Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731810 | XP_024636500.1 | 94.470 | 217 | 7 | 1 | 1 | 212 | 22 | 238 | 1.89e-150 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731810 | sp|Q8VWG3|TT1_ARATH | 66.010 | 203 | 54 | 2 | 20 | 207 | 83 | 285 | 2.79e-95 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731810 | A0A396IBK2 | 94.470 | 217 | 7 | 1 | 1 | 212 | 16 | 232 | 1.26e-150 | 427 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0731810 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731810 | MtrunA17_Chr4g0053341 | 94.470 | 217 | 7 | 1 | 1 | 212 | 16 | 232 | 2.42e-154 | 427 |
| Msa0731810 | MtrunA17_Chr8g0352011 | 68.750 | 208 | 45 | 3 | 18 | 205 | 110 | 317 | 5.75e-99 | 290 |
| Msa0731810 | MtrunA17_Chr1g0173841 | 63.636 | 220 | 48 | 3 | 18 | 205 | 147 | 366 | 3.93e-94 | 280 |
| Msa0731810 | MtrunA17_Chr5g0422571 | 65.672 | 201 | 61 | 3 | 15 | 209 | 59 | 257 | 5.27e-94 | 276 |
| Msa0731810 | MtrunA17_Chr2g0321291 | 60.360 | 222 | 71 | 2 | 6 | 210 | 68 | 289 | 6.89e-93 | 274 |
| Msa0731810 | MtrunA17_Chr7g0258011 | 63.810 | 210 | 52 | 1 | 20 | 205 | 118 | 327 | 8.34e-93 | 275 |
| Msa0731810 | MtrunA17_Chr2g0328921 | 66.337 | 202 | 54 | 3 | 18 | 205 | 88 | 289 | 1.29e-91 | 271 |
| Msa0731810 | MtrunA17_Chr4g0026521 | 62.944 | 197 | 63 | 1 | 21 | 207 | 75 | 271 | 2.33e-88 | 262 |
| Msa0731810 | MtrunA17_Chr1g0198651 | 67.816 | 174 | 51 | 2 | 41 | 209 | 87 | 260 | 3.33e-85 | 254 |
| Msa0731810 | MtrunA17_Chr1g0200421 | 37.557 | 221 | 111 | 9 | 2 | 204 | 181 | 392 | 7.07e-31 | 118 |
| Msa0731810 | MtrunA17_Chr2g0320341 | 37.255 | 153 | 87 | 5 | 60 | 205 | 238 | 388 | 1.81e-24 | 99.4 |
| Msa0731810 | MtrunA17_Chr8g0382121 | 38.411 | 151 | 85 | 6 | 59 | 204 | 118 | 265 | 5.62e-21 | 88.6 |
| Msa0731810 | MtrunA17_Chr1g0181381 | 33.113 | 151 | 92 | 4 | 49 | 198 | 49 | 191 | 1.84e-20 | 89.0 |
| Msa0731810 | MtrunA17_Chr4g0029521 | 34.211 | 152 | 89 | 5 | 49 | 198 | 49 | 191 | 4.43e-20 | 87.8 |
| Msa0731810 | MtrunA17_Chr7g0263941 | 35.099 | 151 | 88 | 5 | 49 | 198 | 45 | 186 | 9.22e-20 | 86.3 |
| Msa0731810 | MtrunA17_Chr2g0324991 | 36.054 | 147 | 84 | 5 | 49 | 193 | 3 | 141 | 9.48e-20 | 82.0 |
| Msa0731810 | MtrunA17_Chr2g0326381 | 34.868 | 152 | 88 | 5 | 49 | 198 | 43 | 185 | 9.62e-20 | 86.3 |
| Msa0731810 | MtrunA17_Chr1g0185121 | 34.194 | 155 | 91 | 5 | 46 | 198 | 48 | 193 | 1.44e-19 | 85.9 |
| Msa0731810 | MtrunA17_Chr1g0210821 | 33.775 | 151 | 90 | 4 | 49 | 198 | 55 | 196 | 1.90e-19 | 85.9 |
| Msa0731810 | MtrunA17_Chr1g0162971 | 34.437 | 151 | 89 | 4 | 49 | 198 | 52 | 193 | 3.35e-19 | 85.1 |
| Msa0731810 | MtrunA17_Chr1g0163001 | 33.775 | 151 | 90 | 4 | 49 | 198 | 54 | 195 | 3.58e-19 | 85.1 |
| Msa0731810 | MtrunA17_Chr1g0199101 | 35.099 | 151 | 88 | 5 | 49 | 198 | 58 | 199 | 3.86e-19 | 85.1 |
| Msa0731810 | MtrunA17_Chr8g0342421 | 32.911 | 158 | 95 | 5 | 43 | 198 | 66 | 214 | 7.28e-19 | 84.3 |
| Msa0731810 | MtrunA17_Chr1g0151351 | 32.895 | 152 | 91 | 5 | 49 | 198 | 52 | 194 | 1.29e-18 | 83.2 |
| Msa0731810 | MtrunA17_Chr4g0040571 | 33.544 | 158 | 94 | 5 | 43 | 198 | 43 | 191 | 1.38e-18 | 83.6 |
| Msa0731810 | MtrunA17_Chr8g0373541 | 33.113 | 151 | 91 | 4 | 49 | 198 | 44 | 185 | 2.16e-18 | 82.8 |
| Msa0731810 | MtrunA17_Chr1g0191991 | 33.544 | 158 | 94 | 5 | 43 | 198 | 67 | 215 | 4.14e-18 | 82.0 |
| Msa0731810 | MtrunA17_Chr2g0330171 | 32.911 | 158 | 95 | 5 | 43 | 198 | 50 | 198 | 5.34e-18 | 81.6 |
| Msa0731810 | MtrunA17_Chr7g0268961 | 32.895 | 152 | 84 | 6 | 55 | 198 | 33 | 174 | 1.29e-17 | 80.5 |
| Msa0731810 | MtrunA17_Chr3g0123941 | 36.000 | 150 | 87 | 7 | 59 | 204 | 130 | 274 | 9.20e-17 | 77.4 |
| Msa0731810 | MtrunA17_Chr3g0141431 | 31.081 | 148 | 92 | 4 | 49 | 194 | 33 | 172 | 9.13e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731810 | AT1G34790.1 | 66.010 | 203 | 54 | 2 | 20 | 207 | 83 | 285 | 2.84e-96 | 283 |
| Msa0731810 | AT3G57670.1 | 69.832 | 179 | 54 | 0 | 27 | 205 | 177 | 355 | 3.69e-91 | 272 |
| Msa0731810 | AT1G51220.1 | 76.250 | 160 | 38 | 0 | 52 | 211 | 163 | 322 | 2.77e-90 | 268 |
| Msa0731810 | AT3G20880.1 | 58.636 | 220 | 56 | 2 | 19 | 204 | 175 | 393 | 5.19e-89 | 268 |
| Msa0731810 | AT1G13290.1 | 65.128 | 195 | 58 | 4 | 20 | 208 | 54 | 244 | 2.65e-87 | 260 |
| Msa0731810 | AT1G08290.1 | 73.885 | 157 | 40 | 1 | 52 | 207 | 165 | 321 | 6.25e-85 | 255 |
| Msa0731810 | AT1G34370.3 | 41.667 | 168 | 87 | 6 | 46 | 204 | 12 | 177 | 1.56e-30 | 114 |
| Msa0731810 | AT1G34370.2 | 37.500 | 200 | 114 | 6 | 14 | 204 | 190 | 387 | 8.52e-30 | 115 |
| Msa0731810 | AT1G34370.1 | 37.500 | 200 | 114 | 6 | 14 | 204 | 190 | 387 | 8.52e-30 | 115 |
| Msa0731810 | AT5G22890.1 | 37.580 | 157 | 89 | 5 | 60 | 209 | 211 | 365 | 5.22e-24 | 98.2 |
| Msa0731810 | AT5G03150.1 | 34.437 | 151 | 90 | 4 | 49 | 198 | 64 | 206 | 8.01e-21 | 90.1 |
| Msa0731810 | AT5G44160.1 | 34.810 | 158 | 92 | 5 | 43 | 198 | 41 | 189 | 8.03e-20 | 87.4 |
| Msa0731810 | AT2G02080.1 | 33.158 | 190 | 106 | 7 | 14 | 198 | 33 | 206 | 1.30e-19 | 86.7 |
| Msa0731810 | AT2G02080.4 | 33.158 | 190 | 106 | 7 | 14 | 198 | 33 | 206 | 1.30e-19 | 86.7 |
| Msa0731810 | AT2G02080.5 | 33.158 | 190 | 106 | 7 | 14 | 198 | 33 | 206 | 1.30e-19 | 86.7 |
| Msa0731810 | AT2G02080.3 | 33.158 | 190 | 106 | 7 | 14 | 198 | 33 | 206 | 1.30e-19 | 86.7 |
| Msa0731810 | AT5G44160.2 | 34.437 | 151 | 89 | 4 | 49 | 198 | 9 | 150 | 1.51e-19 | 86.3 |
| Msa0731810 | AT5G60470.2 | 35.484 | 155 | 89 | 5 | 43 | 194 | 48 | 194 | 1.69e-19 | 86.3 |
| Msa0731810 | AT1G14580.3 | 32.258 | 186 | 115 | 5 | 14 | 198 | 44 | 219 | 1.87e-19 | 86.3 |
| Msa0731810 | AT5G60470.3 | 34.320 | 169 | 98 | 6 | 29 | 194 | 32 | 190 | 1.90e-19 | 86.3 |
| Msa0731810 | AT1G14580.1 | 32.258 | 186 | 115 | 5 | 14 | 198 | 30 | 205 | 2.15e-19 | 85.9 |
| Msa0731810 | AT1G14580.2 | 32.258 | 186 | 115 | 5 | 14 | 198 | 30 | 205 | 2.15e-19 | 85.9 |
| Msa0731810 | AT5G60470.1 | 35.135 | 148 | 86 | 4 | 49 | 194 | 46 | 185 | 2.97e-19 | 85.5 |
| Msa0731810 | AT1G55110.3 | 33.548 | 155 | 92 | 5 | 46 | 198 | 71 | 216 | 4.82e-19 | 85.1 |
| Msa0731810 | AT1G55110.1 | 33.548 | 155 | 92 | 5 | 46 | 198 | 71 | 216 | 4.82e-19 | 85.1 |
| Msa0731810 | AT1G55110.2 | 33.548 | 155 | 92 | 5 | 46 | 198 | 71 | 216 | 4.82e-19 | 85.1 |
| Msa0731810 | AT2G02070.2 | 34.932 | 146 | 85 | 4 | 54 | 198 | 68 | 204 | 4.89e-19 | 85.1 |
| Msa0731810 | AT2G02070.1 | 34.932 | 146 | 85 | 4 | 54 | 198 | 68 | 204 | 4.89e-19 | 85.1 |
| Msa0731810 | AT1G03840.1 | 33.544 | 158 | 94 | 5 | 43 | 198 | 45 | 193 | 5.40e-19 | 85.1 |
| Msa0731810 | AT5G66730.1 | 33.553 | 152 | 89 | 5 | 49 | 198 | 43 | 184 | 6.61e-19 | 84.7 |
| Msa0731810 | AT3G45260.2 | 35.443 | 158 | 92 | 5 | 43 | 198 | 43 | 192 | 7.83e-19 | 84.3 |
| Msa0731810 | AT3G45260.1 | 35.443 | 158 | 92 | 5 | 43 | 198 | 43 | 192 | 7.83e-19 | 84.3 |
| Msa0731810 | AT1G03840.2 | 33.121 | 157 | 94 | 5 | 43 | 198 | 45 | 191 | 7.98e-19 | 84.3 |
| Msa0731810 | AT2G02080.6 | 36.842 | 133 | 74 | 4 | 67 | 198 | 6 | 129 | 3.58e-18 | 82.4 |
| Msa0731810 | AT2G02080.2 | 36.842 | 133 | 74 | 4 | 67 | 198 | 6 | 129 | 3.58e-18 | 82.4 |
| Msa0731810 | AT3G50700.1 | 31.319 | 182 | 110 | 7 | 22 | 198 | 15 | 186 | 9.58e-18 | 81.3 |
| Msa0731810 | AT4G02670.2 | 33.117 | 154 | 94 | 4 | 46 | 198 | 63 | 208 | 1.14e-17 | 80.9 |
| Msa0731810 | AT4G02670.1 | 33.117 | 154 | 94 | 4 | 46 | 198 | 61 | 206 | 1.14e-17 | 80.9 |
| Msa0731810 | AT3G13810.6 | 31.818 | 154 | 96 | 4 | 46 | 198 | 59 | 204 | 2.18e-17 | 80.5 |
| Msa0731810 | AT3G13810.5 | 31.818 | 154 | 96 | 4 | 46 | 198 | 73 | 218 | 2.51e-17 | 80.1 |
| Msa0731810 | AT3G13810.4 | 31.818 | 154 | 96 | 4 | 46 | 198 | 78 | 223 | 2.57e-17 | 80.1 |
| Msa0731810 | AT3G13810.1 | 31.818 | 154 | 96 | 4 | 46 | 198 | 78 | 223 | 2.57e-17 | 80.1 |
| Msa0731810 | AT3G13810.3 | 31.788 | 151 | 94 | 4 | 49 | 198 | 68 | 210 | 4.05e-17 | 79.7 |
| Msa0731810 | AT3G13810.2 | 31.788 | 151 | 94 | 4 | 49 | 198 | 82 | 224 | 4.07e-17 | 79.7 |
Find 45 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCATCTGGTGGGATTTA+AGG | 0.074753 | 5_1:+43336388 | Msa0731810:CDS |
| CTAAGCCATTGAAGGATTTC+AGG | 0.257197 | 5_1:+43336155 | Msa0731810:CDS |
| CCACCAGATGAAGAAGAAAA+AGG | 0.280585 | 5_1:-43336379 | None:intergenic |
| ATCAAGTTCCTAACAATTAC+TGG | 0.290004 | 5_1:+43335404 | Msa0731810:CDS |
| CATATCAAAGCATTTGGATT+TGG | 0.298690 | 5_1:+43336349 | Msa0731810:CDS |
| AGTGAATCACCAAATCAAAA+TGG | 0.332679 | 5_1:+43335364 | Msa0731810:CDS |
| AAGGATCATATCAAAGCATT+TGG | 0.345398 | 5_1:+43336343 | Msa0731810:CDS |
| GTTGGTATCCAGTAATTGTT+AGG | 0.349260 | 5_1:-43335412 | None:intergenic |
| GGTGATTCACTTGAATTGTT+AGG | 0.354362 | 5_1:-43335352 | None:intergenic |
| CAAACATAAGAGGTCACTTA+AGG | 0.365934 | 5_1:+43336324 | Msa0731810:CDS |
| TCCTTCAATGGCTTAGCTCT+TGG | 0.384210 | 5_1:-43336148 | None:intergenic |
| CAATCGTTACAACAACCTTC+AGG | 0.392156 | 5_1:+43335495 | Msa0731810:CDS |
| TAATTGTTAGGAACTTGATT+TGG | 0.405327 | 5_1:-43335400 | None:intergenic |
| GTTAGGAAGGCCTATTTGTA+AGG | 0.411385 | 5_1:-43335335 | None:intergenic |
| GTCACAGTGGCCTTACAAAT+AGG | 0.422585 | 5_1:+43335325 | Msa0731810:CDS |
| CCATGCTATTGTTGTTCAAA+GGG | 0.430924 | 5_1:+43336103 | Msa0731810:CDS |
| GTTCAGATTTCAAACATAAG+AGG | 0.434145 | 5_1:+43336314 | Msa0731810:CDS |
| ACTCAAGAACAGATTCTCAT+TGG | 0.435131 | 5_1:+43335433 | Msa0731810:CDS |
| ACCATGCTATTGTTGTTCAA+AGG | 0.475949 | 5_1:+43336102 | Msa0731810:CDS |
| CCGAAAATGTGGGAAGCCAT+TGG | 0.478330 | 5_1:+43336228 | Msa0731810:CDS |
| CAATCACCTTTCACTGCCAA+TGG | 0.484406 | 5_1:-43336244 | None:intergenic |
| GGTCTAACAATGGTCGTGGA+TGG | 0.504798 | 5_1:-43336078 | None:intergenic |
| CATTGGCAGTGAAAGGTGAT+TGG | 0.508045 | 5_1:+43336245 | Msa0731810:CDS |
| TCCAAGAGCTAAGCCATTGA+AGG | 0.510873 | 5_1:+43336147 | Msa0731810:CDS |
| ACGTTTACTTGCCGAAAATG+TGG | 0.517882 | 5_1:+43336217 | Msa0731810:CDS |
| ATGAGAATCTGTTCTTGAGT+TGG | 0.521544 | 5_1:-43335430 | None:intergenic |
| AGTGTCCTGAAATCCTTCAA+TGG | 0.536755 | 5_1:-43336160 | None:intergenic |
| GTCTAACAATGGTCGTGGAT+GGG | 0.548133 | 5_1:-43336077 | None:intergenic |
| GGTAGGTCTAACAATGGTCG+TGG | 0.562164 | 5_1:-43336082 | None:intergenic |
| CGTTTACTTGCCGAAAATGT+GGG | 0.564239 | 5_1:+43336218 | Msa0731810:CDS |
| ATTCACTTGAATTGTTAGGA+AGG | 0.564830 | 5_1:-43335348 | None:intergenic |
| TTGAACAACAATAGCATGGT+AGG | 0.577831 | 5_1:-43336099 | None:intergenic |
| AAGCGTTGGCTTTGTATCTG+TGG | 0.585573 | 5_1:+43336292 | Msa0731810:CDS |
| TTTGGTGATAGATGCATATG+TGG | 0.589947 | 5_1:+43336008 | Msa0731810:intron |
| CACTGCAGACACATTACAAG+AGG | 0.618120 | 5_1:+43336179 | Msa0731810:CDS |
| ACACATTACAAGAGGAAGCA+TGG | 0.621285 | 5_1:+43336187 | Msa0731810:CDS |
| CCCTTTGAACAACAATAGCA+TGG | 0.627956 | 5_1:-43336103 | None:intergenic |
| TTGGTGATAGATGCATATGT+GGG | 0.631361 | 5_1:+43336009 | Msa0731810:intron |
| GGGAAGCCATTGGCAGTGAA+AGG | 0.634540 | 5_1:+43336238 | Msa0731810:CDS |
| ATCATGTTTCAATCAAGCTG+AGG | 0.648432 | 5_1:+43335300 | Msa0731810:CDS |
| CATGGTTCACAGTATCGAAG+AGG | 0.674513 | 5_1:+43336034 | Msa0731810:CDS |
| TAGCATGGTAGGTCTAACAA+TGG | 0.702153 | 5_1:-43336088 | None:intergenic |
| TGGTGATAGATGCATATGTG+GGG | 0.723679 | 5_1:+43336010 | Msa0731810:intron |
| TCAAGCTGAGGATGTCACAG+TGG | 0.732110 | 5_1:+43335312 | Msa0731810:CDS |
| GGTGATAGATGCATATGTGG+GGG | 0.769392 | 5_1:+43336011 | Msa0731810:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATGATTATTCTTTTTT+TGG | + | chr5_1:43331546-43331565 | Msa0731810:intron | 10.0% |
| !!! | TAAATGATTATTCTTTTTTT+GGG | + | chr5_1:43331547-43331566 | Msa0731810:intron | 10.0% |
| !!! | TTGAATTATTTAAATTTTTC+GGG | - | chr5_1:43334562-43334581 | None:intergenic | 10.0% |
| !!! | TTGAATTATTTAAATTTTTC+GGG | - | chr5_1:43334562-43334581 | None:intergenic | 10.0% |
| !! | AAAATAAGATTGAATTGATA+TGG | + | chr5_1:43331435-43331454 | Msa0731810:intron | 15.0% |
| !!! | TAATATTTTTAATGATCCAA+TGG | - | chr5_1:43331495-43331514 | None:intergenic | 15.0% |
| !! | ATTGTATCTATAATATGTAA+TGG | - | chr5_1:43332518-43332537 | None:intergenic | 15.0% |
| !!! | GTTTATATGACTTTTAAAAA+TGG | - | chr5_1:43332924-43332943 | None:intergenic | 15.0% |
| !! | ATTCATCAATTTAACAAAAA+TGG | + | chr5_1:43333804-43333823 | Msa0731810:intron | 15.0% |
| !! | TTCATCAATTTAACAAAAAT+GGG | + | chr5_1:43333805-43333824 | Msa0731810:intron | 15.0% |
| !!! | TCGTTGTTTTTTTAATTTTT+GGG | - | chr5_1:43334448-43334467 | None:intergenic | 15.0% |
| !!! | ATCGTTGTTTTTTTAATTTT+TGG | - | chr5_1:43334449-43334468 | None:intergenic | 15.0% |
| !! | ATTAAAAAAACAACGATTAT+AGG | + | chr5_1:43334452-43334471 | Msa0731810:intron | 15.0% |
| !!! | GTTTTTATACAATTTTATGT+CGG | + | chr5_1:43334601-43334620 | Msa0731810:intron | 15.0% |
| !!! | AATTATTTAAATTTTACGAG+TGG | - | chr5_1:43334787-43334806 | None:intergenic | 15.0% |
| !!! | TTTTAAGTAACATCTCATAT+TGG | + | chr5_1:43330468-43330487 | Msa0731810:intron | 20.0% |
| !!! | TTTTGTTTTGCTTTAATAGT+TGG | + | chr5_1:43330507-43330526 | Msa0731810:intron | 20.0% |
| !!! | ATCAGTAGATTTTAATTACA+GGG | - | chr5_1:43330775-43330794 | None:intergenic | 20.0% |
| !!! | TATCAGTAGATTTTAATTAC+AGG | - | chr5_1:43330776-43330795 | None:intergenic | 20.0% |
| !! | AAGAAATACCATAAATTATG+TGG | - | chr5_1:43330830-43330849 | None:intergenic | 20.0% |
| !! | ATTTATGGTATTTCTTATCT+AGG | + | chr5_1:43330834-43330853 | Msa0731810:intron | 20.0% |
| !! | ATATTACAGTTGAATGAAAA+GGG | - | chr5_1:43330914-43330933 | None:intergenic | 20.0% |
| !! | AATATTACAGTTGAATGAAA+AGG | - | chr5_1:43330915-43330934 | None:intergenic | 20.0% |
| !!! | TGTTAGATTTTTTCAGATTA+TGG | - | chr5_1:43331036-43331055 | None:intergenic | 20.0% |
| !!! | AACAATAAATGATTGGATTT+TGG | - | chr5_1:43331406-43331425 | None:intergenic | 20.0% |
| !! | AATGCAAAACAATAAATGAT+TGG | - | chr5_1:43331413-43331432 | None:intergenic | 20.0% |
| !! | TAATCCATATAAGATTAACA+AGG | + | chr5_1:43332020-43332039 | Msa0731810:intron | 20.0% |
| !! | TTTATATGTTGTGAATATTG+TGG | - | chr5_1:43332097-43332116 | None:intergenic | 20.0% |
| !! | ATTATTGTTAATTGTACTTG+CGG | - | chr5_1:43332222-43332241 | None:intergenic | 20.0% |
| !! | GAAAGTTATTATATGTTATG+TGG | - | chr5_1:43332604-43332623 | None:intergenic | 20.0% |
| !! | CATATAATAACTTTCCATAA+AGG | + | chr5_1:43332609-43332628 | Msa0731810:intron | 20.0% |
| !!! | TTTTATGAATTCATCGTATT+TGG | - | chr5_1:43332812-43332831 | None:intergenic | 20.0% |
| !! | ATGAATTCATAAAAATCACA+AGG | + | chr5_1:43332818-43332837 | Msa0731810:intron | 20.0% |
| !!! | TATATGACTTTTAAAAATGG+TGG | - | chr5_1:43332921-43332940 | None:intergenic | 20.0% |
| !!! | TTAAGTCCAAATAAACATTT+TGG | + | chr5_1:43333105-43333124 | Msa0731810:intron | 20.0% |
| !! | ATACTTCCAAAATGTTTATT+TGG | - | chr5_1:43333114-43333133 | None:intergenic | 20.0% |
| !!! | AATAAACATTTTGGAAGTAT+CGG | + | chr5_1:43333114-43333133 | Msa0731810:intron | 20.0% |
| !! | GAGAAAAAAAAGATGAATTA+TGG | + | chr5_1:43333832-43333851 | Msa0731810:intron | 20.0% |
| !!! | TTTATTTTACTATTGCTAGA+GGG | - | chr5_1:43334190-43334209 | None:intergenic | 20.0% |
| !!! | TTTTATTTTACTATTGCTAG+AGG | - | chr5_1:43334191-43334210 | None:intergenic | 20.0% |
| !! | AAAATAAAACTAGCGAAAAT+CGG | + | chr5_1:43334403-43334422 | Msa0731810:intron | 20.0% |
| !!! | GTTGTTTTTTTAATTTTTGG+GGG | - | chr5_1:43334446-43334465 | None:intergenic | 20.0% |
| !!! | CGTTGTTTTTTTAATTTTTG+GGG | - | chr5_1:43334447-43334466 | None:intergenic | 20.0% |
| !!! | GATTTTATACAATTTTGTGT+CGG | + | chr5_1:43334487-43334506 | Msa0731810:intron | 20.0% |
| !!! | ATTATTTAAATTTTTCGGGT+GGG | - | chr5_1:43334558-43334577 | None:intergenic | 20.0% |
| !!! | AATTATTTAAATTTTTCGGG+TGG | - | chr5_1:43334559-43334578 | None:intergenic | 20.0% |
| !!! | AATTATTTAAATTTTTCGGG+TGG | - | chr5_1:43334559-43334578 | None:intergenic | 20.0% |
| !!! | GCTTTTATACAATTTTATGT+CGG | + | chr5_1:43334715-43334734 | Msa0731810:intron | 20.0% |
| !!! | TTTTCAACGGTTAATTTTAA+TGG | + | chr5_1:43334842-43334861 | Msa0731810:intron | 20.0% |
| !!! | TGGTTAATGTGTTTTAATTA+AGG | - | chr5_1:43335012-43335031 | None:intergenic | 20.0% |
| !!! | TAATTTTAAAGGAAATGCAA+TGG | + | chr5_1:43335096-43335115 | Msa0731810:intron | 20.0% |
| !!! | TTTACAAATCCATTTTGATT+TGG | - | chr5_1:43335376-43335395 | None:intergenic | 20.0% |
| !! | TAATCTCTCCAATAAAAAAA+AGG | + | chr5_1:43335625-43335644 | Msa0731810:intron | 20.0% |
| !!! | AGCATTTACCTTTTTTTTAT+TGG | - | chr5_1:43335636-43335655 | None:intergenic | 20.0% |
| !!! | TAAAATATTGATTGCCATAA+GGG | - | chr5_1:43335895-43335914 | None:intergenic | 20.0% |
| !!! | TTAAAATATTGATTGCCATA+AGG | - | chr5_1:43335896-43335915 | None:intergenic | 20.0% |
| !! | CCAAATTGAAAATATAATCA+GGG | - | chr5_1:43335993-43336012 | None:intergenic | 20.0% |
| !! | ACCAAATTGAAAATATAATC+AGG | - | chr5_1:43335994-43336013 | None:intergenic | 20.0% |
| !!! | TATGCAATTGTTTCTAAGTT+TGG | + | chr5_1:43330794-43330813 | Msa0731810:intron | 25.0% |
| ! | AAATAGAGAAAGTAGACATA+AGG | + | chr5_1:43330861-43330880 | Msa0731810:intron | 25.0% |
| ! | AATAGAGAAAGTAGACATAA+GGG | + | chr5_1:43330862-43330881 | Msa0731810:intron | 25.0% |
| ! | AAATTATGAGGTTGTAACAA+AGG | + | chr5_1:43330888-43330907 | Msa0731810:intron | 25.0% |
| ! | TATGGAACTATAATAATGAC+TGG | - | chr5_1:43331018-43331037 | None:intergenic | 25.0% |
| ! | CAATGGTTATGATTAATTGA+CGG | - | chr5_1:43331478-43331497 | None:intergenic | 25.0% |
| !!! | GTTATTTGCTATTTGAGAAT+TGG | - | chr5_1:43331799-43331818 | None:intergenic | 25.0% |
| !!! | GTTTATTTGACTTTGTGTTT+TGG | - | chr5_1:43331831-43331850 | None:intergenic | 25.0% |
| ! | AAGTCCTTGTTAATCTTATA+TGG | - | chr5_1:43332027-43332046 | None:intergenic | 25.0% |
| !! | ATAATGATAATGAATGATCG+TGG | - | chr5_1:43332124-43332143 | None:intergenic | 25.0% |
| !! | TTGTTAATTGTTGATTGACA+AGG | - | chr5_1:43332193-43332212 | None:intergenic | 25.0% |
| !! | TGCAATTAAGATGTGTTTTA+TGG | - | chr5_1:43332248-43332267 | None:intergenic | 25.0% |
| ! | GATTGCATATATACAAGTAT+TGG | - | chr5_1:43332483-43332502 | None:intergenic | 25.0% |
| !! | ACTATATGTTGTGTGATTTT+TGG | - | chr5_1:43332553-43332572 | None:intergenic | 25.0% |
| ! | AATTGATTGTGAATCCTTTA+TGG | - | chr5_1:43332626-43332645 | None:intergenic | 25.0% |
| !!! | AACTTGTTTTGCTTTGAAAA+TGG | - | chr5_1:43332877-43332896 | None:intergenic | 25.0% |
| !!! | TTTTTGGAAAAATCAACGTT+TGG | + | chr5_1:43332987-43333006 | Msa0731810:intron | 25.0% |
| !! | TCGTCTAACTTTTGTAAAAA+CGG | - | chr5_1:43333014-43333033 | None:intergenic | 25.0% |
| ! | AAAATCAAAAATTGCTGAAC+TGG | + | chr5_1:43333162-43333181 | Msa0731810:intron | 25.0% |
| ! | AAATCAAAAATTGCTGAACT+GGG | + | chr5_1:43333163-43333182 | Msa0731810:intron | 25.0% |
| !!! | TTTGATTTTGGGATGAATTT+GGG | - | chr5_1:43333354-43333373 | None:intergenic | 25.0% |
| !!! | ATTTGATTTTGGGATGAATT+TGG | - | chr5_1:43333355-43333374 | None:intergenic | 25.0% |
| !!! | GGGATTGAAAATTTGATTTT+GGG | - | chr5_1:43333365-43333384 | None:intergenic | 25.0% |
| ! | AAGTGTTTATAGGTCAAAAT+AGG | + | chr5_1:43333410-43333429 | Msa0731810:intron | 25.0% |
| !! | ACTTAAACACATACAAGTTT+TGG | + | chr5_1:43333441-43333460 | Msa0731810:intron | 25.0% |
| ! | AATTGAGAAATTGGTGAATT+TGG | - | chr5_1:43333486-43333505 | None:intergenic | 25.0% |
| ! | TTGAGAATGAATTGAGAAAT+TGG | - | chr5_1:43333495-43333514 | None:intergenic | 25.0% |
| ! | ATGTTCAAATGTATAGTTGT+TGG | - | chr5_1:43333690-43333709 | None:intergenic | 25.0% |
| ! | AGTATATAAACTCTAGTTGT+TGG | - | chr5_1:43334026-43334045 | None:intergenic | 25.0% |
| ! | CTTATTCCTTAAACCTTAAT+GGG | + | chr5_1:43334063-43334082 | Msa0731810:intron | 25.0% |
| ! | TTGAGTGTTAGAATAGAAAT+GGG | - | chr5_1:43334094-43334113 | None:intergenic | 25.0% |
| ! | TTTGAGTGTTAGAATAGAAA+TGG | - | chr5_1:43334095-43334114 | None:intergenic | 25.0% |
| ! | AAATGTTACTACTCACTTAA+CGG | + | chr5_1:43334113-43334132 | Msa0731810:intron | 25.0% |
| !!! | TATTTTAGTCATTTTGGACT+TGG | - | chr5_1:43334288-43334307 | None:intergenic | 25.0% |
| ! | AAATAAAACTAGCGAAAATC+GGG | + | chr5_1:43334404-43334423 | Msa0731810:intron | 25.0% |
| !!! | TTTTTTTAATTTTTGGGGGT+GGG | - | chr5_1:43334442-43334461 | None:intergenic | 25.0% |
| !!! | TACAATTTTATGTCGGTTTT+AGG | + | chr5_1:43334608-43334627 | Msa0731810:intron | 25.0% |
| !!! | TACAATTTTATGTCGGTTTT+AGG | + | chr5_1:43334608-43334627 | Msa0731810:intron | 25.0% |
| !!! | GGCTTTAAACAATTTTTCAA+CGG | + | chr5_1:43334829-43334848 | Msa0731810:intron | 25.0% |
| !!! | GATTAAACTTTAGGATTACT+AGG | - | chr5_1:43334935-43334954 | None:intergenic | 25.0% |
| ! | TTAATTAAGGATCAATTGCT+CGG | - | chr5_1:43334999-43335018 | None:intergenic | 25.0% |
| !! | AAACTTTTTACATTGTCAAG+TGG | - | chr5_1:43335046-43335065 | None:intergenic | 25.0% |
| ! | ATCCCTTGGATATTATAAAT+AGG | + | chr5_1:43335126-43335145 | Msa0731810:intron | 25.0% |
| ! | CTCCTATTTATAATATCCAA+GGG | - | chr5_1:43335131-43335150 | None:intergenic | 25.0% |
| ! | ACTCCTATTTATAATATCCA+AGG | - | chr5_1:43335132-43335151 | None:intergenic | 25.0% |
| !! | GATTTATGACTTTCATTTTG+TGG | - | chr5_1:43335283-43335302 | None:intergenic | 25.0% |
| ! | AAACTTTAATTGAAGTTCCT+AGG | + | chr5_1:43335750-43335769 | Msa0731810:intron | 25.0% |
| ! | AACTTTAATTGAAGTTCCTA+GGG | + | chr5_1:43335751-43335770 | Msa0731810:intron | 25.0% |
| ! | AGTGATTCTCTATAATATCA+AGG | + | chr5_1:43335851-43335870 | Msa0731810:intron | 25.0% |
| !!! | GCAATCAATATTTTAAACCT+TGG | + | chr5_1:43335900-43335919 | Msa0731810:intron | 25.0% |
| !! | CCCTGATTATATTTTCAATT+TGG | + | chr5_1:43335990-43336009 | Msa0731810:intron | 25.0% |
| !! | CTCACTTTTGCTTTAATAGT+CGG | + | chr5_1:43330582-43330601 | Msa0731810:intron | 30.0% |
| !! | TCACTTTTGCTTTAATAGTC+GGG | + | chr5_1:43330583-43330602 | Msa0731810:intron | 30.0% |
| !!! | ACTGCAGTTTTGTTTTTGTT+TGG | + | chr5_1:43330646-43330665 | Msa0731810:intron | 30.0% |
| !!! | CTGCAGTTTTGTTTTTGTTT+GGG | + | chr5_1:43330647-43330666 | Msa0731810:intron | 30.0% |
| TGTAAAATTCTGACTCATGA+GGG | - | chr5_1:43330684-43330703 | None:intergenic | 30.0% | |
| GTTTCTAAGTTTGGATTTCA+TGG | + | chr5_1:43330803-43330822 | Msa0731810:intron | 30.0% | |
| TTCATGGTCCACATAATTTA+TGG | + | chr5_1:43330819-43330838 | Msa0731810:intron | 30.0% | |
| ACATAAGGGAGAAAATTATG+AGG | + | chr5_1:43330876-43330895 | Msa0731810:intron | 30.0% | |
| CATTCAACTGTAATATTCTC+CGG | + | chr5_1:43330918-43330937 | Msa0731810:intron | 30.0% | |
| AGTGAAAGAAATTGTGTGAT+AGG | - | chr5_1:43330947-43330966 | None:intergenic | 30.0% | |
| TGTAATAGAACATGGAAAAG+TGG | - | chr5_1:43330973-43330992 | None:intergenic | 30.0% | |
| AATTGGCATGTAATAGAACA+TGG | - | chr5_1:43330981-43331000 | None:intergenic | 30.0% | |
| TGGAGCAACAATAGATAAAT+TGG | - | chr5_1:43330998-43331017 | None:intergenic | 30.0% | |
| ! | AATAAAAGGAAGTACAAAGC+TGG | + | chr5_1:43331097-43331116 | Msa0731810:intron | 30.0% |
| ! | ATAAAAGGAAGTACAAAGCT+GGG | + | chr5_1:43331098-43331117 | Msa0731810:intron | 30.0% |
| ! | ATTTTATGTATCACCCGTTA+GGG | - | chr5_1:43331159-43331178 | None:intergenic | 30.0% |
| AACTATAAACAACACTTCCA+CGG | + | chr5_1:43331205-43331224 | Msa0731810:intron | 30.0% | |
| !! | GAATTTTCAGAGTATCAAGT+AGG | + | chr5_1:43331293-43331312 | Msa0731810:intron | 30.0% |
| CGTCAATTAATCATAACCAT+TGG | + | chr5_1:43331476-43331495 | Msa0731810:intron | 30.0% | |
| !!! | CTTTTTTTGGGTATAAACAG+TGG | + | chr5_1:43331559-43331578 | Msa0731810:intron | 30.0% |
| TTTACCGCTTATTAGGAATA+GGG | - | chr5_1:43331625-43331644 | None:intergenic | 30.0% | |
| ! | TTTTACCGCTTATTAGGAAT+AGG | - | chr5_1:43331626-43331645 | None:intergenic | 30.0% |
| ATGTAACATGATCTTTATGC+AGG | - | chr5_1:43331707-43331726 | None:intergenic | 30.0% | |
| TTGGAGAATACATTTGTATC+AGG | - | chr5_1:43331780-43331799 | None:intergenic | 30.0% | |
| ATATGTGTATGATACACTTG+TGG | - | chr5_1:43332160-43332179 | None:intergenic | 30.0% | |
| ATATGTTATGTGGAGATGAT+TGG | - | chr5_1:43332594-43332613 | None:intergenic | 30.0% | |
| ATGTGAATTGTGAGAATACA+AGG | - | chr5_1:43332753-43332772 | None:intergenic | 30.0% | |
| AGGTTACATAAGCATTTCAT+CGG | + | chr5_1:43332786-43332805 | Msa0731810:intron | 30.0% | |
| CAAAACAAGTTCAAACTTGA+TGG | + | chr5_1:43332886-43332905 | Msa0731810:intron | 30.0% | |
| !! | CTTTTAAAAATGGTGGTGAT+TGG | - | chr5_1:43332914-43332933 | None:intergenic | 30.0% |
| !! | GAACATGATTTGATTTGGTT+TGG | - | chr5_1:43333054-43333073 | None:intergenic | 30.0% |
| TACTGGAACATGATTTGATT+TGG | - | chr5_1:43333059-43333078 | None:intergenic | 30.0% | |
| AAATCAAATCATGTTCCAGT+AGG | + | chr5_1:43333058-43333077 | Msa0731810:intron | 30.0% | |
| !!! | ATTTTTGTTTTCGAGCACTT+GGG | - | chr5_1:43333147-43333166 | None:intergenic | 30.0% |
| AATCAAAAATTGCTGAACTG+GGG | + | chr5_1:43333164-43333183 | Msa0731810:intron | 30.0% | |
| !! | GGGGATTGAAAATTTGATTT+TGG | - | chr5_1:43333366-43333385 | None:intergenic | 30.0% |
| !! | AAGTTCCAGAAAGTGTTTAT+AGG | + | chr5_1:43333400-43333419 | Msa0731810:intron | 30.0% |
| TTTGACCTATAAACACTTTC+TGG | - | chr5_1:43333408-43333427 | None:intergenic | 30.0% | |
| TGTTGTTGAATTGGTACTTT+GGG | - | chr5_1:43333566-43333585 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGAATTGGTACTT+TGG | - | chr5_1:43333567-43333586 | None:intergenic | 30.0% |
| ! | CGAATATGTTGTTGTTGAAT+TGG | - | chr5_1:43333575-43333594 | None:intergenic | 30.0% |
| !! | ATATACTAGCTCTACTCAAT+TGG | + | chr5_1:43334039-43334058 | Msa0731810:intron | 30.0% |
| !! | TATACTAGCTCTACTCAATT+GGG | + | chr5_1:43334040-43334059 | Msa0731810:intron | 30.0% |
| GCTTATTCCTTAAACCTTAA+TGG | + | chr5_1:43334062-43334081 | Msa0731810:intron | 30.0% | |
| ! | TGTTAGAATAGAAATGGGTT+AGG | - | chr5_1:43334089-43334108 | None:intergenic | 30.0% |
| !!! | GTTATTTTAGTGCTTAGTGA+GGG | - | chr5_1:43334214-43334233 | None:intergenic | 30.0% |
| !!! | AGTTATTTTAGTGCTTAGTG+AGG | - | chr5_1:43334215-43334234 | None:intergenic | 30.0% |
| !!! | GAAGGGTATTTTAGTCATTT+TGG | - | chr5_1:43334294-43334313 | None:intergenic | 30.0% |
| !!! | GTTTTTTTAATTTTTGGGGG+TGG | - | chr5_1:43334443-43334462 | None:intergenic | 30.0% |
| !!! | TACAATTTTGTGTCGGTTTT+AGG | + | chr5_1:43334494-43334513 | Msa0731810:intron | 30.0% |
| !!! | TTTATGTCGGTTTTAGGTTT+CGG | + | chr5_1:43334614-43334633 | Msa0731810:intron | 30.0% |
| !!! | TTTATGTCGGTTTTAGGTTT+AGG | + | chr5_1:43334614-43334633 | Msa0731810:intron | 30.0% |
| ! | AATTATAGGTCTATTTTGCG+AGG | + | chr5_1:43334808-43334827 | Msa0731810:intron | 30.0% |
| !! | CCTTTTCTCTAAGAATTAGA+TGG | - | chr5_1:43334910-43334929 | None:intergenic | 30.0% |
| CCATCTAATTCTTAGAGAAA+AGG | + | chr5_1:43334907-43334926 | Msa0731810:intron | 30.0% | |
| AATCCTAAAGTTTAATCGAG+AGG | + | chr5_1:43334938-43334957 | Msa0731810:intron | 30.0% | |
| TTACCTCTCGATTAAACTTT+AGG | - | chr5_1:43334944-43334963 | None:intergenic | 30.0% | |
| ! | AGATAATTTGCAAGTGAATG+AGG | - | chr5_1:43335181-43335200 | None:intergenic | 30.0% |
| TTCTTCTCTATACCTTGATA+TGG | + | chr5_1:43335204-43335223 | Msa0731810:intron | 30.0% | |
| ATTCACTTGAATTGTTAGGA+AGG | - | chr5_1:43335351-43335370 | None:intergenic | 30.0% | |
| AGTGAATCACCAAATCAAAA+TGG | + | chr5_1:43335364-43335383 | Msa0731810:CDS | 30.0% | |
| ! | TGTAACGATTGAAAGTTTTG+AGG | - | chr5_1:43335486-43335505 | None:intergenic | 30.0% |
| TAATTTATTTGCGACTACCA+AGG | - | chr5_1:43335920-43335939 | None:intergenic | 30.0% | |
| AAACCTAGATTTCTGATCTT+AGG | + | chr5_1:43335955-43335974 | Msa0731810:intron | 30.0% | |
| AATCCTAAGATCAGAAATCT+AGG | - | chr5_1:43335961-43335980 | None:intergenic | 30.0% | |
| GTTCAGATTTCAAACATAAG+AGG | + | chr5_1:43336314-43336333 | Msa0731810:CDS | 30.0% | |
| ! | AAGGATCATATCAAAGCATT+TGG | + | chr5_1:43336343-43336362 | Msa0731810:CDS | 30.0% |
| ! | CATATCAAAGCATTTGGATT+TGG | + | chr5_1:43336349-43336368 | Msa0731810:CDS | 30.0% |
| CTGTAAAATTCTGACTCATG+AGG | - | chr5_1:43330685-43330704 | None:intergenic | 35.0% | |
| CGAATTTGCACAAGACTTTA+TGG | - | chr5_1:43330734-43330753 | None:intergenic | 35.0% | |
| GAAAGAAATTGTGTGATAGG+TGG | - | chr5_1:43330944-43330963 | None:intergenic | 35.0% | |
| AATAGAACATGGAAAAGTGG+AGG | - | chr5_1:43330970-43330989 | None:intergenic | 35.0% | |
| ! | TAAAAGGAAGTACAAAGCTG+GGG | + | chr5_1:43331099-43331118 | Msa0731810:intron | 35.0% |
| ! | GATTTTATGTATCACCCGTT+AGG | - | chr5_1:43331160-43331179 | None:intergenic | 35.0% |
| ACTATAAACAACACTTCCAC+GGG | + | chr5_1:43331206-43331225 | Msa0731810:intron | 35.0% | |
| !!! | CTATTTTTTTAGGGAGTTGC+TGG | - | chr5_1:43331356-43331375 | None:intergenic | 35.0% |
| !!! | GCTGGCTTGCTATTTTTTTA+GGG | - | chr5_1:43331365-43331384 | None:intergenic | 35.0% |
| !!! | TTTTTGGGTATAAACAGTGG+CGG | + | chr5_1:43331562-43331581 | Msa0731810:intron | 35.0% |
| AACACCCTATTCCTAATAAG+CGG | + | chr5_1:43331618-43331637 | Msa0731810:intron | 35.0% | |
| CATGTTACATAACATAGCAG+CGG | + | chr5_1:43331717-43331736 | Msa0731810:intron | 35.0% | |
| TCATGCAAGTGTCTAGATTA+GGG | - | chr5_1:43331882-43331901 | None:intergenic | 35.0% | |
| TTCATGCAAGTGTCTAGATT+AGG | - | chr5_1:43331883-43331902 | None:intergenic | 35.0% | |
| TAGACACTTGCATGAAAAAG+AGG | + | chr5_1:43331887-43331906 | Msa0731810:intron | 35.0% | |
| ATTAACAAGGACTTTGCAGA+TGG | + | chr5_1:43332033-43332052 | Msa0731810:intron | 35.0% | |
| GCAGATGGAAGATATAATCA+AGG | + | chr5_1:43332048-43332067 | Msa0731810:intron | 35.0% | |
| ! | AATTGTTGATTGACAAGGTG+AGG | - | chr5_1:43332188-43332207 | None:intergenic | 35.0% |
| AGAGACATTGCATAAACTGT+TGG | - | chr5_1:43332281-43332300 | None:intergenic | 35.0% | |
| !! | CGATGTTTTTGTTGCATCAA+AGG | - | chr5_1:43332350-43332369 | None:intergenic | 35.0% |
| ! | GTGGATTTTATATCCAATGG+AGG | - | chr5_1:43332379-43332398 | None:intergenic | 35.0% |
| !!! | GTGGTGGATTTTATATCCAA+TGG | - | chr5_1:43332382-43332401 | None:intergenic | 35.0% |
| !! | TACAAGTATTGGTGATTGTG+AGG | - | chr5_1:43332472-43332491 | None:intergenic | 35.0% |
| !! | TGTTGTGTGATTTTTGGATG+TGG | - | chr5_1:43332547-43332566 | None:intergenic | 35.0% |
| ATTGTGAGAATACAAGGCAT+AGG | - | chr5_1:43332747-43332766 | None:intergenic | 35.0% | |
| TCTAATCCCACTTCAATTTC+CGG | + | chr5_1:43332954-43332973 | Msa0731810:intron | 35.0% | |
| ! | TTTTCTCCGGAAATTGAAGT+GGG | - | chr5_1:43332963-43332982 | None:intergenic | 35.0% |
| ACTTCAATTTCCGGAGAAAA+CGG | + | chr5_1:43332963-43332982 | Msa0731810:intron | 35.0% | |
| TCATGTTCCAGTAGGATTAA+AGG | + | chr5_1:43333066-43333085 | Msa0731810:intron | 35.0% | |
| GTTTATGCCTTTAATCCTAC+TGG | - | chr5_1:43333076-43333095 | None:intergenic | 35.0% | |
| ! | AGGATTAAAGGCATAAACAG+AGG | + | chr5_1:43333078-43333097 | Msa0731810:intron | 35.0% |
| !!! | ACATTTTGGAAGTATCGGAT+TGG | + | chr5_1:43333119-43333138 | Msa0731810:intron | 35.0% |
| !!! | TTTTTGTTTTCGAGCACTTG+GGG | - | chr5_1:43333146-43333165 | None:intergenic | 35.0% |
| !!! | GATTTTTGTTTTCGAGCACT+TGG | - | chr5_1:43333148-43333167 | None:intergenic | 35.0% |
| !!! | AACTTGTTTTGGTGATTTGG+GGG | - | chr5_1:43333385-43333404 | None:intergenic | 35.0% |
| !!! | GAACTTGTTTTGGTGATTTG+GGG | - | chr5_1:43333386-43333405 | None:intergenic | 35.0% |
| !!! | GGAACTTGTTTTGGTGATTT+GGG | - | chr5_1:43333387-43333406 | None:intergenic | 35.0% |
| !!! | TGGAACTTGTTTTGGTGATT+TGG | - | chr5_1:43333388-43333407 | None:intergenic | 35.0% |
| !!! | ACACTTTCTGGAACTTGTTT+TGG | - | chr5_1:43333396-43333415 | None:intergenic | 35.0% |
| GCACGAATTTGACAACAATT+AGG | + | chr5_1:43333777-43333796 | Msa0731810:intron | 35.0% | |
| TTTGAGAAGAGAAGAGAAAG+AGG | - | chr5_1:43333970-43333989 | None:intergenic | 35.0% | |
| ! | CTCTAGTTGTTGGTAAAACT+AGG | - | chr5_1:43334016-43334035 | None:intergenic | 35.0% |
| ACGGTAAAATACAACGCTAA+CGG | + | chr5_1:43334132-43334151 | Msa0731810:intron | 35.0% | |
| !! | TGGCATTTTGGTCATTTTGA+GGG | - | chr5_1:43334265-43334284 | None:intergenic | 35.0% |
| !! | TTTAGTCATTTTGGACTTGG+TGG | - | chr5_1:43334285-43334304 | None:intergenic | 35.0% |
| !!! | CTCTGTGTGTATTTTTGGTT+GGG | - | chr5_1:43334337-43334356 | None:intergenic | 35.0% |
| ! | TTTGCCTCTGTGTGTATTTT+TGG | - | chr5_1:43334342-43334361 | None:intergenic | 35.0% |
| !!! | TTTGTGTCGGTTTTAGGTTT+CGG | + | chr5_1:43334500-43334519 | Msa0731810:intron | 35.0% |
| GGAGCTAGAAAAAAAAGCTA+GGG | - | chr5_1:43334872-43334891 | None:intergenic | 35.0% | |
| ATTAGATGGTTTATACCCAG+TGG | - | chr5_1:43334896-43334915 | None:intergenic | 35.0% | |
| TGACCAAATATTGTTTCCGA+CGG | + | chr5_1:43334972-43334991 | Msa0731810:intron | 35.0% | |
| GTCAAGTGGATGAAATTAAG+TGG | - | chr5_1:43335032-43335051 | None:intergenic | 35.0% | |
| TAAAGGAAATGCAATGGATG+TGG | + | chr5_1:43335102-43335121 | Msa0731810:intron | 35.0% | |
| AAAGGAAATGCAATGGATGT+GGG | + | chr5_1:43335103-43335122 | Msa0731810:intron | 35.0% | |
| !! | GATCGTTTTGATCCATATCA+AGG | - | chr5_1:43335219-43335238 | None:intergenic | 35.0% |
| ATCATGTTTCAATCAAGCTG+AGG | + | chr5_1:43335300-43335319 | Msa0731810:CDS | 35.0% | |
| GGTGATTCACTTGAATTGTT+AGG | - | chr5_1:43335355-43335374 | None:intergenic | 35.0% | |
| GTTGGTATCCAGTAATTGTT+AGG | - | chr5_1:43335415-43335434 | None:intergenic | 35.0% | |
| ATGAGAATCTGTTCTTGAGT+TGG | - | chr5_1:43335433-43335452 | None:intergenic | 35.0% | |
| ACTCAAGAACAGATTCTCAT+TGG | + | chr5_1:43335433-43335452 | Msa0731810:CDS | 35.0% | |
| AAGAAAACTACTACACCTGA+AGG | - | chr5_1:43335513-43335532 | None:intergenic | 35.0% | |
| CATACAATCCTTGTCAAATC+TGG | + | chr5_1:43335721-43335740 | Msa0731810:intron | 35.0% | |
| TTCATTGACCAGATTTGACA+AGG | - | chr5_1:43335732-43335751 | None:intergenic | 35.0% | |
| ! | ATTGAAGTTCCTAGGGTTTT+AGG | + | chr5_1:43335758-43335777 | Msa0731810:intron | 35.0% |
| ! | TTTGGTGATAGATGCATATG+TGG | + | chr5_1:43336008-43336027 | Msa0731810:intron | 35.0% |
| ! | TTGGTGATAGATGCATATGT+GGG | + | chr5_1:43336009-43336028 | Msa0731810:intron | 35.0% |
| TTGAACAACAATAGCATGGT+AGG | - | chr5_1:43336102-43336121 | None:intergenic | 35.0% | |
| ! | ACCATGCTATTGTTGTTCAA+AGG | + | chr5_1:43336102-43336121 | Msa0731810:CDS | 35.0% |
| ! | CCATGCTATTGTTGTTCAAA+GGG | + | chr5_1:43336103-43336122 | Msa0731810:CDS | 35.0% |
| AGAACTCATGAGAAAAACTG+TGG | + | chr5_1:43336268-43336287 | Msa0731810:CDS | 35.0% | |
| CAAACATAAGAGGTCACTTA+AGG | + | chr5_1:43336324-43336343 | Msa0731810:CDS | 35.0% | |
| CACCAGATGAAGAAGAAAAA+GGG | - | chr5_1:43336381-43336400 | None:intergenic | 35.0% | |
| ! | CTTTTTCTTCTTCATCTGGT+GGG | + | chr5_1:43336380-43336399 | Msa0731810:CDS | 35.0% |
| ! | AAAAGGAAGTACAAAGCTGG+GGG | + | chr5_1:43331100-43331119 | Msa0731810:intron | 40.0% |
| GACTTGGATCGTTTATGTGT+TGG | - | chr5_1:43331334-43331353 | None:intergenic | 40.0% | |
| !!! | GGCTGGCTTGCTATTTTTTT+AGG | - | chr5_1:43331366-43331385 | None:intergenic | 40.0% |
| AATAGCAAGCCAGCCTTAAA+CGG | + | chr5_1:43331371-43331390 | Msa0731810:intron | 40.0% | |
| !! | TGATTGGATTTTGGCACGAA+AGG | - | chr5_1:43331397-43331416 | None:intergenic | 40.0% |
| AAAAGAGGAACTCCATTCCT+CGG | + | chr5_1:43331902-43331921 | Msa0731810:intron | 40.0% | |
| TACACTTGTGGACATGAACT+TGG | - | chr5_1:43332148-43332167 | None:intergenic | 40.0% | |
| GACATTGCATAAACTGTTGG+TGG | - | chr5_1:43332278-43332297 | None:intergenic | 40.0% | |
| TAGACTCATCTAGATGCATG+TGG | + | chr5_1:43332300-43332319 | Msa0731810:intron | 40.0% | |
| AACATCGTAATCACCTCCAT+TGG | + | chr5_1:43332363-43332382 | Msa0731810:intron | 40.0% | |
| GTTCATGCATACATGACTGA+TGG | - | chr5_1:43332404-43332423 | None:intergenic | 40.0% | |
| !! | GTGTGATTTTTGGATGTGGT+TGG | - | chr5_1:43332543-43332562 | None:intergenic | 40.0% |
| ! | GGCAATGGAACTTGTTTACT+TGG | - | chr5_1:43332726-43332745 | None:intergenic | 40.0% |
| AGAATACAAGGCATAGGCAA+TGG | - | chr5_1:43332741-43332760 | None:intergenic | 40.0% | |
| TTCACATATGTGTGCAGTAG+AGG | + | chr5_1:43332766-43332785 | Msa0731810:intron | 40.0% | |
| ! | GTTTTCTCCGGAAATTGAAG+TGG | - | chr5_1:43332964-43332983 | None:intergenic | 40.0% |
| CTTCAATTTCCGGAGAAAAC+GGG | + | chr5_1:43332964-43332983 | Msa0731810:intron | 40.0% | |
| ! | TTCCAAAAACCCGTTTTCTC+CGG | - | chr5_1:43332976-43332995 | None:intergenic | 40.0% |
| AGATTCCCAGAACTCAGTTA+CGG | + | chr5_1:43333321-43333340 | Msa0731810:intron | 40.0% | |
| GGTACTTTGGGTATCAAGAT+TGG | - | chr5_1:43333554-43333573 | None:intergenic | 40.0% | |
| !! | TTAGAGATTCTTGGTGCTAG+AGG | - | chr5_1:43333877-43333896 | None:intergenic | 40.0% |
| ! | AAGCTTGGGTTAGAGATTCT+TGG | - | chr5_1:43333886-43333905 | None:intergenic | 40.0% |
| TAGGAGCTCAATTGAAGCTT+GGG | - | chr5_1:43333900-43333919 | None:intergenic | 40.0% | |
| GAAGAGAGGATTCATCATCT+AGG | - | chr5_1:43333919-43333938 | None:intergenic | 40.0% | |
| GTTAGGCCCATTAAGGTTTA+AGG | - | chr5_1:43334072-43334091 | None:intergenic | 40.0% | |
| !! | GTGGCATTTTGGTCATTTTG+AGG | - | chr5_1:43334266-43334285 | None:intergenic | 40.0% |
| !!! | TTTTGGACTTGGTGGCATTT+TGG | - | chr5_1:43334277-43334296 | None:intergenic | 40.0% |
| TGGTTGGGAATCGTAGAATT+CGG | - | chr5_1:43334322-43334341 | None:intergenic | 40.0% | |
| !!! | CCTCTGTGTGTATTTTTGGT+TGG | - | chr5_1:43334338-43334357 | None:intergenic | 40.0% |
| CCAACCAAAAATACACACAG+AGG | + | chr5_1:43334335-43334354 | Msa0731810:intron | 40.0% | |
| TACATCACTTTGCGGGAATT+TGG | - | chr5_1:43334531-43334550 | None:intergenic | 40.0% | |
| TACATCACTTTGCGGGAATT+TGG | - | chr5_1:43334531-43334550 | None:intergenic | 40.0% | |
| TACATCACTTTGCGGGAATT+TGG | - | chr5_1:43334531-43334550 | None:intergenic | 40.0% | |
| CGGAGCTAGAAAAAAAAGCT+AGG | - | chr5_1:43334873-43334892 | None:intergenic | 40.0% | |
| GACCAAATATTGTTTCCGAC+GGG | + | chr5_1:43334973-43334992 | Msa0731810:intron | 40.0% | |
| ATTTGCAAGTGAATGAGGCA+GGG | - | chr5_1:43335176-43335195 | None:intergenic | 40.0% | |
| AATTTGCAAGTGAATGAGGC+AGG | - | chr5_1:43335177-43335196 | None:intergenic | 40.0% | |
| AAGCTACTTAGCAAAGGTAG+AGG | - | chr5_1:43335247-43335266 | None:intergenic | 40.0% | |
| ! | CATTTTGTGGAGTTGAACCT+AGG | - | chr5_1:43335270-43335289 | None:intergenic | 40.0% |
| GTTAGGAAGGCCTATTTGTA+AGG | - | chr5_1:43335338-43335357 | None:intergenic | 40.0% | |
| !!! | TGAAAGTTTTGAGGCAGACT+GGG | - | chr5_1:43335477-43335496 | None:intergenic | 40.0% |
| !!! | TTGAAAGTTTTGAGGCAGAC+TGG | - | chr5_1:43335478-43335497 | None:intergenic | 40.0% |
| CAATCGTTACAACAACCTTC+AGG | + | chr5_1:43335495-43335514 | Msa0731810:CDS | 40.0% | |
| CTGTTATGTCCTAAAACCCT+AGG | - | chr5_1:43335770-43335789 | None:intergenic | 40.0% | |
| TGGTGATAGATGCATATGTG+GGG | + | chr5_1:43336010-43336029 | Msa0731810:intron | 40.0% | |
| TAGCATGGTAGGTCTAACAA+TGG | - | chr5_1:43336091-43336110 | None:intergenic | 40.0% | |
| CCCTTTGAACAACAATAGCA+TGG | - | chr5_1:43336106-43336125 | None:intergenic | 40.0% | |
| CTAAGCCATTGAAGGATTTC+AGG | + | chr5_1:43336155-43336174 | Msa0731810:CDS | 40.0% | |
| AGTGTCCTGAAATCCTTCAA+TGG | - | chr5_1:43336163-43336182 | None:intergenic | 40.0% | |
| ACACATTACAAGAGGAAGCA+TGG | + | chr5_1:43336187-43336206 | Msa0731810:CDS | 40.0% | |
| ACGTTTACTTGCCGAAAATG+TGG | + | chr5_1:43336217-43336236 | Msa0731810:CDS | 40.0% | |
| CGTTTACTTGCCGAAAATGT+GGG | + | chr5_1:43336218-43336237 | Msa0731810:CDS | 40.0% | |
| ! | AGCCCTTTTTCTTCTTCATC+TGG | + | chr5_1:43336376-43336395 | Msa0731810:CDS | 40.0% |
| CCACCAGATGAAGAAGAAAA+AGG | - | chr5_1:43336382-43336401 | None:intergenic | 40.0% | |
| ! | CCTTTTTCTTCTTCATCTGG+TGG | + | chr5_1:43336379-43336398 | Msa0731810:CDS | 40.0% |
| GTATTGAAGCCGTTGAGGTT+CGG | + | chr5_1:43330538-43330557 | Msa0731810:intron | 45.0% | |
| TATTGAAGCCGTTGAGGTTC+GGG | + | chr5_1:43330539-43330558 | Msa0731810:intron | 45.0% | |
| GAAATTGTGTGATAGGTGGC+CGG | - | chr5_1:43330940-43330959 | None:intergenic | 45.0% | |
| GGTTTGAGCTTGTGGTTACT+GGG | - | chr5_1:43331138-43331157 | None:intergenic | 45.0% | |
| ACCACAAGCTCAAACCCTAA+CGG | + | chr5_1:43331142-43331161 | Msa0731810:intron | 45.0% | |
| ACGGTTTCGAATCCATACGT+GGG | - | chr5_1:43331244-43331263 | None:intergenic | 45.0% | |
| TACGGTTTCGAATCCATACG+TGG | - | chr5_1:43331245-43331264 | None:intergenic | 45.0% | |
| !! | TTTTAGGGAGTTGCTGGACT+TGG | - | chr5_1:43331350-43331369 | None:intergenic | 45.0% |
| ! | CTAGATTAGGGCTCTGATCT+AGG | - | chr5_1:43331870-43331889 | None:intergenic | 45.0% |
| TTACCACCTACCTTTCCGTA+TGG | - | chr5_1:43331972-43331991 | None:intergenic | 45.0% | |
| GATGTAATGCTAACCCTCAG+TGG | - | chr5_1:43331996-43332015 | None:intergenic | 45.0% | |
| TGTGGTACCAAAACACCTCA+AGG | + | chr5_1:43332318-43332337 | Msa0731810:intron | 45.0% | |
| CATGCATACATGACTGATGG+TGG | - | chr5_1:43332401-43332420 | None:intergenic | 45.0% | |
| !! | TTCCGGAGAAAACGGGTTTT+TGG | + | chr5_1:43332971-43332990 | Msa0731810:intron | 45.0% |
| AAAATTGCTGAACTGGGGCT+AGG | + | chr5_1:43333169-43333188 | Msa0731810:intron | 45.0% | |
| !! | GAGTTCTGGGAATCTGATGT+AGG | - | chr5_1:43333316-43333335 | None:intergenic | 45.0% |
| GATTCCCAGAACTCAGTTAC+GGG | + | chr5_1:43333322-43333341 | Msa0731810:intron | 45.0% | |
| AGAACCCGTAACTGAGTTCT+GGG | - | chr5_1:43333329-43333348 | None:intergenic | 45.0% | |
| TAGAACCCGTAACTGAGTTC+TGG | - | chr5_1:43333330-43333349 | None:intergenic | 45.0% | |
| !! | TCTTGGTGCTAGAGGTAAGA+GGG | - | chr5_1:43333869-43333888 | None:intergenic | 45.0% |
| !! | TTCTTGGTGCTAGAGGTAAG+AGG | - | chr5_1:43333870-43333889 | None:intergenic | 45.0% |
| CTAGGAGCTCAATTGAAGCT+TGG | - | chr5_1:43333901-43333920 | None:intergenic | 45.0% | |
| AAGGGTTAGAGCTTGAAGAG+AGG | - | chr5_1:43333933-43333952 | None:intergenic | 45.0% | |
| GAGAAGAGAAAGAGGCTAGA+GGG | - | chr5_1:43333962-43333981 | None:intergenic | 45.0% | |
| AGAGAAGAGAAAGAGGCTAG+AGG | - | chr5_1:43333963-43333982 | None:intergenic | 45.0% | |
| !! | GAAATGGGTTAGGCCCATTA+AGG | - | chr5_1:43334079-43334098 | None:intergenic | 45.0% |
| CAACGCTAACGGTCACTTAA+CGG | + | chr5_1:43334143-43334162 | Msa0731810:intron | 45.0% | |
| !! | TTTGGTCATTTTGAGGGCAG+TGG | - | chr5_1:43334259-43334278 | None:intergenic | 45.0% |
| !! | CGTAGAATTCGGTGTGAGAA+GGG | - | chr5_1:43334311-43334330 | None:intergenic | 45.0% |
| !! | TCGTAGAATTCGGTGTGAGA+AGG | - | chr5_1:43334312-43334331 | None:intergenic | 45.0% |
| CGAAAATCGGGCTGTTACAA+CGG | + | chr5_1:43334416-43334435 | Msa0731810:intron | 45.0% | |
| ATTCCCGCAAAGTGATGTAG+TGG | + | chr5_1:43334532-43334551 | Msa0731810:intron | 45.0% | |
| !!! | ATGTCGGTTTTAGGTTTCGG+TGG | + | chr5_1:43334617-43334636 | Msa0731810:intron | 45.0% |
| ATTCCCGCAAAGTGATGTAG+TGG | + | chr5_1:43334532-43334551 | Msa0731810:intron | 45.0% | |
| TGGACCACTACATCACTTTG+CGG | - | chr5_1:43334653-43334672 | None:intergenic | 45.0% | |
| ATTCCCGCAAAGTGATGTAG+TGG | + | chr5_1:43334532-43334551 | Msa0731810:intron | 45.0% | |
| TGGACCACTACATCACTTTG+CGG | - | chr5_1:43334653-43334672 | None:intergenic | 45.0% | |
| !!! | TTTTTTTCTAGCTCCGCCAC+TGG | + | chr5_1:43334877-43334896 | Msa0731810:intron | 45.0% |
| !!! | TTTTTTCTAGCTCCGCCACT+GGG | + | chr5_1:43334878-43334897 | Msa0731810:intron | 45.0% |
| AGATGGTTTATACCCAGTGG+CGG | - | chr5_1:43334893-43334912 | None:intergenic | 45.0% | |
| CCTAGGAAGCTACTTAGCAA+AGG | - | chr5_1:43335253-43335272 | None:intergenic | 45.0% | |
| CCTTTGCTAAGTAGCTTCCT+AGG | + | chr5_1:43335250-43335269 | Msa0731810:intron | 45.0% | |
| ! | GTCACAGTGGCCTTACAAAT+AGG | + | chr5_1:43335325-43335344 | Msa0731810:CDS | 45.0% |
| GAACGCAATCGAGGTTTCAT+CGG | + | chr5_1:43335817-43335836 | Msa0731810:intron | 45.0% | |
| ATTGATTGCCATAAGGGTCG+TGG | - | chr5_1:43335889-43335908 | None:intergenic | 45.0% | |
| GGTGATAGATGCATATGTGG+GGG | + | chr5_1:43336011-43336030 | Msa0731810:intron | 45.0% | |
| ! | CATGGTTCACAGTATCGAAG+AGG | + | chr5_1:43336034-43336053 | Msa0731810:CDS | 45.0% |
| !! | TGGGTTCTTTTTAGCGAGTC+TGG | - | chr5_1:43336061-43336080 | None:intergenic | 45.0% |
| GTCTAACAATGGTCGTGGAT+GGG | - | chr5_1:43336080-43336099 | None:intergenic | 45.0% | |
| TCCAAGAGCTAAGCCATTGA+AGG | + | chr5_1:43336147-43336166 | Msa0731810:CDS | 45.0% | |
| ! | TCCTTCAATGGCTTAGCTCT+TGG | - | chr5_1:43336151-43336170 | None:intergenic | 45.0% |
| CACTGCAGACACATTACAAG+AGG | + | chr5_1:43336179-43336198 | Msa0731810:CDS | 45.0% | |
| ! | CCAATGGCTTCCCACATTTT+CGG | - | chr5_1:43336231-43336250 | None:intergenic | 45.0% |
| CAATCACCTTTCACTGCCAA+TGG | - | chr5_1:43336247-43336266 | None:intergenic | 45.0% | |
| CATTGGCAGTGAAAGGTGAT+TGG | + | chr5_1:43336245-43336264 | Msa0731810:CDS | 45.0% | |
| AGAAAAACTGTGGCAAGCGT+TGG | + | chr5_1:43336278-43336297 | Msa0731810:CDS | 45.0% | |
| !! | AAGCGTTGGCTTTGTATCTG+TGG | + | chr5_1:43336292-43336311 | Msa0731810:CDS | 45.0% |
| !! | AAAAATTCAAATAAAATAAA+AGG | + | chr5_1:43331083-43331102 | Msa0731810:intron | 5.0% |
| !!! | TTTTTTTTATTTTTATGATA+CGG | - | chr5_1:43331263-43331282 | None:intergenic | 5.0% |
| !!! | ATCATTTATATATTTTTTTA+AGG | - | chr5_1:43331535-43331554 | None:intergenic | 5.0% |
| !!! | ATTGAATTATTTAAATTTTT+CGG | - | chr5_1:43334563-43334582 | None:intergenic | 5.0% |
| !!! | ATTGAATTATTTAAATTTTT+CGG | - | chr5_1:43334563-43334582 | None:intergenic | 5.0% |
| !! | AATTTAAATAATTCAATTAT+AGG | + | chr5_1:43334566-43334585 | Msa0731810:intron | 5.0% |
| !!! | TTAAGAAATTAATTTTATTT+CGG | - | chr5_1:43335073-43335092 | None:intergenic | 5.0% |
| !!! | TTTCTTAAAAATAATTTTAA+AGG | + | chr5_1:43335085-43335104 | Msa0731810:intron | 5.0% |
| CAACGGCTTCAATACTGCAG+TGG | - | chr5_1:43330533-43330552 | None:intergenic | 50.0% | |
| ! | CTGCAGTATTGAAGCCGTTG+AGG | + | chr5_1:43330533-43330552 | Msa0731810:intron | 50.0% |
| GGGTTTGAGCTTGTGGTTAC+TGG | - | chr5_1:43331139-43331158 | None:intergenic | 50.0% | |
| CCACAAGCTCAAACCCTAAC+GGG | + | chr5_1:43331143-43331162 | Msa0731810:intron | 50.0% | |
| TTGGCACGAAAGGCCGTTTA+AGG | - | chr5_1:43331387-43331406 | None:intergenic | 50.0% | |
| ! | CGCGCGTTTTACCGCTTATT+AGG | - | chr5_1:43331632-43331651 | None:intergenic | 50.0% |
| ! | TGCTTGTTGATGCCGAGGAA+TGG | - | chr5_1:43331917-43331936 | None:intergenic | 50.0% |
| ! | GTTGTTGCTTGTTGATGCCG+AGG | - | chr5_1:43331922-43331941 | None:intergenic | 50.0% |
| ACTCCATCTACCCGTCCATA+CGG | + | chr5_1:43331954-43331973 | Msa0731810:intron | 50.0% | |
| TTTCCGTATGGACGGGTAGA+TGG | - | chr5_1:43331960-43331979 | None:intergenic | 50.0% | |
| ATCTACCCGTCCATACGGAA+AGG | + | chr5_1:43331959-43331978 | Msa0731810:intron | 50.0% | |
| ACCTACCTTTCCGTATGGAC+GGG | - | chr5_1:43331967-43331986 | None:intergenic | 50.0% | |
| CACCTACCTTTCCGTATGGA+CGG | - | chr5_1:43331968-43331987 | None:intergenic | 50.0% | |
| AGGTAGGTGGTAAACCACTG+AGG | + | chr5_1:43331979-43331998 | Msa0731810:intron | 50.0% | |
| GGTAGGTGGTAAACCACTGA+GGG | + | chr5_1:43331980-43331999 | Msa0731810:intron | 50.0% | |
| !! | GTGACGACCTTGAGGTGTTT+TGG | - | chr5_1:43332328-43332347 | None:intergenic | 50.0% |
| CATCAAAGGTGACGACCTTG+AGG | - | chr5_1:43332336-43332355 | None:intergenic | 50.0% | |
| !! | GCATACATGACTGATGGTGG+TGG | - | chr5_1:43332398-43332417 | None:intergenic | 50.0% |
| !! | GTTCCAGGAGTTCTGGAACT+AGG | - | chr5_1:43333226-43333245 | None:intergenic | 50.0% |
| ! | TCCTGGAACAGCACGCTTTT+GGG | + | chr5_1:43333237-43333256 | Msa0731810:intron | 50.0% |
| GTGCTAGAGGTAAGAGGGTT+AGG | - | chr5_1:43333864-43333883 | None:intergenic | 50.0% | |
| GAGGCTAGAGGGAAGAACAA+GGG | - | chr5_1:43333951-43333970 | None:intergenic | 50.0% | |
| AGAGGCTAGAGGGAAGAACA+AGG | - | chr5_1:43333952-43333971 | None:intergenic | 50.0% | |
| TGGGCCACTACATCACTTTG+CGG | - | chr5_1:43334539-43334558 | None:intergenic | 50.0% | |
| GGACCACTACATCACTTTGC+GGG | - | chr5_1:43334652-43334671 | None:intergenic | 50.0% | |
| GGACCACTACATCACTTTGC+GGG | - | chr5_1:43334652-43334671 | None:intergenic | 50.0% | |
| GGCCCGTCGGAAACAATATT+TGG | - | chr5_1:43334978-43334997 | None:intergenic | 50.0% | |
| TCAAGCTGAGGATGTCACAG+TGG | + | chr5_1:43335312-43335331 | Msa0731810:CDS | 50.0% | |
| TTGCAACACGAACGCAATCG+AGG | + | chr5_1:43335808-43335827 | Msa0731810:intron | 50.0% | |
| TGATCCTACCACGACCCTTA+TGG | + | chr5_1:43335878-43335897 | Msa0731810:intron | 50.0% | |
| ATTGCCATAAGGGTCGTGGT+AGG | - | chr5_1:43335885-43335904 | None:intergenic | 50.0% | |
| TAGATGCATATGTGGGGGCA+TGG | + | chr5_1:43336016-43336035 | Msa0731810:intron | 50.0% | |
| GGTCTAACAATGGTCGTGGA+TGG | - | chr5_1:43336081-43336100 | None:intergenic | 50.0% | |
| GGTAGGTCTAACAATGGTCG+TGG | - | chr5_1:43336085-43336104 | None:intergenic | 50.0% | |
| CCGAAAATGTGGGAAGCCAT+TGG | + | chr5_1:43336228-43336247 | Msa0731810:CDS | 50.0% | |
| TGATGCTGCCCGAACCTCAA+CGG | - | chr5_1:43330550-43330569 | None:intergenic | 55.0% | |
| CCCGTTAGGGTTTGAGCTTG+TGG | - | chr5_1:43331146-43331165 | None:intergenic | 55.0% | |
| CAATCCAGCGAACCCACGTA+TGG | + | chr5_1:43331229-43331248 | Msa0731810:intron | 55.0% | |
| GAATCCATACGTGGGTTCGC+TGG | - | chr5_1:43331236-43331255 | None:intergenic | 55.0% | |
| ! | CACGAAAGGCCGTTTAAGGC+TGG | - | chr5_1:43331383-43331402 | None:intergenic | 55.0% |
| ! | AGCCCTTCATGGGTTGAGGT+GGG | + | chr5_1:43331585-43331604 | Msa0731810:intron | 55.0% |
| ! | GGAATAGGGTGTTACAGCCG+TGG | - | chr5_1:43331611-43331630 | None:intergenic | 55.0% |
| ACCCGTCCATACGGAAAGGT+AGG | + | chr5_1:43331963-43331982 | Msa0731810:intron | 55.0% | |
| CGTCCATACGGAAAGGTAGG+TGG | + | chr5_1:43331966-43331985 | Msa0731810:intron | 55.0% | |
| TAGGACGCTAAAGCGTGCAG+AGG | - | chr5_1:43333207-43333226 | None:intergenic | 55.0% | |
| CGTCCTAGTTCCAGAACTCC+TGG | + | chr5_1:43333220-43333239 | Msa0731810:intron | 55.0% | |
| ! | CTCCTGGAACAGCACGCTTT+TGG | + | chr5_1:43333236-43333255 | Msa0731810:intron | 55.0% |
| ! | TCCCAAAAGCGTGCTGTTCC+AGG | - | chr5_1:43333241-43333260 | None:intergenic | 55.0% |
| GACGCTTCTGGTACGCTGAT+GGG | + | chr5_1:43333259-43333278 | Msa0731810:intron | 55.0% | |
| TAGGACGCTTTCGCGTGCTT+AGG | - | chr5_1:43333297-43333316 | None:intergenic | 55.0% | |
| GGGCCACTACATCACTTTGC+GGG | - | chr5_1:43334538-43334557 | None:intergenic | 55.0% | |
| GCAATGGATGTGGGATCCCT+TGG | + | chr5_1:43335112-43335131 | Msa0731810:intron | 55.0% | |
| GGGAAGCCATTGGCAGTGAA+AGG | + | chr5_1:43336238-43336257 | Msa0731810:CDS | 55.0% | |
| ! | AACAGTGGCGGAGCCCTTCA+TGG | + | chr5_1:43331574-43331593 | Msa0731810:intron | 60.0% |
| ! | ACAGTGGCGGAGCCCTTCAT+GGG | + | chr5_1:43331575-43331594 | Msa0731810:intron | 60.0% |
| ! | GAGCCCTTCATGGGTTGAGG+TGG | + | chr5_1:43331584-43331603 | Msa0731810:intron | 60.0% |
| GGCCCACCTCAACCCATGAA+GGG | - | chr5_1:43331590-43331609 | None:intergenic | 60.0% | |
| TGGCCCACCTCAACCCATGA+AGG | - | chr5_1:43331591-43331610 | None:intergenic | 60.0% | |
| ! | TCATGGGTTGAGGTGGGCCA+CGG | + | chr5_1:43331591-43331610 | Msa0731810:intron | 60.0% |
| TGGACGGGTAGATGGAGTGC+AGG | - | chr5_1:43331952-43331971 | None:intergenic | 60.0% | |
| ! | GCGTGCTGTTCCAGGAGTTC+TGG | - | chr5_1:43333233-43333252 | None:intergenic | 60.0% |
| !!! | GCACGCTTTTGGGACGCTTC+TGG | + | chr5_1:43333247-43333266 | Msa0731810:intron | 60.0% |
| GGACGCTTCTGGTACGCTGA+TGG | + | chr5_1:43333258-43333277 | Msa0731810:intron | 60.0% | |
| GGATCAATTGCTCGGCCCGT+CGG | - | chr5_1:43334991-43335010 | None:intergenic | 60.0% | |
| TGGGTTCGCTGGATTGCCCG+TGG | - | chr5_1:43331225-43331244 | None:intergenic | 65.0% | |
| ! | GCGGAGCCCTTCATGGGTTG+AGG | + | chr5_1:43331581-43331600 | Msa0731810:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 43330412 | 43336408 | 43330412 | ID=Msa0731810;Name=Msa0731810 |
| chr5_1 | mRNA | 43330412 | 43336408 | 43330412 | ID=Msa0731810-mRNA-1;Parent=Msa0731810;Name=Msa0731810-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.66|0.5|0.33|3|0|212 |
| chr5_1 | exon | 43330412 | 43330415 | 43330412 | ID=Msa0731810-mRNA-1:exon:12368;Parent=Msa0731810-mRNA-1 |
| chr5_1 | exon | 43335272 | 43335516 | 43335272 | ID=Msa0731810-mRNA-1:exon:12369;Parent=Msa0731810-mRNA-1 |
| chr5_1 | exon | 43336019 | 43336408 | 43336019 | ID=Msa0731810-mRNA-1:exon:12370;Parent=Msa0731810-mRNA-1 |
| chr5_1 | CDS | 43330412 | 43330415 | 43330412 | ID=Msa0731810-mRNA-1:cds;Parent=Msa0731810-mRNA-1 |
| chr5_1 | CDS | 43335272 | 43335516 | 43335272 | ID=Msa0731810-mRNA-1:cds;Parent=Msa0731810-mRNA-1 |
| chr5_1 | CDS | 43336019 | 43336408 | 43336019 | ID=Msa0731810-mRNA-1:cds;Parent=Msa0731810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
