AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0732250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0732250 MtrunA17_Chr5g0426961 85.850 841 83 7 1 809 1 837 0.0 1389
Msa0732250 MtrunA17_Chr1g0211711 75.695 683 145 5 143 808 374 1052 0.0 1072
Msa0732250 MtrunA17_Chr1g0183311 71.589 711 155 4 143 808 175 883 0.0 1014
Msa0732250 MtrunA17_Chr1g0211661 68.740 611 184 2 143 747 256 865 0.0 860
Msa0732250 MtrunA17_Chr5g0420361 64.055 651 191 8 183 797 145 788 0.0 834
Msa0732250 MtrunA17_Chr1g0211691 69.618 576 149 7 143 695 373 945 0.0 797
Msa0732250 MtrunA17_Chr6g0472441 60.703 654 188 11 183 797 87 710 0.0 763
Msa0732250 MtrunA17_Chr5g0448301 62.500 512 165 5 213 717 140 631 0.0 621
Msa0732250 MtrunA17_Chr2g0289121 48.817 676 290 13 143 804 186 819 0.0 586
Msa0732250 MtrunA17_Chr4g0075261 45.339 708 300 12 143 804 198 864 0.0 583
Msa0732250 MtrunA17_Chr2g0289031 57.990 388 159 2 419 804 8 393 3.24e-149 443
Msa0732250 MtrunA17_Chr7g0275771 37.662 770 358 21 143 805 171 925 9.56e-148 457
Msa0732250 MtrunA17_Chr1g0192011 35.352 710 367 12 143 805 297 961 3.28e-137 431
Msa0732250 MtrunA17_Chr1g0147021 43.825 502 239 12 143 637 901 1366 2.51e-113 379
Msa0732250 MtrunA17_Chr1g0147021 74.265 136 35 0 660 795 1551 1686 1.70e-58 217
Msa0732250 MtrunA17_Chr2g0281051 33.333 489 303 9 148 627 242 716 1.22e-72 256
Msa0732250 MtrunA17_Chr2g0281051 48.993 149 76 0 660 808 810 958 2.36e-40 160
Msa0732250 MtrunA17_Chr8g0364421 45.736 258 109 3 221 478 3 229 6.42e-64 213
Msa0732250 MtrunA17_Chr1g0211701 83.478 115 19 0 693 807 4 118 3.39e-63 209
Msa0732250 MtrunA17_Chr7g0231061 62.424 165 62 0 480 644 12 176 1.68e-61 206
Msa0732250 MtrunA17_Chr4g0048531 38.721 297 171 5 335 627 727 1016 5.69e-58 215
Msa0732250 MtrunA17_Chr4g0048531 54.054 148 64 2 659 803 1132 1278 2.05e-43 170
Msa0732250 MtrunA17_Chr4g0048531 38.462 130 75 2 149 273 296 425 9.39e-20 95.1
Msa0732250 MtrunA17_Chr8g0361381 51.872 187 86 1 415 601 26 208 2.52e-57 195
Msa0732250 MtrunA17_Chr2g0289091 62.585 147 45 3 633 769 274 420 4.87e-51 184
Msa0732250 MtrunA17_Chr2g0289091 55.862 145 63 1 490 634 20 163 8.09e-45 167
Msa0732250 MtrunA17_Chr8g0361391 75.281 89 21 1 659 747 50 137 3.77e-41 148
Msa0732250 MtrunA17_Chr8g0340381 66.165 133 26 3 514 646 36 149 9.06e-40 145
Msa0732250 MtrunA17_Chr2g0289041 38.500 200 114 4 143 342 11 201 5.04e-38 140
Msa0732250 MtrunA17_Chr1g0211671 75.806 62 15 0 746 807 15 76 6.30e-27 106
Msa0732250 MtrunA17_Chr8g0364411 56.098 82 35 1 143 224 64 144 5.54e-20 87.4
Msa0732250 MtrunA17_Chr3g0119761 63.333 60 22 0 587 646 55 114 1.39e-14 71.2
Msa0732250 MtrunA17_Chr2g0289101 32.558 129 81 3 245 372 8 131 7.19e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0732250 AT3G07610.1 48.607 718 316 6 140 808 182 895 0.0 660
Msa0732250 AT1G11950.1 49.925 665 310 7 143 804 224 868 0.0 648
Msa0732250 AT1G11950.3 49.925 665 310 7 143 804 224 868 0.0 648
Msa0732250 AT3G07610.3 47.354 737 319 7 140 808 182 917 0.0 643
Msa0732250 AT1G62310.1 49.848 658 299 11 143 788 240 878 0.0 622
Msa0732250 AT1G11950.2 47.492 598 291 7 143 737 224 801 0.0 543
Msa0732250 AT3G07610.2 39.683 630 311 9 41 607 67 690 3.45e-132 412
Msa0732250 AT4G00990.2 42.940 517 262 11 143 650 112 604 3.47e-123 389
Msa0732250 AT4G00990.2 63.810 105 33 2 641 745 671 770 1.15e-33 139
Msa0732250 AT4G00990.3 42.940 517 262 11 143 650 112 604 5.16e-123 388
Msa0732250 AT4G00990.3 60.177 113 40 2 641 753 671 778 2.30e-34 141
Msa0732250 AT4G00990.1 42.940 517 262 11 143 650 112 604 2.01e-122 389
Msa0732250 AT4G00990.1 61.350 163 58 2 641 803 671 828 3.45e-56 207
Msa0732250 AT1G09060.4 31.728 706 388 14 143 805 251 905 9.64e-108 352
Msa0732250 AT1G09060.3 31.728 706 388 14 143 805 251 905 9.64e-108 352
Msa0732250 AT1G09060.2 31.728 706 388 14 143 805 237 891 9.82e-108 352
Msa0732250 AT1G09060.1 31.728 706 388 14 143 805 237 891 9.82e-108 352
Msa0732250 AT4G21430.1 29.915 702 404 12 148 808 262 916 4.66e-93 312

Find 184 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCACCATGCAGATAATT+TGG 0.144590 5_1:-44369092 None:intergenic
TTTGTATCTGGTTACTTTCT+TGG 0.160659 5_1:-44369117 None:intergenic
GGATTTGTATATTCTTTAAA+TGG 0.213495 5_1:-44370099 None:intergenic
AGTACATGCGCTCATCATTA+TGG 0.215750 5_1:-44368838 None:intergenic
TCTTTACTGGGTACACAAAT+TGG 0.224530 5_1:+44369965 Msa0732250:CDS
GATCTTCATCACGATGATTT+AGG 0.227135 5_1:+44369482 Msa0732250:CDS
ACTAACTTTACCTCCTTTAC+AGG 0.233581 5_1:-44371130 None:intergenic
CTTCGTTGTGGGCAGCTTCT+AGG 0.236807 5_1:+44369029 Msa0732250:CDS
ATTCCTTAGATGGTGCTCTT+TGG 0.245043 5_1:+44371023 Msa0732250:CDS
TTCCTTAGATGGTGCTCTTT+GGG 0.262549 5_1:+44371024 Msa0732250:CDS
AATGTGCACCAATTCTTTAC+TGG 0.265399 5_1:+44369952 Msa0732250:CDS
AGTACATTGCTGACAATTAC+AGG 0.278275 5_1:-44369536 None:intergenic
AAACAAGAACAAGTCACTTT+TGG 0.285165 5_1:+44369625 Msa0732250:CDS
AGCATCAGGTGCTTTGTATC+TGG 0.288535 5_1:-44369129 None:intergenic
GTTGGTGGGGATTCCTTAGA+TGG 0.294738 5_1:+44371013 Msa0732250:CDS
TCACAATTAATCTCAGGTTT+TGG 0.298428 5_1:-44369224 None:intergenic
CTTTCTTCAAATAGTTTAGA+AGG 0.302686 5_1:-44370039 None:intergenic
TACCTCCAATTTGTCCTCTA+TGG 0.305460 5_1:-44373935 None:intergenic
TCATATTGCTGAAGCAAAAC+TGG 0.320106 5_1:+44370874 Msa0732250:CDS
TCTATGGACCTGTGATTTAC+TGG 0.329135 5_1:-44373919 None:intergenic
AGCATTCTGTGCAGCTTCTA+TGG 0.339021 5_1:-44368974 None:intergenic
GGAGCTACATGGTGATATTC+AGG 0.343116 5_1:+44370958 Msa0732250:CDS
ATGCCCGATGGTTAGATAAA+AGG 0.344516 5_1:-44372449 None:intergenic
ATTCCTACATGGTCAAAATC+TGG 0.346904 5_1:+44369167 Msa0732250:CDS
AGGCCAATTCTGTTTATCCT+TGG 0.348155 5_1:-44369989 None:intergenic
ATCCCAAAGAGCACCATCTA+AGG 0.353655 5_1:-44371026 None:intergenic
GCTCTTGTTTGAATCCTGTT+AGG 0.355578 5_1:+44369372 Msa0732250:CDS
GGCCAATTCTGTTTATCCTT+GGG 0.360073 5_1:-44369988 None:intergenic
AGAAGCATTTCAGAGAGTTC+AGG 0.389778 5_1:+44371092 Msa0732250:CDS
GTACATGCGCTCATCATTAT+GGG 0.392626 5_1:-44368837 None:intergenic
ATATCATCTCTATTCCTAAC+AGG 0.396727 5_1:-44369386 None:intergenic
AAGTATTGAAATTGAAAGAT+TGG 0.403818 5_1:+44370013 Msa0732250:CDS
ACTAACTCAGAGATGCATTC+TGG 0.406256 5_1:-44369281 None:intergenic
AGAGGACGTACCTGCATTGC+AGG 0.406514 5_1:+44371060 Msa0732250:CDS
CAGCTCTTTGCAAAGAATCC+AGG 0.410316 5_1:+44369429 Msa0732250:CDS
TCTTCCACATTTAATACGAT+TGG 0.410475 5_1:+44368457 Msa0732250:CDS
CTTCACCATGCAGATAATTT+GGG 0.410728 5_1:-44369091 None:intergenic
TCTTTCTAGAATAGACATAA+TGG 0.411099 5_1:-44367463 None:intergenic
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5_1:+44369510 Msa0732250:CDS
TTTGACCATGTAGGAATCTC+AGG 0.414130 5_1:-44369161 None:intergenic
TCAGGCTGGGCACCAGCATC+AGG 0.415198 5_1:-44369143 None:intergenic
TTGTGTACCCAGTAAAGAAT+TGG 0.417175 5_1:-44369960 None:intergenic
AATGTACTTGAATGTACATC+TGG 0.421952 5_1:+44369551 Msa0732250:CDS
TATGGATTTGCTCAGGAGCT+TGG 0.422137 5_1:+44370204 Msa0732250:CDS
TTACCTTCAGATTTCGGACT+TGG 0.425214 5_1:-44372665 None:intergenic
AAAATAGTTTGTTGGTTGGT+GGG 0.432080 5_1:+44370999 Msa0732250:CDS
AAAACAGACTCCTCACAATA+AGG 0.433520 5_1:+44367724 Msa0732250:CDS
AACAAACGCGGGAGCGGTGG+CGG 0.439355 5_1:+44367493 Msa0732250:CDS
AGGCACTTGATTGCTTAGAT+TGG 0.440544 5_1:+44369654 Msa0732250:CDS
TTCAGATATTCCTGCAATGC+AGG 0.441628 5_1:-44371070 None:intergenic
GGCCCAAGGATAAACAGAAT+TGG 0.443826 5_1:+44369986 Msa0732250:CDS
AAGATAAACTCAAAATCAAA+TGG 0.449448 5_1:-44369062 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.451500 5_1:+44369561 Msa0732250:CDS
AAGAGCTTTGAGTATATACT+TGG 0.456205 5_1:-44368435 None:intergenic
GACAAAATCAAGAGCAACCT+TGG 0.458966 5_1:-44373842 None:intergenic
TCTGGCTTTAGAACTTCATC+AGG 0.461474 5_1:-44370156 None:intergenic
AACAATAAATGCTCCCGTCT+TGG 0.461569 5_1:+44367616 Msa0732250:CDS
GTCAAAGAAATGACAGTGGC+AGG 0.462164 5_1:+44368027 Msa0732250:intron
TTCTTCTTGTCTACCAAGAC+GGG 0.465663 5_1:-44367629 None:intergenic
CAGGTCCATAGAGGACAAAT+TGG 0.466017 5_1:+44373930 Msa0732250:CDS
TTCAGATTTCGGACTTGGTG+GGG 0.467992 5_1:-44372660 None:intergenic
ATTTGCTCAGGAGCTTGGAC+GGG 0.473572 5_1:+44370209 Msa0732250:CDS
GCAAAGCTTGTTTGAAGTCA+CGG 0.474647 5_1:+44368251 Msa0732250:CDS
CCTTCAGATTTCGGACTTGG+TGG 0.476898 5_1:-44372662 None:intergenic
AAACGCGGGAGCGGTGGCGG+AGG 0.477252 5_1:+44367496 Msa0732250:CDS
ACGATTGGATCAAGATCAAA+TGG 0.478348 5_1:+44368472 Msa0732250:CDS
GATTTGCTCAGGAGCTTGGA+CGG 0.479287 5_1:+44370208 Msa0732250:CDS
CATGCAGATAATTTGGGCCT+CGG 0.479508 5_1:-44369085 None:intergenic
ACTACAGTCAATTAAAGAAA+AGG 0.482579 5_1:+44368376 Msa0732250:intron
TATTGCTTATGGATTTGCTC+AGG 0.486399 5_1:+44370197 Msa0732250:CDS
GTTGCCGTGAGCTTCGTTGT+GGG 0.489346 5_1:+44369018 Msa0732250:CDS
ATGTGCACCAATTCTTTACT+GGG 0.492244 5_1:+44369953 Msa0732250:CDS
CTTCAGATTTCGGACTTGGT+GGG 0.495361 5_1:-44372661 None:intergenic
CCGTGATCACAATTAATCTC+AGG 0.496158 5_1:-44369230 None:intergenic
CACTGTTGAAAATAGTTTGT+TGG 0.496892 5_1:+44370991 Msa0732250:CDS
TTTCTTCTTGTCTACCAAGA+CGG 0.504344 5_1:-44367630 None:intergenic
GTTGTGGGCAGCTTCTAGGT+GGG 0.507656 5_1:+44369033 Msa0732250:CDS
GGAAACCAACGATCATCATC+AGG 0.509624 5_1:+44368403 Msa0732250:CDS
TGTATGTAGGTATTGAGCCT+TGG 0.510562 5_1:+44372589 Msa0732250:intron
TGTATATTCTTTAAATGGCA+AGG 0.512473 5_1:-44370094 None:intergenic
CGTTGTGGGCAGCTTCTAGG+TGG 0.513332 5_1:+44369032 Msa0732250:CDS
TGTCCATTGCTCTCCTGTAA+AGG 0.514874 5_1:+44371117 Msa0732250:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5_1:+44369509 Msa0732250:CDS
GGCGGAATTCCTCTGTCAAA+CGG 0.517791 5_1:-44373891 None:intergenic
TCAAGATCAAATGGCTGAGA+AGG 0.518447 5_1:+44368481 Msa0732250:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 5_1:-44370940 None:intergenic
GAAAATAGTTTGTTGGTTGG+TGG 0.519502 5_1:+44370998 Msa0732250:CDS
AACAACAACACATTCACGAC+GGG 0.521041 5_1:+44367422 Msa0732250:CDS
TGTTGCCGTGAGCTTCGTTG+TGG 0.522924 5_1:+44369017 Msa0732250:CDS
TCTTTCAATTTCAATACTTG+AGG 0.529125 5_1:-44370009 None:intergenic
TTCCTACATGGTCAAAATCT+GGG 0.531797 5_1:+44369168 Msa0732250:CDS
AAATAGTTTGTTGGTTGGTG+GGG 0.532716 5_1:+44371000 Msa0732250:CDS
ACCATGTAGGAATCTCAGGC+TGG 0.533279 5_1:-44369157 None:intergenic
CCTGAGATTAATTGTGATCA+CGG 0.533747 5_1:+44369230 Msa0732250:CDS
TTTGTCTCTCCTGAAAATGT+TGG 0.534278 5_1:+44373859 Msa0732250:CDS
TCAGATTTCGGACTTGGTGG+GGG 0.534353 5_1:-44372659 None:intergenic
AATGCACGCCACATGACAAA+CGG 0.541027 5_1:-44369587 None:intergenic
GTCAATTAAAGAAAAGGAGG+AGG 0.545970 5_1:+44368382 Msa0732250:intron
GAGATAGAAGCCAAGATACA+AGG 0.546758 5_1:+44368503 Msa0732250:CDS
GGAAGAAGAAGCAGCTTCAT+CGG 0.547422 5_1:-44367558 None:intergenic
TTTGCTCAGGAGCTTGGACG+GGG 0.547453 5_1:+44370210 Msa0732250:CDS
ATAATGATGAGCGCATGTAC+TGG 0.548032 5_1:+44368840 Msa0732250:CDS
AGCTCTTTGCAAAGAATCCA+GGG 0.549815 5_1:+44369430 Msa0732250:CDS
AGGTTAAGAGCACCTTTGAA+AGG 0.550974 5_1:-44370120 None:intergenic
TTAGATAAAAGGTCTGATCA+TGG 0.552811 5_1:-44372438 None:intergenic
ACCTGTGATTTACTGGAAGT+TGG 0.553493 5_1:-44373912 None:intergenic
TCAGATGCACCAAATGCAAA+CGG 0.554343 5_1:+44368054 Msa0732250:CDS
TAAAAGGTCTGATCATGGAT+GGG 0.555220 5_1:-44372433 None:intergenic
ATAAAAGGTCTGATCATGGA+TGG 0.557609 5_1:-44372434 None:intergenic
CTCAACCTGATGATGATCGT+TGG 0.558986 5_1:-44368408 None:intergenic
ACTCAGAACAAACGCGGGAG+CGG 0.564215 5_1:+44367487 Msa0732250:CDS
AAGGTATCCTCGATTGAAAG+AGG 0.564928 5_1:+44368183 Msa0732250:intron
GTTGAAAATAGTTTGTTGGT+TGG 0.566984 5_1:+44370995 Msa0732250:CDS
GCTGGGAGCCGTTTGTCATG+TGG 0.567136 5_1:+44369579 Msa0732250:CDS
GAATATACAAATCCTTTCAA+AGG 0.567529 5_1:+44370108 Msa0732250:CDS
TGTGATTTACTGGAAGTTGG+CGG 0.568181 5_1:-44373909 None:intergenic
GCACCTTGAGCAAGACAAGA+GGG 0.570458 5_1:+44370937 Msa0732250:CDS
TGATCCAATCGTATTAAATG+TGG 0.570512 5_1:-44368461 None:intergenic
AAGTTTACCGCGTCATTGTG+CGG 0.570831 5_1:+44370059 Msa0732250:CDS
CTGAAGCAAAACTGGATCGT+GGG 0.571980 5_1:+44370882 Msa0732250:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.572127 5_1:+44369562 Msa0732250:CDS
CTAGAATAGACATAATGGAT+AGG 0.573963 5_1:-44367458 None:intergenic
AGATACAAAGCACCTGATGC+TGG 0.574516 5_1:+44369131 Msa0732250:CDS
AGCTTCTGAACAAAAGTCCA+AGG 0.575249 5_1:-44372606 None:intergenic
CATCAGGCAGCTTCACAGCA+AGG 0.578623 5_1:-44370140 None:intergenic
TGATGAAGATCTACAGCCCT+AGG 0.579045 5_1:-44369470 None:intergenic
GCCAACTTCCAGTAAATCAC+AGG 0.581223 5_1:+44373911 Msa0732250:CDS
ACAATTTCTCCGAAGAAACC+CGG 0.582288 5_1:+44367695 Msa0732250:CDS
CGAGGCCCAAATTATCTGCA+TGG 0.583825 5_1:+44369086 Msa0732250:CDS
AGTTGTTCCTCTTTCAATCG+AGG 0.584177 5_1:-44368190 None:intergenic
AAGAAGAAGAATCTTGGTGA+TGG 0.584771 5_1:+44367656 Msa0732250:CDS
TGAGTTAGTATGTAAAGCAA+AGG 0.585122 5_1:+44369295 Msa0732250:CDS
GTCCATAGAGGACAAATTGG+AGG 0.587047 5_1:+44373933 Msa0732250:CDS
CCTCCTTTACAGGAGAGCAA+TGG 0.587247 5_1:-44371120 None:intergenic
TTTCTTCGGAGAAATTGTGT+TGG 0.590984 5_1:-44367690 None:intergenic
AGTAAATCACAGGTCCATAG+AGG 0.591019 5_1:+44373921 Msa0732250:CDS
CAGAACAAACGCGGGAGCGG+TGG 0.591548 5_1:+44367490 Msa0732250:CDS
CAAGACAAGAGGGAGCTACA+TGG 0.591607 5_1:+44370947 Msa0732250:CDS
GCTGCCCACAACGAAGCTCA+CGG 0.592775 5_1:-44369022 None:intergenic
GAATAGACATAATGGATAGG+AGG 0.597179 5_1:-44367455 None:intergenic
TTGCAGTTACCACAGCAGAC+AGG 0.598583 5_1:-44368226 None:intergenic
TTGTGGGCAGCTTCTAGGTG+GGG 0.602777 5_1:+44369034 Msa0732250:CDS
AAAAGGTCTGATCATGGATG+GGG 0.603357 5_1:-44372432 None:intergenic
TCTTCAAATAGTTTAGAAGG+AGG 0.604177 5_1:-44370036 None:intergenic
AGAATTTAAGCATACTGCAT+CGG 0.606233 5_1:-44370265 None:intergenic
ACAGTCAATTAAAGAAAAGG+AGG 0.606305 5_1:+44368379 Msa0732250:intron
CCCAGCCTGAGATTCCTACA+TGG 0.609328 5_1:+44369156 Msa0732250:CDS
AACGAAGCTCACGGCAACAG+AGG 0.614200 5_1:-44369013 None:intergenic
CCATGTAGGAATCTCAGGCT+GGG 0.616006 5_1:-44369156 None:intergenic
TTGACTCTTTCGAACAGCAA+CGG 0.617245 5_1:-44367579 None:intergenic
GAGGCATGTCCTGTCTGCTG+TGG 0.617423 5_1:+44368217 Msa0732250:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.618569 5_1:+44370936 Msa0732250:CDS
TGAAGTTCTAAAGCCAGACA+TGG 0.620406 5_1:+44370161 Msa0732250:CDS
AATGAAACTTCAAGATGCAG+AGG 0.623550 5_1:+44369331 Msa0732250:CDS
GCTGAAGCAAAACTGGATCG+TGG 0.631664 5_1:+44370881 Msa0732250:CDS
CTACATGGTGATATTCAGGA+TGG 0.633510 5_1:+44370962 Msa0732250:CDS
CCATTGCTCTCCTGTAAAGG+AGG 0.635769 5_1:+44371120 Msa0732250:CDS
CCACCAAGTCCGAAATCTGA+AGG 0.638088 5_1:+44372662 Msa0732250:CDS
TCAAAGAAATGACAGTGGCA+GGG 0.638575 5_1:+44368028 Msa0732250:intron
TTGCTGTTCGAAAGAGTCAA+CGG 0.641060 5_1:+44367582 Msa0732250:CDS
GAAAGAGGAACAACTTGCTG+AGG 0.642111 5_1:+44368198 Msa0732250:CDS
CACGGCAACAGAGGAGACAA+AGG 0.649807 5_1:-44369004 None:intergenic
TGAGTGCTTCCGTTTGACAG+AGG 0.665002 5_1:+44373882 Msa0732250:CDS
GAAGTTCTAAAGCCAGACAT+GGG 0.665837 5_1:+44370162 Msa0732250:CDS
AGAAGAAGCAGCTTCATCGG+TGG 0.666496 5_1:-44367555 None:intergenic
CAACAACAACACATTCACGA+CGG 0.666770 5_1:+44367421 Msa0732250:CDS
TACATGCGCTCATCATTATG+GGG 0.667563 5_1:-44368836 None:intergenic
ATGATATACACAATAACACA+AGG 0.668038 5_1:+44369402 Msa0732250:CDS
TGGGTACACAAATTGGCCCA+AGG 0.673718 5_1:+44369972 Msa0732250:CDS
ATAAACTCCGCACAATGACG+CGG 0.675233 5_1:-44370066 None:intergenic
GACGGGGTGATTCAGTGACT+AGG 0.676943 5_1:+44370226 Msa0732250:CDS
GGGTGGCATGCTGATAGTGA+CGG 0.679311 5_1:+44369188 Msa0732250:CDS
CGTATATGCTATGATTGATG+TGG 0.680480 5_1:+44374372 Msa0732250:CDS
AAGAGACTCAGAACAAACGC+GGG 0.691625 5_1:+44367482 Msa0732250:CDS
TGATTGCTTAGATTGGTGCG+AGG 0.693830 5_1:+44369661 Msa0732250:CDS
GATGTTGTGACCTTATTGTG+AGG 0.707489 5_1:-44367734 None:intergenic
AAAGAGACTCAGAACAAACG+CGG 0.708789 5_1:+44367481 Msa0732250:CDS
CTACATGGTCAAAATCTGGG+TGG 0.717604 5_1:+44369171 Msa0732250:CDS
CTGCATCGGACATATCACAA+TGG 0.718824 5_1:-44370251 None:intergenic
CAATGTCAAAGAAATGACAG+TGG 0.718966 5_1:+44368023 Msa0732250:intron
GCTCTTTGCAAAGAATCCAG+GGG 0.726479 5_1:+44369431 Msa0732250:CDS
TGATATACACAATAACACAA+GGG 0.738813 5_1:+44369403 Msa0732250:CDS
ACAACAACACATTCACGACG+GGG 0.745848 5_1:+44367423 Msa0732250:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5_1:+44369511 Msa0732250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTATTTTTTTTT+TGG + chr5_1:44370830-44370849 Msa0732250:intron 0.0%
!!! ATTATTTTCCATTTTTTAAT+TGG + chr5_1:44368754-44368773 Msa0732250:intron 10.0%
!! AAATTATGTATGTGATTAAT+AGG - chr5_1:44367826-44367845 None:intergenic 15.0%
!! TAAATTAGATTACATTACAT+TGG - chr5_1:44368147-44368166 None:intergenic 15.0%
!! TATTTGAGTATCATATTAAA+AGG + chr5_1:44370360-44370379 Msa0732250:intron 15.0%
!!! TTATTTTTTTTTTGGCTTTT+AGG + chr5_1:44370838-44370857 Msa0732250:intron 15.0%
!! TTATTATAGAACACTATAAT+AGG + chr5_1:44373090-44373109 Msa0732250:intron 15.0%
!! TCTAATATTTAACTAATGTT+TGG + chr5_1:44374210-44374229 Msa0732250:intron 15.0%
!! ATTATTATTATTATGCACTG+TGG + chr5_1:44367789-44367808 Msa0732250:intron 20.0%
!! AAAAAAAATACCTTGTATCT+TGG - chr5_1:44368516-44368535 None:intergenic 20.0%
!! TATATATAAAATGTGAACCA+TGG - chr5_1:44368590-44368609 None:intergenic 20.0%
!! AAGATAAACTCAAAATCAAA+TGG - chr5_1:44369065-44369084 None:intergenic 20.0%
!!! AAGTATTGAAATTGAAAGAT+TGG + chr5_1:44370013-44370032 Msa0732250:CDS 20.0%
!! GGATTTGTATATTCTTTAAA+TGG - chr5_1:44370102-44370121 None:intergenic 20.0%
!!! TACATCATATCTTAAGTTTT+TGG + chr5_1:44370457-44370476 Msa0732250:intron 20.0%
!!! GTATTTTGGTAATTGAAAAT+TGG + chr5_1:44370544-44370563 Msa0732250:intron 20.0%
!!! TCATTAGATAAGGTATTTTT+TGG + chr5_1:44370594-44370613 Msa0732250:intron 20.0%
!!! ATAATTTTCTATCATCTGTT+TGG + chr5_1:44371157-44371176 Msa0732250:intron 20.0%
!! GCAAAATGTGAAAAATAAAA+GGG - chr5_1:44371264-44371283 None:intergenic 20.0%
!! AGCAAAATGTGAAAAATAAA+AGG - chr5_1:44371265-44371284 None:intergenic 20.0%
!!! TTTTTCTATGTTGTTATTGT+TGG + chr5_1:44371363-44371382 Msa0732250:intron 20.0%
!! ATGTAACTTAAATTACTGAT+AGG - chr5_1:44371514-44371533 None:intergenic 20.0%
!! TACATTGTAATATGTTGTAT+TGG + chr5_1:44371817-44371836 Msa0732250:intron 20.0%
!! AAGTACGAAAATGATTTATA+GGG - chr5_1:44371944-44371963 None:intergenic 20.0%
!! AAAGTACGAAAATGATTTAT+AGG - chr5_1:44371945-44371964 None:intergenic 20.0%
!! TATTGAAACATATGATATGA+AGG + chr5_1:44372203-44372222 Msa0732250:intron 20.0%
!! ATTGAAACATATGATATGAA+GGG + chr5_1:44372204-44372223 Msa0732250:intron 20.0%
!!! TACTTATTTTGTTTGATTTG+TGG + chr5_1:44372516-44372535 Msa0732250:intron 20.0%
!!! ATAAGAAGTATAACAGAATA+TGG - chr5_1:44373074-44373093 None:intergenic 20.0%
!! TTATATGGAAGTTAATTAAG+TGG + chr5_1:44373206-44373225 Msa0732250:intron 20.0%
!! AAGTTAATTAAGTGGTTATT+GGG + chr5_1:44373214-44373233 Msa0732250:intron 20.0%
!! AATATTATTGATCTAACCTT+AGG - chr5_1:44373356-44373375 None:intergenic 20.0%
!!! TTTTTTTATACATATCAGTG+TGG + chr5_1:44373718-44373737 Msa0732250:intron 20.0%
!!! TCATATCAACAGATTATTTT+TGG + chr5_1:44374289-44374308 Msa0732250:intron 20.0%
!!! TCTTTCTAGAATAGACATAA+TGG - chr5_1:44367466-44367485 None:intergenic 25.0%
! AAAAAGAAGAAGAAGAATCT+TGG + chr5_1:44367650-44367669 Msa0732250:CDS 25.0%
! TTCAATGTAATTGTATGTGT+AGG + chr5_1:44367894-44367913 Msa0732250:intron 25.0%
! ACTAACTATTCAATAAACAG+TGG + chr5_1:44367973-44367992 Msa0732250:intron 25.0%
! GTGTATGCTGTATAAAAAAA+TGG + chr5_1:44368087-44368106 Msa0732250:intron 25.0%
!!! TTATATCGTTTTTGTTGCTA+AGG + chr5_1:44368164-44368183 Msa0732250:intron 25.0%
! ATATATAATGTAGATAGCAG+AGG - chr5_1:44368317-44368336 None:intergenic 25.0%
! ACTACAGTCAATTAAAGAAA+AGG + chr5_1:44368376-44368395 Msa0732250:intron 25.0%
! AAGCAAATGACATAAATAAG+AGG - chr5_1:44368564-44368583 None:intergenic 25.0%
! AACTAAAAACTAATCGATCA+CGG - chr5_1:44368730-44368749 None:intergenic 25.0%
!!! TCCATTTTTTAATTGGATCT+TGG + chr5_1:44368761-44368780 Msa0732250:intron 25.0%
!!! CCATTTTTTAATTGGATCTT+GGG + chr5_1:44368762-44368781 Msa0732250:intron 25.0%
! ATGATATACACAATAACACA+AGG + chr5_1:44369402-44369421 Msa0732250:CDS 25.0%
! TGATATACACAATAACACAA+GGG + chr5_1:44369403-44369422 Msa0732250:CDS 25.0%
!!! ATGATTTAGGACATTTTCAA+TGG + chr5_1:44369495-44369514 Msa0732250:CDS 25.0%
! TCTTTCAATTTCAATACTTG+AGG - chr5_1:44370012-44370031 None:intergenic 25.0%
! CTTTCTTCAAATAGTTTAGA+AGG - chr5_1:44370042-44370061 None:intergenic 25.0%
! TGTATATTCTTTAAATGGCA+AGG - chr5_1:44370097-44370116 None:intergenic 25.0%
! GAATATACAAATCCTTTCAA+AGG + chr5_1:44370108-44370127 Msa0732250:CDS 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5_1:44370189-44370208 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5_1:44370186-44370205 Msa0732250:CDS 25.0%
!! TTAAAAGGTGCATAATTTGT+AGG + chr5_1:44370375-44370394 Msa0732250:intron 25.0%
!! ATTTGAAATGCTATTTACCT+TGG + chr5_1:44370522-44370541 Msa0732250:intron 25.0%
! TTTCAATTACCAAAATACCA+AGG - chr5_1:44370542-44370561 None:intergenic 25.0%
! ATTAGTTGCATCATTAGATA+AGG + chr5_1:44370584-44370603 Msa0732250:intron 25.0%
!! TGAAATATGAAAGATGGTTT+TGG + chr5_1:44370620-44370639 Msa0732250:intron 25.0%
! GCACAAACAAATAATTAATC+CGG - chr5_1:44370694-44370713 None:intergenic 25.0%
! GCTAAGAATTAAGTCAAATA+GGG - chr5_1:44371328-44371347 None:intergenic 25.0%
! AGCTAAGAATTAAGTCAAAT+AGG - chr5_1:44371329-44371348 None:intergenic 25.0%
! TACCTTGTAATATGTTCTAT+GGG + chr5_1:44371396-44371415 Msa0732250:intron 25.0%
! ATTACTGATAGGAATCTATA+GGG - chr5_1:44371503-44371522 None:intergenic 25.0%
! AATTACTGATAGGAATCTAT+AGG - chr5_1:44371504-44371523 None:intergenic 25.0%
! ATAAAAAATGCCCATAATGA+AGG + chr5_1:44371562-44371581 Msa0732250:intron 25.0%
!!! TGAGTAGTTAGTTTTGAATA+CGG + chr5_1:44372141-44372160 Msa0732250:intron 25.0%
! TTTCAATTTCAAAGTTCACT+TGG + chr5_1:44372301-44372320 Msa0732250:intron 25.0%
! GTGTTGAATTGTTAACAAAA+TGG - chr5_1:44372564-44372583 None:intergenic 25.0%
!!! GTGGATTTGTTTTATAATGA+AGG + chr5_1:44372702-44372721 Msa0732250:intron 25.0%
! TATTTAGCACTAATTCAACA+AGG - chr5_1:44372948-44372967 None:intergenic 25.0%
! AAGACTAAATTCTAATTCCT+AGG + chr5_1:44373007-44373026 Msa0732250:intron 25.0%
!!! ATGGAAGTTATTTTTTACCT+AGG - chr5_1:44373055-44373074 None:intergenic 25.0%
! TTATTATTATCTGTGTGTGT+CGG + chr5_1:44373150-44373169 Msa0732250:intron 25.0%
! ACATGAAAGAATTGGTTATA+TGG + chr5_1:44373191-44373210 Msa0732250:intron 25.0%
! GAAGTTAATTAAGTGGTTAT+TGG + chr5_1:44373213-44373232 Msa0732250:intron 25.0%
! AATAGGAATATGATACAAAC+TGG - chr5_1:44373410-44373429 None:intergenic 25.0%
! TCCTATTTAAACATTCCTAA+TGG + chr5_1:44373423-44373442 Msa0732250:intron 25.0%
! CCTATTTAAACATTCCTAAT+GGG + chr5_1:44373424-44373443 Msa0732250:intron 25.0%
! CTATTTAAACATTCCTAATG+GGG + chr5_1:44373425-44373444 Msa0732250:intron 25.0%
! TATTTAAACATTCCTAATGG+GGG + chr5_1:44373426-44373445 Msa0732250:intron 25.0%
! TAATCAAATCCATAATAGTC+AGG - chr5_1:44373963-44373982 None:intergenic 25.0%
! TGGATTTGATTATTCTGTTT+AGG + chr5_1:44373971-44373990 Msa0732250:intron 25.0%
! GGATTTGATTATTCTGTTTA+GGG + chr5_1:44373972-44373991 Msa0732250:intron 25.0%
! ACTCTTTACTAGATTCTATA+TGG - chr5_1:44374127-44374146 None:intergenic 25.0%
! AAACTACAATACTACTAGAT+AGG - chr5_1:44374173-44374192 None:intergenic 25.0%
!!! GTAGTTTTAATGTAAAGACA+AGG + chr5_1:44374186-44374205 Msa0732250:intron 25.0%
!! CTAGAATAGACATAATGGAT+AGG - chr5_1:44367461-44367480 None:intergenic 30.0%
! ATATCTTTTCCGTTTGCATT+TGG - chr5_1:44368066-44368085 None:intergenic 30.0%
ACAGTCAATTAAAGAAAAGG+AGG + chr5_1:44368379-44368398 Msa0732250:intron 30.0%
!! AAGAGCTTTGAGTATATACT+TGG - chr5_1:44368438-44368457 None:intergenic 30.0%
TCTTCCACATTTAATACGAT+TGG + chr5_1:44368457-44368476 Msa0732250:CDS 30.0%
TGATCCAATCGTATTAAATG+TGG - chr5_1:44368464-44368483 None:intergenic 30.0%
AGACAAAAAAGCAAGAAGAT+AGG - chr5_1:44368539-44368558 None:intergenic 30.0%
!!! TATGTCATTTGCTTTTTCCA+TGG + chr5_1:44368570-44368589 Msa0732250:intron 30.0%
AAGTTATCGAGAAGAAAGAA+AGG - chr5_1:44368613-44368632 None:intergenic 30.0%
TTGTATTTCATCTCATGTGT+CGG + chr5_1:44368699-44368718 Msa0732250:intron 30.0%
CCCAAGATCCAATTAAAAAA+TGG - chr5_1:44368765-44368784 None:intergenic 30.0%
AGTCATTAACAATGTAGCAT+TGG - chr5_1:44368910-44368929 None:intergenic 30.0%
! TTTGTATCTGGTTACTTTCT+TGG - chr5_1:44369120-44369139 None:intergenic 30.0%
! TCACAATTAATCTCAGGTTT+TGG - chr5_1:44369227-44369246 None:intergenic 30.0%
! AAAATACGCTTTTCAGTTCA+AGG - chr5_1:44369259-44369278 None:intergenic 30.0%
TGAGTTAGTATGTAAAGCAA+AGG + chr5_1:44369295-44369314 Msa0732250:CDS 30.0%
ATATCATCTCTATTCCTAAC+AGG - chr5_1:44369389-44369408 None:intergenic 30.0%
AATGTACTTGAATGTACATC+TGG + chr5_1:44369551-44369570 Msa0732250:CDS 30.0%
!! AAACAAGAACAAGTCACTTT+TGG + chr5_1:44369625-44369644 Msa0732250:CDS 30.0%
AAAGAAAATGAACACAACTG+GGG - chr5_1:44369836-44369855 None:intergenic 30.0%
GAAAGAAAATGAACACAACT+GGG - chr5_1:44369837-44369856 None:intergenic 30.0%
TGAAAGAAAATGAACACAAC+TGG - chr5_1:44369838-44369857 None:intergenic 30.0%
AGAAGTTACAAGCAACTTAT+AGG - chr5_1:44369892-44369911 None:intergenic 30.0%
TCTTCAAATAGTTTAGAAGG+AGG - chr5_1:44370039-44370058 None:intergenic 30.0%
AGAATTTAAGCATACTGCAT+CGG - chr5_1:44370268-44370287 None:intergenic 30.0%
! TAAATTCTCTGAGTTTTTCC+TGG + chr5_1:44370280-44370299 Msa0732250:intron 30.0%
!! TGCTATTTACCTTGGTATTT+TGG + chr5_1:44370530-44370549 Msa0732250:intron 30.0%
! TGGTCTTGAAATATGAAAGA+TGG + chr5_1:44370614-44370633 Msa0732250:intron 30.0%
CAGTTCTTTACTCTATTATG+AGG + chr5_1:44370783-44370802 Msa0732250:intron 30.0%
! CAACAAACTATTTTCAACAG+TGG - chr5_1:44370993-44371012 None:intergenic 30.0%
! CACTGTTGAAAATAGTTTGT+TGG + chr5_1:44370991-44371010 Msa0732250:CDS 30.0%
!! GTTGAAAATAGTTTGTTGGT+TGG + chr5_1:44370995-44371014 Msa0732250:CDS 30.0%
!! AAAATAGTTTGTTGGTTGGT+GGG + chr5_1:44370999-44371018 Msa0732250:CDS 30.0%
ATTAATGACTCCAGTTAACA+GGG - chr5_1:44371188-44371207 None:intergenic 30.0%
TTCACAGCAGCAAAAATAAT+CGG - chr5_1:44371226-44371245 None:intergenic 30.0%
GTACCTTGTAATATGTTCTA+TGG + chr5_1:44371395-44371414 Msa0732250:intron 30.0%
ACCTTGTAATATGTTCTATG+GGG + chr5_1:44371397-44371416 Msa0732250:intron 30.0%
! ACCCAAATCTCTCTTTTTAT+AGG + chr5_1:44371773-44371792 Msa0732250:intron 30.0%
CCCTATAAAAAGAGAGATTT+GGG - chr5_1:44371777-44371796 None:intergenic 30.0%
! CCCAAATCTCTCTTTTTATA+GGG + chr5_1:44371774-44371793 Msa0732250:intron 30.0%
ACCCTATAAAAAGAGAGATT+TGG - chr5_1:44371778-44371797 None:intergenic 30.0%
! TAATATGTTGTATTGGTCCT+TGG + chr5_1:44371824-44371843 Msa0732250:intron 30.0%
GAGAAAACAAGAGATAATGA+AGG - chr5_1:44372026-44372045 None:intergenic 30.0%
AGTGATTACTTACATCTGTT+AGG + chr5_1:44372050-44372069 Msa0732250:intron 30.0%
ACAAAATTCCATACTCATGA+TGG - chr5_1:44372168-44372187 None:intergenic 30.0%
! AATTTTGTTGATGCGAATAG+CGG + chr5_1:44372180-44372199 Msa0732250:intron 30.0%
ATATGAAGGGAAATGCATTA+TGG + chr5_1:44372217-44372236 Msa0732250:intron 30.0%
TGAAAGAACATCTACTGAAT+CGG - chr5_1:44372268-44372287 None:intergenic 30.0%
! TTTTTGAATGACATCTCCTT+TGG + chr5_1:44372393-44372412 Msa0732250:intron 30.0%
TGAATAACCTATAATGCCAA+AGG - chr5_1:44372412-44372431 None:intergenic 30.0%
TTAGATAAAAGGTCTGATCA+TGG - chr5_1:44372441-44372460 None:intergenic 30.0%
! CAAGTTTTACCTTCAGATTT+CGG - chr5_1:44372674-44372693 None:intergenic 30.0%
TTCTCAAACTTTCAAGAACT+TGG - chr5_1:44372888-44372907 None:intergenic 30.0%
AATACCAGTATACAACTACT+AGG - chr5_1:44372914-44372933 None:intergenic 30.0%
GTTGTAATAATGTTCTACCT+AGG - chr5_1:44373027-44373046 None:intergenic 30.0%
GGTAGAACATTATTACAACA+AGG + chr5_1:44373028-44373047 Msa0732250:intron 30.0%
TAGGAGATTTCTTAGTTAGT+TGG + chr5_1:44373109-44373128 Msa0732250:intron 30.0%
CCCATTAGGAATGTTTAAAT+AGG - chr5_1:44373427-44373446 None:intergenic 30.0%
!!! GCTAGTTTTGTGATTTGATT+AGG - chr5_1:44373503-44373522 None:intergenic 30.0%
! ATGGCTTGAAGTATTTATGT+GGG - chr5_1:44373545-44373564 None:intergenic 30.0%
! TATGGCTTGAAGTATTTATG+TGG - chr5_1:44373546-44373565 None:intergenic 30.0%
GGTAAATACTAAGATATCAG+AGG - chr5_1:44373634-44373653 None:intergenic 30.0%
GGTAATCTGTAAGAAATTGT+AGG - chr5_1:44373753-44373772 None:intergenic 30.0%
! TATTCTGTTTAGGGTTGATT+AGG + chr5_1:44373981-44374000 Msa0732250:intron 30.0%
! CTTTCAGTTACACCTATTTT+TGG + chr5_1:44374006-44374025 Msa0732250:intron 30.0%
ATGTTCAGAGATTTGAACAA+TGG - chr5_1:44374045-44374064 None:intergenic 30.0%
TCAAATCTCTGAACATTTGT+TGG + chr5_1:44374049-44374068 Msa0732250:intron 30.0%
AATCTGTTGATATGACATGA+TGG - chr5_1:44374284-44374303 None:intergenic 30.0%
!! GAATAGACATAATGGATAGG+AGG - chr5_1:44367458-44367477 None:intergenic 35.0%
TTTCTTCTTGTCTACCAAGA+CGG - chr5_1:44367633-44367652 None:intergenic 35.0%
AAGAAGAAGAATCTTGGTGA+TGG + chr5_1:44367656-44367675 Msa0732250:CDS 35.0%
TTTCTTCGGAGAAATTGTGT+TGG - chr5_1:44367693-44367712 None:intergenic 35.0%
! TTTCTTTTTCCGGGTTTCTT+CGG - chr5_1:44367707-44367726 None:intergenic 35.0%
! AGGAGTCTGTTTTCTTTTTC+CGG - chr5_1:44367717-44367736 None:intergenic 35.0%
AAAACAGACTCCTCACAATA+AGG + chr5_1:44367724-44367743 Msa0732250:CDS 35.0%
GTAATTGTATGTGTAGGTGT+CGG + chr5_1:44367900-44367919 Msa0732250:intron 35.0%
AGTTAGTCACTCATCAGATT+AGG - chr5_1:44367956-44367975 None:intergenic 35.0%
!! CAATAAACAGTGGATTGAAG+AGG + chr5_1:44367983-44368002 Msa0732250:intron 35.0%
CAATGTCAAAGAAATGACAG+TGG + chr5_1:44368023-44368042 Msa0732250:intron 35.0%
GTCAATTAAAGAAAAGGAGG+AGG + chr5_1:44368382-44368401 Msa0732250:intron 35.0%
ACGATTGGATCAAGATCAAA+TGG + chr5_1:44368472-44368491 Msa0732250:CDS 35.0%
CAGGAAAAATAGTGTAAAGC+AGG - chr5_1:44368652-44368671 None:intergenic 35.0%
! CATAAACAAAAAGCACATGC+AGG - chr5_1:44368671-44368690 None:intergenic 35.0%
!!! GATTTTGAGTTTATCTTCCG+AGG + chr5_1:44369068-44369087 Msa0732250:CDS 35.0%
CTTCACCATGCAGATAATTT+GGG - chr5_1:44369094-44369113 None:intergenic 35.0%
ACTTCACCATGCAGATAATT+TGG - chr5_1:44369095-44369114 None:intergenic 35.0%
ATTCCTACATGGTCAAAATC+TGG + chr5_1:44369167-44369186 Msa0732250:CDS 35.0%
TTCCTACATGGTCAAAATCT+GGG + chr5_1:44369168-44369187 Msa0732250:CDS 35.0%
!!! TTAATCTCAGGTTTTGGACA+GGG - chr5_1:44369221-44369240 None:intergenic 35.0%
!!! ATTAATCTCAGGTTTTGGAC+AGG - chr5_1:44369222-44369241 None:intergenic 35.0%
CCTGAGATTAATTGTGATCA+CGG + chr5_1:44369230-44369249 Msa0732250:CDS 35.0%
AATGAAACTTCAAGATGCAG+AGG + chr5_1:44369331-44369350 Msa0732250:CDS 35.0%
! CAACTTTTTGTACTGTCCTA+GGG + chr5_1:44369454-44369473 Msa0732250:CDS 35.0%
GATCTTCATCACGATGATTT+AGG + chr5_1:44369482-44369501 Msa0732250:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5_1:44369539-44369558 None:intergenic 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5_1:44369561-44369580 Msa0732250:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5_1:44369562-44369581 Msa0732250:CDS 35.0%
!!! CAAGTCACTTTTGGATGTTA+AGG + chr5_1:44369634-44369653 Msa0732250:CDS 35.0%
AACAGAAAAACAGAAAGCAG+GGG - chr5_1:44369782-44369801 None:intergenic 35.0%
CAACAGAAAAACAGAAAGCA+GGG - chr5_1:44369783-44369802 None:intergenic 35.0%
AATGTGCACCAATTCTTTAC+TGG + chr5_1:44369952-44369971 Msa0732250:CDS 35.0%
ATGTGCACCAATTCTTTACT+GGG + chr5_1:44369953-44369972 Msa0732250:CDS 35.0%
TTGTGTACCCAGTAAAGAAT+TGG - chr5_1:44369963-44369982 None:intergenic 35.0%
TCTTTACTGGGTACACAAAT+TGG + chr5_1:44369965-44369984 Msa0732250:CDS 35.0%
! TATTGCTTATGGATTTGCTC+AGG + chr5_1:44370197-44370216 Msa0732250:CDS 35.0%
! CATTCTAGAAAAAACAGTCC+AGG - chr5_1:44370301-44370320 None:intergenic 35.0%
ACTATCAGCTCTTAATGCAA+TGG - chr5_1:44370423-44370442 None:intergenic 35.0%
TCATATTGCTGAAGCAAAAC+TGG + chr5_1:44370874-44370893 Msa0732250:CDS 35.0%
!! GAAAATAGTTTGTTGGTTGG+TGG + chr5_1:44370998-44371017 Msa0732250:CDS 35.0%
!! AAATAGTTTGTTGGTTGGTG+GGG + chr5_1:44371000-44371019 Msa0732250:CDS 35.0%
!!! GTGCTCTTTGGGATATTTTT+CGG + chr5_1:44371035-44371054 Msa0732250:CDS 35.0%
ACTAACTTTACCTCCTTTAC+AGG - chr5_1:44371133-44371152 None:intergenic 35.0%
TTAATGACTCCAGTTAACAG+GGG - chr5_1:44371187-44371206 None:intergenic 35.0%
CATTAATGACTCCAGTTAAC+AGG - chr5_1:44371189-44371208 None:intergenic 35.0%
! TTTTTCACATTTTGCTGCCA+CGG + chr5_1:44371269-44371288 Msa0732250:intron 35.0%
TAGGTGAGACTAAACTATGA+AGG - chr5_1:44371423-44371442 None:intergenic 35.0%
AAGGTCTCTACAAAAAGAGT+GGG - chr5_1:44371664-44371683 None:intergenic 35.0%
TAAGTTCTGCCTAGCTTAAA+AGG + chr5_1:44371871-44371890 Msa0732250:intron 35.0%
GCTTCTTTATGTAGATGACT+CGG + chr5_1:44372335-44372354 Msa0732250:intron 35.0%
TAAAAGGTCTGATCATGGAT+GGG - chr5_1:44372436-44372455 None:intergenic 35.0%
ATAAAAGGTCTGATCATGGA+TGG - chr5_1:44372437-44372456 None:intergenic 35.0%
! CAGACCTTTTATCTAACCAT+CGG + chr5_1:44372445-44372464 Msa0732250:CDS 35.0%
! AGACCTTTTATCTAACCATC+GGG + chr5_1:44372446-44372465 Msa0732250:CDS 35.0%
AAAAAGCTGAAGGAAGAGTA+TGG + chr5_1:44372475-44372494 Msa0732250:CDS 35.0%
TTTGTGGAGTGTAGATCAAT+AGG + chr5_1:44372532-44372551 Msa0732250:intron 35.0%
TTGTGGAGTGTAGATCAATA+GGG + chr5_1:44372533-44372552 Msa0732250:intron 35.0%
!! TTCAACACTGACTTGTATGT+AGG + chr5_1:44372576-44372595 Msa0732250:intron 35.0%
TCTACACTTCTTAGCAAACA+AGG - chr5_1:44372738-44372757 None:intergenic 35.0%
ATGTCCTAGTAGTTGTATAC+TGG + chr5_1:44372907-44372926 Msa0732250:intron 35.0%
CATTATTACAACAAGGTCCT+AGG + chr5_1:44373035-44373054 Msa0732250:intron 35.0%
!! TGTGTGTCGGTTATGTAAAA+TGG + chr5_1:44373163-44373182 Msa0732250:intron 35.0%
!! GTGTGTCGGTTATGTAAAAT+GGG + chr5_1:44373164-44373183 Msa0732250:intron 35.0%
TGGGAAAGACATGAAAGAAT+TGG + chr5_1:44373183-44373202 Msa0732250:intron 35.0%
GTTATTGGGACTCAAAATCA+TGG + chr5_1:44373228-44373247 Msa0732250:intron 35.0%
TATATGAATCCCTTCTCCTA+AGG + chr5_1:44373337-44373356 Msa0732250:intron 35.0%
TTGATCTAACCTTAGGAGAA+GGG - chr5_1:44373349-44373368 None:intergenic 35.0%
ATTGATCTAACCTTAGGAGA+AGG - chr5_1:44373350-44373369 None:intergenic 35.0%
AATTCTATGCTCACATCCAT+AGG - chr5_1:44373471-44373490 None:intergenic 35.0%
ATCTAGACGTCTAGATGATA+TGG - chr5_1:44373564-44373583 None:intergenic 35.0%
CATTAACTTCAGTGACTCAT+TGG - chr5_1:44373655-44373674 None:intergenic 35.0%
TAAAGTGAGCTAGTGAGTAA+TGG - chr5_1:44373780-44373799 None:intergenic 35.0%
TTTGTCTCTCCTGAAAATGT+TGG + chr5_1:44373859-44373878 Msa0732250:CDS 35.0%
AACATGACAGTGCCAAAAAT+AGG - chr5_1:44374021-44374040 None:intergenic 35.0%
! AATCTCTGAACATTTGTTGG+TGG + chr5_1:44374052-44374071 Msa0732250:intron 35.0%
!! ATTGCTGCTTCTTTTGTAAC+AGG + chr5_1:44374336-44374355 Msa0732250:intron 35.0%
CGTATATGCTATGATTGATG+TGG + chr5_1:44374372-44374391 Msa0732250:CDS 35.0%
GATTGATGTGGTCAAAAAGT+TGG + chr5_1:44374384-44374403 Msa0732250:CDS 35.0%
TCAAAAAGTTGGAGAAAGCA+AGG + chr5_1:44374395-44374414 Msa0732250:CDS 35.0%
CAACAACAACACATTCACGA+CGG + chr5_1:44367421-44367440 Msa0732250:CDS 40.0%
AACAACAACACATTCACGAC+GGG + chr5_1:44367422-44367441 Msa0732250:CDS 40.0%
AAAGAGACTCAGAACAAACG+CGG + chr5_1:44367481-44367500 Msa0732250:CDS 40.0%
TTGACTCTTTCGAACAGCAA+CGG - chr5_1:44367582-44367601 None:intergenic 40.0%
! TTGCTGTTCGAAAGAGTCAA+CGG + chr5_1:44367582-44367601 Msa0732250:CDS 40.0%
AACAATAAATGCTCCCGTCT+TGG + chr5_1:44367616-44367635 Msa0732250:CDS 40.0%
TTCTTCTTGTCTACCAAGAC+GGG - chr5_1:44367632-44367651 None:intergenic 40.0%
ACAATTTCTCCGAAGAAACC+CGG + chr5_1:44367695-44367714 Msa0732250:CDS 40.0%
! GGAGTCTGTTTTCTTTTTCC+GGG - chr5_1:44367716-44367735 None:intergenic 40.0%
GATGTTGTGACCTTATTGTG+AGG - chr5_1:44367737-44367756 None:intergenic 40.0%
TCAAAGAAATGACAGTGGCA+GGG + chr5_1:44368028-44368047 Msa0732250:intron 40.0%
TCAGATGCACCAAATGCAAA+CGG + chr5_1:44368054-44368073 Msa0732250:CDS 40.0%
! AAGGTATCCTCGATTGAAAG+AGG + chr5_1:44368183-44368202 Msa0732250:intron 40.0%
AGTTGTTCCTCTTTCAATCG+AGG - chr5_1:44368193-44368212 None:intergenic 40.0%
! GCAAAGCTTGTTTGAAGTCA+CGG + chr5_1:44368251-44368270 Msa0732250:CDS 40.0%
TCAAGATCAAATGGCTGAGA+AGG + chr5_1:44368481-44368500 Msa0732250:CDS 40.0%
GAGATAGAAGCCAAGATACA+AGG + chr5_1:44368503-44368522 Msa0732250:CDS 40.0%
TACATGCGCTCATCATTATG+GGG - chr5_1:44368839-44368858 None:intergenic 40.0%
GTACATGCGCTCATCATTAT+GGG - chr5_1:44368840-44368859 None:intergenic 40.0%
AGTACATGCGCTCATCATTA+TGG - chr5_1:44368841-44368860 None:intergenic 40.0%
ATAATGATGAGCGCATGTAC+TGG + chr5_1:44368840-44368859 Msa0732250:CDS 40.0%
! TGTACTGGTAGGGACTTATT+TGG + chr5_1:44368855-44368874 Msa0732250:intron 40.0%
TTTGACCATGTAGGAATCTC+AGG - chr5_1:44369164-44369183 None:intergenic 40.0%
CCGTGATCACAATTAATCTC+AGG - chr5_1:44369233-44369252 None:intergenic 40.0%
ACTAACTCAGAGATGCATTC+TGG - chr5_1:44369284-44369303 None:intergenic 40.0%
! GCTCTTGTTTGAATCCTGTT+AGG + chr5_1:44369372-44369391 Msa0732250:CDS 40.0%
AGCTCTTTGCAAAGAATCCA+GGG + chr5_1:44369430-44369449 Msa0732250:CDS 40.0%
! GCAACTTTTTGTACTGTCCT+AGG + chr5_1:44369453-44369472 Msa0732250:CDS 40.0%
! TAGGACATTTTCAATGGCAC+TGG + chr5_1:44369501-44369520 Msa0732250:CDS 40.0%
AGGCACTTGATTGCTTAGAT+TGG + chr5_1:44369654-44369673 Msa0732250:CDS 40.0%
TGATCTTTGAGCTTCTCATG+CGG + chr5_1:44369729-44369748 Msa0732250:intron 40.0%
CCAACAGAAAAACAGAAAGC+AGG - chr5_1:44369784-44369803 None:intergenic 40.0%
!! CCTGCTTTCTGTTTTTCTGT+TGG + chr5_1:44369781-44369800 Msa0732250:intron 40.0%
GGCCAATTCTGTTTATCCTT+GGG - chr5_1:44369991-44370010 None:intergenic 40.0%
AGGCCAATTCTGTTTATCCT+TGG - chr5_1:44369992-44370011 None:intergenic 40.0%
!! AGGTTAAGAGCACCTTTGAA+AGG - chr5_1:44370123-44370142 None:intergenic 40.0%
!! TCTGGCTTTAGAACTTCATC+AGG - chr5_1:44370159-44370178 None:intergenic 40.0%
!! TGAAGTTCTAAAGCCAGACA+TGG + chr5_1:44370161-44370180 Msa0732250:CDS 40.0%
!! GAAGTTCTAAAGCCAGACAT+GGG + chr5_1:44370162-44370181 Msa0732250:CDS 40.0%
!!! TATGTTTTTGGTCCCATGTC+TGG - chr5_1:44370177-44370196 None:intergenic 40.0%
GATGTATACGATGCCTTTGT+AGG + chr5_1:44370397-44370416 Msa0732250:intron 40.0%
CTTAATGCAATGGCCTACAA+AGG - chr5_1:44370413-44370432 None:intergenic 40.0%
CATCAGATGCATTGTCTTTC+CGG + chr5_1:44370672-44370691 Msa0732250:intron 40.0%
CTACATGGTGATATTCAGGA+TGG + chr5_1:44370962-44370981 Msa0732250:CDS 40.0%
ATTCCTTAGATGGTGCTCTT+TGG + chr5_1:44371023-44371042 Msa0732250:CDS 40.0%
TTCCTTAGATGGTGCTCTTT+GGG + chr5_1:44371024-44371043 Msa0732250:CDS 40.0%
!! TTGGGATATTTTTCGGAGAG+AGG + chr5_1:44371042-44371061 Msa0732250:CDS 40.0%
TTCAGATATTCCTGCAATGC+AGG - chr5_1:44371073-44371092 None:intergenic 40.0%
!! AGAAGCATTTCAGAGAGTTC+AGG + chr5_1:44371092-44371111 Msa0732250:CDS 40.0%
TAATGACTCCAGTTAACAGG+GGG - chr5_1:44371186-44371205 None:intergenic 40.0%
TGTCAACTTTATCATGTCCG+TGG - chr5_1:44371289-44371308 None:intergenic 40.0%
GCCCCATAGAACATATTACA+AGG - chr5_1:44371401-44371420 None:intergenic 40.0%
!! TTAGTCTCACCTAGCTTTGA+AGG + chr5_1:44371430-44371449 Msa0732250:intron 40.0%
CTGCAGGATACCTTCATTAT+GGG - chr5_1:44371575-44371594 None:intergenic 40.0%
ACTGCAGGATACCTTCATTA+TGG - chr5_1:44371576-44371595 None:intergenic 40.0%
CAAGGTCTCTACAAAAAGAG+TGG - chr5_1:44371665-44371684 None:intergenic 40.0%
AGAACTTACCAATGTGTTGC+AGG - chr5_1:44371859-44371878 None:intergenic 40.0%
! TAGGGAAGTGCAATCTGTTA+TGG - chr5_1:44371926-44371945 None:intergenic 40.0%
ATTACCAGCTTGATCATTCG+AGG - chr5_1:44372109-44372128 None:intergenic 40.0%
AATACGGACCATCATGAGTA+TGG + chr5_1:44372157-44372176 Msa0732250:intron 40.0%
GATGTAATTTCCAGTCCCTT+AGG + chr5_1:44372239-44372258 Msa0732250:intron 40.0%
AAAGTTCACTTGGCAGTAGA+CGG + chr5_1:44372311-44372330 Msa0732250:intron 40.0%
GACATCTCCTTTGGCATTAT+AGG + chr5_1:44372402-44372421 Msa0732250:intron 40.0%
AAAAGGTCTGATCATGGATG+GGG - chr5_1:44372435-44372454 None:intergenic 40.0%
ATGCCCGATGGTTAGATAAA+AGG - chr5_1:44372452-44372471 None:intergenic 40.0%
!! TGTATGTAGGTATTGAGCCT+TGG + chr5_1:44372589-44372608 Msa0732250:intron 40.0%
AGCTTCTGAACAAAAGTCCA+AGG - chr5_1:44372609-44372628 None:intergenic 40.0%
! TGGACTTTTGTTCAGAAGCT+TGG + chr5_1:44372609-44372628 Msa0732250:CDS 40.0%
TTACCTTCAGATTTCGGACT+TGG - chr5_1:44372668-44372687 None:intergenic 40.0%
GAAGGTAAAACTTGCGTACA+TGG + chr5_1:44372680-44372699 Msa0732250:intron 40.0%
GAACAGGAACACACTTAACA+GGG - chr5_1:44373272-44373291 None:intergenic 40.0%
AGAACAGGAACACACTTAAC+AGG - chr5_1:44373273-44373292 None:intergenic 40.0%
GTTACAAGACAAGACAGAAC+AGG - chr5_1:44373288-44373307 None:intergenic 40.0%
TTAAACATTCCTAATGGGGG+AGG + chr5_1:44373429-44373448 Msa0732250:intron 40.0%
TAAACATTCCTAATGGGGGA+GGG + chr5_1:44373430-44373449 Msa0732250:intron 40.0%
TCTAGATCGTTACTCGAGTA+GGG + chr5_1:44373577-44373596 Msa0732250:intron 40.0%
GAGGCTATGCTATATCCATT+TGG - chr5_1:44373615-44373634 None:intergenic 40.0%
!! GAGCTAGTGAGTAATGGATT+GGG - chr5_1:44373774-44373793 None:intergenic 40.0%
!! TGAGCTAGTGAGTAATGGAT+TGG - chr5_1:44373775-44373794 None:intergenic 40.0%
!! CATTTTTCAGTCATGCACCA+AGG + chr5_1:44373825-44373844 Msa0732250:intron 40.0%
GACAAAATCAAGAGCAACCT+TGG - chr5_1:44373845-44373864 None:intergenic 40.0%
! AAGCACTCACCAACATTTTC+AGG - chr5_1:44373871-44373890 None:intergenic 40.0%
TGTGATTTACTGGAAGTTGG+CGG - chr5_1:44373912-44373931 None:intergenic 40.0%
ACCTGTGATTTACTGGAAGT+TGG - chr5_1:44373915-44373934 None:intergenic 40.0%
TCTATGGACCTGTGATTTAC+TGG - chr5_1:44373922-44373941 None:intergenic 40.0%
AGTAAATCACAGGTCCATAG+AGG + chr5_1:44373921-44373940 Msa0732250:CDS 40.0%
TACCTCCAATTTGTCCTCTA+TGG - chr5_1:44373938-44373957 None:intergenic 40.0%
ACAACAACACATTCACGACG+GGG + chr5_1:44367423-44367442 Msa0732250:CDS 45.0%
AAGAGACTCAGAACAAACGC+GGG + chr5_1:44367482-44367501 Msa0732250:CDS 45.0%
GGAAGAAGAAGCAGCTTCAT+CGG - chr5_1:44367561-44367580 None:intergenic 45.0%
ACATTGATGCGTGTCTGACA+CGG + chr5_1:44367923-44367942 Msa0732250:intron 45.0%
GTCAAAGAAATGACAGTGGC+AGG + chr5_1:44368027-44368046 Msa0732250:intron 45.0%
!! GAAAGAGGAACAACTTGCTG+AGG + chr5_1:44368198-44368217 Msa0732250:CDS 45.0%
GGAAACCAACGATCATCATC+AGG + chr5_1:44368403-44368422 Msa0732250:CDS 45.0%
! CTCAACCTGATGATGATCGT+TGG - chr5_1:44368411-44368430 None:intergenic 45.0%
AGCATTCTGTGCAGCTTCTA+TGG - chr5_1:44368977-44368996 None:intergenic 45.0%
CATGCAGATAATTTGGGCCT+CGG - chr5_1:44369088-44369107 None:intergenic 45.0%
AGCATCAGGTGCTTTGTATC+TGG - chr5_1:44369132-44369151 None:intergenic 45.0%
! AGATACAAAGCACCTGATGC+TGG + chr5_1:44369131-44369150 Msa0732250:CDS 45.0%
!! CACCCAGATTTTGACCATGT+AGG - chr5_1:44369173-44369192 None:intergenic 45.0%
CTACATGGTCAAAATCTGGG+TGG + chr5_1:44369171-44369190 Msa0732250:CDS 45.0%
CAGCTCTTTGCAAAGAATCC+AGG + chr5_1:44369429-44369448 Msa0732250:CDS 45.0%
GCTCTTTGCAAAGAATCCAG+GGG + chr5_1:44369431-44369450 Msa0732250:CDS 45.0%
ACAGTACAAAAAGTTGCCCC+TGG - chr5_1:44369450-44369469 None:intergenic 45.0%
TGATGAAGATCTACAGCCCT+AGG - chr5_1:44369473-44369492 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5_1:44369509-44369528 Msa0732250:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5_1:44369510-44369529 Msa0732250:CDS 45.0%
AATGCACGCCACATGACAAA+CGG - chr5_1:44369590-44369609 None:intergenic 45.0%
TGATTGCTTAGATTGGTGCG+AGG + chr5_1:44369661-44369680 Msa0732250:CDS 45.0%
GGCCCAAGGATAAACAGAAT+TGG + chr5_1:44369986-44370005 Msa0732250:CDS 45.0%
AAGTTTACCGCGTCATTGTG+CGG + chr5_1:44370059-44370078 Msa0732250:CDS 45.0%
ATAAACTCCGCACAATGACG+CGG - chr5_1:44370069-44370088 None:intergenic 45.0%
! TATGGATTTGCTCAGGAGCT+TGG + chr5_1:44370204-44370223 Msa0732250:CDS 45.0%
CTGCATCGGACATATCACAA+TGG - chr5_1:44370254-44370273 None:intergenic 45.0%
CGGAAAGACAATGCATCTGA+TGG - chr5_1:44370674-44370693 None:intergenic 45.0%
CTGAAGCAAAACTGGATCGT+GGG + chr5_1:44370882-44370901 Msa0732250:CDS 45.0%
GGAGCTACATGGTGATATTC+AGG + chr5_1:44370958-44370977 Msa0732250:CDS 45.0%
!! ATCCCAAAGAGCACCATCTA+AGG - chr5_1:44371029-44371048 None:intergenic 45.0%
TGTCCATTGCTCTCCTGTAA+AGG + chr5_1:44371117-44371136 Msa0732250:CDS 45.0%
TTTGGATACCCCCTGTTAAC+TGG + chr5_1:44371175-44371194 Msa0732250:intron 45.0%
GTGCTACATCCTTCAAAGCT+AGG - chr5_1:44371442-44371461 None:intergenic 45.0%
CTCTACAAAAAGAGTGGGCA+AGG - chr5_1:44371659-44371678 None:intergenic 45.0%
GAGAGATTTGGGTAGACAGA+AGG - chr5_1:44371766-44371785 None:intergenic 45.0%
TGTTCAGTCCTGCAACACAT+TGG + chr5_1:44371848-44371867 Msa0732250:intron 45.0%
! GTGCTGGATCCTTTTAAGCT+AGG - chr5_1:44371883-44371902 None:intergenic 45.0%
AAGGATCCAGCACACTTTGT+TGG + chr5_1:44371890-44371909 Msa0732250:intron 45.0%
AGGATCCAGCACACTTTGTT+GGG + chr5_1:44371891-44371910 Msa0732250:intron 45.0%
CTACTGAATCGGTGACCTAA+GGG - chr5_1:44372257-44372276 None:intergenic 45.0%
TCTACTGAATCGGTGACCTA+AGG - chr5_1:44372258-44372277 None:intergenic 45.0%
AAGTTCACTTGGCAGTAGAC+GGG + chr5_1:44372312-44372331 Msa0732250:intron 45.0%
!! CAGCTTTTTCTTATGCCCGA+TGG - chr5_1:44372464-44372483 None:intergenic 45.0%
CGGGCATAAGAAAAAGCTGA+AGG + chr5_1:44372465-44372484 Msa0732250:CDS 45.0%
! GATGCAGTTTTCATTCCAGC+TGG + chr5_1:44372633-44372652 Msa0732250:CDS 45.0%
!! TTCAGATTTCGGACTTGGTG+GGG - chr5_1:44372663-44372682 None:intergenic 45.0%
! CTTCAGATTTCGGACTTGGT+GGG - chr5_1:44372664-44372683 None:intergenic 45.0%
GGTAAAACTTGCGTACATGG+TGG + chr5_1:44372683-44372702 Msa0732250:intron 45.0%
AAACATTCCTAATGGGGGAG+GGG + chr5_1:44373431-44373450 Msa0732250:intron 45.0%
! GGTTTGGGATTTGGTTCCTA+TGG + chr5_1:44373452-44373471 Msa0732250:intron 45.0%
GTCTAGATCGTTACTCGAGT+AGG + chr5_1:44373576-44373595 Msa0732250:intron 45.0%
GGGTGACAATTGTAGCCAAA+TGG + chr5_1:44373597-44373616 Msa0732250:intron 45.0%
GCCAACTTCCAGTAAATCAC+AGG + chr5_1:44373911-44373930 Msa0732250:CDS 45.0%
CAGGTCCATAGAGGACAAAT+TGG + chr5_1:44373930-44373949 Msa0732250:CDS 45.0%
GTCCATAGAGGACAAATTGG+AGG + chr5_1:44373933-44373952 Msa0732250:CDS 45.0%
! GGAGGTATGCCTGACTATTA+TGG + chr5_1:44373951-44373970 Msa0732250:intron 45.0%
!! AGAAAAAATAAATATAAATA+TGG + chr5_1:44372823-44372842 Msa0732250:intron 5.0%
AGAAGAAGCAGCTTCATCGG+TGG - chr5_1:44367558-44367577 None:intergenic 50.0%
CATTGATGCGTGTCTGACAC+GGG + chr5_1:44367924-44367943 Msa0732250:intron 50.0%
ATTGATGCGTGTCTGACACG+GGG + chr5_1:44367925-44367944 Msa0732250:intron 50.0%
TTGCAGTTACCACAGCAGAC+AGG - chr5_1:44368229-44368248 None:intergenic 50.0%
GATCTTGGGATCAACGTTGC+AGG + chr5_1:44368776-44368795 Msa0732250:intron 50.0%
! TGATGAGCGCATGTACTGGT+AGG + chr5_1:44368844-44368863 Msa0732250:intron 50.0%
! GATGAGCGCATGTACTGGTA+GGG + chr5_1:44368845-44368864 Msa0732250:intron 50.0%
CGAGGCCCAAATTATCTGCA+TGG + chr5_1:44369086-44369105 Msa0732250:CDS 50.0%
CCATGTAGGAATCTCAGGCT+GGG - chr5_1:44369159-44369178 None:intergenic 50.0%
ACCATGTAGGAATCTCAGGC+TGG - chr5_1:44369160-44369179 None:intergenic 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5_1:44369511-44369530 Msa0732250:CDS 50.0%
ACAGAAAGCAGGGGATGCAA+GGG - chr5_1:44369773-44369792 None:intergenic 50.0%
AACAGAAAGCAGGGGATGCA+AGG - chr5_1:44369774-44369793 None:intergenic 50.0%
TGGGTACACAAATTGGCCCA+AGG + chr5_1:44369972-44369991 Msa0732250:CDS 50.0%
! GATTTGCTCAGGAGCTTGGA+CGG + chr5_1:44370208-44370227 Msa0732250:CDS 50.0%
ATTTGCTCAGGAGCTTGGAC+GGG + chr5_1:44370209-44370228 Msa0732250:CDS 50.0%
GCTGAAGCAAAACTGGATCG+TGG + chr5_1:44370881-44370900 Msa0732250:CDS 50.0%
AGCACCTTGAGCAAGACAAG+AGG + chr5_1:44370936-44370955 Msa0732250:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG + chr5_1:44370937-44370956 Msa0732250:CDS 50.0%
CAAGACAAGAGGGAGCTACA+TGG + chr5_1:44370947-44370966 Msa0732250:CDS 50.0%
! GTTGGTGGGGATTCCTTAGA+TGG + chr5_1:44371013-44371032 Msa0732250:CDS 50.0%
CCTCCTTTACAGGAGAGCAA+TGG - chr5_1:44371123-44371142 None:intergenic 50.0%
CCATTGCTCTCCTGTAAAGG+AGG + chr5_1:44371120-44371139 Msa0732250:CDS 50.0%
!! ATGAAGGTATCCTGCAGTGC+TGG + chr5_1:44371578-44371597 Msa0732250:intron 50.0%
ATCGCATTGCCTATTGCCTG+CGG + chr5_1:44371618-44371637 Msa0732250:intron 50.0%
GTAGAAAGAATCAACGCCGC+AGG - chr5_1:44371637-44371656 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr5_1:44371688-44371707 None:intergenic 50.0%
GTTGCAGGACTGAACAACCA+AGG - chr5_1:44371844-44371863 None:intergenic 50.0%
GGATCCAGCACACTTTGTTG+GGG + chr5_1:44371892-44371911 Msa0732250:intron 50.0%
GATCCAGCACACTTTGTTGG+GGG + chr5_1:44371893-44371912 Msa0732250:intron 50.0%
TTTCCCCCAACAAAGTGTGC+TGG - chr5_1:44371899-44371918 None:intergenic 50.0%
CATGCCTCGAATGATCAAGC+TGG + chr5_1:44372102-44372121 Msa0732250:intron 50.0%
AGTTCACTTGGCAGTAGACG+GGG + chr5_1:44372313-44372332 Msa0732250:intron 50.0%
! ATGACTCGGCAGTCTGATGA+CGG + chr5_1:44372349-44372368 Msa0732250:intron 50.0%
!! TCAGATTTCGGACTTGGTGG+GGG - chr5_1:44372662-44372681 None:intergenic 50.0%
CCTTCAGATTTCGGACTTGG+TGG - chr5_1:44372665-44372684 None:intergenic 50.0%
CCACCAAGTCCGAAATCTGA+AGG + chr5_1:44372662-44372681 Msa0732250:CDS 50.0%
TTAACAGGGCTGGGTTATGC+TGG - chr5_1:44373258-44373277 None:intergenic 50.0%
GGAACACACTTAACAGGGCT+GGG - chr5_1:44373267-44373286 None:intergenic 50.0%
AGGAACACACTTAACAGGGC+TGG - chr5_1:44373268-44373287 None:intergenic 50.0%
TGAGTGCTTCCGTTTGACAG+AGG + chr5_1:44373882-44373901 Msa0732250:CDS 50.0%
GGCGGAATTCCTCTGTCAAA+CGG - chr5_1:44373894-44373913 None:intergenic 50.0%
ACTCAGAACAAACGCGGGAG+CGG + chr5_1:44367487-44367506 Msa0732250:CDS 55.0%
CACGGCAACAGAGGAGACAA+AGG - chr5_1:44369007-44369026 None:intergenic 55.0%
AACGAAGCTCACGGCAACAG+AGG - chr5_1:44369016-44369035 None:intergenic 55.0%
TGTTGCCGTGAGCTTCGTTG+TGG + chr5_1:44369017-44369036 Msa0732250:CDS 55.0%
GTTGCCGTGAGCTTCGTTGT+GGG + chr5_1:44369018-44369037 Msa0732250:CDS 55.0%
CTTCGTTGTGGGCAGCTTCT+AGG + chr5_1:44369029-44369048 Msa0732250:CDS 55.0%
GTTGTGGGCAGCTTCTAGGT+GGG + chr5_1:44369033-44369052 Msa0732250:CDS 55.0%
TTGTGGGCAGCTTCTAGGTG+GGG + chr5_1:44369034-44369053 Msa0732250:CDS 55.0%
CCCAGCCTGAGATTCCTACA+TGG + chr5_1:44369156-44369175 Msa0732250:CDS 55.0%
! GGGTGGCATGCTGATAGTGA+CGG + chr5_1:44369188-44369207 Msa0732250:CDS 55.0%
CATCAGGCAGCTTCACAGCA+AGG - chr5_1:44370143-44370162 None:intergenic 55.0%
TTTGCTCAGGAGCTTGGACG+GGG + chr5_1:44370210-44370229 Msa0732250:CDS 55.0%
GACGGGGTGATTCAGTGACT+AGG + chr5_1:44370226-44370245 Msa0732250:CDS 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG - chr5_1:44370943-44370962 None:intergenic 55.0%
AGAGGACGTACCTGCATTGC+AGG + chr5_1:44371060-44371079 Msa0732250:CDS 55.0%
!! GTATCCTGCAGTGCTGGTCT+GGG + chr5_1:44371584-44371603 Msa0732250:intron 55.0%
! GTGCTGGTCTGGGTTTGTCT+AGG + chr5_1:44371594-44371613 Msa0732250:intron 55.0%
GAATCAACGCCGCAGGCAAT+AGG - chr5_1:44371630-44371649 None:intergenic 55.0%
! GAGAGAGAGAGAGAGGCACA+AGG - chr5_1:44371683-44371702 None:intergenic 55.0%
GAATCGGTGACCTAAGGGAC+TGG - chr5_1:44372252-44372271 None:intergenic 55.0%
TTCCTAATGGGGGAGGGGTT+TGG + chr5_1:44373436-44373455 Msa0732250:intron 55.0%
TCCTAATGGGGGAGGGGTTT+GGG + chr5_1:44373437-44373456 Msa0732250:intron 55.0%
GAGGCATGTCCTGTCTGCTG+TGG + chr5_1:44368217-44368236 Msa0732250:CDS 60.0%
GCTGCCCACAACGAAGCTCA+CGG - chr5_1:44369025-44369044 None:intergenic 60.0%
CGTTGTGGGCAGCTTCTAGG+TGG + chr5_1:44369032-44369051 Msa0732250:CDS 60.0%
GCTGGGAGCCGTTTGTCATG+TGG + chr5_1:44369579-44369598 Msa0732250:CDS 60.0%
!! GGTATCCTGCAGTGCTGGTC+TGG + chr5_1:44371583-44371602 Msa0732250:intron 60.0%
CAAACCCAGACCAGCACTGC+AGG - chr5_1:44371591-44371610 None:intergenic 60.0%
TCCCAAACCCCTCCCCCATT+AGG - chr5_1:44373441-44373460 None:intergenic 60.0%
! TGGGGGAGGGGTTTGGGATT+TGG + chr5_1:44373443-44373462 Msa0732250:intron 60.0%
CAGAACAAACGCGGGAGCGG+TGG + chr5_1:44367490-44367509 Msa0732250:CDS 65.0%
AACAAACGCGGGAGCGGTGG+CGG + chr5_1:44367493-44367512 Msa0732250:CDS 65.0%
TCAGGCTGGGCACCAGCATC+AGG - chr5_1:44369146-44369165 None:intergenic 65.0%
! ACTTGGTGGGGGCAACCAGC+TGG - chr5_1:44372651-44372670 None:intergenic 65.0%
! AAACGCGGGAGCGGTGGCGG+AGG + chr5_1:44367496-44367515 Msa0732250:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 44367395 44374426 44367395 ID=Msa0732250;Name=Msa0732250
chr5_1 mRNA 44367395 44374426 44367395 ID=Msa0732250-mRNA-1;Parent=Msa0732250;Name=Msa0732250-mRNA-1;_AED=0.08;_eAED=0.10;_QI=0|0|0|0.91|1|1|12|0|809
chr5_1 exon 44367395 44367764 44367395 ID=Msa0732250-mRNA-1:exon:12581;Parent=Msa0732250-mRNA-1
chr5_1 exon 44368034 44368088 44368034 ID=Msa0732250-mRNA-1:exon:12582;Parent=Msa0732250-mRNA-1
chr5_1 exon 44368186 44368285 44368186 ID=Msa0732250-mRNA-1:exon:12583;Parent=Msa0732250-mRNA-1
chr5_1 exon 44368383 44368524 44368383 ID=Msa0732250-mRNA-1:exon:12584;Parent=Msa0732250-mRNA-1
chr5_1 exon 44368798 44368861 44368798 ID=Msa0732250-mRNA-1:exon:12585;Parent=Msa0732250-mRNA-1
chr5_1 exon 44368944 44369682 44368944 ID=Msa0732250-mRNA-1:exon:12586;Parent=Msa0732250-mRNA-1
chr5_1 exon 44369943 44370272 44369943 ID=Msa0732250-mRNA-1:exon:12587;Parent=Msa0732250-mRNA-1
chr5_1 exon 44370860 44371141 44370860 ID=Msa0732250-mRNA-1:exon:12588;Parent=Msa0732250-mRNA-1
chr5_1 exon 44372424 44372496 44372424 ID=Msa0732250-mRNA-1:exon:12589;Parent=Msa0732250-mRNA-1
chr5_1 exon 44372598 44372683 44372598 ID=Msa0732250-mRNA-1:exon:12590;Parent=Msa0732250-mRNA-1
chr5_1 exon 44373835 44373954 44373835 ID=Msa0732250-mRNA-1:exon:12591;Parent=Msa0732250-mRNA-1
chr5_1 exon 44374358 44374426 44374358 ID=Msa0732250-mRNA-1:exon:12592;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44367395 44367764 44367395 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44368034 44368088 44368034 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44368186 44368285 44368186 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44368383 44368524 44368383 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44368798 44368861 44368798 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44368944 44369682 44368944 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44369943 44370272 44369943 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44370860 44371141 44370860 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44372424 44372496 44372424 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44372598 44372683 44372598 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44373835 44373954 44373835 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
chr5_1 CDS 44374358 44374426 44374358 ID=Msa0732250-mRNA-1:cds;Parent=Msa0732250-mRNA-1
Gene Sequence

>Msa0732250

ATGGCGTTTGCGAGGGAACAAGAAGACAACAACAACACATTCACGACGGGGATTAACAAGCCTCCTATCCATTATGTCTATTCTAGAAAGAGACTCAGAACAAACGCGGGAGCGGTGGCGGAGGAGTTAGCTAAGAACGAAGAACAACAACAACAACAAACCACCGATGAAGCTGCTTCTTCTTCCGTTGCTGTTCGAAAGAGTCAACGGATAAGAAGAACAACAATAAATGCTCCCGTCTTGGTAGACAAGAAGAAAAAGAAGAAGAAGAATCTTGGTGATGGTGCTGAGAAAACCAACACAATTTCTCCGAAGAAACCCGGAAAAAGAAAACAGACTCCTCACAATAAGGTCACAACATCTTCTTCTAAAATGACAGTGGCAGGGTTGTCAGATGCACCAAATGCAAACGGAAAAGATATTGTGTATCCTCGATTGAAAGAGGAACAACTTGCTGAGGCATGTCCTGTCTGCTGTGGTAACTGCAATTGCAAAGCTTGTTTGAAGTCACGGAAACTAATCGATTCAATTAAAGAAAAGGAGGAGGAAACCAACGATCATCATCAGGTTGAGCGCTCCAAGTATATACTCAAAGCTCTTCTTCCACATTTAATACGATTGGATCAAGATCAAATGGCTGAGAAGGAGATAGAAGCCAAGATACAAGGTCTCTCACTCTCTGAGCTAAAAATTAAAAAATCAAATCCCCATAATGATGAGCGCATGTACTGTGACAACTGCAAAACATCAATATTTGACTACCATAGAAGCTGCACAGAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCCGTGAGCTTCGTTGTGGGCAGCTTCTAGGTGGGGCAGATCCATTTGATTTTGAGTTTATCTTCCGAGGCCCAAATTATCTGCATGGTGAAGTTGCCAAGAAAGTAACCAGATACAAAGCACCTGATGCTGGTGCCCAGCCTGAGATTCCTACATGGTCAAAATCTGGGTGGCATGCTGATAGTGACGGCAATATTCCCTGTCCAAAACCTGAGATTAATTGTGATCACGGTTACCTTGAACTGAAAAGCGTATTTTCGCCAGAATGCATCTCTGAGTTAGTATGTAAAGCAAAGGAACTTGCAGATTCAATGAAACTTCAAGATGCAGAGGTGACTCTTGATAATAGCTGCTCTTGTTTGAATCCTGTTAGGAATAGAGATGATATACACAATAACACAAGGGAAGCAGCTCTTTGCAAAGAATCCAGGGGCAACTTTTTGTACTGTCCTAGGGCTGTAGATCTTCATCACGATGATTTAGGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAGCCGTTTGTCATGTGGCGTGCATTTCATCAGATAAACAAAAACAAGAACAAGTCACTTTTGGATGTTAAGGCACTTGATTGCTTAGATTGGTGCGAGATAGATATTAATGTGCACCAATTCTTTACTGGGTACACAAATTGGCCCAAGGATAAACAGAATTGGCCTCAAGTATTGAAATTGAAAGATTGGCCTCCTTCTAAACTATTTGAAGAAAGTTTACCGCGTCATTGTGCGGAGTTTATATCTTCCTTGCCATTTAAAGAATATACAAATCCTTTCAAAGGTGCTCTTAACCTTGCTGTGAAGCTGCCTGATGAAGTTCTAAAGCCAGACATGGGACCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGACGGGGTGATTCAGTGACTAGGCTCCATTGTGATATGTCCGATGCAGTAAATGTGTTGACTCATATTGCTGAAGCAAAACTGGATCGTGGGAGTATTGACGCAATTAAGAAATTGAAACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATATTCAGGATGGAGAGACCACTGTTGAAAATAGTTTGTTGGTTGGTGGGGATTCCTTAGATGGTGCTCTTTGGGATATTTTTCGGAGAGAGGACGTACCTGCATTGCAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTGTAAAGGAGGTTATTCACCCCATCCATGATCAGACCTTTTATCTAACCATCGGGCATAAGAAAAAGCTGAAGGAAGAGTATGGTATTGAGCCTTGGACTTTTGTTCAGAAGCTTGGAGATGCAGTTTTCATTCCAGCTGGTTGCCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCTCTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTCCGTTTGACAGAGGAATTCCGCCAACTTCCAGTAAATCACAGGTCCATAGAGGACAAATTGGAGGTGAAGAAAATGATCGTATATGCTATGATTGATGTGGTCAAAAAGTTGGAGAAAGCAAGGAGCCAATGA
Protein sequence

>Msa0732250

MAFAREQEDNNNTFTTGINKPPIHYVYSRKRLRTNAGAVAEELAKNEEQQQQQTTDEAASSSVAVRKSQRIRRTTINAPVLVDKKKKKKKNLGDGAEKTNTISPKKPGKRKQTPHNKVTTSSSKMTVAGLSDAPNANGKDIVYPRLKEEQLAEACPVCCGNCNCKACLKSRKLIDSIKEKEEETNDHHQVERSKYILKALLPHLIRLDQDQMAEKEIEAKIQGLSLSELKIKKSNPHNDERMYCDNCKTSIFDYHRSCTECSFDLCLLCCRELRCGQLLGGADPFDFEFIFRGPNYLHGEVAKKVTRYKAPDAGAQPEIPTWSKSGWHADSDGNIPCPKPEINCDHGYLELKSVFSPECISELVCKAKELADSMKLQDAEVTLDNSCSCLNPVRNRDDIHNNTREAALCKESRGNFLYCPRAVDLHHDDLGHFQWHWSKGEPVIVSNVLECTSGLSWEPFVMWRAFHQINKNKNKSLLDVKALDCLDWCEIDINVHQFFTGYTNWPKDKQNWPQVLKLKDWPPSKLFEESLPRHCAEFISSLPFKEYTNPFKGALNLAVKLPDEVLKPDMGPKTYIAYGFAQELGRGDSVTRLHCDMSDAVNVLTHIAEAKLDRGSIDAIKKLKQKHLEQDKRELHGDIQDGETTVENSLLVGGDSLDGALWDIFRREDVPALQEYLKKHFREFRHVHCSPVKEVIHPIHDQTFYLTIGHKKKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRQLPVNHRSIEDKLEVKKMIVYAMIDVVKKLEKARSQ*