AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0731250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731250 MtrunA17_Chr3g0134451 42.797 236 108 4 1 221 1 224 3.65e-52 178
Msa0731250 MtrunA17_Chr5g0425181 61.314 137 4 2 128 215 15 151 5.80e-45 154
Msa0731250 MtrunA17_Chr5g0425181 88.571 70 7 1 323 391 15 84 1.25e-31 119
Msa0731250 MtrunA17_Chr5g0425191 90.278 72 6 1 1 71 1 72 1.03e-36 130
Msa0731250 MtrunA17_Chr4g0044071 95.161 62 3 0 1 62 1 62 4.50e-34 123
Msa0731250 MtrunA17_Chr3g0077501 36.464 181 76 3 1 181 1 142 3.70e-24 100
Msa0731250 MtrunA17_Chr3g0097101 34.536 194 87 4 1 194 16 169 1.44e-23 99.0
Msa0731250 MtrunA17_Chr4g0060841 36.313 179 97 6 1 177 1 164 2.01e-23 100
Msa0731250 MtrunA17_Chr7g0246381 70.690 58 17 0 1 58 1 58 7.63e-23 91.7
Msa0731250 MtrunA17_Chr2g0284911 61.429 70 26 1 1 70 16 84 1.06e-22 97.1
Msa0731250 MtrunA17_Chr5g0417661 66.129 62 21 0 1 62 56 117 3.54e-22 91.7
Msa0731250 MtrunA17_Chr7g0246431 37.017 181 96 6 1 177 1 167 6.12e-22 93.6
Msa0731250 MtrunA17_Chr8g0380021 61.429 70 26 1 1 70 17 85 7.22e-22 94.4
Msa0731250 MtrunA17_Chr7g0220111 58.571 70 29 0 1 70 1 70 1.69e-21 93.2
Msa0731250 MtrunA17_Chr5g0420091 57.143 70 30 0 1 70 1 70 1.91e-21 92.4
Msa0731250 MtrunA17_Chr5g0425171 91.111 45 4 0 400 444 35 79 2.26e-21 87.8
Msa0731250 MtrunA17_Chr5g0425171 86.792 53 5 1 250 300 1 53 1.44e-14 68.6
Msa0731250 MtrunA17_Chr4g0061671 57.143 70 30 0 1 70 1 70 4.87e-21 90.5
Msa0731250 MtrunA17_Chr8g0351041 60.000 70 27 1 1 70 1 69 5.13e-21 89.7
Msa0731250 MtrunA17_Chr1g0173161 63.934 61 22 0 1 61 1 61 5.30e-21 87.0
Msa0731250 MtrunA17_Chr3g0122251 58.571 70 29 0 1 70 1 70 5.63e-21 91.7
Msa0731250 MtrunA17_Chr4g0061691 36.994 173 98 4 1 172 1 163 7.58e-21 90.9
Msa0731250 MtrunA17_Chr6g0455511 58.571 70 29 0 1 70 1 70 8.14e-21 91.3
Msa0731250 MtrunA17_Chr8g0351031 60.000 70 27 1 1 70 1 69 9.79e-21 90.5
Msa0731250 MtrunA17_Chr8g0377561 66.667 57 19 0 1 57 1 57 1.11e-20 86.7
Msa0731250 MtrunA17_Chr8g0351051 60.000 70 27 1 1 70 1 69 1.30e-20 90.9
Msa0731250 MtrunA17_Chr4g0020221 53.488 86 35 2 1 84 1 83 2.43e-20 90.1
Msa0731250 MtrunA17_Chr5g0412461 30.233 258 133 8 1 257 1 212 2.64e-20 89.4
Msa0731250 MtrunA17_Chr7g0220121 32.597 181 82 2 1 181 1 141 3.15e-20 89.7
Msa0731250 MtrunA17_Chr8g0366231 37.572 173 97 5 1 172 1 163 6.94e-20 88.6
Msa0731250 MtrunA17_Chr2g0279821 33.702 181 80 3 1 181 1 141 8.26e-20 88.2
Msa0731250 MtrunA17_Chr4g0057151 58.571 70 28 1 1 70 1 69 1.30e-19 87.0
Msa0731250 MtrunA17_Chr5g0427921 57.377 61 26 0 1 61 1 61 1.59e-19 82.0
Msa0731250 MtrunA17_Chr6g0474371 52.857 70 33 0 1 70 1 70 4.92e-19 84.7
Msa0731250 MtrunA17_Chr3g0125241 53.521 71 32 1 1 70 26 96 5.32e-19 85.1
Msa0731250 MtrunA17_Chr5g0419601 39.837 123 60 3 1 123 8 116 6.90e-19 85.5
Msa0731250 MtrunA17_Chr1g0164791 54.930 71 31 1 1 70 1 71 8.48e-19 85.1
Msa0731250 MtrunA17_Chr5g0412271 65.517 58 20 0 1 58 1 58 9.62e-19 85.1
Msa0731250 MtrunA17_Chr2g0308251 58.621 58 24 0 1 58 1 58 1.34e-18 80.5
Msa0731250 MtrunA17_Chr5g0411691 38.806 134 71 4 1 127 1 130 1.41e-18 84.7
Msa0731250 MtrunA17_Chr5g0420081 54.286 70 32 0 1 70 1 70 1.53e-18 84.7
Msa0731250 MtrunA17_Chr2g0317451 34.444 180 93 6 2 180 9 164 2.35e-18 84.0
Msa0731250 MtrunA17_Chr2g0317481 34.444 180 93 6 2 180 9 164 2.62e-18 84.0
Msa0731250 MtrunA17_Chr5g0404951 64.912 57 20 0 1 57 1 57 3.22e-18 83.6
Msa0731250 MtrunA17_Chr4g0049541 53.333 75 34 1 1 75 1 74 4.52e-18 82.8
Msa0731250 MtrunA17_Chr3g0142191 63.158 57 21 0 1 57 1 57 5.64e-18 82.8
Msa0731250 MtrunA17_Chr8g0379021 53.521 71 32 1 2 72 12 81 1.16e-17 80.5
Msa0731250 MtrunA17_Chr5g0427401 50.000 70 34 1 1 70 1 69 2.22e-17 80.9
Msa0731250 MtrunA17_Chr1g0208581 45.882 85 45 1 2 86 9 92 2.96e-17 80.9
Msa0731250 MtrunA17_Chr4g0018421 41.379 87 51 0 1 87 1 87 4.29e-17 79.7
Msa0731250 MtrunA17_Chr1g0175601 30.857 175 80 4 1 170 1 139 6.24e-17 78.6
Msa0731250 MtrunA17_Chr8g0355091 44.706 85 46 1 2 86 9 92 7.35e-17 79.7
Msa0731250 MtrunA17_Chr1g0159661 49.296 71 35 1 1 70 1 71 7.80e-17 78.2
Msa0731250 MtrunA17_Chr1g0208561 51.389 72 34 1 2 73 9 79 8.67e-17 79.3
Msa0731250 MtrunA17_Chr1g0175611 49.315 73 36 1 1 73 1 72 8.73e-17 77.8
Msa0731250 MtrunA17_Chr3g0099421 53.521 71 32 1 2 72 34 103 9.34e-17 80.1
Msa0731250 MtrunA17_Chr3g0089141 51.389 72 34 1 2 73 9 79 1.19e-16 79.0
Msa0731250 MtrunA17_Chr1g0206701 43.529 85 47 1 2 86 9 92 1.40e-16 79.0
Msa0731250 MtrunA17_Chr2g0292791 44.706 85 46 1 2 86 9 92 2.15e-16 78.6
Msa0731250 MtrunA17_Chr1g0204111 60.345 58 23 0 1 58 17 74 2.52e-16 78.6
Msa0731250 MtrunA17_Chr2g0333981 52.113 71 33 1 1 71 11 80 2.97e-16 76.6
Msa0731250 MtrunA17_Chr3g0099411 43.529 85 47 1 2 86 9 92 3.22e-16 77.4
Msa0731250 MtrunA17_Chr1g0206721 43.529 85 47 1 2 86 9 92 3.88e-16 77.8
Msa0731250 MtrunA17_Chr8g0357771 49.367 79 35 2 1 75 1 78 4.14e-16 76.3
Msa0731250 MtrunA17_Chr4g0074101 53.521 71 32 1 1 71 1 70 4.54e-16 76.6
Msa0731250 MtrunA17_Chr2g0325971 44.706 85 46 1 2 86 9 92 6.67e-16 76.6
Msa0731250 MtrunA17_Chr1g0206991 41.860 86 49 1 2 87 9 93 7.21e-16 75.5
Msa0731250 MtrunA17_Chr4g0049901 57.627 59 25 0 1 59 27 85 8.77e-16 76.6
Msa0731250 MtrunA17_Chr8g0376821 30.286 175 81 3 1 170 1 139 9.51e-16 75.1
Msa0731250 MtrunA17_Chr1g0188671 52.113 71 33 1 2 72 47 116 1.21e-15 77.0
Msa0731250 MtrunA17_Chr4g0018951 48.718 78 39 1 14 91 24 100 1.23e-15 74.7
Msa0731250 MtrunA17_Chr1g0149391 43.529 85 47 1 2 86 9 92 1.78e-15 75.9
Msa0731250 MtrunA17_Chr5g0422941 46.154 91 47 2 2 92 9 97 1.87e-15 75.9
Msa0731250 MtrunA17_Chr3g0089151 40.698 86 50 1 2 87 9 93 1.91e-15 72.8
Msa0731250 MtrunA17_Chr1g0169761 35.625 160 88 5 1 151 1 154 2.71e-15 73.9
Msa0731250 MtrunA17_Chr1g0187361 52.113 71 33 1 2 72 9 78 3.15e-15 75.1
Msa0731250 MtrunA17_Chr1g0166611 54.412 68 28 1 13 77 17 84 4.11e-15 72.0
Msa0731250 MtrunA17_Chr3g0119901 46.154 78 40 2 1 77 8 84 9.29e-15 73.2
Msa0731250 MtrunA17_Chr1g0180591 47.945 73 37 1 1 73 1 72 9.33e-15 72.4
Msa0731250 MtrunA17_Chr2g0300441 41.176 85 49 1 2 86 9 92 2.94e-14 72.0
Msa0731250 MtrunA17_Chr5g0422421 49.296 71 35 1 2 72 9 78 5.18e-14 71.6
Msa0731250 MtrunA17_Chr2g0300421 41.860 86 49 1 2 87 9 93 7.08e-14 69.7
Msa0731250 MtrunA17_Chr3g0085241 44.872 78 41 2 1 77 40 116 9.11e-14 70.9
Msa0731250 MtrunA17_Chr8g0356071 46.479 71 37 1 1 71 1 70 9.88e-14 68.9
Msa0731250 MtrunA17_Chr4g0044081 88.235 34 4 0 148 181 8 41 4.73e-13 64.3
Msa0731250 MtrunA17_Chr4g0052061 45.070 71 38 1 1 71 1 70 1.34e-12 65.5
Msa0731250 MtrunA17_Chr4g0052081 51.923 52 25 0 1 52 1 52 7.81e-12 63.9
Msa0731250 MtrunA17_Chr6g0457851 35.294 85 48 1 1 78 11 95 8.73e-12 66.2
Msa0731250 MtrunA17_Chr4g0071601 46.988 83 43 1 1 83 11 92 9.98e-12 63.5
Msa0731250 MtrunA17_Chr1g0206691 45.161 62 33 1 11 72 1 61 1.03e-11 64.3
Msa0731250 MtrunA17_Chr1g0187351 50.000 62 30 1 11 72 1 61 4.26e-11 58.5
Msa0731250 MtrunA17_Chr1g0212151 34.118 85 49 1 1 78 1 85 7.66e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731250 AT1G22130.1 55.247 324 109 8 1 298 1 314 2.34e-106 318
Msa0731250 AT1G77980.1 49.855 345 115 8 1 300 1 332 3.72e-97 295
Msa0731250 AT1G77950.3 64.481 183 63 1 1 181 1 183 1.63e-82 254
Msa0731250 AT1G77950.2 64.481 183 63 1 1 181 1 183 1.63e-82 254
Msa0731250 AT1G77950.1 64.481 183 63 1 1 181 1 183 1.63e-82 254
Msa0731250 AT1G77950.4 64.481 183 63 1 1 181 1 183 1.63e-82 254
Msa0731250 AT1G18750.4 40.476 168 79 5 1 167 1 148 3.37e-27 112
Msa0731250 AT1G18750.1 40.476 168 79 5 1 167 1 148 4.05e-27 112
Msa0731250 AT4G09960.2 34.737 190 85 3 1 190 1 151 1.40e-25 104
Msa0731250 AT4G37435.1 37.368 190 88 8 1 181 1 168 1.52e-25 103
Msa0731250 AT1G18750.3 47.414 116 48 3 1 115 1 104 4.03e-25 107
Msa0731250 AT4G09960.6 35.359 181 78 3 1 181 2 143 1.85e-24 101
Msa0731250 AT4G09960.1 35.359 181 78 3 1 181 1 142 2.00e-24 101
Msa0731250 AT4G09960.5 35.359 181 78 3 1 181 11 152 3.46e-24 100
Msa0731250 AT4G09960.3 35.359 181 78 3 1 181 27 168 5.61e-24 100
Msa0731250 AT4G09960.4 35.359 181 78 3 1 181 96 237 2.05e-23 100
Msa0731250 AT4G11880.2 37.143 210 94 7 1 203 1 179 3.17e-23 96.7
Msa0731250 AT4G11880.3 37.143 210 94 7 1 203 1 179 3.17e-23 96.7
Msa0731250 AT2G03060.3 33.516 182 106 4 1 181 1 168 3.38e-23 101
Msa0731250 AT2G03060.7 33.516 182 106 4 1 181 1 168 3.38e-23 101
Msa0731250 AT2G03060.1 33.516 182 106 4 1 181 1 168 3.38e-23 101
Msa0731250 AT1G69540.2 34.574 188 103 5 1 184 1 172 4.84e-23 100
Msa0731250 AT1G69540.1 34.574 188 103 5 1 184 1 172 5.63e-23 99.8
Msa0731250 AT2G03060.2 33.516 182 106 4 1 181 1 168 5.72e-23 100
Msa0731250 AT3G58780.2 67.213 61 20 0 1 61 16 76 3.69e-22 95.5
Msa0731250 AT4G18960.1 63.768 69 24 1 2 70 18 85 5.33e-22 95.1
Msa0731250 AT2G45660.2 37.500 160 83 6 1 156 1 147 5.65e-22 92.4
Msa0731250 AT2G42830.2 32.727 220 111 8 1 202 16 216 5.94e-22 95.1
Msa0731250 AT5G15800.1 36.066 183 88 6 1 173 1 164 6.95e-22 94.7
Msa0731250 AT2G45660.1 35.484 186 102 7 1 182 1 172 6.97e-22 94.0
Msa0731250 AT5G15800.2 36.066 183 88 6 1 173 1 164 7.34e-22 95.1
Msa0731250 AT2G45650.1 62.857 70 25 1 1 70 1 69 7.74e-22 94.7
Msa0731250 AT2G42830.1 32.569 218 112 8 1 202 16 214 7.96e-22 94.7
Msa0731250 AT3G58780.1 60.000 70 27 1 1 70 16 84 9.13e-22 94.4
Msa0731250 AT3G58780.5 60.000 70 27 1 1 70 22 90 1.04e-21 94.4
Msa0731250 AT4G11880.4 41.290 155 70 4 1 149 1 140 1.20e-21 93.6
Msa0731250 AT4G11880.1 41.290 155 70 4 1 149 1 140 1.20e-21 93.6
Msa0731250 AT3G58780.3 30.962 239 142 5 1 231 16 239 2.42e-21 94.0
Msa0731250 AT3G58780.4 60.000 70 27 1 1 70 16 84 2.78e-21 94.0
Msa0731250 AT5G10140.2 60.000 70 28 0 1 70 1 70 3.09e-21 90.9
Msa0731250 AT5G10140.1 60.000 70 28 0 1 70 1 70 4.14e-21 91.3
Msa0731250 AT5G10140.4 60.000 70 28 0 1 70 1 70 4.16e-21 90.9
Msa0731250 AT5G10140.3 60.000 70 28 0 1 70 1 70 5.05e-21 90.9
Msa0731250 AT4G22950.2 60.000 70 27 1 1 70 1 69 6.20e-21 90.1
Msa0731250 AT1G24260.3 58.571 70 29 0 1 70 1 70 8.14e-21 91.7
Msa0731250 AT3G57390.3 62.857 70 25 1 1 70 1 69 1.05e-20 90.9
Msa0731250 AT1G24260.1 34.831 178 99 6 1 173 1 166 1.08e-20 91.3
Msa0731250 AT1G24260.2 58.571 70 29 0 1 70 1 70 1.30e-20 91.3
Msa0731250 AT2G03710.3 35.385 195 100 10 1 187 1 177 1.43e-20 89.4
Msa0731250 AT2G03710.2 33.178 214 114 10 1 210 1 189 1.68e-20 90.9
Msa0731250 AT3G57390.1 62.857 70 25 1 1 70 1 69 1.84e-20 90.9
Msa0731250 AT3G02310.1 38.365 159 70 5 1 149 1 141 1.88e-20 90.9
Msa0731250 AT4G22950.3 60.000 70 27 1 1 70 1 69 2.11e-20 89.7
Msa0731250 AT4G22950.1 60.000 70 27 1 1 70 1 69 2.11e-20 89.7
Msa0731250 AT2G03710.1 33.178 214 114 10 1 210 1 189 2.12e-20 90.9
Msa0731250 AT3G02310.2 57.143 70 30 0 1 70 1 70 2.66e-20 89.0
Msa0731250 AT4G24540.1 34.921 189 70 5 1 182 1 143 2.91e-20 89.4
Msa0731250 AT5G51870.2 31.222 221 101 6 1 219 1 172 3.92e-20 87.8
Msa0731250 AT5G13790.1 59.722 72 28 1 1 72 1 71 4.23e-20 90.1
Msa0731250 AT5G13790.2 59.722 72 28 1 1 72 1 71 4.63e-20 90.1
Msa0731250 AT5G65070.1 58.571 70 29 0 1 70 1 70 5.39e-20 88.2
Msa0731250 AT5G62165.17 67.241 58 19 0 1 58 1 58 5.56e-20 87.0
Msa0731250 AT5G62165.12 67.241 58 19 0 1 58 1 58 5.56e-20 87.0
Msa0731250 AT5G62165.11 67.241 58 19 0 1 58 1 58 5.56e-20 87.0
Msa0731250 AT5G62165.14 67.241 58 19 0 1 58 1 58 5.78e-20 85.1
Msa0731250 AT3G30260.1 54.286 70 32 0 1 70 1 70 7.05e-20 89.0
Msa0731250 AT5G23260.3 56.471 85 31 2 1 79 1 85 7.23e-20 89.0
Msa0731250 AT3G57230.1 58.571 70 28 1 1 70 1 69 8.20e-20 88.6
Msa0731250 AT3G57230.4 58.571 70 28 1 1 70 1 69 8.20e-20 88.6
Msa0731250 AT1G26310.1 53.846 78 36 0 1 78 1 78 8.59e-20 89.0
Msa0731250 AT5G23260.2 56.471 85 31 2 1 79 1 85 8.87e-20 89.0
Msa0731250 AT3G61120.1 52.500 80 37 1 1 80 1 79 9.11e-20 88.6
Msa0731250 AT5G62165.6 67.241 58 19 0 1 58 1 58 9.26e-20 86.3
Msa0731250 AT5G62165.9 67.241 58 19 0 1 58 1 58 9.26e-20 86.3
Msa0731250 AT5G62165.7 67.241 58 19 0 1 58 1 58 9.26e-20 86.3
Msa0731250 AT5G62165.8 67.241 58 19 0 1 58 1 58 9.26e-20 86.3
Msa0731250 AT5G62165.13 67.241 58 19 0 1 58 1 58 9.26e-20 86.3
Msa0731250 AT5G60910.1 55.714 70 31 0 1 70 1 70 9.47e-20 88.6
Msa0731250 AT5G23260.4 56.471 85 31 2 1 79 17 101 1.12e-19 89.0
Msa0731250 AT5G23260.1 56.471 85 31 2 1 79 17 101 1.19e-19 89.0
Msa0731250 AT5G51870.5 31.222 221 101 6 1 219 24 195 1.49e-19 86.7
Msa0731250 AT5G65070.2 58.571 70 29 0 1 70 1 70 1.68e-19 87.4
Msa0731250 AT5G65070.5 58.571 70 29 0 1 70 1 70 1.71e-19 87.0
Msa0731250 AT1G69120.2 31.959 194 93 3 1 194 1 155 1.73e-19 87.8
Msa0731250 AT1G69120.1 31.959 194 93 3 1 194 1 155 2.28e-19 87.8
Msa0731250 AT5G62165.10 67.241 58 19 0 1 58 1 58 3.17e-19 85.9
Msa0731250 AT5G62165.4 67.241 58 19 0 1 58 1 58 3.17e-19 85.9
Msa0731250 AT5G62165.3 67.241 58 19 0 1 58 1 58 3.26e-19 86.3
Msa0731250 AT5G62165.1 67.241 58 19 0 1 58 1 58 3.26e-19 86.3
Msa0731250 AT5G62165.2 67.241 58 19 0 1 58 1 58 3.26e-19 86.3
Msa0731250 AT5G51870.1 46.847 111 44 4 1 111 1 96 3.83e-19 85.9
Msa0731250 AT3G57230.2 33.702 181 80 2 1 181 1 141 5.64e-19 83.6
Msa0731250 AT5G65070.4 58.571 70 29 0 1 70 1 70 6.57e-19 83.6
Msa0731250 AT3G54340.1 42.727 110 56 2 1 109 1 104 9.93e-19 85.5
Msa0731250 AT5G51870.4 46.847 111 44 4 1 111 1 96 1.07e-18 85.1
Msa0731250 AT5G65070.3 63.636 66 23 1 1 65 1 66 1.28e-18 85.1
Msa0731250 AT5G51870.3 46.847 111 44 4 1 111 11 106 1.33e-18 85.1
Msa0731250 AT2G14210.1 51.429 70 34 0 1 70 1 70 1.99e-18 84.7
Msa0731250 AT2G14210.2 51.429 70 34 0 1 70 1 70 2.39e-18 84.3
Msa0731250 AT4G37940.3 34.254 181 79 5 1 181 1 141 4.57e-18 82.0
Msa0731250 AT1G71692.1 44.444 81 45 0 1 81 1 81 5.01e-18 82.8
Msa0731250 AT2G22540.3 33.838 198 102 7 1 189 1 178 5.89e-18 83.6
Msa0731250 AT2G22540.1 33.838 198 102 7 1 189 1 178 5.89e-18 83.6
Msa0731250 AT5G65050.2 54.286 70 32 0 1 70 1 70 5.95e-18 81.6
Msa0731250 AT4G37940.4 34.254 181 79 5 1 181 1 141 6.04e-18 82.8
Msa0731250 AT4G37940.1 34.254 181 79 5 1 181 1 141 9.63e-18 82.4
Msa0731250 AT5G20240.2 62.963 54 20 0 1 54 1 54 1.55e-17 79.7
Msa0731250 AT5G65050.5 54.286 70 32 0 1 70 1 70 1.81e-17 80.5
Msa0731250 AT5G65050.1 54.286 70 32 0 1 70 1 70 1.87e-17 80.5
Msa0731250 AT5G65050.3 54.286 70 32 0 1 70 1 70 2.08e-17 80.9
Msa0731250 AT5G51860.2 55.714 70 30 1 1 70 1 69 2.73e-17 80.5
Msa0731250 AT5G20240.1 59.649 57 23 0 1 57 1 57 3.12e-17 80.5
Msa0731250 AT5G51860.1 55.714 70 30 1 1 70 1 69 3.28e-17 80.5
Msa0731250 AT2G22540.2 33.838 198 97 8 1 189 1 173 1.12e-16 79.7
Msa0731250 AT1G31140.2 40.741 108 63 1 1 107 1 108 2.30e-16 78.2
Msa0731250 AT5G65060.2 52.857 70 33 0 1 70 1 70 2.39e-16 77.4
Msa0731250 AT5G65060.1 52.857 70 33 0 1 70 1 70 2.48e-16 77.8
Msa0731250 AT5G65060.3 52.857 70 33 0 1 70 1 70 2.64e-16 77.4
Msa0731250 AT2G22630.1 58.621 58 24 0 1 58 1 58 3.34e-16 78.2
Msa0731250 AT2G22630.2 58.621 58 24 0 1 58 1 58 3.34e-16 78.2
Msa0731250 AT5G65080.3 50.000 70 35 0 1 70 8 77 1.08e-15 75.9
Msa0731250 AT1G31140.1 53.521 71 32 1 1 70 1 71 2.13e-15 75.5
Msa0731250 AT5G60440.1 28.311 219 136 7 2 219 7 205 8.36e-15 75.1
Msa0731250 AT2G26320.1 46.250 80 42 1 1 79 17 96 9.83e-15 70.5
Msa0731250 AT5G65080.2 53.968 63 29 0 1 63 8 70 1.68e-14 72.4
Msa0731250 AT1G77080.11 55.714 70 31 0 1 70 1 70 5.08e-14 70.5
Msa0731250 AT1G77080.5 55.714 70 31 0 1 70 1 70 6.19e-14 70.1
Msa0731250 AT3G66656.1 43.056 72 40 1 1 72 1 71 8.82e-14 69.7
Msa0731250 AT1G77080.4 55.714 70 31 0 1 70 1 70 9.16e-14 70.1
Msa0731250 AT1G01530.1 53.448 58 27 0 1 58 6 63 1.35e-13 70.9
Msa0731250 AT2G24840.1 47.222 72 37 1 1 72 62 132 2.08e-13 70.5
Msa0731250 AT1G77080.8 55.714 70 31 0 1 70 1 70 2.12e-13 69.7
Msa0731250 AT1G77080.12 77.500 40 9 0 1 40 1 40 2.72e-13 67.8
Msa0731250 AT1G47760.1 55.769 52 23 0 1 52 1 52 3.74e-13 68.2
Msa0731250 AT1G77080.2 77.500 40 9 0 1 40 1 40 5.93e-13 67.8
Msa0731250 AT1G72350.1 48.571 70 33 1 2 71 43 109 1.01e-12 67.8
Msa0731250 AT4G36590.1 47.887 71 36 1 2 72 7 76 1.43e-12 67.8
Msa0731250 AT2G34440.1 40.845 71 41 1 1 71 1 70 1.88e-12 65.9
Msa0731250 AT1G65360.1 50.000 58 29 0 1 58 6 63 4.12e-12 66.2

Find 79 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGTTGATGATTCAATTT+TGG 0.137787 5_1:+41708642 None:intergenic
GCAATAGATGTCATCTTTAA+TGG 0.180149 5_1:+41709219 None:intergenic
GCGATAGATGTCATCTTTAA+TGG 0.184700 5_1:+41717469 None:intergenic
CACAACATTAGAACAATTAT+TGG 0.210789 5_1:+41709272 None:intergenic
GAACATACTTATCTCTTTCT+TGG 0.254516 5_1:+41719915 None:intergenic
CATCGTTTGGATTTGTTACA+TGG 0.335272 5_1:+41714825 None:intergenic
GCTTGCATGTTACCATCGTT+TGG 0.356447 5_1:+41714812 None:intergenic
GTAATCTACAAACTTCTTGT+TGG 0.390980 5_1:+41709385 None:intergenic
GTAATCTACAAACTTCTTGT+TGG 0.390980 5_1:+41717638 None:intergenic
TACTTATCTCTTTCTTGGTC+AGG 0.394970 5_1:+41719920 None:intergenic
GTCCATGTGGCATCATATCT+TGG 0.412440 5_1:+41708704 None:intergenic
AATTAGCATATTTACGAACT+TGG 0.415793 5_1:+41710060 None:intergenic
GATTTGTCCTCTGCGGTGTA+TGG 0.417041 5_1:-41714905 Msa0731250:CDS
CAATAGATGTCATCTTTAAT+GGG 0.418885 5_1:+41709220 None:intergenic
GATGTCATCTTTAATGGGTC+GGG 0.420679 5_1:+41717475 None:intergenic
CGATAGATGTCATCTTTAAT+GGG 0.421746 5_1:+41717470 None:intergenic
GATGTCATCTTTAATGGGTC+GGG 0.422699 5_1:+41709225 None:intergenic
AAATGACTAAGACGATTTGA+TGG 0.423614 5_1:+41720831 None:intergenic
TGAGCATGAAACTGATGATT+AGG 0.426108 5_1:+41708598 None:intergenic
CGAGAATGTAGGTTGGCTAC+AGG 0.457387 5_1:-41716813 Msa0731250:CDS
TTACGAACTTGGACATATGA+AGG 0.461140 5_1:+41710071 None:intergenic
TTACGAACTTGGACATATGA+AGG 0.461140 5_1:+41719173 None:intergenic
ATTACAACAACAACTTCAAA+TGG 0.471368 5_1:-41709367 Msa0731250:CDS
ATTACAACAACAACTTCAAA+TGG 0.471368 5_1:-41717620 Msa0731250:CDS
GTCACGTGTCATGCAGAGAA+AGG 0.473782 5_1:-41717407 Msa0731250:intron
CATATTCAACATGACATAGT+AGG 0.478052 5_1:-41714746 Msa0731250:CDS
TCAACTTGTGAGGCAGTGAT+TGG 0.480651 5_1:+41708670 None:intergenic
TCAACTTGTGAGGCAGTGAT+TGG 0.480651 5_1:+41714662 None:intergenic
ATCTCAGAGTTAATGTCTCC+CGG 0.500348 5_1:+41719024 None:intergenic
TCAAATGTTGTTGATCAAAG+AGG 0.501707 5_1:-41714860 Msa0731250:intron
ATCGATTATCAACATGGGTC+GGG 0.504254 5_1:-41720991 None:intergenic
TACCTGCGGTAGGGTGGCTC+AGG 0.504256 5_1:+41719775 None:intergenic
AGATGTCATCTTTAATGGGT+CGG 0.511069 5_1:+41709224 None:intergenic
CAGCTCCTATGGATCCTCTC+AGG 0.512451 5_1:-41716751 Msa0731250:intron
AGATGTCATCTTTAATGGGT+CGG 0.515620 5_1:+41717474 None:intergenic
GAATAGAGAACACAACGAAT+CGG 0.519281 5_1:-41720950 Msa0731250:CDS
TTCCTGAGCCACCCTACCGC+AGG 0.550290 5_1:-41719777 Msa0731250:intron
AATCGATTATCAACATGGGT+CGG 0.551705 5_1:-41720992 None:intergenic
CAATAATTGTTCTAATGTTG+TGG 0.557942 5_1:-41709271 Msa0731250:CDS
TACGAACTTGGACATATGAA+GGG 0.558360 5_1:+41710072 None:intergenic
TACGAACTTGGACATATGAA+GGG 0.558360 5_1:+41719174 None:intergenic
CAAAACCTGAGAGGATCCAT+AGG 0.561333 5_1:+41716746 None:intergenic
GGCATGTTCATTTGTCCATG+TGG 0.566366 5_1:+41708691 None:intergenic
GGCATGTTCATTTGTCCATG+TGG 0.566366 5_1:+41714683 None:intergenic
TATAAGAGTATACCTGCGGT+AGG 0.569331 5_1:+41719765 None:intergenic
CCAACCTACATTCTCGAAAG+TGG 0.572195 5_1:+41716820 None:intergenic
AGACATTAACTCTGAGATTG+AGG 0.572259 5_1:-41719019 Msa0731250:intron
CTGCAGGGGTATTCAGAACA+AGG 0.579109 5_1:-41719604 Msa0731250:intron
CCCACCACTTTCGAGAATGT+AGG 0.580248 5_1:-41716824 Msa0731250:CDS
TCTCTGCATGACACGTGACA+AGG 0.584435 5_1:+41717411 None:intergenic
ATGTTGTGGTGGATGAACTC+AGG 0.586007 5_1:-41709257 Msa0731250:CDS
ACCTACATTCTCGAAAGTGG+TGG 0.588015 5_1:+41716823 None:intergenic
GTAGGTTGGCTACAGGATAG+TGG 0.593145 5_1:-41716806 Msa0731250:CDS
TTTGGGTGGTTCAACTTGTG+AGG 0.605926 5_1:+41708660 None:intergenic
TTTGGGTGGTTCAACTTGTG+AGG 0.605926 5_1:+41714652 None:intergenic
AAATGGCAGAGGAACAGATA+AGG 0.606878 5_1:-41709350 Msa0731250:CDS
AAATGGCAGAGGAACAGATA+AGG 0.606878 5_1:-41717603 Msa0731250:intron
ACGATGGTAACATGCAAGCA+TGG 0.607290 5_1:-41714808 Msa0731250:CDS
AGAGTATACCTGCGGTAGGG+TGG 0.613436 5_1:+41719769 None:intergenic
ATAAGAGTATACCTGCGGTA+GGG 0.617039 5_1:+41719766 None:intergenic
GTGGCATCATATCTTGGATG+TGG 0.622348 5_1:+41708710 None:intergenic
TAATTGTTCTAATGTTGTGG+TGG 0.624825 5_1:-41709268 Msa0731250:CDS
AACATGCAAGCATGGCCACA+AGG 0.626227 5_1:-41714800 Msa0731250:CDS
CCACTTTCGAGAATGTAGGT+TGG 0.629367 5_1:-41716820 Msa0731250:CDS
ATATGATGATGTTGTTGATG+AGG 0.632888 5_1:+41714764 None:intergenic
TGTTGTGGTGGATGAACTCA+GGG 0.634359 5_1:-41709256 Msa0731250:CDS
CCTACATTCTCGAAAGTGGT+GGG 0.637121 5_1:+41716824 None:intergenic
ACAACAACTTCAAATGGCAG+AGG 0.638306 5_1:-41709361 Msa0731250:CDS
ACAACAACTTCAAATGGCAG+AGG 0.638306 5_1:-41717614 Msa0731250:CDS
GTTTAGGGATTTGTCCTCTG+CGG 0.646189 5_1:-41714912 Msa0731250:intron
ATCCAAGATATGATGCCACA+TGG 0.648499 5_1:-41708706 Msa0731250:CDS
GAGCAATATCAATATCACAA+AGG 0.664332 5_1:+41720868 None:intergenic
CATGTAACAAATCCAAACGA+TGG 0.666755 5_1:-41714824 Msa0731250:CDS
GGATATAATGTGTATCCTTG+TGG 0.684233 5_1:+41714785 None:intergenic
TGAAGAAATCAAAACCTGAG+AGG 0.684872 5_1:+41716737 None:intergenic
ATTCAAGATATGATGCCACA+TGG 0.689168 5_1:-41714698 Msa0731250:CDS
GTGGCATCATATCTTGAATG+TGG 0.716728 5_1:+41714702 None:intergenic
AAATGAACCATACACCGCAG+AGG 0.748433 5_1:+41714898 None:intergenic
CAGGGGTATTCAGAACAAGG+AGG 0.754517 5_1:-41719601 Msa0731250:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTATTTTATATT+TGG - chr5_1:41709488-41709507 Msa0731250:intron 0.0%
!!! TAATTTTCTTTCTTAAAATA+AGG - chr5_1:41709215-41709234 Msa0731250:CDS 10.0%
!! AATAATAACAATATCATTAT+GGG + chr5_1:41709587-41709606 None:intergenic 10.0%
!!! AATATTTTTGTAAATTTCAA+GGG + chr5_1:41710068-41710087 None:intergenic 10.0%
!!! AATACTTTATAATAGAATTT+TGG - chr5_1:41710451-41710470 Msa0731250:intron 10.0%
!! ACTATATAAATATAAAAAAG+AGG - chr5_1:41710667-41710686 Msa0731250:intron 10.0%
!! CTATATAAATATAAAAAAGA+GGG - chr5_1:41710668-41710687 Msa0731250:intron 10.0%
!! AAAAAAAATTAGAAAAACTT+TGG + chr5_1:41712024-41712043 None:intergenic 10.0%
!! AATTAAAATCACAAAAATTA+TGG - chr5_1:41712716-41712735 Msa0731250:intron 10.0%
!!! ATCAAATTTTTCTTATAAAT+AGG + chr5_1:41714335-41714354 None:intergenic 10.0%
!! TATGAACAAAATATTTAAAA+CGG + chr5_1:41714608-41714627 None:intergenic 10.0%
!! ATTTGATATTTATTATATGA+TGG - chr5_1:41714631-41714650 Msa0731250:intron 10.0%
!!! ATAAACTTTAAAAAAAATTG+GGG - chr5_1:41715561-41715580 Msa0731250:intron 10.0%
!! ATTTATCATTTAAAAAATGA+AGG + chr5_1:41715910-41715929 None:intergenic 10.0%
!!! ATATTTTTTATTATTAGTCT+TGG - chr5_1:41716242-41716261 Msa0731250:intron 10.0%
!! ATTATAGAAAAAGTTATTTA+AGG - chr5_1:41716895-41716914 Msa0731250:intron 10.0%
!! TTATAGAAAAAGTTATTTAA+GGG - chr5_1:41716896-41716915 Msa0731250:intron 10.0%
!! AAAGTTAATATTACAATTAT+TGG - chr5_1:41718381-41718400 Msa0731250:intron 10.0%
!!! AATAATTAAATTTCAAGTAA+TGG - chr5_1:41718615-41718634 Msa0731250:intron 10.0%
!!! ATGCAAAATTATTTTTTAAA+TGG - chr5_1:41718682-41718701 Msa0731250:intron 10.0%
!! TCTATAATAATCAATTTATT+GGG + chr5_1:41719018-41719037 None:intergenic 10.0%
!! TTCTATAATAATCAATTTAT+TGG + chr5_1:41719019-41719038 None:intergenic 10.0%
!!! AATATTTTTGTAAATTTCAA+GGG + chr5_1:41710068-41710087 None:intergenic 10.0%
!!! AAAATAAGTTTTTTTTTGAA+AGG - chr5_1:41719334-41719353 Msa0731250:intron 10.0%
!!! ATAGATTTATAATAGAATTT+TGG - chr5_1:41719548-41719567 Msa0731250:intron 10.0%
!!! TAGATTTATAATAGAATTTT+GGG - chr5_1:41719549-41719568 Msa0731250:intron 10.0%
!! TCTTATATTTATATAGTTTA+GGG + chr5_1:41719762-41719781 None:intergenic 10.0%
!! TTCTTATATTTATATAGTTT+AGG + chr5_1:41719763-41719782 None:intergenic 10.0%
!!! TTTTTCTTTATTTTTATTCT+TGG - chr5_1:41720461-41720480 Msa0731250:intron 10.0%
!!! AATATTTACTTTTGTTCTTT+TGG + chr5_1:41709170-41709189 None:intergenic 15.0%
!!! TTTTGGTAGAAATATTTTAA+TGG - chr5_1:41709422-41709441 Msa0731250:intron 15.0%
!!! TTTTTTTTTAGAGGAATATT+TGG - chr5_1:41709518-41709537 Msa0731250:intron 15.0%
!! CAATAATAACAATATCATTA+TGG + chr5_1:41709588-41709607 None:intergenic 15.0%
!!! GAATATTTTTGTAAATTTCA+AGG + chr5_1:41710069-41710088 None:intergenic 15.0%
!! TTAATAATATATAGCTTGAA+AGG + chr5_1:41710116-41710135 None:intergenic 15.0%
!!! ATTTTAAAAAAATTGAAAGG+TGG - chr5_1:41710183-41710202 Msa0731250:intron 15.0%
!!! TTTAATTCAAGTTTTTGTTT+TGG - chr5_1:41711159-41711178 Msa0731250:intron 15.0%
!!! TTAATTCAAGTTTTTGTTTT+GGG - chr5_1:41711160-41711179 Msa0731250:intron 15.0%
!!! TTTTTTATGGTGTTTATTTA+GGG - chr5_1:41711470-41711489 Msa0731250:intron 15.0%
!!! TTGATTTTATTTACATAGTT+TGG - chr5_1:41711739-41711758 Msa0731250:intron 15.0%
!!! TGATTTTATTTACATAGTTT+GGG - chr5_1:41711740-41711759 Msa0731250:intron 15.0%
!!! CATTAAATTTTCTTTTAACT+AGG - chr5_1:41711907-41711926 Msa0731250:intron 15.0%
!!! TTTTTCTTCAATTTTAATCT+TGG - chr5_1:41712208-41712227 Msa0731250:intron 15.0%
!! TAAAATTATTAAATTGTGCA+AGG + chr5_1:41712590-41712609 None:intergenic 15.0%
!!! TGCACAATTTAATAATTTTA+TGG - chr5_1:41712590-41712609 Msa0731250:intron 15.0%
!!! TTTTATGGAAATTTAATGTT+TGG - chr5_1:41712605-41712624 Msa0731250:intron 15.0%
!! TCTTTGTATTATCTATTAAT+AGG + chr5_1:41712985-41713004 None:intergenic 15.0%
!! ATTTATCATATGAAAAATCT+AGG + chr5_1:41713181-41713200 None:intergenic 15.0%
!!! AAATTAGAGTTAATCATTTT+CGG - chr5_1:41713655-41713674 Msa0731250:intron 15.0%
!!! TTCGGTATTTTTTTATTTAA+AGG - chr5_1:41713673-41713692 Msa0731250:intron 15.0%
!!! TCGGTATTTTTTTATTTAAA+GGG - chr5_1:41713674-41713693 Msa0731250:intron 15.0%
!! ACAATAAGTAAGTATTTATA+AGG + chr5_1:41714169-41714188 None:intergenic 15.0%
!!! ATAATAACTCTTTTCATATA+GGG + chr5_1:41714201-41714220 None:intergenic 15.0%
!! GTCAAATATTTCTTATAAAT+AGG - chr5_1:41714433-41714452 Msa0731250:intron 15.0%
!! CACAAAATAATTTAAGAATA+TGG + chr5_1:41715051-41715070 None:intergenic 15.0%
!!! ATGATTAAAATTCATTTTTC+TGG - chr5_1:41715533-41715552 Msa0731250:intron 15.0%
!!! TTTTGTATAAATTGATTTTG+AGG + chr5_1:41716377-41716396 None:intergenic 15.0%
!!! ATATTTTGTTGTTATATTGT+TGG + chr5_1:41716835-41716854 None:intergenic 15.0%
!! TCTATAATAAAAATTGTTGT+TGG + chr5_1:41716883-41716902 None:intergenic 15.0%
!!! TAGTTTGTTACATTTTTTAA+AGG - chr5_1:41716947-41716966 Msa0731250:intron 15.0%
!! AAAAAATAGGAAATTATTAG+TGG + chr5_1:41717229-41717248 None:intergenic 15.0%
!! AAATTTAAACAAATATTGGT+TGG + chr5_1:41717613-41717632 None:intergenic 15.0%
!! CTTCAAATTTAAACAAATAT+TGG + chr5_1:41717617-41717636 None:intergenic 15.0%
!! ACTAATTAATGCTATATATT+TGG + chr5_1:41717710-41717729 None:intergenic 15.0%
!!! TTTAATTATTTCAGTTCTTT+TGG + chr5_1:41718605-41718624 None:intergenic 15.0%
!!! AATTTGCTTTCTTAAAATAA+AGG - chr5_1:41718651-41718670 Msa0731250:intron 15.0%
!!! ACAAATAACTTCATTTTATA+TGG - chr5_1:41718857-41718876 Msa0731250:intron 15.0%
!!! GAATATTTTTGTAAATTTCA+AGG + chr5_1:41710069-41710088 None:intergenic 15.0%
!! TTAATAATATATAGCTTGAA+AGG + chr5_1:41710116-41710135 None:intergenic 15.0%
!! TATTCATATTTGTAAATGTT+AGG + chr5_1:41719401-41719420 None:intergenic 15.0%
!!! TATAAAATAAACCATTGATT+TGG - chr5_1:41719735-41719754 Msa0731250:intron 15.0%
!!! AAGAAAATTATGCTTTTTTT+TGG - chr5_1:41719778-41719797 Msa0731250:CDS 15.0%
!!! GCTGAATATTTTATATTTTA+AGG - chr5_1:41719877-41719896 Msa0731250:intron 15.0%
!!! TATTTTAAGGTATAAATTGA+CGG - chr5_1:41719890-41719909 Msa0731250:intron 15.0%
!!! TTGATTTTATTTACATAGTT+TGG - chr5_1:41711739-41711758 Msa0731250:intron 15.0%
!!! TGATTTTATTTACATAGTTT+GGG - chr5_1:41711740-41711759 Msa0731250:intron 15.0%
!! TTAATTAATATATGCAAATC+CGG - chr5_1:41720040-41720059 Msa0731250:intron 15.0%
!!! TAATATTTTTTTTTTTGTGG+TGG + chr5_1:41720080-41720099 None:intergenic 15.0%
!! AAAAAAAAATAGACAAACTT+TGG + chr5_1:41720277-41720296 None:intergenic 15.0%
!! GAAACAAATTATATATGAAG+AGG + chr5_1:41708795-41708814 None:intergenic 20.0%
!!! CATGCAATTTTTTTTTTTCA+TGG - chr5_1:41709245-41709264 Msa0731250:CDS 20.0%
!!! ATAAACTGATTTTAACCTTT+CGG - chr5_1:41709349-41709368 Msa0731250:CDS 20.0%
!!! TGGTAGAATTTCAAATATTT+TGG - chr5_1:41709405-41709424 Msa0731250:intron 20.0%
!!! TTGTTATTATTGTGATAATC+AGG - chr5_1:41709596-41709615 Msa0731250:intron 20.0%
!!! TTTTTATTCATATATCTGCA+GGG - chr5_1:41709953-41709972 Msa0731250:intron 20.0%
!! ATAAATAAACTACCAACAAT+TGG - chr5_1:41710150-41710169 Msa0731250:intron 20.0%
!!! TTTTGGATGATCAAATTAAT+AGG - chr5_1:41710468-41710487 Msa0731250:intron 20.0%
!! TTTGGATGATCAAATTAATA+GGG - chr5_1:41710469-41710488 Msa0731250:intron 20.0%
!! TAGAAGAAACATTATAGAAA+AGG + chr5_1:41710513-41710532 None:intergenic 20.0%
!! AAACATAAATCATATCAGAA+AGG + chr5_1:41710923-41710942 None:intergenic 20.0%
!!! GTTTTTTATGGTGTTTATTT+AGG - chr5_1:41711469-41711488 Msa0731250:intron 20.0%
!! ATATGTTAGTGTATAAATTG+AGG - chr5_1:41711695-41711714 Msa0731250:intron 20.0%
!! TATGTTAGTGTATAAATTGA+GGG - chr5_1:41711696-41711715 Msa0731250:intron 20.0%
!!! GATTTTATTTACATAGTTTG+GGG - chr5_1:41711741-41711760 Msa0731250:intron 20.0%
!! AAATTTAATGATCATGAGAA+AGG + chr5_1:41711897-41711916 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr5_1:41712287-41712306 None:intergenic 20.0%
!! TATAATTTCATCAACACATA+CGG + chr5_1:41712670-41712689 None:intergenic 20.0%
!! TATCAAAAATATTATGCGAA+TGG + chr5_1:41712798-41712817 None:intergenic 20.0%
!! AAAATTGCAAGAGAAATTAT+AGG + chr5_1:41712901-41712920 None:intergenic 20.0%
!! TTTGACCCAATTATTTAAAA+AGG - chr5_1:41712918-41712937 Msa0731250:intron 20.0%
!!! GAGTTCCTTTTTAAATAATT+GGG + chr5_1:41712926-41712945 None:intergenic 20.0%
!!! TGAGTTCCTTTTTAAATAAT+TGG + chr5_1:41712927-41712946 None:intergenic 20.0%
!! GAAAATGATTAACTCTAATT+TGG + chr5_1:41713656-41713675 None:intergenic 20.0%
!!! CGGTATTTTTTTATTTAAAG+GGG - chr5_1:41713675-41713694 Msa0731250:intron 20.0%
!!! TTTGATATACAATTTTCAAG+TGG + chr5_1:41713754-41713773 None:intergenic 20.0%
!!! TTTTAATGTCATGAACTATT+TGG + chr5_1:41714086-41714105 None:intergenic 20.0%
!!! CATAATAACTCTTTTCATAT+AGG + chr5_1:41714202-41714221 None:intergenic 20.0%
!!! AATTACTTGTTACATATTGA+AGG - chr5_1:41714468-41714487 Msa0731250:intron 20.0%
!! AAATTGTACGATATAAAATG+AGG + chr5_1:41714510-41714529 None:intergenic 20.0%
!!! GACACGTTAAAATAATTTTA+TGG - chr5_1:41714534-41714553 Msa0731250:intron 20.0%
!! TGATATTTATTATATGATGG+TGG - chr5_1:41714634-41714653 Msa0731250:intron 20.0%
!! CTAATATGAAAATTTATAGC+TGG + chr5_1:41715097-41715116 None:intergenic 20.0%
!!! CTATAAATTTTCATATTAGC+TGG - chr5_1:41715098-41715117 Msa0731250:intron 20.0%
!! TTCTTTGTAATTGTAATACA+AGG + chr5_1:41715177-41715196 None:intergenic 20.0%
!!! TATTTTAAGGACAAAAACTT+AGG - chr5_1:41715473-41715492 Msa0731250:intron 20.0%
!!! TTTTTGTTAGAGTTAACATA+AGG + chr5_1:41715669-41715688 None:intergenic 20.0%
!! TTAACTCTAACAAAAATCTT+AGG - chr5_1:41715673-41715692 Msa0731250:intron 20.0%
!! AGGAATTATCTTTCAAATTT+GGG + chr5_1:41715890-41715909 None:intergenic 20.0%
!! AAGGAATTATCTTTCAAATT+TGG + chr5_1:41715891-41715910 None:intergenic 20.0%
!!! CTCAAATTTTTTAGATGTAA+TGG - chr5_1:41716187-41716206 Msa0731250:intron 20.0%
!! CTCACTAAAAAATATTGAAA+CGG + chr5_1:41716530-41716549 None:intergenic 20.0%
!! CCACAATGAAAATATATAAT+GGG + chr5_1:41716591-41716610 None:intergenic 20.0%
!! TCCACAATGAAAATATATAA+TGG + chr5_1:41716592-41716611 None:intergenic 20.0%
!!! ATTAAAATGAGGGTATAATA+GGG + chr5_1:41717206-41717225 None:intergenic 20.0%
!!! TTATTAGTGGATTAAAATGA+GGG + chr5_1:41717216-41717235 None:intergenic 20.0%
!!! ATTATTAGTGGATTAAAATG+AGG + chr5_1:41717217-41717236 None:intergenic 20.0%
!!! TTAATTTTGATTAAAGGAGT+TGG + chr5_1:41717477-41717496 None:intergenic 20.0%
!! AACTCCTTTAATCAAAATTA+AGG - chr5_1:41717476-41717495 Msa0731250:CDS 20.0%
!! AATATAAGAGTAAATGACAA+AGG - chr5_1:41717740-41717759 Msa0731250:intron 20.0%
!! ATATAAGAGTAAATGACAAA+GGG - chr5_1:41717741-41717760 Msa0731250:intron 20.0%
!! AATATTTCATCTCAGTAATT+TGG + chr5_1:41718000-41718019 None:intergenic 20.0%
!! AAAATCATTAGAAAACTTCT+TGG + chr5_1:41718053-41718072 None:intergenic 20.0%
!!! TTTATGTGAAACTTTAGAAT+TGG - chr5_1:41718070-41718089 Msa0731250:intron 20.0%
!! AGAATACTAATAATTATCTG+CGG + chr5_1:41718235-41718254 None:intergenic 20.0%
!! TTGTCTGAATAAAATTAGAA+TGG - chr5_1:41718260-41718279 Msa0731250:intron 20.0%
!!! AATAACTTCATTTTATATGG+TGG - chr5_1:41718860-41718879 Msa0731250:intron 20.0%
!! TCCTACAAAAAATAAATACT+TGG - chr5_1:41719054-41719073 Msa0731250:intron 20.0%
!!! ACCAAGTATTTATTTTTTGT+AGG + chr5_1:41719058-41719077 None:intergenic 20.0%
!!! TTCTTTTTCATTTATTTGCA+GGG - chr5_1:41719103-41719122 Msa0731250:intron 20.0%
!! AATAAACTACCAACAAAAAT+TGG - chr5_1:41719304-41719323 Msa0731250:intron 20.0%
!!! ATAAGTTTTTTTTTGAAAGG+TGG - chr5_1:41719337-41719356 Msa0731250:intron 20.0%
!!! GATTTTATTTACATAGTTTG+GGG - chr5_1:41711741-41711760 Msa0731250:intron 20.0%
!!! TTTTTTCAATCTATGAAACA+TGG - chr5_1:41720488-41720507 Msa0731250:intron 20.0%
!!! AAATCGTCTTAGTCATTTTT+CGG - chr5_1:41708746-41708765 Msa0731250:intron 25.0%
! TAAACAATTGAGTTATAGTG+TGG - chr5_1:41709306-41709325 Msa0731250:CDS 25.0%
! ATCAGTTTATAACCTTCATT+TGG + chr5_1:41709339-41709358 None:intergenic 25.0%
!! CTCTGAATTTTGTATGTTTA+TGG - chr5_1:41709373-41709392 Msa0731250:CDS 25.0%
!! TATGTTTATGGACTTTTCTT+TGG - chr5_1:41709385-41709404 Msa0731250:CDS 25.0%
! GAAACTAGTATATTTGAAGA+AGG + chr5_1:41709456-41709475 None:intergenic 25.0%
!!! GGAGTCTTTTTTTTTTTTAG+AGG - chr5_1:41709509-41709528 Msa0731250:intron 25.0%
! TATAATTGATGAGCATATAC+TGG - chr5_1:41709546-41709565 Msa0731250:intron 25.0%
!! CAAATAACTTCATTTTGTGT+TGG - chr5_1:41709684-41709703 Msa0731250:intron 25.0%
!!! CATTTTGTGTTGGTTATAAA+TGG - chr5_1:41709694-41709713 Msa0731250:intron 25.0%
! TCAAAACTTCTAAACACATT+TGG - chr5_1:41709721-41709740 Msa0731250:intron 25.0%
!! ATAATATAAGAGTATACCTG+CGG + chr5_1:41709814-41709833 None:intergenic 25.0%
! ACTCTTATATTATCTTCGAT+CGG - chr5_1:41709821-41709840 Msa0731250:intron 25.0%
! ACCAATTTATTGTGAAAACA+GGG + chr5_1:41709859-41709878 None:intergenic 25.0%
! AACCAATTTATTGTGAAAAC+AGG + chr5_1:41709860-41709879 None:intergenic 25.0%
!! CTTTTTATTCATATATCTGC+AGG - chr5_1:41709952-41709971 Msa0731250:intron 25.0%
!! TTTTATTCATATATCTGCAG+GGG - chr5_1:41709954-41709973 Msa0731250:intron 25.0%
!! GTATTTTACAGTATTTTCTC+AGG - chr5_1:41710341-41710360 Msa0731250:intron 25.0%
! ATTTAGCATATTTACGAACT+TGG + chr5_1:41710413-41710432 None:intergenic 25.0%
! TAAATATAAAAAAGAGGGTG+TGG - chr5_1:41710673-41710692 Msa0731250:intron 25.0%
! AAATCATATCAGAAAGGAAA+AGG + chr5_1:41710917-41710936 None:intergenic 25.0%
!!! TTTTTGTTTTGGGCTATTTA+TGG - chr5_1:41711170-41711189 Msa0731250:intron 25.0%
! CTGAATTGTCAAATTTCTTA+AGG + chr5_1:41711642-41711661 None:intergenic 25.0%
! ATTACAACAACAACTTCAAA+TGG - chr5_1:41711952-41711971 Msa0731250:intron 25.0%
! CACAACATTAGAACAATTAT+TGG + chr5_1:41712051-41712070 None:intergenic 25.0%
! CAATAATTGTTCTAATGTTG+TGG - chr5_1:41712049-41712068 Msa0731250:intron 25.0%
! TTAATTACCTGAATACTAGA+TGG + chr5_1:41712478-41712497 None:intergenic 25.0%
! GCTGATGTTAATTTAAACAT+AGG + chr5_1:41712506-41712525 None:intergenic 25.0%
! AAAATCACAAAAATTATGGC+AGG - chr5_1:41712720-41712739 Msa0731250:intron 25.0%
! AAATCACAAAAATTATGGCA+GGG - chr5_1:41712721-41712740 Msa0731250:intron 25.0%
!! TTACACTTTTCCTAAATTGT+GGG + chr5_1:41713016-41713035 None:intergenic 25.0%
!! ACAATTTAGGAAAAGTGTAA+GGG - chr5_1:41713016-41713035 Msa0731250:intron 25.0%
!!! ATCATTTTCCTTTGTTTAAC+TGG + chr5_1:41713050-41713069 None:intergenic 25.0%
! ATCATATGAAAAATCTAGGA+GGG + chr5_1:41713177-41713196 None:intergenic 25.0%
! TATCATATGAAAAATCTAGG+AGG + chr5_1:41713178-41713197 None:intergenic 25.0%
!!! TTGAAATGATAGTGATTTTG+TGG + chr5_1:41713730-41713749 None:intergenic 25.0%
! TTATGCACAATATGATTTCA+TGG - chr5_1:41713871-41713890 Msa0731250:intron 25.0%
!! AGCTATGCAACAATTTTATA+TGG - chr5_1:41713959-41713978 Msa0731250:intron 25.0%
!! GCTATGCAACAATTTTATAT+GGG - chr5_1:41713960-41713979 Msa0731250:intron 25.0%
!! CTATGCAACAATTTTATATG+GGG - chr5_1:41713961-41713980 Msa0731250:intron 25.0%
!! ATATGGGGTAATAGTTATTT+TGG - chr5_1:41713976-41713995 Msa0731250:intron 25.0%
! ATAAGGATTGATATGACAAT+AGG + chr5_1:41714152-41714171 None:intergenic 25.0%
!! TTTTCTTATAAATAGGACCA+GGG + chr5_1:41714328-41714347 None:intergenic 25.0%
!! TTTTTCTTATAAATAGGACC+AGG + chr5_1:41714329-41714348 None:intergenic 25.0%
!!! TCTGTTGTTGATTCAATTTT+GGG + chr5_1:41714940-41714959 None:intergenic 25.0%
!!! ATCTGTTGTTGATTCAATTT+TGG + chr5_1:41714941-41714960 None:intergenic 25.0%
!! TTTATTACATGCTTTTCGTA+TGG - chr5_1:41715502-41715521 Msa0731250:intron 25.0%
! AAAATACTCACAACTATCTA+TGG + chr5_1:41715597-41715616 None:intergenic 25.0%
!! AATCTTAGGTGAATTTTCTT+AGG - chr5_1:41715687-41715706 Msa0731250:intron 25.0%
! TGCTAAAAAAGACATATGTT+TGG - chr5_1:41716325-41716344 Msa0731250:intron 25.0%
! GCTAAAAAAGACATATGTTT+GGG - chr5_1:41716326-41716345 Msa0731250:intron 25.0%
! TCAAAATGAATCAATTCTCA+TGG + chr5_1:41716409-41716428 None:intergenic 25.0%
! TCACCATAAAATAAAATGGA+GGG + chr5_1:41716559-41716578 None:intergenic 25.0%
! AAGCTCACCATAAAATAAAA+TGG + chr5_1:41716563-41716582 None:intergenic 25.0%
!! CCCATTATATATTTTCATTG+TGG - chr5_1:41716588-41716607 Msa0731250:intron 25.0%
! ATATTATGCTAACGAAAAGA+CGG - chr5_1:41716644-41716663 Msa0731250:intron 25.0%
!!! TTCTAAAACGACACTTAAAA+AGG + chr5_1:41717141-41717160 None:intergenic 25.0%
!! GATTAAAATGAGGGTATAAT+AGG + chr5_1:41717207-41717226 None:intergenic 25.0%
! TAAAGTGTGTGCAAAAAAAT+AGG + chr5_1:41717242-41717261 None:intergenic 25.0%
!!! GTAGCCTTAATTTTGATTAA+AGG + chr5_1:41717483-41717502 None:intergenic 25.0%
! ACAATATTTGAATCTCGTAA+AGG + chr5_1:41717569-41717588 None:intergenic 25.0%
! AAAAGACACTTAAAAAGGAA+CGG - chr5_1:41717832-41717851 Msa0731250:intron 25.0%
! CATATTCAACTCAAAATTTG+TGG + chr5_1:41717934-41717953 None:intergenic 25.0%
! CTTAAACTTTATCAAAACAG+TGG + chr5_1:41718023-41718042 None:intergenic 25.0%
! AAATATTCTACCGTAACAAT+TGG + chr5_1:41718523-41718542 None:intergenic 25.0%
! ACTTAAAAGCTACTATATAC+TGG - chr5_1:41718717-41718736 Msa0731250:intron 25.0%
!! TTGTTATTATTGTGATAACC+AGG - chr5_1:41718770-41718789 Msa0731250:intron 25.0%
!! ACTTAAAACATTTTCTATCC+TGG + chr5_1:41718791-41718810 None:intergenic 25.0%
! TCTAAACTTCTAAACACATT+TGG - chr5_1:41718884-41718903 Msa0731250:intron 25.0%
! TCAATTTATTGGGAAAATTG+CGG + chr5_1:41719008-41719027 None:intergenic 25.0%
!!! CTTCTTTTTCATTTATTTGC+AGG - chr5_1:41719102-41719121 Msa0731250:intron 25.0%
!!! TCTTTTTCATTTATTTGCAG+GGG - chr5_1:41719104-41719123 Msa0731250:intron 25.0%
! TGTAAATTTCAAGGGATTAA+TGG + chr5_1:41710060-41710079 None:intergenic 25.0%
!! TTTTATGCTCCAATTTTTGT+TGG + chr5_1:41719316-41719335 None:intergenic 25.0%
! AATTAGCATATTTACGAACT+TGG + chr5_1:41719515-41719534 None:intergenic 25.0%
! TTTATGCTATTAAGATGTGA+TGG - chr5_1:41719851-41719870 Msa0731250:intron 25.0%
!!! ATTTTTTTTTTTGTGGTGGT+AGG + chr5_1:41720076-41720095 None:intergenic 25.0%
! AATTGAATGATCATGAGAAA+GGG + chr5_1:41720148-41720167 None:intergenic 25.0%
! AAATTGAATGATCATGAGAA+AGG + chr5_1:41720149-41720168 None:intergenic 25.0%
!! ATTCAATTTTCTTCTTGACT+AGG - chr5_1:41720160-41720179 Msa0731250:intron 25.0%
! ATTACAACAACAACTTCAAA+TGG - chr5_1:41711952-41711971 Msa0731250:intron 25.0%
! CACAACATTAGAACAATTAT+TGG + chr5_1:41712051-41712070 None:intergenic 25.0%
! CAATAATTGTTCTAATGTTG+TGG - chr5_1:41712049-41712068 Msa0731250:intron 25.0%
! CAATAGATGTCATCTTTAAT+GGG + chr5_1:41720355-41720374 None:intergenic 25.0%
!!! TATATGTGTCGATTATATGT+CGG - chr5_1:41720584-41720603 Msa0731250:intron 25.0%
! ACATGCATATTATTTACTCA+TGG - chr5_1:41720695-41720714 Msa0731250:intron 25.0%
! TTAATTACCTGAATACTAGA+TGG + chr5_1:41712478-41712497 None:intergenic 25.0%
!!! TCTGTTGATGATTCAATTTT+GGG + chr5_1:41720932-41720951 None:intergenic 25.0%
!!! ATCTGTTGATGATTCAATTT+TGG + chr5_1:41720933-41720952 None:intergenic 25.0%
GAGCAATATCAATATCACAA+AGG + chr5_1:41708707-41708726 None:intergenic 30.0%
AAATGACTAAGACGATTTGA+TGG + chr5_1:41708744-41708763 None:intergenic 30.0%
!!! AATCGTCTTAGTCATTTTTC+GGG - chr5_1:41708747-41708766 Msa0731250:intron 30.0%
! TTTCTTGTGCAAATTTTGTG+TGG - chr5_1:41708811-41708830 Msa0731250:intron 30.0%
! GTAATAATTTGTGACTCGTA+AGG - chr5_1:41708990-41709009 Msa0731250:intron 30.0%
!!! TGTGTTCTTTTTTGTCCTAT+GGG - chr5_1:41709050-41709069 Msa0731250:intron 30.0%
! TAATTTTCAAAAGCCAGCAA+TGG + chr5_1:41709120-41709139 None:intergenic 30.0%
GAACATACTTATCTCTTTCT+TGG + chr5_1:41709660-41709679 None:intergenic 30.0%
!! TTTGTGTTGGTTATAAATGG+TGG - chr5_1:41709697-41709716 Msa0731250:intron 30.0%
! TCCCTGTTTTCACAATAAAT+TGG - chr5_1:41709855-41709874 Msa0731250:intron 30.0%
AATATTTGATAGAGCTAGCT+TGG + chr5_1:41710091-41710110 None:intergenic 30.0%
!!! ATTTTTTCTGCTCCAATTGT+TGG + chr5_1:41710165-41710184 None:intergenic 30.0%
ATAAAAATTGCAGTATGCCA+TGG + chr5_1:41710592-41710611 None:intergenic 30.0%
! TATAGAGTAAACCATCGATT+TGG - chr5_1:41710637-41710656 Msa0731250:intron 30.0%
! TGGTTGATGTTATTTAGGTA+GGG - chr5_1:41710763-41710782 Msa0731250:intron 30.0%
AAGACAATCAACATGATGTA+AGG + chr5_1:41710952-41710971 None:intergenic 30.0%
!! AGTTGTATGAGTATTGGATT+AGG - chr5_1:41711230-41711249 Msa0731250:intron 30.0%
!!! GATTAGGACTTTTTTGAATG+TGG - chr5_1:41711246-41711265 Msa0731250:intron 30.0%
!! GGTTATGAATTCGTTTTTAG+TGG - chr5_1:41711343-41711362 Msa0731250:intron 30.0%
AATCAGAGACTATAAACTAC+AGG + chr5_1:41711516-41711535 None:intergenic 30.0%
!! GCTTTAAGACGAACATAAAT+CGG + chr5_1:41711541-41711560 None:intergenic 30.0%
ATTTATGTTCGTCTTAAAGC+AGG - chr5_1:41711541-41711560 Msa0731250:intron 30.0%
TTTATGTTCGTCTTAAAGCA+GGG - chr5_1:41711542-41711561 Msa0731250:intron 30.0%
AGTTTATGCCATTAAGACTT+AGG - chr5_1:41711660-41711679 Msa0731250:intron 30.0%
GTTTATGCCATTAAGACTTA+GGG - chr5_1:41711661-41711680 Msa0731250:intron 30.0%
TTTGGGGATTAAATTGAAGA+GGG - chr5_1:41711757-41711776 Msa0731250:intron 30.0%
GTAATCTACAAACTTCTTGT+TGG + chr5_1:41711937-41711956 None:intergenic 30.0%
TAATTGTTCTAATGTTGTGG+TGG - chr5_1:41712052-41712071 Msa0731250:intron 30.0%
CGATAGATGTCATCTTTAAT+GGG + chr5_1:41712105-41712124 None:intergenic 30.0%
!!! TTCTACTACGTTTTTTTCAC+TGG + chr5_1:41712140-41712159 None:intergenic 30.0%
AACATATGTTGCAACTTTCT+TGG - chr5_1:41712374-41712393 Msa0731250:intron 30.0%
! TTTGTACAAAAGAGTACAAG+AGG - chr5_1:41712541-41712560 Msa0731250:intron 30.0%
ATAGGTATATATGAGACAGA+AGG + chr5_1:41712883-41712902 None:intergenic 30.0%
GAATACTTAACCCACAATTT+AGG - chr5_1:41713003-41713022 Msa0731250:intron 30.0%
! CTTACACTTTTCCTAAATTG+TGG + chr5_1:41713017-41713036 None:intergenic 30.0%
! CACAATTTAGGAAAAGTGTA+AGG - chr5_1:41713015-41713034 Msa0731250:intron 30.0%
! CAATTTAGGAAAAGTGTAAG+GGG - chr5_1:41713017-41713036 Msa0731250:intron 30.0%
GTATTCAACCAGTTAAACAA+AGG - chr5_1:41713039-41713058 Msa0731250:intron 30.0%
TCATATGAAAAATCTAGGAG+GGG + chr5_1:41713176-41713195 None:intergenic 30.0%
AGTTATATGGTTAATCACCA+CGG + chr5_1:41713225-41713244 None:intergenic 30.0%
ATACACATGCAGAAGTTATA+TGG + chr5_1:41713238-41713257 None:intergenic 30.0%
GGATTATCTCAGTATTTCTT+TGG - chr5_1:41713273-41713292 Msa0731250:intron 30.0%
!!! TGTTTTTTAGCAGAAAAACG+GGG + chr5_1:41713525-41713544 None:intergenic 30.0%
!!! GTGTTTTTTAGCAGAAAAAC+GGG + chr5_1:41713526-41713545 None:intergenic 30.0%
!!! GGTGTTTTTTAGCAGAAAAA+CGG + chr5_1:41713527-41713546 None:intergenic 30.0%
CACAACAACTTAGAAGATTT+GGG + chr5_1:41713631-41713650 None:intergenic 30.0%
ACACAACAACTTAGAAGATT+TGG + chr5_1:41713632-41713651 None:intergenic 30.0%
TGTGCATAAATATATGCGTT+TGG + chr5_1:41713860-41713879 None:intergenic 30.0%
CATAGCTTGAAATTGAATGA+TGG + chr5_1:41713946-41713965 None:intergenic 30.0%
TTTCTTATAAATAGGACCAG+GGG + chr5_1:41714441-41714460 None:intergenic 30.0%
TTTCTTATAAATAGGACCAG+AGG - chr5_1:41714441-41714460 Msa0731250:intron 30.0%
TTCTTATAAATAGGACCAGA+GGG - chr5_1:41714442-41714461 Msa0731250:intron 30.0%
AAATGAGGTAATAGTCACTT+TGG + chr5_1:41714495-41714514 None:intergenic 30.0%
!! TATATGATGGTGGTATGTTT+AGG - chr5_1:41714644-41714663 Msa0731250:intron 30.0%
!! ATATGATGGTGGTATGTTTA+GGG - chr5_1:41714645-41714664 Msa0731250:intron 30.0%
TCAAATGTTGTTGATCAAAG+AGG - chr5_1:41714712-41714731 Msa0731250:CDS 30.0%
! ATATGATGATGTTGTTGATG+AGG + chr5_1:41714811-41714830 None:intergenic 30.0%
CATATTCAACATGACATAGT+AGG - chr5_1:41714826-41714845 Msa0731250:CDS 30.0%
TAATTGTAATACAAGGACGA+TGG + chr5_1:41715170-41715189 None:intergenic 30.0%
TAGTCTGAAAGATACAGAAA+TGG - chr5_1:41715210-41715229 Msa0731250:intron 30.0%
TCAAAATGATTGTGAGTGTT+TGG + chr5_1:41715361-41715380 None:intergenic 30.0%
AAAGTTCATGAAATGTTGCA+AGG - chr5_1:41716215-41716234 Msa0731250:intron 30.0%
!! TATTAGTCTTGGATGATGTA+TGG - chr5_1:41716253-41716272 Msa0731250:intron 30.0%
TGATGTATGGAAAAGAAACT+AGG - chr5_1:41716266-41716285 Msa0731250:intron 30.0%
!!! GTCTGCAAATTAGTTTTTCA+CGG - chr5_1:41716502-41716521 Msa0731250:intron 30.0%
!!! CTACCCTCCATTTTATTTTA+TGG - chr5_1:41716553-41716572 Msa0731250:intron 30.0%
CTCACCATAAAATAAAATGG+AGG + chr5_1:41716560-41716579 None:intergenic 30.0%
! TGGATTTCTACACATTTTCA+TGG - chr5_1:41716608-41716627 Msa0731250:intron 30.0%
TAATAAAAAGAGCGGAAAGA+TGG + chr5_1:41716682-41716701 None:intergenic 30.0%
AAACGACACTTAAAAAGGAA+CGG + chr5_1:41717136-41717155 None:intergenic 30.0%
!! GCTTTTGATTAATGTGAAGT+TGG + chr5_1:41717431-41717450 None:intergenic 30.0%
!!! ATTTTGATTAAAGGAGTTGG+AGG + chr5_1:41717474-41717493 None:intergenic 30.0%
ACACAGTGTGAATTTAACAT+TGG + chr5_1:41717520-41717539 None:intergenic 30.0%
!!! CTGTCGTTTTCGTATTTTAA+GGG + chr5_1:41717785-41717804 None:intergenic 30.0%
!!! ACTGTCGTTTTCGTATTTTA+AGG + chr5_1:41717786-41717805 None:intergenic 30.0%
CGCTAAAAAGACACTTAAAA+AGG - chr5_1:41717827-41717846 Msa0731250:intron 30.0%
TAAGATGCATTTCTCTAATC+TGG - chr5_1:41717887-41717906 Msa0731250:intron 30.0%
AAGATGCATTTCTCTAATCT+GGG - chr5_1:41717888-41717907 Msa0731250:intron 30.0%
!! TGAAACTTTAGAATTGGTGA+TGG - chr5_1:41718076-41718095 Msa0731250:intron 30.0%
TGTATCAAAACTTTCGTCTA+TGG - chr5_1:41718120-41718139 Msa0731250:intron 30.0%
TAAACACTTAAGAAGAGAAG+AGG + chr5_1:41718308-41718327 None:intergenic 30.0%
!!! TGTTCTTGTTTTTTGTCCTA+TGG - chr5_1:41718484-41718503 Msa0731250:intron 30.0%
!!! GTTCTTGTTTTTTGTCCTAT+GGG - chr5_1:41718485-41718504 Msa0731250:intron 30.0%
ATTTCTCTTGAAATCATTGC+TGG - chr5_1:41718539-41718558 Msa0731250:intron 30.0%
CTGGTCATTATGTATACTAA+TGG - chr5_1:41718736-41718755 Msa0731250:intron 30.0%
GAACATACTTATCTCTTTCT+TGG + chr5_1:41709660-41709679 None:intergenic 30.0%
TATATTTGATAGAGCTAGCT+TGG + chr5_1:41719240-41719259 None:intergenic 30.0%
! GCATTTTACAGTATTTTCTC+AGG - chr5_1:41719443-41719462 Msa0731250:intron 30.0%
ATAAAAATTGCAGTATGCCA+TGG + chr5_1:41710592-41710611 None:intergenic 30.0%
ATTGAATGATCATGAGAAAG+GGG + chr5_1:41720147-41720166 None:intergenic 30.0%
GTAATCTACAAACTTCTTGT+TGG + chr5_1:41711937-41711956 None:intergenic 30.0%
TAATTGTTCTAATGTTGTGG+TGG - chr5_1:41712052-41712071 Msa0731250:intron 30.0%
GCAATAGATGTCATCTTTAA+TGG + chr5_1:41720356-41720375 None:intergenic 30.0%
!!! TTCTACTACGTTTTTTTCAC+TGG + chr5_1:41712140-41712159 None:intergenic 30.0%
CATGAAACATGGATATTCTT+TGG + chr5_1:41720646-41720665 None:intergenic 30.0%
AGAAAATTGCACATGAAACA+TGG + chr5_1:41720657-41720676 None:intergenic 30.0%
! TGTTTCATGTGCAATTTTCT+TGG - chr5_1:41720657-41720676 Msa0731250:intron 30.0%
ATTATTTACTCATGGTTGCA+TGG - chr5_1:41720703-41720722 Msa0731250:intron 30.0%
ATGGATCATATGAAGATAGT+TGG + chr5_1:41720752-41720771 None:intergenic 30.0%
ATATGATCCATCTAGTATTC+AGG - chr5_1:41720761-41720780 Msa0731250:intron 30.0%
CATATTCAACATGACATAGT+AGG - chr5_1:41714826-41714845 Msa0731250:CDS 30.0%
GAATAGAGAACACAACGAAT+CGG - chr5_1:41708622-41708641 Msa0731250:CDS 35.0%
! ACGTTTTCAAAGCGTAGAAA+TGG - chr5_1:41708651-41708670 Msa0731250:CDS 35.0%
!!! ATCGTCTTAGTCATTTTTCG+GGG - chr5_1:41708748-41708767 Msa0731250:intron 35.0%
TATGCCTCTTCTCTTCTTAA+TGG - chr5_1:41708868-41708887 Msa0731250:intron 35.0%
TCAACCATTAAGAAGAGAAG+AGG + chr5_1:41708875-41708894 None:intergenic 35.0%
!!! GTGTGTTCTTTTTTGTCCTA+TGG - chr5_1:41709049-41709068 Msa0731250:intron 35.0%
!!! TCTTTTTTGTCCTATGGGTT+AGG - chr5_1:41709055-41709074 Msa0731250:intron 35.0%
AAATATTCCACCGTAACAAC+TGG + chr5_1:41709088-41709107 None:intergenic 35.0%
TACAAAATTCAGAGTCCGAA+AGG + chr5_1:41709367-41709386 None:intergenic 35.0%
TACTTATCTCTTTCTTGGTC+AGG + chr5_1:41709655-41709674 None:intergenic 35.0%
TGTGAAAACAGGGAAAACAA+AGG + chr5_1:41709849-41709868 None:intergenic 35.0%
TACGAACTTGGACATATGAA+GGG + chr5_1:41710401-41710420 None:intergenic 35.0%
TTACGAACTTGGACATATGA+AGG + chr5_1:41710402-41710421 None:intergenic 35.0%
!! AGACATTAACTCTGAGATTG+AGG - chr5_1:41710553-41710572 Msa0731250:intron 35.0%
! GTGGTTGATGTTATTTAGGT+AGG - chr5_1:41710762-41710781 Msa0731250:intron 35.0%
ACAATCAACATGATGTAAGG+TGG + chr5_1:41710949-41710968 None:intergenic 35.0%
TTGTCTTCATGTTTGTGTCT+TGG - chr5_1:41710965-41710984 Msa0731250:intron 35.0%
GATCTCGAAGCAAAATTAAC+CGG + chr5_1:41711002-41711021 None:intergenic 35.0%
ACTCCATAACCAAATCAACA+AGG + chr5_1:41711099-41711118 None:intergenic 35.0%
ATTTGGTTATGGAGTCTAGT+GGG - chr5_1:41711104-41711123 Msa0731250:intron 35.0%
GATATCGAATCAAAAGCGAT+CGG + chr5_1:41711130-41711149 None:intergenic 35.0%
!! GATCGCTTTTGATTCGATAT+CGG - chr5_1:41711129-41711148 Msa0731250:intron 35.0%
! ATGGTGTTCTTTTGATGAAC+CGG - chr5_1:41711189-41711208 Msa0731250:intron 35.0%
!!! GGAGGATGTTTTGACTTTTA+CGG - chr5_1:41711288-41711307 Msa0731250:intron 35.0%
!!! GAGGATGTTTTGACTTTTAC+GGG - chr5_1:41711289-41711308 Msa0731250:intron 35.0%
!!! ACTTTTACGGGTGTTGTTTT+GGG - chr5_1:41711301-41711320 Msa0731250:intron 35.0%
! TTTACGACAGAGTCTGATTT+TGG - chr5_1:41711369-41711388 Msa0731250:intron 35.0%
!! ATTGAAACCAGGGCTTTATT+AGG - chr5_1:41711430-41711449 Msa0731250:intron 35.0%
!!! GGGTGTATGAGTGTTTTTTA+TGG - chr5_1:41711457-41711476 Msa0731250:intron 35.0%
TATTCAGCCCTAAGTCTTAA+TGG + chr5_1:41711671-41711690 None:intergenic 35.0%
GTTTGGGGATTAAATTGAAG+AGG - chr5_1:41711756-41711775 Msa0731250:intron 35.0%
! AGATGTCATCTTTAATGGGT+CGG + chr5_1:41712101-41712120 None:intergenic 35.0%
GCGATAGATGTCATCTTTAA+TGG + chr5_1:41712106-41712125 None:intergenic 35.0%
TCTTCGCAATCTATGAAGTA+TGG - chr5_1:41712238-41712257 Msa0731250:intron 35.0%
ATGGATCATACGAAGATAGT+TGG + chr5_1:41712459-41712478 None:intergenic 35.0%
GTATGATCCATCTAGTATTC+AGG - chr5_1:41712468-41712487 Msa0731250:intron 35.0%
! TTTTGATACATCAGCTCCTA+TGG - chr5_1:41712810-41712829 Msa0731250:intron 35.0%
TGAAGAAATCAAAACCTGAG+AGG + chr5_1:41712838-41712857 None:intergenic 35.0%
! GGGGTGACATTTAACATTTT+GGG + chr5_1:41713157-41713176 None:intergenic 35.0%
! AGGGGTGACATTTAACATTT+TGG + chr5_1:41713158-41713177 None:intergenic 35.0%
! TAAAACATCTTTTCATGCCG+TGG - chr5_1:41713205-41713224 Msa0731250:intron 35.0%
GTGTATTATAACTGAGACAG+TGG - chr5_1:41713252-41713271 Msa0731250:intron 35.0%
ATGTCGAAGAGATTGTTGAT+AGG + chr5_1:41713569-41713588 None:intergenic 35.0%
CTTAGAAGATTTGGGAAGTT+AGG + chr5_1:41713623-41713642 None:intergenic 35.0%
TCGAAATGTGTATTGTGTCT+GGG + chr5_1:41713826-41713845 None:intergenic 35.0%
AAATATATGCGTTTGGAGGA+GGG + chr5_1:41713853-41713872 None:intergenic 35.0%
TAAATATATGCGTTTGGAGG+AGG + chr5_1:41713854-41713873 None:intergenic 35.0%
GCATAAATATATGCGTTTGG+AGG + chr5_1:41713857-41713876 None:intergenic 35.0%
TTCTTATAAATAGGACCAGG+GGG + chr5_1:41714326-41714345 None:intergenic 35.0%
TAACAAGTAATTACTCCCTC+TGG + chr5_1:41714460-41714479 None:intergenic 35.0%
! GTGTATGGTTCATTTTCACA+AGG - chr5_1:41714682-41714701 Msa0731250:CDS 35.0%
! GTTGTTGATCAAAGAGGTAT+AGG - chr5_1:41714718-41714737 Msa0731250:CDS 35.0%
!! CATCGTTTGGATTTGTTACA+TGG + chr5_1:41714750-41714769 None:intergenic 35.0%
CATGTAACAAATCCAAACGA+TGG - chr5_1:41714748-41714767 Msa0731250:CDS 35.0%
GGATATAATGTGTATCCTTG+TGG + chr5_1:41714790-41714809 None:intergenic 35.0%
ATTCAAGATATGATGCCACA+TGG - chr5_1:41714874-41714893 Msa0731250:CDS 35.0%
!!! GTTGTTGATTCAATTTTGGG+TGG + chr5_1:41714937-41714956 None:intergenic 35.0%
AATAAGTGTAGAATCGAGCT+TGG - chr5_1:41715281-41715300 Msa0731250:intron 35.0%
! ATTTTATGTGATGTACCACG+CGG - chr5_1:41715612-41715631 Msa0731250:intron 35.0%
TTTCTTAAATGTTATCCGCG+TGG + chr5_1:41715630-41715649 None:intergenic 35.0%
AAAGGAAGTAAGGATAGACA+TGG + chr5_1:41716465-41716484 None:intergenic 35.0%
CAGAAAAGGAAAAGGAAGTA+AGG + chr5_1:41716475-41716494 None:intergenic 35.0%
CTCACTATCAGAAAAGGAAA+AGG + chr5_1:41716483-41716502 None:intergenic 35.0%
CGTTAGCGTAATAAAAAGAG+CGG + chr5_1:41716690-41716709 None:intergenic 35.0%
CGCGCAAAAAAAAAATTCGT+TGG + chr5_1:41717319-41717338 None:intergenic 35.0%
CAAAATTAAGGCTACAACCA+TGG - chr5_1:41717488-41717507 Msa0731250:CDS 35.0%
! TTTAACATTGGTTGAAGCCA+TGG + chr5_1:41717508-41717527 None:intergenic 35.0%
!! TTGTTTTGTCTCTGTGAAGT+TGG - chr5_1:41717863-41717882 Msa0731250:intron 35.0%
TCATCTCAGTAATTTGGCAA+AGG + chr5_1:41717994-41718013 None:intergenic 35.0%
! TGCCTTCTATTGTTAACTTG+AGG - chr5_1:41718173-41718192 Msa0731250:intron 35.0%
AGCCTCAAGTTAACAATAGA+AGG + chr5_1:41718178-41718197 None:intergenic 35.0%
TACTAATAATTATCTGCGGC+TGG + chr5_1:41718231-41718250 None:intergenic 35.0%
! GCTTTAGATGCACTAATTTG+TGG - chr5_1:41718413-41718432 Msa0731250:intron 35.0%
!!! TGTTTTTTGTCCTATGGGTT+AGG - chr5_1:41718490-41718509 Msa0731250:intron 35.0%
AGGATCTTGACCAATTGTTA+CGG - chr5_1:41718510-41718529 Msa0731250:intron 35.0%
TACTTATCTCTTTCTTGGTC+AGG + chr5_1:41709655-41709674 None:intergenic 35.0%
TACGAACTTGGACATATGAA+GGG + chr5_1:41710401-41710420 None:intergenic 35.0%
TTACGAACTTGGACATATGA+AGG + chr5_1:41710402-41710421 None:intergenic 35.0%
TAGTTTAGGGACCAAATCAA+TGG + chr5_1:41719749-41719768 None:intergenic 35.0%
TTGAATGATCATGAGAAAGG+GGG + chr5_1:41720146-41720165 None:intergenic 35.0%
! AGATGTCATCTTTAATGGGT+CGG + chr5_1:41712101-41712120 None:intergenic 35.0%
!!! GTTGATGATTCAATTTTGGG+TGG + chr5_1:41720929-41720948 None:intergenic 35.0%
TGAGCATGAAACTGATGATT+AGG + chr5_1:41720977-41720996 None:intergenic 35.0%
!!! GTCATTTTTCGGGGAAAAGA+AGG - chr5_1:41708757-41708776 Msa0731250:intron 40.0%
AGGATCTTGACCAGTTGTTA+CGG - chr5_1:41709075-41709094 Msa0731250:intron 40.0%
ATTTCCCTTGAAACCATTGC+TGG - chr5_1:41709104-41709123 Msa0731250:intron 40.0%
AAAGCCAGCAATGGTTTCAA+GGG + chr5_1:41709111-41709130 None:intergenic 40.0%
AAAAGCCAGCAATGGTTTCA+AGG + chr5_1:41709112-41709131 None:intergenic 40.0%
! TGTGGTGTTAGTCCAAATGA+AGG - chr5_1:41709324-41709343 Msa0731250:CDS 40.0%
! ATAAGAGTATACCTGCGGTA+GGG + chr5_1:41709809-41709828 None:intergenic 40.0%
! TATAAGAGTATACCTGCGGT+AGG + chr5_1:41709810-41709829 None:intergenic 40.0%
TCTACTGCTTCAATGAAGTC+CGG - chr5_1:41710529-41710548 Msa0731250:intron 40.0%
ATCTCAGAGTTAATGTCTCC+CGG + chr5_1:41710551-41710570 None:intergenic 40.0%
TAGTTTAGGGACCAAATCGA+TGG + chr5_1:41710651-41710670 None:intergenic 40.0%
! TAAAAAAGAGGGTGTGGTTG+TGG - chr5_1:41710679-41710698 Msa0731250:intron 40.0%
TGGACGAGAGCTAATTAAGA+GGG - chr5_1:41710738-41710757 Msa0731250:intron 40.0%
! ATGTTATTTAGGTAGGGAGC+TGG - chr5_1:41710769-41710788 Msa0731250:intron 40.0%
AAAGGAAAAGGCTCAACTCA+AGG + chr5_1:41710905-41710924 None:intergenic 40.0%
CATGTTTGTGTCTTGGATTC+TGG - chr5_1:41710972-41710991 Msa0731250:intron 40.0%
TTTGCTTCGAGATCGAAAGT+TGG - chr5_1:41711008-41711027 Msa0731250:intron 40.0%
!! AGGTATGGTGTCTTGTTTGA+TGG - chr5_1:41711056-41711075 Msa0731250:intron 40.0%
!! TGTCTTGTTTGATGGATCGA+GGG - chr5_1:41711064-41711083 Msa0731250:intron 40.0%
!! GTGCCTTGTTGATTTGGTTA+TGG - chr5_1:41711093-41711112 Msa0731250:intron 40.0%
! GATTTGGTTATGGAGTCTAG+TGG - chr5_1:41711103-41711122 Msa0731250:intron 40.0%
! TGTTCTTTTGATGAACCGGA+GGG - chr5_1:41711193-41711212 Msa0731250:intron 40.0%
!!! GACTTTTACGGGTGTTGTTT+TGG - chr5_1:41711300-41711319 Msa0731250:intron 40.0%
!!! CTTTTACGGGTGTTGTTTTG+GGG - chr5_1:41711302-41711321 Msa0731250:intron 40.0%
! TTTGGGGTGAGTAATGACAA+TGG - chr5_1:41711318-41711337 Msa0731250:intron 40.0%
TTGGGGTGAGTAATGACAAT+GGG - chr5_1:41711319-41711338 Msa0731250:intron 40.0%
TTCGTCTTAAAGCAGGGATA+TGG - chr5_1:41711548-41711567 Msa0731250:intron 40.0%
ACAACAACTTCAAATGGCAG+AGG - chr5_1:41711958-41711977 Msa0731250:intron 40.0%
AAATGGCAGAGGAACAGATA+AGG - chr5_1:41711969-41711988 Msa0731250:intron 40.0%
!! TTGTGGTGGATATGAACTCA+GGG - chr5_1:41712066-41712085 Msa0731250:intron 40.0%
! GATGTCATCTTTAATGGGTC+GGG + chr5_1:41712100-41712119 None:intergenic 40.0%
TGCTAAAAAACACCTCGAAG+TGG - chr5_1:41713533-41713552 Msa0731250:intron 40.0%
CGAAATGTGTATTGTGTCTG+GGG + chr5_1:41713825-41713844 None:intergenic 40.0%
GTCGAAATGTGTATTGTGTC+TGG + chr5_1:41713827-41713846 None:intergenic 40.0%
GTGGCATCATATCTTGAATG+TGG + chr5_1:41714873-41714892 None:intergenic 40.0%
TGAGCATGAAGCTGATGATT+AGG + chr5_1:41714985-41715004 None:intergenic 40.0%
TCAATATCCAGCGCAATGAA+AGG - chr5_1:41716130-41716149 Msa0731250:intron 40.0%
! ACTTTTACCTTTCATTGCGC+TGG + chr5_1:41716140-41716159 None:intergenic 40.0%
TGCAGACTCACTATCAGAAA+AGG + chr5_1:41716489-41716508 None:intergenic 40.0%
CGTTAGCGCAATAAAAAGAG+CGG + chr5_1:41717095-41717114 None:intergenic 40.0%
GACACTTAAAAAGGAACGGA+GGG + chr5_1:41717836-41717855 None:intergenic 40.0%
AGACACTTAAAAAGGAACGG+AGG - chr5_1:41717835-41717854 Msa0731250:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG - chr5_1:41717836-41717855 Msa0731250:intron 40.0%
AATTTGGCAAAGGAGGTAGA+TGG + chr5_1:41717984-41718003 None:intergenic 40.0%
TCTCAGTAATTTGGCAAAGG+AGG + chr5_1:41717991-41718010 None:intergenic 40.0%
CAATAGAAGGCAATCACGTT+TGG + chr5_1:41718165-41718184 None:intergenic 40.0%
AATAATTATCTGCGGCTGGA+GGG + chr5_1:41718227-41718246 None:intergenic 40.0%
TAATAATTATCTGCGGCTGG+AGG + chr5_1:41718228-41718247 None:intergenic 40.0%
! CATTTTCACTTCTCAACTGC+TGG + chr5_1:41710372-41710391 None:intergenic 40.0%
!! AGACATCAACTCTGAGATTG+AGG - chr5_1:41719652-41719671 Msa0731250:intron 40.0%
ACAACAACTTCAAATGGCAG+AGG - chr5_1:41711958-41711977 Msa0731250:intron 40.0%
AAATGGCAGAGGAACAGATA+AGG - chr5_1:41711969-41711988 Msa0731250:intron 40.0%
! GATGTCATCTTTAATGGGTC+GGG + chr5_1:41712100-41712119 None:intergenic 40.0%
ATCCAAGATATGATGCCACA+TGG - chr5_1:41720866-41720885 Msa0731250:CDS 40.0%
TGGTCAAGATCCTAACCCAT+AGG + chr5_1:41709068-41709087 None:intergenic 45.0%
ATCTTGACCAGTTGTTACGG+TGG - chr5_1:41709078-41709097 Msa0731250:intron 45.0%
CTACTGCTTCAATGAAGTCC+GGG - chr5_1:41710530-41710549 Msa0731250:intron 45.0%
GAGGTAAGAACATGTCACCA+TGG - chr5_1:41710572-41710591 Msa0731250:intron 45.0%
GTGGACGAGAGCTAATTAAG+AGG - chr5_1:41710737-41710756 Msa0731250:intron 45.0%
GGACGAGAGCTAATTAAGAG+GGG - chr5_1:41710739-41710758 Msa0731250:intron 45.0%
GACGAGAGCTAATTAAGAGG+GGG - chr5_1:41710740-41710759 Msa0731250:intron 45.0%
! GGGGGTGGTTGATGTTATTT+AGG - chr5_1:41710758-41710777 Msa0731250:intron 45.0%
! GCTCTTGGTGTATCCATTGT+AGG - chr5_1:41710808-41710827 Msa0731250:intron 45.0%
GATGAACCCAAAAACAGAGG+CGG + chr5_1:41710834-41710853 None:intergenic 45.0%
GCAGATGAACCCAAAAACAG+AGG + chr5_1:41710837-41710856 None:intergenic 45.0%
! GCTAGCCCTTGTTGAGTTTT+GGG - chr5_1:41710861-41710880 Msa0731250:intron 45.0%
! CTAGCCCTTGTTGAGTTTTG+GGG - chr5_1:41710862-41710881 Msa0731250:intron 45.0%
!! TAGCCCTTGTTGAGTTTTGG+GGG - chr5_1:41710863-41710882 Msa0731250:intron 45.0%
TGTCTAGTTGCAACCTTGTC+TGG - chr5_1:41711031-41711050 Msa0731250:intron 45.0%
!! GTGTCTTGTTTGATGGATCG+AGG - chr5_1:41711063-41711082 Msa0731250:intron 45.0%
! GTGTTCTTTTGATGAACCGG+AGG - chr5_1:41711192-41711211 Msa0731250:intron 45.0%
GGCGGAAGTTGTATGAGTAT+TGG - chr5_1:41711224-41711243 Msa0731250:intron 45.0%
! ACGACAGAGTCTGATTTTGG+TGG - chr5_1:41711372-41711391 Msa0731250:intron 45.0%
!!! AGAGTCTGATTTTGGTGGTG+CGG - chr5_1:41711377-41711396 Msa0731250:intron 45.0%
!!! TTTGGTGGTGCGGTTTCTTT+TGG - chr5_1:41711387-41711406 Msa0731250:intron 45.0%
! TTTGGTGGTTGTTGTCCTCA+TGG - chr5_1:41711405-41711424 Msa0731250:intron 45.0%
! TTGGTGGTTGTTGTCCTCAT+GGG - chr5_1:41711406-41711425 Msa0731250:intron 45.0%
!! TCCTCATGGGTATTGAAACC+AGG - chr5_1:41711419-41711438 Msa0731250:intron 45.0%
!! CCTCATGGGTATTGAAACCA+GGG - chr5_1:41711420-41711439 Msa0731250:intron 45.0%
!! ACCAGGGCTTTATTAGGTGT+TGG - chr5_1:41711436-41711455 Msa0731250:intron 45.0%
!! CCAGGGCTTTATTAGGTGTT+GGG - chr5_1:41711437-41711456 Msa0731250:intron 45.0%
TAGGGTCTTCTGCCCATATA+CGG - chr5_1:41711488-41711507 Msa0731250:intron 45.0%
! AAACTACAGGCGCCGTATAT+GGG + chr5_1:41711503-41711522 None:intergenic 45.0%
! TAAACTACAGGCGCCGTATA+TGG + chr5_1:41711504-41711523 None:intergenic 45.0%
!! GTTGTGGTGGATATGAACTC+AGG - chr5_1:41712065-41712084 Msa0731250:intron 45.0%
!! TTAGCGGTATTGACGTGTCA+AGG + chr5_1:41712271-41712290 None:intergenic 45.0%
GCATGTGTACTCATGATTGC+AGG - chr5_1:41712417-41712436 Msa0731250:intron 45.0%
CCTACATTCTCGAAAGTGGT+GGG + chr5_1:41712751-41712770 None:intergenic 45.0%
ACCTACATTCTCGAAAGTGG+TGG + chr5_1:41712752-41712771 None:intergenic 45.0%
CCAACCTACATTCTCGAAAG+TGG + chr5_1:41712755-41712774 None:intergenic 45.0%
CCACTTTCGAGAATGTAGGT+TGG - chr5_1:41712752-41712771 Msa0731250:intron 45.0%
CAAAACCTGAGAGGATCCAT+AGG + chr5_1:41712829-41712848 None:intergenic 45.0%
GGATTGAAACAACCACTTCG+AGG + chr5_1:41713548-41713567 None:intergenic 45.0%
!! ATTGTGTCTGGGGTTGATAG+AGG + chr5_1:41713815-41713834 None:intergenic 45.0%
AAGAACTATTGTACTCCCCC+TGG - chr5_1:41714308-41714327 Msa0731250:intron 45.0%
GTTTAGGGATTTGTCCTCTG+CGG - chr5_1:41714660-41714679 Msa0731250:intron 45.0%
AAATGAACCATACACCGCAG+AGG + chr5_1:41714677-41714696 None:intergenic 45.0%
GCTTGCATGTTACCATCGTT+TGG + chr5_1:41714763-41714782 None:intergenic 45.0%
ACGATGGTAACATGCAAGCA+TGG - chr5_1:41714764-41714783 Msa0731250:CDS 45.0%
GGCATGTTCATTTGTCCATG+TGG + chr5_1:41714892-41714911 None:intergenic 45.0%
TCAACTTGTGAGGCAGTGAT+TGG + chr5_1:41714913-41714932 None:intergenic 45.0%
TTTGGGTGGTTCAACTTGTG+AGG + chr5_1:41714923-41714942 None:intergenic 45.0%
CGACACTTAAAAAGGAACGG+AGG + chr5_1:41717133-41717152 None:intergenic 45.0%
! GTGATGGAGTCTGTAGTTTG+TGG - chr5_1:41718092-41718111 Msa0731250:intron 45.0%
! TGCACTAATTTGTGGCTCGT+AGG - chr5_1:41718421-41718440 Msa0731250:intron 45.0%
! GCACTAATTTGTGGCTCGTA+GGG - chr5_1:41718422-41718441 Msa0731250:intron 45.0%
TGGTCAAGATCCTAACCCAT+AGG + chr5_1:41709068-41709087 None:intergenic 45.0%
TGGGAAAATTGCGGAGACAA+AGG + chr5_1:41718999-41719018 None:intergenic 45.0%
TCTACTGCCTCAATGAAGTC+CGG - chr5_1:41719628-41719647 Msa0731250:intron 45.0%
!! ATCTCAGAGTTGATGTCTCC+CGG + chr5_1:41719650-41719669 None:intergenic 45.0%
GAGGTAAGAACATGTCACCA+TGG - chr5_1:41710572-41710591 Msa0731250:intron 45.0%
GGTGGTAGGAGTTTAAACTC+CGG + chr5_1:41720062-41720081 None:intergenic 45.0%
!! ATGTTGTGGTGGATGAACTC+AGG - chr5_1:41720315-41720334 Msa0731250:intron 45.0%
!! TGTTGTGGTGGATGAACTCA+GGG - chr5_1:41720316-41720335 Msa0731250:intron 45.0%
GTGGCATCATATCTTGGATG+TGG + chr5_1:41720865-41720884 None:intergenic 45.0%
GTCCATGTGGCATCATATCT+TGG + chr5_1:41714879-41714898 None:intergenic 45.0%
GGCATGTTCATTTGTCCATG+TGG + chr5_1:41714892-41714911 None:intergenic 45.0%
TCAACTTGTGAGGCAGTGAT+TGG + chr5_1:41714913-41714932 None:intergenic 45.0%
TTTGGGTGGTTCAACTTGTG+AGG + chr5_1:41714923-41714942 None:intergenic 45.0%
!! AAAATAAAATAAAATAAAGA+AGG + chr5_1:41709478-41709497 None:intergenic 5.0%
!!! AAAATTTTAAAAAAATTGAA+AGG - chr5_1:41710180-41710199 Msa0731250:intron 5.0%
!!! TTTTATATTTATATAGTTTA+GGG + chr5_1:41710664-41710683 None:intergenic 5.0%
!!! TTTTTATATTTATATAGTTT+AGG + chr5_1:41710665-41710684 None:intergenic 5.0%
!! ATTAATAATTAATACAATTT+AGG + chr5_1:41711835-41711854 None:intergenic 5.0%
!!! AAAAAAAAACATTTATTTTA+AGG - chr5_1:41715460-41715479 Msa0731250:intron 5.0%
!!! TAATAAACTTTAAAAAAAAT+TGG - chr5_1:41715559-41715578 Msa0731250:intron 5.0%
!!! AATAAACTTTAAAAAAAATT+GGG - chr5_1:41715560-41715579 Msa0731250:intron 5.0%
!!! AATTAATATTTTTTTTTTTG+TGG + chr5_1:41720083-41720102 None:intergenic 5.0%
!! CTGCAGGGGTATTCAGAACA+AGG - chr5_1:41709968-41709987 Msa0731250:intron 50.0%
!! CAGGGGTATTCAGAACAAGG+AGG - chr5_1:41709971-41709990 Msa0731250:intron 50.0%
TTTGTCGTCGAAACGCTCTG+TGG - chr5_1:41710718-41710737 Msa0731250:intron 50.0%
GAGAGCTAATTAAGAGGGGG+TGG - chr5_1:41710743-41710762 Msa0731250:intron 50.0%
!!! AGGTAGGGAGCTGGTTTTAG+TGG - chr5_1:41710778-41710797 Msa0731250:intron 50.0%
!!! GGTAGGGAGCTGGTTTTAGT+GGG - chr5_1:41710779-41710798 Msa0731250:intron 50.0%
AAAACAGAGGCGGCCTACAA+TGG + chr5_1:41710824-41710843 None:intergenic 50.0%
! TTGTAGGCCGCCTCTGTTTT+TGG - chr5_1:41710824-41710843 Msa0731250:intron 50.0%
!! TGTAGGCCGCCTCTGTTTTT+GGG - chr5_1:41710825-41710844 Msa0731250:intron 50.0%
! AACTCAACAAGGGCTAGCGA+CGG + chr5_1:41710859-41710878 None:intergenic 50.0%
! CGCTAGCCCTTGTTGAGTTT+TGG - chr5_1:41710860-41710879 Msa0731250:intron 50.0%
AGGCCCCCAAAACTCAACAA+GGG + chr5_1:41710869-41710888 None:intergenic 50.0%
AGTTGCAACCTTGTCTGGCT+AGG - chr5_1:41711036-41711055 Msa0731250:intron 50.0%
CAACCTTGTCTGGCTAGGTA+TGG - chr5_1:41711041-41711060 Msa0731250:intron 50.0%
ACACCATACCTAGCCAGACA+AGG + chr5_1:41711047-41711066 None:intergenic 50.0%
! TGTTTGATGGATCGAGGGTG+AGG - chr5_1:41711069-41711088 Msa0731250:intron 50.0%
! GTTTGATGGATCGAGGGTGA+GGG - chr5_1:41711070-41711089 Msa0731250:intron 50.0%
! TTTGATGGATCGAGGGTGAG+GGG - chr5_1:41711071-41711090 Msa0731250:intron 50.0%
!! TGAGGGGTGCCTTGTTGATT+TGG - chr5_1:41711087-41711106 Msa0731250:intron 50.0%
TTGATGAACCGGAGGGTGAT+AGG - chr5_1:41711200-41711219 Msa0731250:intron 50.0%
!! CTCCACACATCTCTAGAGCT+GGG + chr5_1:41711272-41711291 None:intergenic 50.0%
GGGTGAGTAATGACAATGGG+TGG - chr5_1:41711322-41711341 Msa0731250:intron 50.0%
CCCTGGTTTCAATACCCATG+AGG + chr5_1:41711423-41711442 None:intergenic 50.0%
CCCAACACCTAATAAAGCCC+TGG + chr5_1:41711440-41711459 None:intergenic 50.0%
TCTCTGCATGACACGTGACA+AGG + chr5_1:41712164-41712183 None:intergenic 50.0%
GTCACGTGTCATGCAGAGAA+AGG - chr5_1:41712165-41712184 Msa0731250:intron 50.0%
ACACGACACGTGTCTGACAT+CGG - chr5_1:41712351-41712370 Msa0731250:intron 50.0%
CCCACCACTTTCGAGAATGT+AGG - chr5_1:41712748-41712767 Msa0731250:intron 50.0%
! CGAGAATGTAGGTTGGCTAC+AGG - chr5_1:41712759-41712778 Msa0731250:intron 50.0%
! GTAGGTTGGCTACAGGATAG+TGG - chr5_1:41712766-41712785 Msa0731250:intron 50.0%
!! TCTGGGGTTGATAGAGGATG+AGG + chr5_1:41713809-41713828 None:intergenic 50.0%
ATATGCGTTTGGAGGAGGGT+GGG + chr5_1:41713849-41713868 None:intergenic 50.0%
TATATGCGTTTGGAGGAGGG+TGG + chr5_1:41713850-41713869 None:intergenic 50.0%
GATTTGTCCTCTGCGGTGTA+TGG - chr5_1:41714667-41714686 Msa0731250:CDS 50.0%
AACATGCAAGCATGGCCACA+AGG - chr5_1:41714772-41714791 Msa0731250:CDS 50.0%
AGGCAATCACGTTTGGCAGA+TGG + chr5_1:41718158-41718177 None:intergenic 50.0%
! GATTCCTGGGAGTATACCTG+CGG + chr5_1:41718977-41718996 None:intergenic 50.0%
TGCGGAGACAAAGGATTCCT+GGG + chr5_1:41718990-41719009 None:intergenic 50.0%
TTGCGGAGACAAAGGATTCC+TGG + chr5_1:41718991-41719010 None:intergenic 50.0%
!! TTGCAGGGGCATTCAGAACA+AGG - chr5_1:41719118-41719137 Msa0731250:intron 50.0%
CTACTGCCTCAATGAAGTCC+GGG - chr5_1:41719629-41719648 Msa0731250:intron 50.0%
ATGTCTCCCGGACTTCATTG+AGG + chr5_1:41710539-41710558 None:intergenic 50.0%
TCTCTGCATGACACGTGACA+AGG + chr5_1:41712164-41712183 None:intergenic 50.0%
GTCACGTGTCATGCAGAGAA+AGG - chr5_1:41712165-41712184 Msa0731250:intron 50.0%
ACTCATGGTTGCATGGTTGC+AGG - chr5_1:41720710-41720729 Msa0731250:intron 50.0%
AGAGTATACCTGCGGTAGGG+TGG + chr5_1:41709806-41709825 None:intergenic 55.0%
!!! AGGGAGCTGGTTTTAGTGGG+TGG - chr5_1:41710782-41710801 Msa0731250:intron 55.0%
!!! GGGAGCTGGTTTTAGTGGGT+GGG - chr5_1:41710783-41710802 Msa0731250:intron 55.0%
!!! GGAGCTGGTTTTAGTGGGTG+GGG - chr5_1:41710784-41710803 Msa0731250:intron 55.0%
! TTTAGTGGGTGGGGAGCTCT+TGG - chr5_1:41710793-41710812 Msa0731250:intron 55.0%
GAGGCCCCCAAAACTCAACA+AGG + chr5_1:41710870-41710889 None:intergenic 55.0%
TGTCTTGGATTCTGGCGAGC+CGG - chr5_1:41710980-41710999 Msa0731250:intron 55.0%
ATGAACCGGAGGGTGATAGG+TGG - chr5_1:41711203-41711222 Msa0731250:intron 55.0%
!! CCTCCACACATCTCTAGAGC+TGG + chr5_1:41711273-41711292 None:intergenic 55.0%
!! CCAGCTCTAGAGATGTGTGG+AGG - chr5_1:41711270-41711289 Msa0731250:intron 55.0%
! GGTGGTGCGGTTTCTTTTGG+TGG - chr5_1:41711390-41711409 Msa0731250:intron 55.0%
CAGCTCCTATGGATCCTCTC+AGG - chr5_1:41712821-41712840 Msa0731250:intron 55.0%
! CTGGGAGTATACCTGCGGTA+GGG + chr5_1:41718972-41718991 None:intergenic 55.0%
!! CAGGGGCATTCAGAACAAGG+AGG - chr5_1:41719121-41719140 Msa0731250:intron 55.0%
CTCAAGGCCACACACACTCG+AGG + chr5_1:41710889-41710908 None:intergenic 60.0%
AACCGGAGGGTGATAGGTGG+CGG - chr5_1:41711206-41711225 Msa0731250:intron 60.0%
TTCCGCCACCTATCACCCTC+CGG + chr5_1:41711211-41711230 None:intergenic 60.0%
!! GGCCCAGCTCTAGAGATGTG+TGG - chr5_1:41711267-41711286 Msa0731250:intron 60.0%
GGAGTATACCTGCGGTAGGG+TGG + chr5_1:41718969-41718988 None:intergenic 60.0%
! CCTGGGAGTATACCTGCGGT+AGG + chr5_1:41718973-41718992 None:intergenic 60.0%
CCTACCGCAGGTATACTCCC+AGG - chr5_1:41718970-41718989 Msa0731250:intron 60.0%
TTCCTGAGCCACCCTACCGC+AGG - chr5_1:41709795-41709814 Msa0731250:intron 65.0%
TACCTGCGGTAGGGTGGCTC+AGG + chr5_1:41709800-41709819 None:intergenic 65.0%
TTGGGGGCCTCGAGTGTGTG+TGG - chr5_1:41710879-41710898 Msa0731250:intron 65.0%
TTCCTGAGCCACCCTACCGC+AGG - chr5_1:41709795-41709814 Msa0731250:intron 65.0%
TACCTGCGGTAGGGTGGCTC+AGG + chr5_1:41709800-41709819 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 41708594 41721000 41708594 ID=Msa0731250;Name=Msa0731250
chr5_1 mRNA 41708594 41721000 41708594 ID=Msa0731250-mRNA-1;Parent=Msa0731250;Name=Msa0731250-mRNA-1;_AED=0.12;_eAED=0.18;_QI=0|0|0|1|0.61|0.64|14|0|444
chr5_1 exon 41720816 41721000 41720816 ID=Msa0731250-mRNA-1:exon:12113;Parent=Msa0731250-mRNA-1
chr5_1 exon 41719923 41719976 41719923 ID=Msa0731250-mRNA-1:exon:12112;Parent=Msa0731250-mRNA-1
chr5_1 exon 41719778 41719810 41719778 ID=Msa0731250-mRNA-1:exon:12111;Parent=Msa0731250-mRNA-1
chr5_1 exon 41719602 41719620 41719602 ID=Msa0731250-mRNA-1:exon:12110;Parent=Msa0731250-mRNA-1
chr5_1 exon 41719181 41719242 41719181 ID=Msa0731250-mRNA-1:exon:12109;Parent=Msa0731250-mRNA-1
chr5_1 exon 41719020 41719047 41719020 ID=Msa0731250-mRNA-1:exon:12108;Parent=Msa0731250-mRNA-1
chr5_1 exon 41717604 41717665 41717604 ID=Msa0731250-mRNA-1:exon:12107;Parent=Msa0731250-mRNA-1
chr5_1 exon 41717408 41717507 41717408 ID=Msa0731250-mRNA-1:exon:12106;Parent=Msa0731250-mRNA-1
chr5_1 exon 41716752 41716852 41716752 ID=Msa0731250-mRNA-1:exon:12105;Parent=Msa0731250-mRNA-1
chr5_1 exon 41714861 41714928 41714861 ID=Msa0731250-mRNA-1:exon:12104;Parent=Msa0731250-mRNA-1
chr5_1 exon 41714667 41714854 41714667 ID=Msa0731250-mRNA-1:exon:12103;Parent=Msa0731250-mRNA-1
chr5_1 exon 41710075 41710140 41710075 ID=Msa0731250-mRNA-1:exon:12102;Parent=Msa0731250-mRNA-1
chr5_1 exon 41709205 41709412 41709205 ID=Msa0731250-mRNA-1:exon:12101;Parent=Msa0731250-mRNA-1
chr5_1 exon 41708594 41708754 41708594 ID=Msa0731250-mRNA-1:exon:12100;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41720816 41721000 41720816 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41719923 41719976 41719923 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41719778 41719810 41719778 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41719602 41719620 41719602 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41719181 41719242 41719181 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41719020 41719047 41719020 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41717604 41717665 41717604 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41717408 41717507 41717408 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41716752 41716852 41716752 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41714861 41714928 41714861 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41714667 41714854 41714667 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41710075 41710140 41710075 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41709205 41709412 41709205 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
chr5_1 CDS 41708594 41708754 41708594 ID=Msa0731250-mRNA-1:cds;Parent=Msa0731250-mRNA-1
Gene Sequence

>Msa0731250

ATGGGTCGGGTTAAACTTGAAATAAAAAGAATAGAGAACACAACGAATCGGCAAGTTACGTTTTCAAAGCGTAGAAATGGTCTCATCAAAAAAGCTTATGAGTTATCAATCCTTTGTGATATTGATATTGCTCTTATAATGTTTTCTCCATCAAATCGTCTTAGTCATTTTTCGGGGAAAAGAAGGATAGAAGATGTTTTAAGTCGTTACATTAATCTTCCTGACCAAGAAAGAGATAATGCTGTAAGTTTTCCTGAGCCACCCTACCGCAGGGGTATTCAGAACAAGGAGTATTTTCTCAGGATTCTTCAGCAGTTGAGAAGTGAAAATGACGTATCCCTTCATATGTCCAATCCGGGAGACATTAACTCTGAGATTGAGGAACTCCAACAAGAAGTTTGTAGATTACAACAACAACTTCAAATGGCAGAGGAACAGATAAGGGTATACGAACCCGACCCATTAAAGATGACATCTATCGCAGAGCTTGAAACCAGTGAAAAAAACGTAGTAGAAACCTTGTCACGTGTCATGCAGAGAAAGGGAATGCCCACCACTTTCGAGAATGTAGGTTGGCTACAGGATAGTGGTCAGAACCATTCGCATAATATTTTTGATACATCAGCTCCTATGGATCCTCTCAGGGATTTGTCCTCTGCGGTGTATGGTTCATTTTCACAAGGAACAAGTTCAAATGTTGTTGATCAAAGAGGAGAGTGCCATGTAACAAATCCAAACGATGGTAACATGCAAGCATGGCCACAAGGATACACATTATATCCTCATCAACAACATCATCATATTCAACATGACATAGTAGGAACTGATCATCATCATCATCACCACATTCAAGATATGATGCCACATGGACAAATGAACATGCCAATCACTGCCTCACAATATTTTCTCAGGATTCTCCAGCAGTTGAGAAGTGAAAATGACGTATCCCTTCATATGTCCAAGTTCGAACTCCAACAAGAAGTTTGTAGATTACAACAACAACTTCAAATGGCAGAGGAACAGATAAGGTTCATGATTAATCTTTGTATTAAGATTGTCCAAAGTTTGTCTATTTTTTTTTTCTCCAATAATTGTTCTAATGTTGTGGTGGATGAACTCAGGGTATACGAACCCGACCCATTAAAGATGACATCTATTGCAGAGCTTGAAACCAGAACTGATCATCATCATCATCACCACATCCAAGATATGATGCCACATGGACAAATGAACATGCCAATCACTGCCTCACAAGTTGAACCACCCAAAATTGAATCATCAACAGATCAATATGATCAATGTAAACAACCTAATCATCAGTTTCATGCTCAATGA
Protein sequence

>Msa0731250

MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSNRLSHFSGKRRIEDVLSRYINLPDQERDNAVSFPEPPYRRGIQNKEYFLRILQQLRSENDVSLHMSNPGDINSEIEELQQEVCRLQQQLQMAEEQIRVYEPDPLKMTSIAELETSEKNVVETLSRVMQRKGMPTTFENVGWLQDSGQNHSHNIFDTSAPMDPLRDLSSAVYGSFSQGTSSNVVDQRGECHVTNPNDGNMQAWPQGYTLYPHQQHHHIQHDIVGTDHHHHHHIQDMMPHGQMNMPITASQYFLRILQQLRSENDVSLHMSKFELQQEVCRLQQQLQMAEEQIRFMINLCIKIVQSLSIFFFSNNCSNVVVDELRVYEPDPLKMTSIAELETRTDHHHHHHIQDMMPHGQMNMPITASQVEPPKIESSTDQYDQCKQPNHQFHAQ*