1:37253021-37253040 | None:intergenic | 40.0% |
| ACACTACACACTAGAGTTCA+TGG | + | chr5_1:37253095-37253114 | None:intergenic | 40.0% | |
| GATAATGAGTACTCAGTAGC+AGG | - | chr5_1:37253145-37253164 | Msa0729600:CDS | 40.0% | |
| TAATGAGTACTCAGTAGCAG+GGG | - | chr5_1:37253147-37253166 | Msa0729600:CDS | 40.0% | |
| ACCCATGACCACATGTTTAA+AGG | - | chr5_1:37254270-37254289 | Msa0729600:intron | 40.0% | |
| CCCTTTAAACATGTGGTCAT+GGG | + | chr5_1:37254274-37254293 | None:intergenic | 40.0% | |
| CCCATGACCACATGTTTAAA+GGG | - | chr5_1:37254271-37254290 | Msa0729600:intron | 40.0% | |
| TCCCTTTAAACATGTGGTCA+TGG | + | chr5_1:37254275-37254294 | None:intergenic | 40.0% | |
| TTTGGGTCCCTTTAAACATG+TGG | + | chr5_1:37254281-37254300 | None:intergenic | 40.0% | |
| ! | GTCCAAGTGGTAAGAGTTTT+GGG | + | chr5_1:37254298-37254317 | None:intergenic | 40.0% |
| ! | AGTCCAAGTGGTAAGAGTTT+TGG | + | chr5_1:37254299-37254318 | None:intergenic | 40.0% |
| AGTATTCCTACTACTGAGCA+GGG | + | chr5_1:37254687-37254706 | None:intergenic | 40.0% | |
| TTAAGCCCACTAGTGAGAAA+AGG | - | chr5_1:37254861-37254880 | Msa0729600:intron | 40.0% | |
| TGAGCTTAGCTCAGTTTGTA+GGG | - | chr5_1:37254921-37254940 | Msa0729600:intron | 40.0% | |
| !!! | AACTTTTTTTTGGTGGTGGC+CGG | + | chr5_1:37254984-37255003 | None:intergenic | 40.0% |
| CTGTAGTATCTTTCTTCTGC+TGG | - | chr5_1:37255104-37255123 | Msa0729600:intron | 40.0% | |
| ACTTCAACAGTCTCCCTTAA+TGG | - | chr5_1:37255243-37255262 | Msa0729600:intron | 40.0% | |
| TCATCCAGACAATTCATCTG+AGG | + | chr5_1:37255486-37255505 | None:intergenic | 40.0% | |
| TTTGCTTGCTCTTCACAATG+AGG | + | chr5_1:37255516-37255535 | None:intergenic | 40.0% | |
| !! | ATGCTGATGATGGCCAAAAA+TGG | - | chr5_1:37255595-37255614 | Msa0729600:intron | 40.0% |
| ! | CTGTTCCATCACACCATTTT+TGG | + | chr5_1:37255611-37255630 | None:intergenic | 40.0% |
| !! | ATCCTGATGATGGCCAAAAA+TGG | - | chr5_1:37255646-37255665 | Msa0729600:intron | 40.0% |
| !! | TGATGATGGCCAAAAATGGT+GGG | - | chr5_1:37255599-37255618 | Msa0729600:intron | 40.0% |
| TCTGTTGGATTCACAACAAC+TGG | - | chr5_1:37255689-37255708 | Msa0729600:intron | 40.0% | |
| CATAAATAGAAAGGCTGGGT+TGG | + | chr5_1:37255794-37255813 | None:intergenic | 40.0% | |
| CTGAGCATAAATAGAAAGGC+TGG | + | chr5_1:37255799-37255818 | None:intergenic | 40.0% | |
| ATATCCTTCTTCAGATGCTC+TGG | + | chr5_1:37255828-37255847 | None:intergenic | 40.0% | |
| TGTAGAGAATGACACACCTT+CGG | - | chr5_1:37255896-37255915 | Msa0729600:intron | 40.0% | |
| GGAGTTTCGACTAAGTCAAT+TGG | - | chr5_1:37255917-37255936 | Msa0729600:intron | 40.0% | |
| AGAAATCTGCATCTCAGATG+AGG | + | chr5_1:37256090-37256109 | None:intergenic | 40.0% | |
| AGAAGCAACAGTTAGGTTTG+CGG | + | chr5_1:37256160-37256179 | None:intergenic | 40.0% | |
| AGAAAGACACAGCGAGAAAG+AGG | - | chr5_1:37249512-37249531 | Msa0729600:three_prime_UTR | 45.0% | |
| GAAAGACACAGCGAGAAAGA+GGG | - | chr5_1:37249513-37249532 | Msa0729600:three_prime_UTR | 45.0% | |
| ATCAAGTCTCTCCTCTATGG+CGG | - | chr5_1:37249580-37249599 | Msa0729600:three_prime_UTR | 45.0% | |
| ! | CTTTTGTCCACTAGCCATGA+TGG | + | chr5_1:37250284-37250303 | None:intergenic | 45.0% |
| ATTGTTTGTGAGGGGCCATT+TGG | - | chr5_1:37250779-37250798 | Msa0729600:intron | 45.0% | |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr5_1:37251182-37251201 | None:intergenic | 45.0% |
| CGACCCCAAAAATGCTATAG+CGG | - | chr5_1:37251180-37251199 | Msa0729600:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | - | chr5_1:37251181-37251200 | Msa0729600:intron | 45.0% | |
| ! | AAAGCAACGACGGCGTTTTA+CGG | - | chr5_1:37251562-37251581 | Msa0729600:intron | 45.0% |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr5_1:37251648-37251667 | Msa0729600:intron | 45.0% | |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr5_1:37251791-37251810 | Msa0729600:intron | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr5_1:37251829-37251848 | Msa0729600:intron | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | + | chr5_1:37251905-37251924 | None:intergenic | 45.0% | |
| CAGATTGCAGGCTAAATAGG+TGG | + | chr5_1:37251986-37252005 | None:intergenic | 45.0% | |
| AAGGTTGTAAAAGAGTGGCC+TGG | - | chr5_1:37252274-37252293 | Msa0729600:intron | 45.0% | |
| ! | TTGACACCTTTTGGCAAACC+AGG | + | chr5_1:37252295-37252314 | None:intergenic | 45.0% |
| TGGCACTTGCTTGCAAAATG+TGG | - | chr5_1:37252343-37252362 | Msa0729600:intron | 45.0% | |
| AACTCGTCAACGAAAGGATG+AGG | + | chr5_1:37252385-37252404 | None:intergenic | 45.0% | |
| ACTCATCCTCAAAACTTGCC+AGG | - | chr5_1:37252442-37252461 | Msa0729600:intron | 45.0% | |
| ATCCTCAAAACTTGCCAGGT+TGG | - | chr5_1:37252446-37252465 | Msa0729600:intron | 45.0% | |
| TAAAACGCAAGTCACCAACC+TGG | + | chr5_1:37252463-37252482 | None:intergenic | 45.0% | |
| GCGCCGAAAAATACATGATC+AGG | - | chr5_1:37252617-37252636 | Msa0729600:intron | 45.0% | |
| !! | TTCTTCCAGTTTTGTGCCAG+CGG | + | chr5_1:37252656-37252675 | None:intergenic | 45.0% |
| CTGTATATGAGTAGTGCAGG+AGG | - | chr5_1:37252729-37252748 | Msa0729600:intron | 45.0% | |
| TATATGAGTAGTGCAGGAGG+AGG | - | chr5_1:37252732-37252751 | Msa0729600:intron | 45.0% | |
| CAACAGCAGCAAGTCAAACT+GGG | - | chr5_1:37252852-37252871 | Msa0729600:CDS | 45.0% | |
| GCAAGTCAAACTGGGTGATA+AGG | - | chr5_1:37252860-37252879 | Msa0729600:CDS | 45.0% | |
| GTCACAGATTTGGGAGTAAC+CGG | + | chr5_1:37252936-37252955 | None:intergenic | 45.0% | |
| CTTTCACTATAAGGAGGCTC+AGG | + | chr5_1:37252960-37252979 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | - | chr5_1:37253395-37253414 | Msa0729600:CDS | 45.0% | |
| GACCCAAAACTCTTACCACT+TGG | - | chr5_1:37254293-37254312 | Msa0729600:intron | 45.0% | |
| GTATTCCTACTACTGAGCAG+GGG | + | chr5_1:37254686-37254705 | None:intergenic | 45.0% | |
| GAGTATTCCTACTACTGAGC+AGG | + | chr5_1:37254688-37254707 | None:intergenic | 45.0% | |
| GTGAGCTTAGCTCAGTTTGT+AGG | - | chr5_1:37254920-37254939 | Msa0729600:intron | 45.0% | |
| !!! | ACTTTTTTTTGGTGGTGGCC+GGG | + | chr5_1:37254983-37255002 | None:intergenic | 45.0% |
| ACAGTACGTACATGCTAGGA+GGG | + | chr5_1:37255009-37255028 | None:intergenic | 45.0% | |
| CAACACAGTACGTACATGCT+AGG | + | chr5_1:37255013-37255032 | None:intergenic | 45.0% | |
| CTAGCATGTACGTACTGTGT+TGG | - | chr5_1:37255011-37255030 | Msa0729600:intron | 45.0% | |
| CCACCTATAGGCCTTAATTG+CGG | - | chr5_1:37255055-37255074 | Msa0729600:intron | 45.0% | |
| ATGCCGCAATTAAGGCCTAT+AGG | + | chr5_1:37255061-37255080 | None:intergenic | 45.0% | |
| GCTCAAAGATGCCGCAATTA+AGG | + | chr5_1:37255069-37255088 | None:intergenic | 45.0% | |
| ! | AGGAGTGTAACATAGCCACT+TGG | - | chr5_1:37255320-37255339 | Msa0729600:intron | 45.0% |
| CAATTCATCTGAGGAGGCTT+CGG | + | chr5_1:37255477-37255496 | None:intergenic | 45.0% | |
| TCCAGACAATTCATCTGAGG+AGG | + | chr5_1:37255483-37255502 | None:intergenic | 45.0% | |
| GATGGCCAAAAATGGTGTGA+TGG | - | chr5_1:37255603-37255622 | Msa0729600:intron | 45.0% | |
| !!! | CACCATTTTTGGCCATCATC+AGG | + | chr5_1:37255600-37255619 | None:intergenic | 45.0% |
| !! | CTGATGATGGCCAAAAATGG+TGG | - | chr5_1:37255598-37255617 | Msa0729600:intron | 45.0% |
| TACCATCTCTAGTAGGAGAC+TGG | + | chr5_1:37255752-37255771 | None:intergenic | 45.0% | |
| ACTCTGCATTTGAAGGCTCA+AGG | + | chr5_1:37255872-37255891 | None:intergenic | 45.0% | |
| TGACTTAGTCGAAACTCCGA+AGG | + | chr5_1:37255915-37255934 | None:intergenic | 45.0% | |
| GAAGCAACAGTTAGGTTTGC+GGG | + | chr5_1:37256159-37256178 | None:intergenic | 45.0% | |
| !! | ATTTATGTTAAATAAAATAT+TGG | + | chr5_1:37253737-37253756 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTGATAAAAAAA+AGG | - | chr5_1:37254025-37254044 | Msa0729600:intron | 5.0% |
| !! | ATAAAATAAAATAAAAAAAG+GGG | - | chr5_1:37254612-37254631 | Msa0729600:intron | 5.0% |
| TCAAGTCTCTCCTCTATGGC+GGG | - | chr5_1:37249581-37249600 | Msa0729600:three_prime_UTR | 50.0% | |
| TGTTACATACCCCGCCATAG+AGG | + | chr5_1:37249594-37249613 | None:intergenic | 50.0% | |
| ATGCAGACCATCATGGCTAG+TGG | - | chr5_1:37250274-37250293 | Msa0729600:CDS | 50.0% | |
| CAATTTGGGCAAGCCTTGGT+AGG | + | chr5_1:37250377-37250396 | None:intergenic | 50.0% | |
| CTGACAATTTGGGCAAGCCT+TGG | + | chr5_1:37250381-37250400 | None:intergenic | 50.0% | |
| CTCTACCAGACCAAGCCAAA+TGG | + | chr5_1:37250797-37250816 | None:intergenic | 50.0% | |
| !! | AGGGGTTTTTGAGCACCATG+TGG | - | chr5_1:37250929-37250948 | Msa0729600:intron | 50.0% |
| GAAATAGCGGTCATAGCGCT+AGG | + | chr5_1:37251213-37251232 | None:intergenic | 50.0% | |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr5_1:37251817-37251836 | None:intergenic | 50.0% |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr5_1:37251828-37251847 | None:intergenic | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr5_1:37251844-37251863 | Msa0729600:intron | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr5_1:37251849-37251868 | None:intergenic | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr5_1:37251849-37251868 | Msa0729600:intron | 50.0% | |
| ! | CACCAACCTGGCAAGTTTTG+AGG | + | chr5_1:37252451-37252470 | None:intergenic | 50.0% |
| !! | CCAGTTTGACTTGCTGCTGT+TGG | + | chr5_1:37252854-37252873 | None:intergenic | 50.0% |
| CCAACAGCAGCAAGTCAAAC+TGG | - | chr5_1:37252851-37252870 | Msa0729600:CDS | 50.0% | |
| GGCTCAGGAGTCACAGATTT+GGG | + | chr5_1:37252945-37252964 | None:intergenic | 50.0% | |
| AGGCTCAGGAGTCACAGATT+TGG | + | chr5_1:37252946-37252965 | None:intergenic | 50.0% | |
| AAGGTTTACCTGGGGAATGG+CGG | + | chr5_1:37253018-37253037 | None:intergenic | 50.0% | |
| AGCATGATACCCGTGCATAC+GGG | - | chr5_1:37253396-37253415 | Msa0729600:CDS | 50.0% | |
| ! | GTGGTCATGGGTTTGTTTCG+TGG | + | chr5_1:37254262-37254281 | None:intergenic | 50.0% |
| AAAAAAAGGGGGACCTAGGC+TGG | - | chr5_1:37254624-37254643 | Msa0729600:intron | 50.0% | |
| ACCTCTTCAAGGCACAGTGT+GGG | + | chr5_1:37254660-37254679 | None:intergenic | 50.0% | |
| CAAACTGAGCTAAGCTCACG+AGG | + | chr5_1:37254919-37254938 | None:intergenic | 50.0% | |
| !!! | CTTTTTTTTGGTGGTGGCCG+GGG | + | chr5_1:37254982-37255001 | None:intergenic | 50.0% |
| CACAGTACGTACATGCTAGG+AGG | + | chr5_1:37255010-37255029 | None:intergenic | 50.0% | |
| CCGCAATTAAGGCCTATAGG+TGG | + | chr5_1:37255058-37255077 | None:intergenic | 50.0% | |
| GCCTCCTCAGATGAATTGTC+TGG | - | chr5_1:37255479-37255498 | Msa0729600:CDS | 50.0% | |
| AGCCAGTCTCCTACTAGAGA+TGG | - | chr5_1:37255747-37255766 | Msa0729600:intron | 50.0% | |
| ! | AGGACCAGAGCATCTGAAGA+AGG | - | chr5_1:37255821-37255840 | Msa0729600:intron | 50.0% |
| CAAGTCTCTCCTCTATGGCG+GGG | - | chr5_1:37249582-37249601 | Msa0729600:three_prime_UTR | 55.0% | |
| ! | TGCATCGGGAGCATGTGATC+CGG | - | chr5_1:37250328-37250347 | Msa0729600:intron | 55.0% |
| TTGTGAGGGGCCATTTGGCT+TGG | - | chr5_1:37250784-37250803 | Msa0729600:intron | 55.0% | |
| ! | GAGTGGCCTGGTTTGCCAAA+AGG | - | chr5_1:37252286-37252305 | Msa0729600:intron | 55.0% |
| AGGTTTACCTGGGGAATGGC+GGG | + | chr5_1:37253017-37253036 | None:intergenic | 55.0% | |
| TGAGTACTCAGTAGCAGGGG+CGG | - | chr5_1:37253150-37253169 | Msa0729600:CDS | 55.0% | |
| ATATCTAACCCGGGCAACGC+CGG | - | chr5_1:37254483-37254502 | Msa0729600:intron | 55.0% | |
| TCCCACACTGTGCCTTGAAG+AGG | - | chr5_1:37254656-37254675 | Msa0729600:intron | 55.0% | |
| GACCTCTTCAAGGCACAGTG+TGG | + | chr5_1:37254661-37254680 | None:intergenic | 55.0% | |
| TTCCTACTACTGAGCAGGGG+CGG | + | chr5_1:37254683-37254702 | None:intergenic | 55.0% | |
| AGCTCACGAGGACGCTATGA+GGG | + | chr5_1:37254907-37254926 | None:intergenic | 55.0% | |
| AAGCTCACGAGGACGCTATG+AGG | + | chr5_1:37254908-37254927 | None:intergenic | 55.0% | |
| AATGTCCGGGGTTCAAACCC+CGG | - | chr5_1:37254962-37254981 | Msa0729600:intron | 55.0% | |
| !! | AGGGGCCATTTGGCTTGGTC+TGG | - | chr5_1:37250789-37250808 | Msa0729600:intron | 60.0% |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr5_1:37251895-37251914 | None:intergenic | 60.0% | |
| AGGATTTGGGTGACGTCCGC+TGG | - | chr5_1:37252637-37252656 | Msa0729600:intron | 60.0% | |
| GACGTCCGCTGGCACAAAAC+TGG | - | chr5_1:37252648-37252667 | Msa0729600:intron | 60.0% | |
| ! | CTCAGTAGCAGGGGCGGATT+TGG | - | chr5_1:37253156-37253175 | Msa0729600:CDS | 60.0% |
| TGCTCACTCGCCCGTATGCA+CGG | + | chr5_1:37253409-37253428 | None:intergenic | 60.0% | |
| TATCTAACCCGGGCAACGCC+GGG | - | chr5_1:37254484-37254503 | Msa0729600:intron | 60.0% | |
| TTTAGAGACCCGGCGTTGCC+CGG | + | chr5_1:37254495-37254514 | None:intergenic | 60.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr5_1:37251156-37251175 | Msa0729600:intron | 65.0% |
| GCGGCCGCAACACTGCATAG+CGG | + | chr5_1:37251798-37251817 | None:intergenic | 65.0% | |
| AGACACACCCGCCATTCCCC+AGG | - | chr5_1:37253007-37253026 | Msa0729600:CDS | 65.0% | |
| GCTCACTCGCCCGTATGCAC+GGG | + | chr5_1:37253408-37253427 | None:intergenic | 65.0% | |
| TTAGAGACCCGGCGTTGCCC+GGG | + | chr5_1:37254494-37254513 | None:intergenic | 65.0% | |
| AAGGGGGACCTAGGCTGGTG+TGG | - | chr5_1:37254629-37254648 | Msa0729600:intron | 65.0% | |
| !! | GGGAAGTGCCACACCAGCCT+AGG | + | chr5_1:37254640-37254659 | None:intergenic | 65.0% |
| AGCAGGGGCGGACCTCTTCA+AGG | + | chr5_1:37254671-37254690 | None:intergenic | 65.0% | |
| GTCCGCCCCTGCTCAGTAGT+AGG | - | chr5_1:37254678-37254697 | Msa0729600:intron | 65.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr5_1:37254970-37254989 | None:intergenic | 70.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr5_1:37251882-37251901 | None:intergenic | 75.0% | |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr5_1:37251887-37251906 | None:intergenic | 75.0% | |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr5_1:37251871-37251890 | None:intergenic | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr5_1:37251869-37251888 | Msa0729600:intron | 80.0% |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr5_1:37251879-37251898 | Msa0729600:intron | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr5_1:37251877-37251896 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 37249462 | 37256364 | 37249462 | ID=Msa0729600;Name=Msa0729600 |
| chr5_1 | mRNA | 37249462 | 37256364 | 37249462 | ID=Msa0729600-mRNA-1;Parent=Msa0729600;Name=Msa0729600-mRNA-1;_AED=0.01;_eAED=0.01;_QI=134|1|1|1|1|1|6|290|445 |
| chr5_1 | exon | 37249462 | 37249808 | 37249462 | ID=Msa0729600-mRNA-1:exon:11248;Parent=Msa0729600-mRNA-1 |
| chr5_1 | exon | 37249888 | 37250346 | 37249888 | ID=Msa0729600-mRNA-1:exon:11247;Parent=Msa0729600-mRNA-1 |
| chr5_1 | exon | 37252798 | 37253282 | 37252798 | ID=Msa0729600-mRNA-1:exon:11246;Parent=Msa0729600-mRNA-1 |
| chr5_1 | exon | 37253363 | 37253549 | 37253363 | ID=Msa0729600-mRNA-1:exon:11245;Parent=Msa0729600-mRNA-1 |
| chr5_1 | exon | 37255405 | 37255546 | 37255405 | ID=Msa0729600-mRNA-1:exon:11244;Parent=Msa0729600-mRNA-1 |
| chr5_1 | exon | 37256223 | 37256364 | 37256223 | ID=Msa0729600-mRNA-1:exon:11243;Parent=Msa0729600-mRNA-1 |
| chr5_1 | five_prime_UTR | 37256231 | 37256364 | 37256231 | ID=Msa0729600-mRNA-1:five_prime_utr;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37256223 | 37256230 | 37256223 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37255405 | 37255546 | 37255405 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37253363 | 37253549 | 37253363 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37252798 | 37253282 | 37252798 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37249888 | 37250346 | 37249888 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | CDS | 37249752 | 37249808 | 37249752 | ID=Msa0729600-mRNA-1:cds;Parent=Msa0729600-mRNA-1 |
| chr5_1 | three_prime_UTR | 37249462 | 37249751 | 37249462 | ID=Msa0729600-mRNA-1:three_prime_utr;Parent=Msa0729600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
