AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0737230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737230 MtrunA17_Chr5g0434931 92.683 82 6 0 1 82 29 110 2.39e-51 161
Msa0737230 MtrunA17_Chr7g0228991 89.024 82 9 0 1 82 23 104 3.31e-48 153
Msa0737230 MtrunA17_Chr5g0434911 90.000 80 8 0 3 82 17 96 3.40e-48 153
Msa0737230 MtrunA17_Chr5g0434831 85.366 82 12 0 1 82 1 82 2.25e-47 149
Msa0737230 MtrunA17_Chr5g0434841 86.585 82 11 0 1 82 14 95 4.85e-47 151
Msa0737230 MtrunA17_Chr7g0220341 78.571 84 16 1 1 82 19 102 2.78e-42 138
Msa0737230 MtrunA17_Chr8g0360111 78.049 82 18 0 1 82 19 100 1.35e-41 136
Msa0737230 MtrunA17_Chr7g0240821 79.167 72 15 0 11 82 5 76 4.11e-36 121
Msa0737230 MtrunA17_Chr4g0055981 61.039 77 30 0 6 82 54 130 2.13e-29 104
Msa0737230 MtrunA17_Chr3g0121241 60.526 76 30 0 7 82 42 117 2.35e-29 105
Msa0737230 MtrunA17_Chr4g0070641 63.158 76 28 0 7 82 12 87 7.05e-29 101
Msa0737230 MtrunA17_Chr5g0395221 57.895 76 32 0 7 82 12 87 1.29e-28 98.2
Msa0737230 MtrunA17_Chr4g0070611 63.158 76 28 0 7 82 12 87 3.03e-28 102
Msa0737230 MtrunA17_Chr8g0343831 60.526 76 30 0 7 82 8 83 4.22e-27 99.0
Msa0737230 MtrunA17_Chr7g0274581 56.579 76 33 0 7 82 12 87 6.76e-27 97.1
Msa0737230 MtrunA17_Chr4g0022911 54.321 81 37 0 2 82 8 88 8.02e-27 99.0
Msa0737230 MtrunA17_Chr4g0042611 56.790 81 34 1 2 82 8 87 1.69e-26 92.8
Msa0737230 MtrunA17_Chr4g0022901 54.321 81 37 0 2 82 8 88 4.91e-26 96.3
Msa0737230 MtrunA17_Chr5g0435101 59.211 76 31 0 7 82 11 86 5.55e-26 95.1
Msa0737230 MtrunA17_Chr3g0115821 56.579 76 33 0 7 82 12 87 6.24e-26 97.4
Msa0737230 MtrunA17_Chr4g0022931 54.321 81 37 0 2 82 8 88 6.83e-26 96.3
Msa0737230 MtrunA17_Chr5g0395281 55.263 76 34 0 7 82 12 87 6.96e-26 96.7
Msa0737230 MtrunA17_Chr4g0048511 54.321 81 37 0 2 82 8 88 7.51e-26 97.4
Msa0737230 MtrunA17_Chr8g0346561 56.579 76 33 0 7 82 12 87 2.39e-25 95.1
Msa0737230 MtrunA17_Chr5g0410961 56.579 76 33 0 7 82 12 87 2.93e-25 95.5
Msa0737230 MtrunA17_Chr7g0275911 55.263 76 34 0 7 82 12 87 3.02e-25 94.0
Msa0737230 MtrunA17_Chr4g0039971 55.263 76 34 0 7 82 13 88 4.13e-25 95.5
Msa0737230 MtrunA17_Chr2g0281071 54.321 81 37 0 2 82 8 88 6.13e-25 94.7
Msa0737230 MtrunA17_Chr1g0187761 52.632 76 36 0 7 82 12 87 8.88e-25 92.8
Msa0737230 MtrunA17_Chr7g0271241 56.579 76 33 0 7 82 12 87 1.20e-24 94.4
Msa0737230 MtrunA17_Chr5g0434901 97.619 42 1 0 41 82 7 48 1.63e-24 88.6
Msa0737230 MtrunA17_Chr7g0270891 55.263 76 34 0 7 82 12 87 1.81e-24 94.0
Msa0737230 MtrunA17_Chr7g0217221 55.263 76 34 0 7 82 12 87 2.63e-24 92.0
Msa0737230 MtrunA17_Chr3g0080861 51.948 77 37 0 6 82 36 112 2.67e-24 94.4
Msa0737230 MtrunA17_Chr1g0193801 55.263 76 34 0 7 82 12 87 3.93e-24 93.2
Msa0737230 MtrunA17_Chr4g0058631 53.947 76 35 0 7 82 12 87 4.27e-24 92.8
Msa0737230 MtrunA17_Chr2g0323321 53.947 76 35 0 7 82 11 86 5.45e-24 87.0
Msa0737230 MtrunA17_Chr8g0342541 52.632 76 36 0 7 82 12 87 6.71e-24 92.0
Msa0737230 MtrunA17_Chr4g0042671 55.263 76 34 0 7 82 12 87 7.95e-24 92.4
Msa0737230 MtrunA17_Chr2g0323351 57.895 76 32 0 7 82 12 87 8.59e-24 90.1
Msa0737230 MtrunA17_Chr1g0167691 51.316 76 37 0 7 82 12 87 1.36e-23 89.7
Msa0737230 MtrunA17_Chr1g0193371 53.947 76 35 0 7 82 12 87 1.44e-23 91.3
Msa0737230 MtrunA17_Chr4g0037141 56.757 74 32 0 9 82 14 87 2.38e-23 89.7
Msa0737230 MtrunA17_Chr5g0434881 95.122 41 2 0 1 41 1 41 2.42e-23 83.6
Msa0737230 MtrunA17_Chr8g0342531 52.632 76 36 0 7 82 12 87 2.64e-23 87.0
Msa0737230 MtrunA17_Chr1g0203411 53.947 76 35 0 7 82 12 87 2.65e-23 89.7
Msa0737230 MtrunA17_Chr3g0099141 50.000 76 38 0 7 82 40 115 2.80e-23 86.3
Msa0737230 MtrunA17_Chr5g0417821 50.000 82 41 0 1 82 1 82 2.87e-23 89.4
Msa0737230 MtrunA17_Chr8g0342511 52.632 76 36 0 7 82 12 87 2.96e-23 84.7
Msa0737230 MtrunA17_Chr7g0261281 53.947 76 35 0 7 82 12 87 3.63e-23 89.0
Msa0737230 MtrunA17_Chr3g0099131 50.000 76 38 0 7 82 41 116 4.05e-23 90.9
Msa0737230 MtrunA17_Chr2g0294811 51.316 76 37 0 7 82 12 87 4.25e-23 85.1
Msa0737230 MtrunA17_Chr1g0167661 51.316 76 37 0 7 82 12 87 4.49e-23 88.2
Msa0737230 MtrunA17_Chr6g0453471 55.263 76 34 0 7 82 12 87 4.79e-23 89.7
Msa0737230 MtrunA17_Chr1g0209661 53.947 76 35 0 7 82 27 102 5.84e-23 89.0
Msa0737230 MtrunA17_Chr2g0330041 51.316 76 37 0 7 82 12 87 6.39e-23 90.1
Msa0737230 MtrunA17_Chr8g0342521 51.316 76 37 0 7 82 12 87 6.63e-23 89.4
Msa0737230 MtrunA17_Chr4g0044421 56.757 74 32 0 9 82 14 87 8.69e-23 86.3
Msa0737230 MtrunA17_Chr3g0131121 58.108 74 31 0 9 82 14 87 8.79e-23 88.2
Msa0737230 MtrunA17_Chr4g0032401 52.632 76 36 0 7 82 17 92 9.79e-23 88.6
Msa0737230 MtrunA17_Chr3g0117091 53.947 76 35 0 7 82 12 87 1.24e-22 88.6
Msa0737230 MtrunA17_Chr7g0217741 52.632 76 36 0 7 82 12 87 1.51e-22 87.8
Msa0737230 MtrunA17_Chr2g0323411 52.632 76 36 0 7 82 12 87 1.89e-22 87.8
Msa0737230 MtrunA17_Chr2g0328771 51.316 76 37 0 7 82 20 95 1.98e-22 87.8
Msa0737230 MtrunA17_Chr7g0254411 53.947 76 35 0 7 82 12 87 2.26e-22 87.8
Msa0737230 MtrunA17_Chr6g0453211 53.947 76 35 0 7 82 12 87 2.48e-22 87.4
Msa0737230 MtrunA17_Chr4g0060721 53.947 76 35 0 7 82 13 88 3.15e-22 87.4
Msa0737230 MtrunA17_Chr8g0385321 51.351 74 36 0 9 82 14 87 3.20e-22 87.0
Msa0737230 MtrunA17_Chr1g0211161 53.947 76 35 0 7 82 13 88 4.54e-22 85.1
Msa0737230 MtrunA17_Chr8g0354661 49.351 77 39 0 6 82 36 112 4.63e-22 88.2
Msa0737230 MtrunA17_Chr4g0068061 52.632 76 36 0 7 82 12 87 5.60e-22 86.7
Msa0737230 MtrunA17_Chr2g0311221 48.684 76 39 0 7 82 14 89 1.05e-21 85.9
Msa0737230 MtrunA17_Chr3g0092401 53.947 76 35 0 7 82 13 88 1.31e-21 85.5
Msa0737230 MtrunA17_Chr4g0022881 52.000 75 36 0 8 82 13 87 2.14e-21 83.6
Msa0737230 MtrunA17_Chr3g0088461 51.948 77 35 2 7 82 22 97 2.61e-21 85.1
Msa0737230 MtrunA17_Chr4g0022891 50.000 76 38 0 7 82 12 87 3.28e-21 83.2
Msa0737230 MtrunA17_Chr8g0387421 48.684 76 39 0 7 82 12 87 3.90e-21 84.3
Msa0737230 MtrunA17_Chr1g0203441 51.807 83 39 1 1 82 6 88 5.01e-21 83.2
Msa0737230 MtrunA17_Chr8g0342481 50.649 77 37 1 7 82 12 88 7.19e-21 84.3
Msa0737230 MtrunA17_Chr1g0154031 48.684 76 39 0 7 82 76 151 7.44e-21 84.3
Msa0737230 MtrunA17_Chr1g0186061 53.333 75 35 0 8 82 21 95 1.02e-20 82.4
Msa0737230 MtrunA17_Chr5g0425591 45.946 74 40 0 8 81 10 83 1.23e-20 78.2
Msa0737230 MtrunA17_Chr5g0397231 47.368 76 40 0 7 82 12 87 1.31e-20 83.2
Msa0737230 MtrunA17_Chr8g0342461 50.649 77 37 1 7 82 12 88 1.51e-20 79.3
Msa0737230 MtrunA17_Chr3g0103281 46.053 76 41 0 7 82 12 87 1.67e-20 82.8
Msa0737230 MtrunA17_Chr6g0487491 48.780 82 40 2 2 82 8 88 1.97e-20 81.6
Msa0737230 MtrunA17_Chr6g0452271 46.914 81 42 1 2 82 8 87 2.02e-20 82.4
Msa0737230 MtrunA17_Chr8g0349261 51.948 77 36 1 7 82 13 89 2.09e-20 82.0
Msa0737230 MtrunA17_Chr2g0322521 51.316 76 37 0 7 82 29 104 3.21e-20 82.4
Msa0737230 MtrunA17_Chr1g0192411 49.333 75 38 0 7 81 12 86 3.54e-20 82.4
Msa0737230 MtrunA17_Chr4g0054391 49.351 77 38 1 7 82 12 88 5.04e-20 80.9
Msa0737230 MtrunA17_Chr5g0441141 47.143 70 37 0 8 77 13 82 5.39e-20 80.5
Msa0737230 MtrunA17_Chr5g0440761 47.143 70 37 0 8 77 13 82 5.53e-20 80.5
Msa0737230 MtrunA17_Chr8g0342471 49.351 77 38 1 7 82 12 88 6.04e-20 77.8
Msa0737230 MtrunA17_Chr5g0400821 50.649 77 37 1 7 82 12 88 6.14e-20 80.9
Msa0737230 MtrunA17_Chr1g0168661 50.649 77 38 0 6 82 20 96 6.34e-20 80.1
Msa0737230 MtrunA17_Chr7g0228231 48.684 76 39 0 7 82 14 89 6.51e-20 79.3
Msa0737230 MtrunA17_Chr1g0194951 50.000 76 38 0 7 82 12 87 6.61e-20 81.6
Msa0737230 MtrunA17_Chr5g0440781 45.946 74 40 0 8 81 13 86 8.26e-20 78.6
Msa0737230 MtrunA17_Chr3g0135311 50.649 77 37 1 7 82 12 88 8.78e-20 80.9
Msa0737230 MtrunA17_Chr1g0152011 48.052 77 39 1 7 82 12 88 9.48e-20 80.9
Msa0737230 MtrunA17_Chr2g0309911 47.368 76 40 0 7 82 11 86 1.17e-19 80.1
Msa0737230 MtrunA17_Chr2g0327351 50.649 77 37 1 7 82 12 88 1.19e-19 80.5
Msa0737230 MtrunA17_Chr6g0450101 48.684 76 39 0 7 82 14 89 1.40e-19 78.2
Msa0737230 MtrunA17_Chr1g0194301 48.148 81 42 0 2 82 28 108 1.42e-19 79.7
Msa0737230 MtrunA17_Chr7g0228891 52.632 76 36 0 7 82 12 87 3.29e-19 78.6
Msa0737230 MtrunA17_Chr4g0028311 48.780 82 40 2 2 82 8 88 3.31e-19 79.3
Msa0737230 MtrunA17_Chr7g0229101 77.273 44 10 0 39 82 4 47 3.98e-19 77.0
Msa0737230 MtrunA17_Chr1g0194291 48.148 81 42 0 2 82 16 96 4.07e-19 78.2
Msa0737230 MtrunA17_Chr6g0470971 50.667 75 37 0 8 82 15 89 5.09e-19 78.2
Msa0737230 MtrunA17_Chr1g0151941 44.156 77 42 1 7 82 12 88 8.75e-19 77.0
Msa0737230 MtrunA17_Chr7g0229131 75.000 44 11 0 39 82 4 47 1.09e-18 75.1
Msa0737230 MtrunA17_Chr3g0110351 52.632 76 36 0 7 82 12 87 1.91e-18 77.0
Msa0737230 MtrunA17_Chr4g0072751 49.351 77 38 1 7 82 12 88 2.55e-18 77.0
Msa0737230 MtrunA17_Chr7g0264641 48.052 77 39 1 7 82 12 88 4.14e-18 75.5
Msa0737230 MtrunA17_Chr4g0057031 50.000 76 38 0 7 82 12 87 1.32e-17 74.3
Msa0737230 MtrunA17_Chr1g0180391 47.368 76 40 0 7 82 19 94 2.12e-17 73.2
Msa0737230 MtrunA17_Chr5g0434571 51.316 76 37 0 7 82 48 123 3.17e-17 73.9
Msa0737230 MtrunA17_Chr6g0453751 41.860 86 42 1 4 81 17 102 3.52e-17 70.5
Msa0737230 MtrunA17_Chr4g0068921 48.684 76 39 0 7 82 24 99 1.16e-16 70.5
Msa0737230 MtrunA17_Chr2g0327821 42.105 76 44 0 7 82 6 81 1.84e-16 70.9
Msa0737230 MtrunA17_Chr2g0293911 48.684 76 39 0 7 82 24 99 2.17e-16 71.6
Msa0737230 MtrunA17_Chr5g0441131 40.541 74 44 0 8 81 10 83 3.05e-16 69.3
Msa0737230 MtrunA17_Chr4g0053431 43.243 74 41 1 9 82 5 77 3.24e-16 70.5
Msa0737230 MtrunA17_Chr7g0269831 46.053 76 41 0 7 82 12 87 5.87e-16 70.5
Msa0737230 MtrunA17_Chr5g0401731 40.541 74 43 1 9 82 15 87 2.02e-15 68.9
Msa0737230 MtrunA17_Chr5g0429661 39.506 81 48 1 2 82 115 194 2.32e-15 68.9
Msa0737230 MtrunA17_Chr7g0238651 47.945 73 36 1 12 82 10 82 2.73e-15 68.6
Msa0737230 MtrunA17_Chr6g0460661 43.836 73 40 1 9 81 16 87 1.41e-14 64.3
Msa0737230 MtrunA17_Chr4g0008551 40.541 74 43 1 9 82 38 110 1.87e-14 66.2
Msa0737230 MtrunA17_Chr4g0058991 37.805 82 48 2 2 82 202 281 3.45e-14 65.9
Msa0737230 MtrunA17_Chr7g0228531 40.541 74 42 2 9 82 220 291 4.49e-14 65.5
Msa0737230 MtrunA17_Chr4g0042501 35.443 79 50 1 4 82 100 177 4.92e-14 65.1
Msa0737230 MtrunA17_Chr5g0417621 39.189 74 44 1 9 82 134 206 6.04e-14 65.1
Msa0737230 MtrunA17_Chr8g0334881 40.260 77 45 1 7 82 10 86 9.04e-14 64.3
Msa0737230 MtrunA17_Chr1g0157731 38.158 76 46 1 7 82 89 163 9.45e-14 64.3
Msa0737230 MtrunA17_Chr4g0030881 35.955 89 50 1 1 82 1 89 9.50e-14 63.9
Msa0737230 MtrunA17_Chr6g0454921 39.189 74 44 1 9 82 15 87 9.65e-14 63.2
Msa0737230 MtrunA17_Chr3g0117511 40.000 75 42 2 9 82 183 255 2.14e-13 63.5
Msa0737230 MtrunA17_Chr1g0193901 47.368 57 29 1 7 62 11 67 2.94e-13 59.7
Msa0737230 MtrunA17_Chr1g0193891 47.368 57 29 1 7 62 11 67 2.94e-13 59.7
Msa0737230 MtrunA17_Chr1g0193871 47.368 57 29 1 7 62 11 67 2.94e-13 59.7
Msa0737230 MtrunA17_Chr1g0193881 47.368 57 29 1 7 62 11 67 2.94e-13 59.7
Msa0737230 MtrunA17_Chr3g0133601 39.189 74 44 1 9 82 37 109 4.41e-13 61.6
Msa0737230 MtrunA17_Chr4g0013361 38.961 77 46 1 7 82 10 86 6.98e-13 61.6
Msa0737230 MtrunA17_Chr3g0139671 36.842 76 47 1 7 82 83 157 8.55e-13 61.6
Msa0737230 MtrunA17_Chr7g0247131 56.818 44 19 0 39 82 10 53 1.47e-12 60.5
Msa0737230 MtrunA17_Chr6g0460671 37.975 79 48 1 4 82 94 171 2.28e-12 60.5
Msa0737230 MtrunA17_Chr6g0480581 36.486 74 46 1 9 82 4 76 3.67e-12 59.3
Msa0737230 MtrunA17_Chr7g0238631 38.158 76 46 1 7 82 111 185 3.69e-12 60.1
Msa0737230 MtrunA17_Chr7g0254261 37.975 79 48 1 4 82 84 161 4.06e-12 59.7
Msa0737230 MtrunA17_Chr3g0125801 37.037 81 50 1 2 82 9 88 1.22e-11 58.2
Msa0737230 MtrunA17_Chr7g0228481 36.486 74 45 2 9 82 220 291 2.81e-11 57.4
Msa0737230 MtrunA17_Chr7g0274481 33.333 75 49 1 6 80 4 77 4.26e-11 57.0
Msa0737230 MtrunA17_Chr5g0397691 34.247 73 47 1 8 80 6 77 9.10e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0737230 AT1G66370.1 71.605 81 23 0 2 82 3 83 6.44e-36 121
Msa0737230 AT1G66380.2 75.949 79 19 0 4 82 5 83 3.45e-33 110
Msa0737230 AT1G66380.1 75.949 79 19 0 4 82 5 83 1.50e-32 110
Msa0737230 AT1G56650.1 73.418 79 21 0 4 82 5 83 5.15e-31 109
Msa0737230 AT1G66390.1 73.750 80 21 0 3 82 4 83 1.91e-30 107
Msa0737230 AT5G14750.1 54.321 81 37 0 2 82 11 91 1.69e-28 101
Msa0737230 AT3G13540.1 57.895 76 32 0 7 82 23 98 2.78e-28 102
Msa0737230 AT5G40330.1 54.667 75 34 0 8 82 13 87 1.37e-27 99.8
Msa0737230 AT5G16770.4 59.211 76 31 0 7 82 12 87 9.51e-27 99.8
Msa0737230 AT5G16770.3 59.211 76 31 0 7 82 12 87 9.51e-27 99.8
Msa0737230 AT5G16770.1 59.211 76 31 0 7 82 12 87 1.15e-26 99.8
Msa0737230 AT5G16770.2 59.211 76 31 0 7 82 12 87 1.15e-26 99.8
Msa0737230 AT1G74080.1 57.895 76 32 0 7 82 12 87 2.70e-26 98.6
Msa0737230 AT3G27920.1 53.333 75 35 0 8 82 15 89 1.05e-25 95.1
Msa0737230 AT5G35550.1 57.895 76 32 0 7 82 14 89 1.37e-25 95.5
Msa0737230 AT5G52600.1 53.086 81 38 0 2 82 7 87 1.90e-25 93.6
Msa0737230 AT5G60890.1 53.750 80 37 0 3 82 8 87 2.03e-25 95.5
Msa0737230 AT1G22640.1 57.895 76 32 0 7 82 12 87 2.52e-25 94.7
Msa0737230 AT3G02940.2 56.579 76 33 0 7 82 12 87 3.10e-25 95.5
Msa0737230 AT4G01680.1 56.579 76 33 0 7 82 12 87 3.51e-25 95.5
Msa0737230 AT1G18570.1 56.579 76 33 0 7 82 13 88 4.26e-25 95.5
Msa0737230 AT5G54230.1 55.263 76 34 0 7 82 12 87 4.49e-25 95.1
Msa0737230 AT3G02940.1 56.579 76 33 0 7 82 12 87 5.99e-25 94.7
Msa0737230 AT3G02940.3 56.579 76 33 0 7 82 12 87 5.99e-25 94.7
Msa0737230 AT4G01680.3 56.579 76 33 0 7 82 12 87 6.98e-25 93.2
Msa0737230 AT5G10280.1 55.263 76 34 0 7 82 12 87 8.13e-25 94.7
Msa0737230 AT5G61420.2 56.579 76 33 0 7 82 12 87 1.17e-24 94.7
Msa0737230 AT5G07690.1 56.579 76 33 0 7 82 12 87 2.19e-24 93.6
Msa0737230 AT4G21440.1 55.263 76 34 0 7 82 12 87 2.52e-24 93.6
Msa0737230 AT5G07700.1 55.263 76 34 0 7 82 12 87 3.23e-24 93.2
Msa0737230 AT5G07700.2 55.263 76 34 0 7 82 12 87 3.23e-24 93.2
Msa0737230 AT3G61250.1 55.263 76 34 0 7 82 12 87 3.39e-24 92.4
Msa0737230 AT5G55020.1 51.948 77 37 0 6 82 25 101 3.67e-24 94.4
Msa0737230 AT1G34670.1 55.263 76 34 0 7 82 12 87 4.41e-24 93.2
Msa0737230 AT2G32460.2 52.564 78 37 0 5 82 4 81 5.13e-24 94.0
Msa0737230 AT2G32460.1 52.564 78 37 0 5 82 16 93 5.33e-24 94.0
Msa0737230 AT3G47600.1 56.579 76 33 0 7 82 12 87 5.67e-24 92.4
Msa0737230 AT4G38620.1 58.108 74 31 0 9 82 14 87 6.02e-24 91.7
Msa0737230 AT4G17785.2 50.617 81 40 0 2 82 8 88 6.46e-24 92.4
Msa0737230 AT4G17785.1 50.617 81 40 0 2 82 8 88 7.09e-24 92.4
Msa0737230 AT2G16720.1 55.263 76 34 0 7 82 12 87 1.20e-23 90.5
Msa0737230 AT3G23250.1 51.316 76 37 0 7 82 12 87 1.35e-23 90.5
Msa0737230 AT4G26930.1 50.649 77 38 0 6 82 18 94 1.70e-23 91.7
Msa0737230 AT4G09460.1 56.757 74 32 0 9 82 14 87 1.72e-23 89.4
Msa0737230 AT5G15310.4 55.263 76 34 0 7 82 12 87 1.86e-23 89.7
Msa0737230 AT5G15310.1 55.263 76 34 0 7 82 12 87 2.08e-23 90.9
Msa0737230 AT3G13890.2 51.316 76 37 0 7 82 12 87 2.13e-23 91.3
Msa0737230 AT3G01140.2 55.263 76 34 0 7 82 12 87 2.47e-23 90.9
Msa0737230 AT5G15310.2 55.263 76 34 0 7 82 12 87 2.58e-23 90.5
Msa0737230 AT5G65230.1 53.947 76 35 0 7 82 12 87 3.01e-23 90.1
Msa0737230 AT3G30210.1 56.000 75 33 0 8 82 28 102 3.12e-23 89.7
Msa0737230 AT2G26960.1 51.351 74 36 0 9 82 22 95 3.57e-23 91.3
Msa0737230 AT4G34990.1 56.757 74 32 0 9 82 14 87 4.37e-23 89.0
Msa0737230 AT3G01140.1 55.263 76 34 0 7 82 55 130 4.70e-23 90.5
Msa0737230 AT1G09540.1 52.632 76 36 0 7 82 12 87 4.86e-23 90.5
Msa0737230 AT1G57560.1 53.947 76 35 0 7 82 12 87 5.01e-23 89.7
Msa0737230 AT1G74430.1 56.579 76 33 0 7 82 12 87 5.54e-23 89.0
Msa0737230 AT3G28470.1 47.368 76 40 0 7 82 12 87 6.68e-23 89.4
Msa0737230 AT1G57560.2 53.947 76 35 0 7 82 12 87 6.84e-23 88.6
Msa0737230 AT5G12870.1 47.500 80 42 0 3 82 14 93 7.95e-23 88.6
Msa0737230 AT4G28110.1 50.000 76 38 0 7 82 12 87 8.19e-23 88.6
Msa0737230 AT5G26660.1 53.947 76 35 0 7 82 12 87 8.58e-23 89.4
Msa0737230 AT4G05100.1 50.617 81 40 0 2 82 8 88 1.00e-22 89.0
Msa0737230 AT3G11440.3 46.250 80 43 0 3 82 37 116 1.25e-22 90.1
Msa0737230 AT3G11440.4 46.250 80 43 0 3 82 37 116 1.25e-22 90.1
Msa0737230 AT3G11440.1 46.250 80 43 0 3 82 37 116 1.25e-22 90.1
Msa0737230 AT3G11440.2 46.250 80 43 0 3 82 37 116 1.85e-22 89.4
Msa0737230 AT1G35515.1 51.316 76 37 0 7 82 12 87 3.95e-22 85.5
Msa0737230 AT1G74650.1 54.321 81 36 1 2 82 8 87 4.52e-22 87.4
Msa0737230 AT4G01680.2 48.864 88 33 1 7 82 12 99 4.79e-22 87.4
Msa0737230 AT5G62470.2 53.947 76 35 0 7 82 12 87 4.92e-22 87.4
Msa0737230 AT1G06180.1 52.632 76 36 0 7 82 12 87 7.18e-22 85.5
Msa0737230 AT3G28910.1 55.263 76 34 0 7 82 12 87 7.96e-22 86.7
Msa0737230 AT3G08500.1 51.316 76 37 0 7 82 30 105 8.12e-22 86.7
Msa0737230 AT3G01530.1 49.383 81 41 0 2 82 20 100 8.51e-22 84.3
Msa0737230 AT1G18710.1 52.632 76 36 0 7 82 12 87 1.50e-21 85.1
Msa0737230 AT5G49330.1 52.632 76 36 0 7 82 12 87 1.77e-21 85.9
Msa0737230 AT1G08810.1 53.947 76 35 0 7 82 12 87 2.17e-21 84.7
Msa0737230 AT3G62610.1 52.000 75 36 0 7 81 12 86 2.99e-21 85.1
Msa0737230 AT3G12720.1 47.368 76 40 0 7 82 22 97 3.05e-21 84.7
Msa0737230 AT5G06100.1 46.053 76 41 0 7 82 32 107 4.42e-21 85.5
Msa0737230 AT1G25340.1 54.667 75 34 0 8 82 19 93 4.67e-21 84.0
Msa0737230 AT1G16490.1 46.914 81 42 1 2 82 10 89 4.87e-21 83.6
Msa0737230 AT5G06100.5 46.053 76 41 0 7 82 32 107 5.44e-21 85.5
Msa0737230 AT5G06100.2 46.053 76 41 0 7 82 32 107 5.44e-21 85.5
Msa0737230 AT5G06100.3 46.053 76 41 0 7 82 32 107 5.44e-21 85.5
Msa0737230 AT5G06100.4 46.053 76 41 0 7 82 32 107 5.44e-21 85.5
Msa0737230 AT4G13480.1 53.247 77 36 0 6 82 5 81 6.13e-21 83.2
Msa0737230 AT2G31180.1 50.000 76 38 0 7 82 12 87 1.16e-20 82.4
Msa0737230 AT1G48000.1 52.632 76 36 0 7 82 32 107 1.47e-20 82.0
Msa0737230 AT3G13890.1 45.882 85 37 1 7 82 12 96 1.59e-20 83.6
Msa0737230 AT5G62470.1 53.947 76 34 1 7 82 12 86 1.66e-20 83.2
Msa0737230 AT2G47190.1 45.679 81 44 0 2 82 15 95 1.80e-20 82.4
Msa0737230 AT3G24310.1 53.333 75 35 0 8 82 19 93 2.06e-20 82.0
Msa0737230 AT3G48920.1 46.341 82 44 0 1 82 12 93 2.10e-20 82.0
Msa0737230 AT5G56110.1 47.368 76 40 0 7 82 12 87 2.17e-20 82.8
Msa0737230 AT1G68320.1 53.947 76 35 0 7 82 19 94 2.18e-20 82.0
Msa0737230 AT2G47460.1 47.368 76 40 0 7 82 12 87 2.24e-20 83.2
Msa0737230 AT1G63910.1 47.368 76 40 0 7 82 12 87 4.47e-20 82.4
Msa0737230 AT1G79180.1 46.914 81 42 1 2 82 10 89 4.64e-20 81.6
Msa0737230 AT1G56160.1 47.368 76 40 0 7 82 14 89 5.61e-20 81.3
Msa0737230 AT5G23000.1 50.000 82 39 2 2 82 8 88 6.74e-20 81.3
Msa0737230 AT5G40350.1 48.684 76 39 0 7 82 17 92 1.01e-19 79.3
Msa0737230 AT4G37780.1 48.052 77 39 1 7 82 12 88 1.03e-19 80.5
Msa0737230 AT5G57620.1 53.247 77 35 1 7 82 12 88 1.33e-19 80.9
Msa0737230 AT3G27810.1 47.368 76 40 0 7 82 20 95 2.11e-19 78.6
Msa0737230 AT3G49690.1 49.351 77 38 1 7 82 12 88 6.52e-19 78.6
Msa0737230 AT5G65790.1 49.351 77 38 1 7 82 12 88 1.05e-18 78.6
Msa0737230 AT5G14340.1 51.316 76 37 0 7 82 24 99 1.52e-18 77.0
Msa0737230 AT3G12820.1 46.053 76 41 0 7 82 14 89 1.76e-18 76.3
Msa0737230 AT4G25560.1 49.333 75 38 0 8 82 11 85 2.91e-18 76.6
Msa0737230 AT4G12350.1 48.052 77 40 0 6 82 11 87 3.27e-18 76.3
Msa0737230 AT4G22680.1 48.684 76 39 0 7 82 12 87 4.31e-18 75.9
Msa0737230 AT5G59780.3 46.667 75 40 0 8 82 9 83 4.51e-18 75.1
Msa0737230 AT2G36890.1 48.052 77 39 1 7 82 12 88 6.32e-18 75.9
Msa0737230 AT1G25340.2 52.000 75 31 1 8 82 19 88 6.45e-18 75.5
Msa0737230 AT2G36890.2 48.052 77 39 1 7 82 53 129 6.67e-18 76.3
Msa0737230 AT1G25340.3 52.000 75 31 1 8 82 19 88 7.84e-18 75.5
Msa0737230 AT3G46130.1 45.333 75 41 0 8 82 10 84 1.03e-17 74.7
Msa0737230 AT5G52260.1 54.667 75 34 0 8 82 13 87 1.56e-17 74.3
Msa0737230 AT3G53200.1 43.902 82 46 0 1 82 3 84 2.31e-17 73.6
Msa0737230 AT2G26950.1 41.463 82 46 1 1 82 12 91 3.19e-17 74.3
Msa0737230 AT5G62320.1 46.988 83 37 1 7 82 13 95 6.67e-17 72.4
Msa0737230 AT1G66230.1 48.684 76 39 0 7 82 12 87 1.65e-16 71.6
Msa0737230 AT4G37260.1 43.243 74 41 1 9 82 13 85 5.87e-16 70.5
Msa0737230 AT5G14750.3 72.500 40 11 0 43 82 18 57 7.32e-16 68.2
Msa0737230 AT5G16600.1 48.684 76 39 0 7 82 12 87 8.44e-16 70.1
Msa0737230 AT2G37630.1 47.945 73 36 1 12 82 7 79 9.90e-16 70.1
Msa0737230 AT3G06490.1 48.780 82 42 0 1 82 13 94 2.03e-15 69.3
Msa0737230 AT4G18770.1 42.500 80 45 1 3 82 211 289 2.69e-15 69.3
Msa0737230 AT2G23290.1 43.243 74 41 1 9 82 13 85 7.02e-15 67.8
Msa0737230 AT1G26780.2 41.558 77 44 1 6 82 95 170 7.95e-15 67.8
Msa0737230 AT5G11510.3 40.789 76 44 1 7 82 79 153 1.34e-14 67.4
Msa0737230 AT5G11510.1 40.789 76 44 1 7 82 79 153 1.34e-14 67.4
Msa0737230 AT5G11510.4 40.789 76 44 1 7 82 79 153 1.34e-14 67.4
Msa0737230 AT3G55730.1 43.243 74 41 1 9 82 56 128 1.86e-14 66.6
Msa0737230 AT5G11510.2 40.789 76 44 1 7 82 79 153 2.52e-14 66.6
Msa0737230 AT5G11510.5 40.789 76 44 1 7 82 79 153 2.64e-14 66.6
Msa0737230 AT1G69560.2 39.474 76 45 1 7 82 121 195 3.05e-14 66.2
Msa0737230 AT1G79180.2 32.456 114 43 2 2 82 10 122 3.24e-14 65.9
Msa0737230 AT1G26780.1 41.558 77 44 1 6 82 95 170 3.75e-14 65.5
Msa0737230 AT1G69560.1 39.474 76 45 1 7 82 105 179 4.08e-14 65.5
Msa0737230 AT5G49620.2 45.122 82 45 0 1 82 20 101 5.32e-14 65.1
Msa0737230 AT5G49620.1 45.122 82 45 0 1 82 20 101 5.55e-14 65.1
Msa0737230 AT4G33450.1 38.667 75 45 1 8 82 18 91 5.59e-14 64.7
Msa0737230 AT5G67300.1 40.541 74 43 1 9 82 6 78 5.72e-14 65.1
Msa0737230 AT5G26660.2 54.167 48 22 0 35 82 9 56 9.41e-14 64.7
Msa0737230 AT5G58850.1 37.975 79 48 1 4 82 100 177 1.31e-13 64.3
Msa0737230 AT3G60460.1 38.272 81 49 1 3 82 7 87 1.69e-13 63.9
Msa0737230 AT5G17800.1 40.506 79 46 1 4 82 88 165 2.11e-13 63.5
Msa0737230 AT3G09230.1 41.892 74 42 1 9 82 55 127 2.83e-13 63.5
Msa0737230 AT4G32730.5 38.158 76 46 1 7 82 85 159 4.17e-13 63.2
Msa0737230 AT4G32730.4 38.158 76 46 1 7 82 85 159 4.17e-13 63.2
Msa0737230 AT4G32730.3 38.158 76 46 1 7 82 85 159 4.17e-13 63.2
Msa0737230 AT4G32730.2 38.158 76 46 1 7 82 85 159 4.17e-13 63.2
Msa0737230 AT1G66380.3 79.545 44 9 0 39 82 7 50 4.49e-13 59.7
Msa0737230 AT3G47600.2 67.442 43 14 0 40 82 39 81 5.25e-13 62.4
Msa0737230 AT3G09370.1 36.842 76 47 1 7 82 128 202 5.46e-13 62.8
Msa0737230 AT3G09370.2 36.842 76 47 1 7 82 133 207 5.47e-13 62.8
Msa0737230 AT3G09370.3 36.842 76 47 1 7 82 141 215 5.52e-13 62.8
Msa0737230 AT3G27785.1 40.541 74 43 1 9 82 189 261 6.87e-13 62.4
Msa0737230 AT5G40360.1 35.802 81 51 1 2 82 151 230 7.25e-13 62.4
Msa0737230 AT4G32730.1 38.158 76 46 1 7 82 85 159 7.27e-13 62.4
Msa0737230 AT5G11050.1 39.189 74 44 1 9 82 105 177 7.76e-13 62.4
Msa0737230 AT1G17950.1 37.838 74 45 1 9 82 5 77 9.88e-13 61.2
Msa0737230 AT3G50060.1 37.838 74 45 1 9 82 6 78 1.17e-12 61.6
Msa0737230 AT5G35550.2 65.116 43 15 0 40 82 50 92 1.51e-12 60.8
Msa0737230 AT2G39880.1 41.892 74 42 1 9 82 50 122 3.44e-12 60.5
Msa0737230 AT5G02320.3 35.526 76 48 1 7 82 65 139 3.55e-12 60.5
Msa0737230 AT5G02320.1 35.526 76 48 1 7 82 125 199 6.24e-12 59.7
Msa0737230 AT5G02320.2 35.526 76 48 1 7 82 125 199 6.24e-12 59.7
Msa0737230 AT3G29020.1 37.500 80 47 2 4 82 60 137 6.42e-12 58.9
Msa0737230 AT3G29020.2 37.500 80 47 2 4 82 62 139 8.19e-12 59.3
Msa0737230 AT5G39700.1 37.037 81 50 1 2 82 49 128 1.17e-11 57.8

Find 14 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGGTTACACAAACTTCT+AGG 0.300586 5_1:-54275079 Msa0737230:CDS
AGAAGTATGGTGAAGGAAAA+TGG 0.332221 5_1:-54276489 Msa0737230:CDS
ATTTATGCCCTAACATCAAA+AGG 0.398525 5_1:-54275135 Msa0737230:CDS
ATGAAGTTGATATGATCTTA+AGG 0.415800 5_1:-54275096 Msa0737230:CDS
TTAACTTGGCAGGATTGAAT+AGG 0.416395 5_1:-54275192 Msa0737230:intron
TACACAAACTTCTAGGCAAC+AGG 0.417336 5_1:-54275072 None:intergenic
AAGGCTTGTATACAGAAGTA+TGG 0.439194 5_1:-54276502 Msa0737230:CDS
CATTTAGTTTCTCAAAGAGC+AGG 0.495360 5_1:-54276466 Msa0737230:intron
AAAAGGTGCATGGACATATG+AGG 0.529512 5_1:-54276539 Msa0737230:CDS
TTTATGCCCTAACATCAAAA+GGG 0.568947 5_1:-54275134 Msa0737230:CDS
TGTATACAGAAGTATGGTGA+AGG 0.613440 5_1:-54276496 Msa0737230:CDS
TGAGGAAGACAAGCTCCTCA+AGG 0.616104 5_1:-54276521 Msa0737230:CDS
CAAAAGGGAAAGCTTTGCTG+AGG 0.640568 5_1:-54275119 Msa0737230:CDS
ACTTCTGTATACAAGCCTTG+AGG 0.693065 5_1:+54276506 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAGAAAAAGAAAA+AGG - chr5_1:54275856-54275875 Msa0737230:intron 10.0%
!! AAAAAAATAGAAAAAGAAAA+AGG - chr5_1:54275856-54275875 Msa0737230:intron 10.0%
!! TGTTCAACTTAATTAATTAT+AGG + chr5_1:54275396-54275415 None:intergenic 15.0%
!!! GATTAATTTTCAGTTTTTAT+TGG + chr5_1:54275568-54275587 None:intergenic 15.0%
!!! ATTCAGTTCAATTTTAAAAA+AGG + chr5_1:54275663-54275682 None:intergenic 15.0%
!! AAAAATTATTACACCATTAT+CGG + chr5_1:54276058-54276077 None:intergenic 15.0%
!! AGAAATGAAATTATACAAAA+TGG + chr5_1:54276407-54276426 None:intergenic 15.0%
!! TGTTCAACTTAATTAATTAT+AGG + chr5_1:54275396-54275415 None:intergenic 15.0%
!!! GATTAATTTTCAGTTTTTAT+TGG + chr5_1:54275568-54275587 None:intergenic 15.0%
!!! ATTCAGTTCAATTTTAAAAA+AGG + chr5_1:54275663-54275682 None:intergenic 15.0%
!! AAAAATTATTACACCATTAT+CGG + chr5_1:54276058-54276077 None:intergenic 15.0%
!! AGAAATGAAATTATACAAAA+TGG + chr5_1:54276407-54276426 None:intergenic 15.0%
!!! TTTTCTTGTTGTTGATATAA+AGG - chr5_1:54275238-54275257 Msa0737230:intron 20.0%
!! TGTTCAACTTAGTTAATTAT+AGG + chr5_1:54275307-54275326 None:intergenic 20.0%
!!! AAGTTGAACAATTTTATAGA+AGG - chr5_1:54275317-54275336 Msa0737230:intron 20.0%
!! TAAGAAAAGAAAATTATGCA+TGG + chr5_1:54275356-54275375 None:intergenic 20.0%
!! AAAATAGAAAAAGAAAAAGG+AGG - chr5_1:54275859-54275878 Msa0737230:intron 20.0%
!! TTGTGTCAATATAAATCAAA+TGG - chr5_1:54275885-54275904 Msa0737230:intron 20.0%
!! TATAAATCAAATGGAAATGA+TGG - chr5_1:54275894-54275913 Msa0737230:intron 20.0%
!!! TTGTTTTTTTGTAAATAGAG+TGG + chr5_1:54275927-54275946 None:intergenic 20.0%
!!! CAAGGATTTTTTTTGTTTTT+TGG - chr5_1:54276013-54276032 Msa0737230:intron 20.0%
!!! TTTTTTTTGTTTTTTGGTCT+TGG - chr5_1:54276019-54276038 Msa0737230:intron 20.0%
!!! TTTTCTTGTTGTTGATATAA+AGG - chr5_1:54275238-54275257 Msa0737230:intron 20.0%
!! TGTTCAACTTAGTTAATTAT+AGG + chr5_1:54275307-54275326 None:intergenic 20.0%
!!! AAGTTGAACAATTTTATAGA+AGG - chr5_1:54275317-54275336 Msa0737230:intron 20.0%
!! TAAGAAAAGAAAATTATGCA+TGG + chr5_1:54275356-54275375 None:intergenic 20.0%
!! AAAATAGAAAAAGAAAAAGG+AGG - chr5_1:54275859-54275878 Msa0737230:intron 20.0%
!! TTGTGTCAATATAAATCAAA+TGG - chr5_1:54275885-54275904 Msa0737230:intron 20.0%
!! TATAAATCAAATGGAAATGA+TGG - chr5_1:54275894-54275913 Msa0737230:intron 20.0%
!!! TTGTTTTTTTGTAAATAGAG+TGG + chr5_1:54275927-54275946 None:intergenic 20.0%
!!! CAAGGATTTTTTTTGTTTTT+TGG - chr5_1:54276013-54276032 Msa0737230:intron 20.0%
!!! TTTTTTTTGTTTTTTGGTCT+TGG - chr5_1:54276019-54276038 Msa0737230:intron 20.0%
! CAACTTAGTTAATTATAGGA+AGG + chr5_1:54275303-54275322 None:intergenic 25.0%
!! AGTTTTTATTGGCACTATTT+TGG + chr5_1:54275557-54275576 None:intergenic 25.0%
! TGAACAAATATCTAAAAGCA+AGG - chr5_1:54275995-54276014 Msa0737230:intron 25.0%
!!! CAGAATTTTTTCATACAAAC+CGG + chr5_1:54276339-54276358 None:intergenic 25.0%
!! AAAATTTTGGATCATTTGGA+AGG + chr5_1:54276376-54276395 None:intergenic 25.0%
!! TGTGAAACTATTTGTTAACT+TGG - chr5_1:54276431-54276450 Msa0737230:intron 25.0%
!!! ATGAAGTTGATATGATCTTA+AGG - chr5_1:54276541-54276560 Msa0737230:CDS 25.0%
! CAACTTAGTTAATTATAGGA+AGG + chr5_1:54275303-54275322 None:intergenic 25.0%
!! AGTTTTTATTGGCACTATTT+TGG + chr5_1:54275557-54275576 None:intergenic 25.0%
! TGAACAAATATCTAAAAGCA+AGG - chr5_1:54275995-54276014 Msa0737230:intron 25.0%
!!! CAGAATTTTTTCATACAAAC+CGG + chr5_1:54276339-54276358 None:intergenic 25.0%
!! AAAATTTTGGATCATTTGGA+AGG + chr5_1:54276376-54276395 None:intergenic 25.0%
!! TGTGAAACTATTTGTTAACT+TGG - chr5_1:54276431-54276450 Msa0737230:intron 25.0%
!!! ATGAAGTTGATATGATCTTA+AGG - chr5_1:54276541-54276560 Msa0737230:CDS 25.0%
!!! AAGACTAGAGTTTTGAGAAA+AGG - chr5_1:54275081-54275100 Msa0737230:CDS 30.0%
GTTACAACAGAATCAGAATT+CGG - chr5_1:54276160-54276179 Msa0737230:intron 30.0%
ACATTGCCTTTGATTATCAT+CGG + chr5_1:54276247-54276266 None:intergenic 30.0%
TGATAATCAAAGGCAATGTT+TGG - chr5_1:54276248-54276267 Msa0737230:intron 30.0%
! CAGCAAAATTTTGGATCATT+TGG + chr5_1:54276380-54276399 None:intergenic 30.0%
! AATGGTTGACAGCAAAATTT+TGG + chr5_1:54276389-54276408 None:intergenic 30.0%
! AAACTATTTGTTAACTTGGC+AGG - chr5_1:54276435-54276454 Msa0737230:intron 30.0%
ATTTATGCCCTAACATCAAA+AGG - chr5_1:54276502-54276521 Msa0737230:CDS 30.0%
TTTATGCCCTAACATCAAAA+GGG - chr5_1:54276503-54276522 Msa0737230:CDS 30.0%
TTAAGGTTACACAAACTTCT+AGG - chr5_1:54276558-54276577 Msa0737230:CDS 30.0%
!!! AAGACTAGAGTTTTGAGAAA+AGG - chr5_1:54275081-54275100 Msa0737230:CDS 30.0%
GTTACAACAGAATCAGAATT+CGG - chr5_1:54276160-54276179 Msa0737230:intron 30.0%
ACATTGCCTTTGATTATCAT+CGG + chr5_1:54276247-54276266 None:intergenic 30.0%
TGATAATCAAAGGCAATGTT+TGG - chr5_1:54276248-54276267 Msa0737230:intron 30.0%
! CAGCAAAATTTTGGATCATT+TGG + chr5_1:54276380-54276399 None:intergenic 30.0%
! AATGGTTGACAGCAAAATTT+TGG + chr5_1:54276389-54276408 None:intergenic 30.0%
! AAACTATTTGTTAACTTGGC+AGG - chr5_1:54276435-54276454 Msa0737230:intron 30.0%
ATTTATGCCCTAACATCAAA+AGG - chr5_1:54276502-54276521 Msa0737230:CDS 30.0%
TTTATGCCCTAACATCAAAA+GGG - chr5_1:54276503-54276522 Msa0737230:CDS 30.0%
TTAAGGTTACACAAACTTCT+AGG - chr5_1:54276558-54276577 Msa0737230:CDS 30.0%
AAGGCTTGTATACAGAAGTA+TGG - chr5_1:54275135-54275154 Msa0737230:CDS 35.0%
! TGTATACAGAAGTATGGTGA+AGG - chr5_1:54275141-54275160 Msa0737230:CDS 35.0%
! AGAAGTATGGTGAAGGAAAA+TGG - chr5_1:54275148-54275167 Msa0737230:CDS 35.0%
! CATTTAGTTTCTCAAAGAGC+AGG - chr5_1:54275171-54275190 Msa0737230:CDS 35.0%
CATGGGATAAAGTTTGTCAA+AGG + chr5_1:54275524-54275543 None:intergenic 35.0%
CTTTGACAAACTTTATCCCA+TGG - chr5_1:54275522-54275541 Msa0737230:intron 35.0%
ACAAACTTTATCCCATGGTA+CGG - chr5_1:54275527-54275546 Msa0737230:intron 35.0%
! ATTTTGGATATCCGTACCAT+GGG + chr5_1:54275541-54275560 None:intergenic 35.0%
!! TATTTTGGATATCCGTACCA+TGG + chr5_1:54275542-54275561 None:intergenic 35.0%
AAAAGAACTGATACACCACT+CGG - chr5_1:54275594-54275613 Msa0737230:intron 35.0%
! ATGAAGTGCTAATCCGATAA+TGG - chr5_1:54276042-54276061 Msa0737230:intron 35.0%
TATTAATCTTCGCAAGCACA+AGG - chr5_1:54276102-54276121 Msa0737230:intron 35.0%
TTTGGATCATTTGGAAGGAT+AGG + chr5_1:54276371-54276390 None:intergenic 35.0%
! TTAACTTGGCAGGATTGAAT+AGG - chr5_1:54276445-54276464 Msa0737230:intron 35.0%
! ACCTCAATCTGCAACTTTTT+CGG + chr5_1:54276473-54276492 None:intergenic 35.0%
! AGCTTTCCCTTTTGATGTTA+GGG + chr5_1:54276512-54276531 None:intergenic 35.0%
! AAGCTTTCCCTTTTGATGTT+AGG + chr5_1:54276513-54276532 None:intergenic 35.0%
AAGGCTTGTATACAGAAGTA+TGG - chr5_1:54275135-54275154 Msa0737230:CDS 35.0%
! TGTATACAGAAGTATGGTGA+AGG - chr5_1:54275141-54275160 Msa0737230:CDS 35.0%
! AGAAGTATGGTGAAGGAAAA+TGG - chr5_1:54275148-54275167 Msa0737230:CDS 35.0%
! CATTTAGTTTCTCAAAGAGC+AGG - chr5_1:54275171-54275190 Msa0737230:CDS 35.0%
CATGGGATAAAGTTTGTCAA+AGG + chr5_1:54275524-54275543 None:intergenic 35.0%
CTTTGACAAACTTTATCCCA+TGG - chr5_1:54275522-54275541 Msa0737230:intron 35.0%
ACAAACTTTATCCCATGGTA+CGG - chr5_1:54275527-54275546 Msa0737230:intron 35.0%
! ATTTTGGATATCCGTACCAT+GGG + chr5_1:54275541-54275560 None:intergenic 35.0%
!! TATTTTGGATATCCGTACCA+TGG + chr5_1:54275542-54275561 None:intergenic 35.0%
AAAAGAACTGATACACCACT+CGG - chr5_1:54275594-54275613 Msa0737230:intron 35.0%
! ATGAAGTGCTAATCCGATAA+TGG - chr5_1:54276042-54276061 Msa0737230:intron 35.0%
TATTAATCTTCGCAAGCACA+AGG - chr5_1:54276102-54276121 Msa0737230:intron 35.0%
TTTGGATCATTTGGAAGGAT+AGG + chr5_1:54276371-54276390 None:intergenic 35.0%
! TTAACTTGGCAGGATTGAAT+AGG - chr5_1:54276445-54276464 Msa0737230:intron 35.0%
! ACCTCAATCTGCAACTTTTT+CGG + chr5_1:54276473-54276492 None:intergenic 35.0%
! AGCTTTCCCTTTTGATGTTA+GGG + chr5_1:54276512-54276531 None:intergenic 35.0%
! AAGCTTTCCCTTTTGATGTT+AGG + chr5_1:54276513-54276532 None:intergenic 35.0%
!!! GAGTTTTGAGAAAAGGTGCA+TGG - chr5_1:54275088-54275107 Msa0737230:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG - chr5_1:54275098-54275117 Msa0737230:CDS 40.0%
ACTTCTGTATACAAGCCTTG+AGG + chr5_1:54275134-54275153 None:intergenic 40.0%
!! GTGTATCAGTTCTTTTGGAG+AGG + chr5_1:54275590-54275609 None:intergenic 40.0%
! GAGTGGTGTATCAGTTCTTT+TGG + chr5_1:54275595-54275614 None:intergenic 40.0%
AAAGAACTGATACACCACTC+GGG - chr5_1:54275595-54275614 Msa0737230:intron 40.0%
CTATGCCCATGCACAATAAA+GGG - chr5_1:54276210-54276229 Msa0737230:intron 40.0%
CTTAGCCCTTTATTGTGCAT+GGG + chr5_1:54276218-54276237 None:intergenic 40.0%
ACTTAGCCCTTTATTGTGCA+TGG + chr5_1:54276219-54276238 None:intergenic 40.0%
TGCCTTTGATTATCATCGGT+GGG + chr5_1:54276243-54276262 None:intergenic 40.0%
TTGCCTTTGATTATCATCGG+TGG + chr5_1:54276244-54276263 None:intergenic 40.0%
!!! TCTTTCGTTTTGGAGGTTGA+AGG + chr5_1:54276282-54276301 None:intergenic 40.0%
! TCAAGCTTCTTTCGTTTTGG+AGG + chr5_1:54276289-54276308 None:intergenic 40.0%
! GTGTCAAGCTTCTTTCGTTT+TGG + chr5_1:54276292-54276311 None:intergenic 40.0%
ACTGTCAATTAGCTGAAGAG+TGG - chr5_1:54276310-54276329 Msa0737230:intron 40.0%
GAAAAAGTTGCAGATTGAGG+TGG - chr5_1:54276472-54276491 Msa0737230:CDS 40.0%
!!! GAGTTTTGAGAAAAGGTGCA+TGG - chr5_1:54275088-54275107 Msa0737230:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG - chr5_1:54275098-54275117 Msa0737230:CDS 40.0%
ACTTCTGTATACAAGCCTTG+AGG + chr5_1:54275134-54275153 None:intergenic 40.0%
!! GTGTATCAGTTCTTTTGGAG+AGG + chr5_1:54275590-54275609 None:intergenic 40.0%
! GAGTGGTGTATCAGTTCTTT+TGG + chr5_1:54275595-54275614 None:intergenic 40.0%
AAAGAACTGATACACCACTC+GGG - chr5_1:54275595-54275614 Msa0737230:intron 40.0%
CTATGCCCATGCACAATAAA+GGG - chr5_1:54276210-54276229 Msa0737230:intron 40.0%
CTTAGCCCTTTATTGTGCAT+GGG + chr5_1:54276218-54276237 None:intergenic 40.0%
ACTTAGCCCTTTATTGTGCA+TGG + chr5_1:54276219-54276238 None:intergenic 40.0%
TGCCTTTGATTATCATCGGT+GGG + chr5_1:54276243-54276262 None:intergenic 40.0%
TTGCCTTTGATTATCATCGG+TGG + chr5_1:54276244-54276263 None:intergenic 40.0%
!!! TCTTTCGTTTTGGAGGTTGA+AGG + chr5_1:54276282-54276301 None:intergenic 40.0%
! TCAAGCTTCTTTCGTTTTGG+AGG + chr5_1:54276289-54276308 None:intergenic 40.0%
! GTGTCAAGCTTCTTTCGTTT+TGG + chr5_1:54276292-54276311 None:intergenic 40.0%
ACTGTCAATTAGCTGAAGAG+TGG - chr5_1:54276310-54276329 Msa0737230:intron 40.0%
GAAAAAGTTGCAGATTGAGG+TGG - chr5_1:54276472-54276491 Msa0737230:CDS 40.0%
AAGAACTGATACACCACTCG+GGG - chr5_1:54275596-54275615 Msa0737230:intron 45.0%
CAAGCACAAGGTGTGCTAAA+GGG - chr5_1:54276114-54276133 Msa0737230:intron 45.0%
CCTTTATTGTGCATGGGCAT+AGG + chr5_1:54276212-54276231 None:intergenic 45.0%
CCTATGCCCATGCACAATAA+AGG - chr5_1:54276209-54276228 Msa0737230:intron 45.0%
TCCCCACCGATGATAATCAA+AGG - chr5_1:54276238-54276257 Msa0737230:intron 45.0%
GCCTTTGATTATCATCGGTG+GGG + chr5_1:54276242-54276261 None:intergenic 45.0%
GTCAATTAGCTGAAGAGTGG+AGG - chr5_1:54276313-54276332 Msa0737230:intron 45.0%
GCCGAAAAAGTTGCAGATTG+AGG - chr5_1:54276469-54276488 Msa0737230:CDS 45.0%
CAAAAGGGAAAGCTTTGCTG+AGG - chr5_1:54276518-54276537 Msa0737230:CDS 45.0%
AAGAACTGATACACCACTCG+GGG - chr5_1:54275596-54275615 Msa0737230:intron 45.0%
CAAGCACAAGGTGTGCTAAA+GGG - chr5_1:54276114-54276133 Msa0737230:intron 45.0%
CCTTTATTGTGCATGGGCAT+AGG + chr5_1:54276212-54276231 None:intergenic 45.0%
CCTATGCCCATGCACAATAA+AGG - chr5_1:54276209-54276228 Msa0737230:intron 45.0%
TCCCCACCGATGATAATCAA+AGG - chr5_1:54276238-54276257 Msa0737230:intron 45.0%
GCCTTTGATTATCATCGGTG+GGG + chr5_1:54276242-54276261 None:intergenic 45.0%
GTCAATTAGCTGAAGAGTGG+AGG - chr5_1:54276313-54276332 Msa0737230:intron 45.0%
GCCGAAAAAGTTGCAGATTG+AGG - chr5_1:54276469-54276488 Msa0737230:CDS 45.0%
CAAAAGGGAAAGCTTTGCTG+AGG - chr5_1:54276518-54276537 Msa0737230:CDS 45.0%
TGAGGAAGACAAGCTCCTCA+AGG - chr5_1:54275116-54275135 Msa0737230:CDS 50.0%
ATACACCACTCGGGGTTTAG+AGG - chr5_1:54275604-54275623 Msa0737230:intron 50.0%
GCAAGCACAAGGTGTGCTAA+AGG - chr5_1:54276113-54276132 Msa0737230:intron 50.0%
ATTAGCTGAAGAGTGGAGGC+CGG - chr5_1:54276317-54276336 Msa0737230:intron 50.0%
TGAGGAAGACAAGCTCCTCA+AGG - chr5_1:54275116-54275135 Msa0737230:CDS 50.0%
ATACACCACTCGGGGTTTAG+AGG - chr5_1:54275604-54275623 Msa0737230:intron 50.0%
GCAAGCACAAGGTGTGCTAA+AGG - chr5_1:54276113-54276132 Msa0737230:intron 50.0%
ATTAGCTGAAGAGTGGAGGC+CGG - chr5_1:54276317-54276336 Msa0737230:intron 50.0%
GAACACCTCTAAACCCCGAG+TGG + chr5_1:54275612-54275631 None:intergenic 55.0%
GAACACCTCTAAACCCCGAG+TGG + chr5_1:54275612-54275631 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 54275075 54276584 54275075 ID=Msa0737230;Name=Msa0737230
chr5_1 mRNA 54275075 54276584 54275075 ID=Msa0737230-mRNA-1;Parent=Msa0737230;Name=Msa0737230-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|0|2|0|82
chr5_1 exon 54276467 54276584 54276467 ID=Msa0737230-mRNA-1:exon:15241;Parent=Msa0737230-mRNA-1
chr5_1 exon 54275075 54275202 54275075 ID=Msa0737230-mRNA-1:exon:15240;Parent=Msa0737230-mRNA-1
chr5_1 CDS 54276467 54276584 54276467 ID=Msa0737230-mRNA-1:cds;Parent=Msa0737230-mRNA-1
chr5_1 CDS 54275075 54275202 54275075 ID=Msa0737230-mRNA-1:cds;Parent=Msa0737230-mRNA-1
Gene Sequence

>Msa0737230

ATGGAGAAGACTAGAGTTTTGAGAAAAGGTGCATGGACATATGAGGAAGACAAGCTCCTCAAGGCTTGTATACAGAAGTATGGTGAAGGAAAATGGCATTTAGTTTCTCAAAGAGCAGGATTGAATAGGTGCCGAAAAAGTTGCAGATTGAGGTGGTTAAACTATTTATGCCCTAACATCAAAAGGGAAAGCTTTGCTGAGGATGAAGTTGATATGATCTTAAGGTTACACAAACTTCTAGGCAAC
Protein sequence

>Msa0737230

MEKTRVLRKGAWTYEEDKLLKACIQKYGEGKWHLVSQRAGLNRCRKSCRLRWLNYLCPNIKRESFAEDEVDMILRLHKLLGN