Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737620 | XP_003616418.1 | 63.636 | 88 | 29 | 2 | 445 | 531 | 264 | 349 | 7.98e-19 | 100 |
| Msa0737620 | XP_003616418.1 | 73.016 | 126 | 34 | 0 | 398 | 523 | 141 | 266 | 5.00e-52 | 193 |
| Msa0737620 | XP_003616418.1 | 85.122 | 410 | 35 | 7 | 1 | 398 | 1 | 396 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737620 | G7KBS3 | 63.636 | 88 | 29 | 2 | 445 | 531 | 264 | 349 | 3.81e-19 | 100 |
| Msa0737620 | G7KBS3 | 73.016 | 126 | 34 | 0 | 398 | 523 | 141 | 266 | 2.39e-52 | 193 |
| Msa0737620 | G7KBS3 | 85.122 | 410 | 35 | 7 | 1 | 398 | 1 | 396 | 0.0 | 686 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0737620 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737620 | MtrunA17_Chr5g0435401 | 85.122 | 410 | 35 | 7 | 1 | 398 | 1 | 396 | 0.0 | 686 |
| Msa0737620 | MtrunA17_Chr5g0435401 | 73.016 | 126 | 34 | 0 | 398 | 523 | 141 | 266 | 4.60e-56 | 193 |
| Msa0737620 | MtrunA17_Chr5g0435401 | 63.636 | 88 | 29 | 2 | 445 | 531 | 264 | 349 | 7.34e-23 | 100 |
| Msa0737620 | MtrunA17_Chr5g0445971 | 65.942 | 138 | 39 | 2 | 41 | 178 | 34 | 163 | 6.27e-52 | 174 |
| Msa0737620 | MtrunA17_Chr1g0192841 | 39.604 | 202 | 71 | 2 | 198 | 397 | 74 | 226 | 9.06e-38 | 139 |
| Msa0737620 | MtrunA17_Chr1g0192841 | 55.046 | 109 | 38 | 2 | 434 | 531 | 44 | 152 | 9.30e-25 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 100 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAGTTTAACTCAATTAA+TGG | 0.155570 | 5_1:+54892194 | Msa0737620:CDS |
| CAAGATCTTCAGTGCTCTTT+TGG | 0.157665 | 5_1:-54893553 | None:intergenic |
| ATCCCTCTTCAGTGCTCTTT+TGG | 0.182749 | 5_1:-54898169 | None:intergenic |
| ATTCAAATCACCTGGGAAAA+AGG | 0.184616 | 5_1:-54893711 | None:intergenic |
| AAAGCTGATCATCAGTTTAA+AGG | 0.190474 | 5_1:+54893309 | Msa0737620:CDS |
| CCAGTTGCAATTTGAGTTGC+AGG | 0.243041 | 5_1:-54891982 | None:intergenic |
| TCGTAAGCTCGCTGAGCTTT+TGG | 0.268417 | 5_1:+54891079 | Msa0737620:CDS |
| CCTTAGTTTATCTCAATTAG+TGG | 0.324039 | 5_1:+54897140 | Msa0737620:CDS |
| AGTTGTTTCTGCACTAAAAC+TGG | 0.332000 | 5_1:+54891870 | Msa0737620:CDS |
| GACTACTTTAGTCAAATTAC+AGG | 0.332385 | 5_1:+54892255 | Msa0737620:CDS |
| TTAAACTAGTGGTTGAGTTT+TGG | 0.344431 | 5_1:-54892182 | None:intergenic |
| TTATATCCACTCTGACCTAT+TGG | 0.347768 | 5_1:-54897868 | None:intergenic |
| CCTCTATCAAACTACTCTTT+TGG | 0.354206 | 5_1:+54893632 | Msa0737620:CDS |
| TTATATCCACTCTGTCCTAT+TGG | 0.357025 | 5_1:-54892917 | None:intergenic |
| AGAGGAAAGCATGAAGATAA+AGG | 0.358251 | 5_1:+54893508 | Msa0737620:CDS |
| CTCTCAGTGAGGATATAATA+TGG | 0.364315 | 5_1:-54891050 | None:intergenic |
| TTCATGCTTTCCTCTTCATA+TGG | 0.373376 | 5_1:-54893500 | None:intergenic |
| AAAGGAAAGCAAGGAGATAA+AGG | 0.375471 | 5_1:+54898124 | Msa0737620:CDS |
| TTCACGCTTGCCTCTTCATA+TGG | 0.385956 | 5_1:-54893165 | None:intergenic |
| GACTACTCTAATCAAATTAC+TGG | 0.401984 | 5_1:+54897201 | Msa0737620:CDS |
| CCACTAATTGAGATAAACTA+AGG | 0.402610 | 5_1:-54897140 | None:intergenic |
| AGGTTGATCAAGAAAAGAAA+TGG | 0.402611 | 5_1:+54891842 | Msa0737620:intron |
| GTTGTCAGACATGGAGAAAC+AGG | 0.404911 | 5_1:+54893036 | Msa0737620:CDS |
| AGAGGCAAGCGTGAAGATAA+AGG | 0.407513 | 5_1:+54893173 | Msa0737620:CDS |
| TTAATTTCATTAATGGAAGA+AGG | 0.420089 | 5_1:+54890936 | None:intergenic |
| ATTGCAACTGGCAGCAATAC+AGG | 0.426800 | 5_1:+54891994 | Msa0737620:CDS |
| GTTGTCAGACAAGGAGAAAC+AGG | 0.430794 | 5_1:+54897987 | Msa0737620:CDS |
| CCAAAAGAGTAGTTTGATAG+AGG | 0.436540 | 5_1:-54893632 | None:intergenic |
| TCGTGACCTCCAAGTAAAAC+AGG | 0.439872 | 5_1:-54891631 | None:intergenic |
| TTGAGACATTGTACTTCTAC+AGG | 0.444314 | 5_1:+54891956 | Msa0737620:CDS |
| CAACAACGCACCGGTCGACT+TGG | 0.446024 | 5_1:+54893655 | Msa0737620:CDS |
| AGAACAAAGAAAAGAAGAAA+CGG | 0.447276 | 5_1:+54892885 | Msa0737620:CDS |
| AGGAAAGGAATTAGTAGTGA+TGG | 0.453771 | 5_1:+54890956 | Msa0737620:CDS |
| TACTTGGAGGTCACGAAAAG+AGG | 0.458176 | 5_1:+54891638 | Msa0737620:CDS |
| TAGTAGTCACCACACACAAT+AGG | 0.458403 | 5_1:-54893593 | None:intergenic |
| CCTGCAACTCAAATTGCAAC+TGG | 0.458671 | 5_1:+54891982 | Msa0737620:CDS |
| AAACGGAGACGTGCTCCAAT+AGG | 0.460049 | 5_1:+54897853 | Msa0737620:CDS |
| TTTCATGTAGCCATATGAAA+AGG | 0.472708 | 5_1:+54898106 | Msa0737620:intron |
| AAACGGAGAGGTGCTCCAAT+AGG | 0.474962 | 5_1:+54892902 | Msa0737620:CDS |
| TTCATTAATGGAAGAAGGAA+AGG | 0.479210 | 5_1:+54890941 | None:intergenic |
| TATGCACTCTTCTGTCCCCT+TGG | 0.481011 | 5_1:-54893252 | None:intergenic |
| TCGTCTAAAAGCTGATCATC+AGG | 0.483966 | 5_1:+54897915 | Msa0737620:CDS |
| GTAAAACAGGTACAAGTCAA+TGG | 0.487500 | 5_1:-54891618 | None:intergenic |
| CTTTCTAAGGTTCAGGTGAA+AGG | 0.489642 | 5_1:+54897103 | Msa0737620:intron |
| TTCATCAATGGAAGAAGCAA+AGG | 0.491657 | 5_1:+54891007 | Msa0737620:CDS |
| GGTTGATCAAGAAAAGAAAT+GGG | 0.491923 | 5_1:+54891843 | Msa0737620:intron |
| AGAAGCAAAGGAATTAGAGA+TGG | 0.514965 | 5_1:+54891019 | Msa0737620:CDS |
| ATAACAAAGAAAAGAAGAAA+CGG | 0.522686 | 5_1:+54897836 | Msa0737620:CDS |
| GACGAGCACATTCCTGCTTG+AGG | 0.523607 | 5_1:-54897897 | None:intergenic |
| TCTATATAGGTCCAGTTGAA+AGG | 0.528822 | 5_1:+54892157 | Msa0737620:intron |
| AAATCACGGCTATTGATGCT+TGG | 0.536227 | 5_1:+54893340 | Msa0737620:CDS |
| TAGACATGGCTATTGATGCT+TGG | 0.537672 | 5_1:+54897959 | Msa0737620:CDS |
| TAGAGATGGCTATTGATGCT+TGG | 0.538363 | 5_1:+54893008 | Msa0737620:CDS |
| TCGACTTAAAGCTTATCATC+AGG | 0.545141 | 5_1:+54892964 | Msa0737620:CDS |
| GTCTAGCGCATTCATGCTTG+AGG | 0.557923 | 5_1:-54893284 | None:intergenic |
| GCCATATGAAAAGGAAAGCA+AGG | 0.558682 | 5_1:+54898115 | Msa0737620:intron |
| AACATGAGATTGAATCCAGA+AGG | 0.564550 | 5_1:-54891104 | None:intergenic |
| ATCCAAAAGAGCACTGAAGA+GGG | 0.571626 | 5_1:+54898167 | Msa0737620:CDS |
| TTTCATGTAGCCATATGAAG+AGG | 0.580743 | 5_1:+54893155 | Msa0737620:intron |
| GTTTCTGCACTAAAACTGGA+AGG | 0.584593 | 5_1:+54891874 | Msa0737620:CDS |
| ATATAATATATTCCTCAAGC+AGG | 0.589592 | 5_1:+54892934 | Msa0737620:CDS |
| ATATAATATATTCCTCAAGC+AGG | 0.589592 | 5_1:+54897885 | Msa0737620:CDS |
| CAATGAAGATTATGCAAAGG+TGG | 0.590284 | 5_1:+54897164 | Msa0737620:CDS |
| AGTTTAAAATCCAAGTCGAC+CGG | 0.590480 | 5_1:-54893665 | None:intergenic |
| GCTGATCATCAGGACATATG+TGG | 0.590919 | 5_1:+54897925 | Msa0737620:CDS |
| GTCGAGCACACTCCTGCTTG+AGG | 0.592986 | 5_1:-54892946 | None:intergenic |
| GAGCACTGAAGATCTTGAGA+GGG | 0.594444 | 5_1:+54893559 | Msa0737620:CDS |
| AAAGAAAAGAAGAAACATAG+AGG | 0.596397 | 5_1:+54893225 | Msa0737620:CDS |
| AGAGCACTGAAGATCTTGAG+AGG | 0.596789 | 5_1:+54893558 | Msa0737620:CDS |
| GAAACATAGAGGTGTTCCAA+GGG | 0.597227 | 5_1:+54893236 | Msa0737620:CDS |
| GATCCAAAAGAGCACTGAAG+AGG | 0.602064 | 5_1:+54898166 | Msa0737620:CDS |
| TGGCAGAGAAATTGTAGACA+TGG | 0.605105 | 5_1:+54897945 | Msa0737620:CDS |
| AGAAACATAGAGGTGTTCCA+AGG | 0.610697 | 5_1:+54893235 | Msa0737620:CDS |
| TTTCATGTAGCCATATGAAG+AGG | 0.611306 | 5_1:+54893490 | Msa0737620:intron |
| AAAGCTCAGCGAGCTTACGA+TGG | 0.613544 | 5_1:-54891076 | None:intergenic |
| CACTAATTGAGATAAACTAA+GGG | 0.621885 | 5_1:-54897139 | None:intergenic |
| GCTTATCATCAGGACGTAGG+TGG | 0.622815 | 5_1:+54892974 | Msa0737620:CDS |
| AATTTGATTAGAGTAGTCCT+CGG | 0.623111 | 5_1:-54897196 | None:intergenic |
| GGACAATGAAGATTATGCAA+AGG | 0.624602 | 5_1:+54897161 | Msa0737620:CDS |
| CATTAATTGAGTTAAACTAG+TGG | 0.627432 | 5_1:-54892193 | None:intergenic |
| GGAATTAGTAGTGATGGAGA+TGG | 0.631774 | 5_1:+54890962 | Msa0737620:CDS |
| AAAGGAATTAGAGATGGAGA+TGG | 0.637239 | 5_1:+54891025 | Msa0737620:CDS |
| AATTTGACTAAAGTAGTCCT+CGG | 0.641166 | 5_1:-54892250 | None:intergenic |
| TTGGAATAAGTTGTCAGACA+TGG | 0.642971 | 5_1:+54893027 | Msa0737620:CDS |
| TTGGAGGTCACGAAAAGAGG+AGG | 0.644365 | 5_1:+54891641 | Msa0737620:CDS |
| GGACGATCAAGATTATCAGA+AGG | 0.646995 | 5_1:+54892215 | Msa0737620:CDS |
| CGATCAAGATTATCAGAAGG+CGG | 0.656535 | 5_1:+54892218 | Msa0737620:CDS |
| GAAAAGAGGAGGTTATTACC+AGG | 0.660559 | 5_1:+54891652 | Msa0737620:CDS |
| TTGGAACAAGTTGTCAGACA+AGG | 0.660817 | 5_1:+54897978 | Msa0737620:CDS |
| ACATGAGATTGAATCCAGAA+GGG | 0.670630 | 5_1:-54891103 | None:intergenic |
| AAAGAAAAGAAGAAACGGAG+AGG | 0.672313 | 5_1:+54892890 | Msa0737620:CDS |
| AAAGCTTATCATCAGGACGT+AGG | 0.684875 | 5_1:+54892971 | Msa0737620:CDS |
| GGTGCTCCAATAGGACAGAG+TGG | 0.688534 | 5_1:+54892911 | Msa0737620:CDS |
| CGTGCTCCAATAGGTCAGAG+TGG | 0.690376 | 5_1:+54897862 | Msa0737620:CDS |
| GTTGATCAAGAAAAGAAATG+GGG | 0.707030 | 5_1:+54891844 | Msa0737620:CDS |
| GAAGGCGGCAAAGATATCCG+AGG | 0.713448 | 5_1:+54892233 | Msa0737620:CDS |
| AAACATAGAGGTGTTCCAAG+GGG | 0.716007 | 5_1:+54893237 | Msa0737620:CDS |
| GAAGAGAGACCTATTGTGTG+TGG | 0.716478 | 5_1:+54893584 | Msa0737620:CDS |
| AAAGGTGGCAAAGATATCCG+AGG | 0.717174 | 5_1:+54897179 | Msa0737620:CDS |
| TACGATGGAAGCTCTCAGTG+AGG | 0.727693 | 5_1:-54891061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATAAGAGTTTTAAATA+TGG | + | chr5_1:54892681-54892700 | Msa0737620:intron | 10.0% |
| !! | AATTATGTATATAACTATAA+AGG | + | chr5_1:54894023-54894042 | Msa0737620:intron | 10.0% |
| !! | CAATTGTTAAAATAATAAAT+TGG | + | chr5_1:54894476-54894495 | Msa0737620:intron | 10.0% |
| !!! | TTCAAAAAAATAGATTTTTA+TGG | + | chr5_1:54894792-54894811 | Msa0737620:intron | 10.0% |
| !!! | TCAAAAAAATAGATTTTTAT+GGG | + | chr5_1:54894793-54894812 | Msa0737620:intron | 10.0% |
| !!! | AGTTTATAATTTTATTTGAC+TGG | + | chr5_1:54892047-54892066 | Msa0737620:intron | 15.0% |
| !! | TATATAGAAAGAAGAATTTA+AGG | - | chr5_1:54892145-54892164 | None:intergenic | 15.0% |
| !! | TTAAATTCTTCTTTCTATAT+AGG | + | chr5_1:54892144-54892163 | Msa0737620:intron | 15.0% |
| !!! | AAAGATATAGAATTTTAATG+AGG | + | chr5_1:54892282-54892301 | Msa0737620:intron | 15.0% |
| !! | TCATAAAAAAAATACAACTT+TGG | + | chr5_1:54892405-54892424 | Msa0737620:intron | 15.0% |
| !!! | TATGTAATGCAAAATTTTAT+TGG | + | chr5_1:54894073-54894092 | Msa0737620:intron | 15.0% |
| !!! | ATTATTTTTGGATAGAAATT+TGG | + | chr5_1:54894228-54894247 | Msa0737620:intron | 15.0% |
| !!! | GAAAAAAGTGATTTTTTTAA+GGG | - | chr5_1:54894603-54894622 | None:intergenic | 15.0% |
| !!! | TGAAAAAAGTGATTTTTTTA+AGG | - | chr5_1:54894604-54894623 | None:intergenic | 15.0% |
| !!! | TATATAACAAGGTATTATTT+AGG | - | chr5_1:54895249-54895268 | None:intergenic | 15.0% |
| !!! | GTGTTTTTAGAATTTTTTTT+TGG | + | chr5_1:54895472-54895491 | Msa0737620:intron | 15.0% |
| !!! | TTTTTAGAATTTTTTTTTGG+AGG | + | chr5_1:54895475-54895494 | Msa0737620:intron | 15.0% |
| !!! | TTTTAGAATTTTTTTTTGGA+GGG | + | chr5_1:54895476-54895495 | Msa0737620:intron | 15.0% |
| !!! | TAATAAATTGATTTTCAAGA+CGG | + | chr5_1:54895588-54895607 | Msa0737620:intron | 15.0% |
| !! | TGAATTAAAGCAAAAATTAT+TGG | - | chr5_1:54896639-54896658 | None:intergenic | 15.0% |
| !!! | TATAATTTTACTTGACTAAT+TGG | + | chr5_1:54897005-54897024 | Msa0737620:intron | 15.0% |
| !!! | TTATGATACTTATTTTGAAT+CGG | - | chr5_1:54892391-54892410 | None:intergenic | 15.0% |
| !!! | GAAAAAATCTCATTTTCATA+AGG | - | chr5_1:54890990-54891009 | None:intergenic | 20.0% |
| !!! | AAATGAGATTTTTTCATCAA+TGG | + | chr5_1:54890995-54891014 | Msa0737620:CDS | 20.0% |
| !! | TTCATATTCATTAATTGATG+TGG | - | chr5_1:54891428-54891447 | None:intergenic | 20.0% |
| !! | CATCTTAGAAAATTCATATA+AGG | - | chr5_1:54891804-54891823 | None:intergenic | 20.0% |
| !!! | TATAATTTTATTTGACTGGT+CGG | + | chr5_1:54892051-54892070 | Msa0737620:intron | 20.0% |
| !!! | ATTGTATTATGTTTGCATTT+TGG | + | chr5_1:54892107-54892126 | Msa0737620:intron | 20.0% |
| !!! | TATGATACTTATTTTGAATC+AGG | - | chr5_1:54892390-54892409 | None:intergenic | 20.0% |
| !! | ACATGAAAAGTAATTAGAAA+TGG | - | chr5_1:54893143-54893162 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTTTCTTTGTTAT+TGG | - | chr5_1:54893220-54893239 | None:intergenic | 20.0% |
| !!! | AACTTTGAGTTACAAAAAAA+CGG | - | chr5_1:54893852-54893871 | None:intergenic | 20.0% |
| !! | GATATAAAACATTGTGAAAT+TGG | - | chr5_1:54894457-54894476 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+AGG | + | chr5_1:54894621-54894640 | Msa0737620:intron | 20.0% |
| !! | ATTAACACACTTCAAAAAAA+GGG | - | chr5_1:54895116-54895135 | None:intergenic | 20.0% |
| !! | AATTAACACACTTCAAAAAA+AGG | - | chr5_1:54895117-54895136 | None:intergenic | 20.0% |
| !! | TTTGTACTCTAAATATTAGA+AGG | + | chr5_1:54895384-54895403 | Msa0737620:intron | 20.0% |
| !! | TCGGTTTATACTTATATAAA+AGG | + | chr5_1:54895563-54895582 | Msa0737620:intron | 20.0% |
| !! | CGGTTTATACTTATATAAAA+GGG | + | chr5_1:54895564-54895583 | Msa0737620:intron | 20.0% |
| !! | GGTTTATACTTATATAAAAG+GGG | + | chr5_1:54895565-54895584 | Msa0737620:intron | 20.0% |
| !!! | AATAAATTGATTTTCAAGAC+GGG | + | chr5_1:54895589-54895608 | Msa0737620:intron | 20.0% |
| !!! | GACAATATTTTTTTGTTTGA+TGG | - | chr5_1:54895871-54895890 | None:intergenic | 20.0% |
| !! | TTTGAAAATGGTTATGAAAT+TGG | + | chr5_1:54896186-54896205 | Msa0737620:intron | 20.0% |
| !! | CATGTAATTGAAATATGAAA+TGG | + | chr5_1:54896492-54896511 | Msa0737620:intron | 20.0% |
| !!! | AAGGATATACAGTTTTATAT+AGG | + | chr5_1:54896958-54896977 | Msa0737620:intron | 20.0% |
| !!! | ATAAAGATACAATTTTTACG+AGG | + | chr5_1:54897226-54897245 | Msa0737620:intron | 20.0% |
| !!! | TAAAGATACAATTTTTACGA+GGG | + | chr5_1:54897227-54897246 | Msa0737620:intron | 20.0% |
| !! | ATCATAACAGAATACAAATT+TGG | + | chr5_1:54897347-54897366 | Msa0737620:intron | 20.0% |
| !! | TAAATACATAAAGTAGCAAA+CGG | - | chr5_1:54897430-54897449 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTGTTATTTGT+GGG | - | chr5_1:54897832-54897851 | None:intergenic | 20.0% |
| !! | ATAACAAAGAAAAGAAGAAA+CGG | + | chr5_1:54893220-54893239 | Msa0737620:CDS | 20.0% |
| !! | ACATGAAAAGTAATTAGAAA+TGG | - | chr5_1:54893143-54893162 | None:intergenic | 20.0% |
| ! | AATGAGAAAGAGATTAAAGA+AGG | - | chr5_1:54891145-54891164 | None:intergenic | 25.0% |
| !!! | AATGTCTTTTTCTAGTCTAT+CGG | + | chr5_1:54891285-54891304 | Msa0737620:intron | 25.0% |
| !! | GTAAAACAACCTTATACTTT+TGG | + | chr5_1:54891491-54891510 | Msa0737620:intron | 25.0% |
| !! | TAGTATACACCAAAAGTATA+AGG | - | chr5_1:54891503-54891522 | None:intergenic | 25.0% |
| ! | AAGGATATATATTCATTCAG+AGG | - | chr5_1:54891785-54891804 | None:intergenic | 25.0% |
| ! | TGTTAATATGCTATTATTGC+AGG | + | chr5_1:54891822-54891841 | Msa0737620:intron | 25.0% |
| ! | CATTAATTGAGTTAAACTAG+TGG | - | chr5_1:54892196-54892215 | None:intergenic | 25.0% |
| !! | CACTAGTTTAACTCAATTAA+TGG | + | chr5_1:54892194-54892213 | Msa0737620:CDS | 25.0% |
| ! | ACAATTGATCAATTCACTAT+AGG | + | chr5_1:54892437-54892456 | Msa0737620:intron | 25.0% |
| ! | AAATACATATAGTAGCAAAC+AGG | - | chr5_1:54892496-54892515 | None:intergenic | 25.0% |
| ! | TGTATTTATTATCTGCACTA+TGG | + | chr5_1:54892509-54892528 | Msa0737620:intron | 25.0% |
| !! | TTAGTAACTCAATGATTTGT+TGG | + | chr5_1:54892545-54892564 | Msa0737620:intron | 25.0% |
| !! | ATTTGTTGGAAGAGTTTAAA+GGG | + | chr5_1:54892559-54892578 | Msa0737620:intron | 25.0% |
| ! | ACAATCCAAATTCAGTTTAA+AGG | + | chr5_1:54892770-54892789 | Msa0737620:intron | 25.0% |
| ! | AGAACAAAGAAAAGAAGAAA+CGG | + | chr5_1:54892885-54892904 | Msa0737620:CDS | 25.0% |
| ! | ATATAATATATTCCTCAAGC+AGG | + | chr5_1:54892934-54892953 | Msa0737620:CDS | 25.0% |
| !!! | TTCTTTTCTTTGTTATTGGT+GGG | - | chr5_1:54893216-54893235 | None:intergenic | 25.0% |
| ! | AAAGAAAAGAAGAAACATAG+AGG | + | chr5_1:54893225-54893244 | Msa0737620:CDS | 25.0% |
| ! | ACATGAAATGTAATTACAAG+TGG | - | chr5_1:54893478-54893497 | None:intergenic | 25.0% |
| !! | ACTTTGAGTTACAAAAAAAC+GGG | - | chr5_1:54893851-54893870 | None:intergenic | 25.0% |
| !! | AATGCAAAATTTTATTGGCA+TGG | + | chr5_1:54894078-54894097 | Msa0737620:intron | 25.0% |
| !! | ATGTTATTCTAGAAAACAGA+TGG | + | chr5_1:54894180-54894199 | Msa0737620:intron | 25.0% |
| !! | TGTTATTCTAGAAAACAGAT+GGG | + | chr5_1:54894181-54894200 | Msa0737620:intron | 25.0% |
| !! | GCATTTGCACAAATTATTTT+TGG | + | chr5_1:54894216-54894235 | Msa0737620:intron | 25.0% |
| ! | ATTTGGAAAATGAAACTGAT+AGG | + | chr5_1:54894262-54894281 | Msa0737620:intron | 25.0% |
| !! | AAGTTGATTCACATTATTGA+TGG | + | chr5_1:54894324-54894343 | Msa0737620:intron | 25.0% |
| ! | TACACAGATAAAAAGAAAAG+TGG | - | chr5_1:54894366-54894385 | None:intergenic | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | - | chr5_1:54894688-54894707 | None:intergenic | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | - | chr5_1:54894689-54894708 | None:intergenic | 25.0% |
| ! | TACTCTAAATATTAGAAGGT+TGG | + | chr5_1:54895388-54895407 | Msa0737620:intron | 25.0% |
| ! | AGTGAAATGATGTAAGATTT+CGG | + | chr5_1:54895544-54895563 | Msa0737620:intron | 25.0% |
| !! | TTTTTCCCAATTTCAAAACA+TGG | - | chr5_1:54895667-54895686 | None:intergenic | 25.0% |
| ! | TCAAATTTAGGAAACATGTT+TGG | - | chr5_1:54895906-54895925 | None:intergenic | 25.0% |
| ! | TTTGTGCATGTTTCAAATTT+AGG | - | chr5_1:54895918-54895937 | None:intergenic | 25.0% |
| !! | TGTTAATGTCTTTTACAGTT+TGG | + | chr5_1:54895996-54896015 | Msa0737620:intron | 25.0% |
| !! | GTTAATGTCTTTTACAGTTT+GGG | + | chr5_1:54895997-54896016 | Msa0737620:intron | 25.0% |
| !!! | GAAAAAACCACTTTTGAAAA+TGG | + | chr5_1:54896174-54896193 | Msa0737620:intron | 25.0% |
| !! | TTCATAACCATTTTCAAAAG+TGG | - | chr5_1:54896184-54896203 | None:intergenic | 25.0% |
| ! | TAAAAATAAGCTCCAAATCA+GGG | - | chr5_1:54896354-54896373 | None:intergenic | 25.0% |
| !!! | TTTTAGAGTTTTGCCTATAA+AGG | + | chr5_1:54896369-54896388 | Msa0737620:intron | 25.0% |
| ! | ATTGACAAAAAAAAAAAGCG+TGG | + | chr5_1:54896548-54896567 | Msa0737620:intron | 25.0% |
| ! | CACTAATTGAGATAAACTAA+GGG | - | chr5_1:54897142-54897161 | None:intergenic | 25.0% |
| !!! | GATTTGTTGAAAGAGTTTAA+CGG | + | chr5_1:54897491-54897510 | Msa0737620:intron | 25.0% |
| !! | ATTTGTTGAAAGAGTTTAAC+GGG | + | chr5_1:54897492-54897511 | Msa0737620:intron | 25.0% |
| ! | ATCAAAATCTGCAAAGAAAT+TGG | - | chr5_1:54897579-54897598 | None:intergenic | 25.0% |
| !!! | AGCTACTTTTAATCTGAATT+TGG | - | chr5_1:54897716-54897735 | None:intergenic | 25.0% |
| !!! | CTTCTTTTCTTTGTTATTTG+TGG | - | chr5_1:54897833-54897852 | None:intergenic | 25.0% |
| ! | ATATAATATATTCCTCAAGC+AGG | + | chr5_1:54892934-54892953 | Msa0737620:CDS | 25.0% |
| GAACATGCAAACGAAAAAAA+TGG | - | chr5_1:54891179-54891198 | None:intergenic | 30.0% | |
| CCAAATAGAATTGGAAAAAG+AGG | - | chr5_1:54891575-54891594 | None:intergenic | 30.0% | |
| ! | CCTCTTTTTCCAATTCTATT+TGG | + | chr5_1:54891572-54891591 | Msa0737620:intron | 30.0% |
| TCAAATCTGCCAAATAGAAT+TGG | - | chr5_1:54891584-54891603 | None:intergenic | 30.0% | |
| ! | ACAAGTCAATGGATGATTTT+CGG | - | chr5_1:54891610-54891629 | None:intergenic | 30.0% |
| ATTGCTAAAAACAATGTACC+TGG | - | chr5_1:54891673-54891692 | None:intergenic | 30.0% | |
| ! | AGGTTGATCAAGAAAAGAAA+TGG | + | chr5_1:54891842-54891861 | Msa0737620:intron | 30.0% |
| GGTTGATCAAGAAAAGAAAT+GGG | + | chr5_1:54891843-54891862 | Msa0737620:intron | 30.0% | |
| GTTGATCAAGAAAAGAAATG+GGG | + | chr5_1:54891844-54891863 | Msa0737620:CDS | 30.0% | |
| ! | TTAAACTAGTGGTTGAGTTT+TGG | - | chr5_1:54892185-54892204 | None:intergenic | 30.0% |
| AATTTGACTAAAGTAGTCCT+CGG | - | chr5_1:54892253-54892272 | None:intergenic | 30.0% | |
| GACTACTTTAGTCAAATTAC+AGG | + | chr5_1:54892255-54892274 | Msa0737620:CDS | 30.0% | |
| ATGAGGAAAACTGAATTCAT+CGG | + | chr5_1:54892299-54892318 | Msa0737620:intron | 30.0% | |
| ATCAATTCACTATAGGTCTA+TGG | + | chr5_1:54892444-54892463 | Msa0737620:intron | 30.0% | |
| ! | ATATAGTAGCAAACAGGTTT+TGG | - | chr5_1:54892490-54892509 | None:intergenic | 30.0% |
| !! | GATTTGTTGGAAGAGTTTAA+AGG | + | chr5_1:54892558-54892577 | Msa0737620:intron | 30.0% |
| AGTTTAAAGGGATTTGGATT+CGG | + | chr5_1:54892571-54892590 | Msa0737620:intron | 30.0% | |
| TCAAAATCTGCAAAGAAATC+TGG | - | chr5_1:54892646-54892665 | None:intergenic | 30.0% | |
| ATCCAAATTCAGTTTAAAGG+TGG | + | chr5_1:54892773-54892792 | Msa0737620:intron | 30.0% | |
| TGGATATCAAGAATTTCAAG+TGG | + | chr5_1:54892829-54892848 | Msa0737620:intron | 30.0% | |
| ! | TTCTTTTCTTTGTTCTTTGC+GGG | - | chr5_1:54892866-54892885 | None:intergenic | 30.0% |
| ! | CTTCTTTTCTTTGTTCTTTG+CGG | - | chr5_1:54892867-54892886 | None:intergenic | 30.0% |
| TGGAAGAAAAATCATAGAGA+TGG | + | chr5_1:54892994-54893013 | Msa0737620:CDS | 30.0% | |
| !!! | CTTCTTTTCTTTGTTATTGG+TGG | - | chr5_1:54893217-54893236 | None:intergenic | 30.0% |
| AAAGCTGATCATCAGTTTAA+AGG | + | chr5_1:54893309-54893328 | Msa0737620:CDS | 30.0% | |
| !! | TATCGTACCAGTTTTTCAAT+GGG | - | chr5_1:54893378-54893397 | None:intergenic | 30.0% |
| !! | TTATCGTACCAGTTTTTCAA+TGG | - | chr5_1:54893379-54893398 | None:intergenic | 30.0% |
| GATAATCATTCAAATCACCT+GGG | - | chr5_1:54893721-54893740 | None:intergenic | 30.0% | |
| AATAGCAACAAGAATTGCTT+TGG | + | chr5_1:54893998-54894017 | Msa0737620:intron | 30.0% | |
| ! | GTTATTCTAGAAAACAGATG+GGG | + | chr5_1:54894182-54894201 | Msa0737620:intron | 30.0% |
| ATTTGGATGAAACCTGTATT+TGG | + | chr5_1:54894245-54894264 | Msa0737620:intron | 30.0% | |
| ! | CAGTTTCATTTTCCAAATAC+AGG | - | chr5_1:54894260-54894279 | None:intergenic | 30.0% |
| AAAGTGGTATATACTTCAAG+AGG | - | chr5_1:54894350-54894369 | None:intergenic | 30.0% | |
| ! | TTTTTATCTGTGTACACACA+AGG | + | chr5_1:54894372-54894391 | Msa0737620:intron | 30.0% |
| CCAACTCTCTTAGATATATA+GGG | - | chr5_1:54894503-54894522 | None:intergenic | 30.0% | |
| TCCAACTCTCTTAGATATAT+AGG | - | chr5_1:54894504-54894523 | None:intergenic | 30.0% | |
| ! | GGAAAAAATCTGAAACAAAC+AGG | - | chr5_1:54894582-54894601 | None:intergenic | 30.0% |
| CCCTAAAATGAAAAGCTATT+AGG | + | chr5_1:54894685-54894704 | Msa0737620:intron | 30.0% | |
| ! | AGATTTTTATGGGTAGTAGT+AGG | + | chr5_1:54894803-54894822 | Msa0737620:intron | 30.0% |
| ! | AGAACTAGTGGACAATTAAA+GGG | - | chr5_1:54894918-54894937 | None:intergenic | 30.0% |
| ! | TAGAACTAGTGGACAATTAA+AGG | - | chr5_1:54894919-54894938 | None:intergenic | 30.0% |
| ATGATATTGAGCTTAAGTCT+TGG | - | chr5_1:54895063-54895082 | None:intergenic | 30.0% | |
| AGACTTAAGCTCAATATCAT+TGG | + | chr5_1:54895063-54895082 | Msa0737620:intron | 30.0% | |
| ! | GTGTGTTAATTTGATCAAGA+AGG | + | chr5_1:54895126-54895145 | Msa0737620:intron | 30.0% |
| ! | TGTTAATTTGATCAAGAAGG+AGG | + | chr5_1:54895129-54895148 | Msa0737620:intron | 30.0% |
| CGGATAGATTATACAATGTA+TGG | + | chr5_1:54895278-54895297 | Msa0737620:intron | 30.0% | |
| TACAATGTATGGATGAATCT+TGG | + | chr5_1:54895289-54895308 | Msa0737620:intron | 30.0% | |
| ! | TATTAGAAGGTTGGCTAAAA+AGG | + | chr5_1:54895397-54895416 | Msa0737620:intron | 30.0% |
| TCTTCAAGAAGTTAAGAATG+AGG | + | chr5_1:54895433-54895452 | Msa0737620:intron | 30.0% | |
| !!! | TAGAATTTTTTTTTGGAGGG+AGG | + | chr5_1:54895479-54895498 | Msa0737620:intron | 30.0% |
| !!! | AGAATTTTTTTTTGGAGGGA+GGG | + | chr5_1:54895480-54895499 | Msa0737620:intron | 30.0% |
| !!! | TCGTAACCATGTTTTGAAAT+TGG | + | chr5_1:54895658-54895677 | Msa0737620:intron | 30.0% |
| !!! | CGTAACCATGTTTTGAAATT+GGG | + | chr5_1:54895659-54895678 | Msa0737620:intron | 30.0% |
| !! | TTAGGAAACATGTTTGGTTT+TGG | - | chr5_1:54895900-54895919 | None:intergenic | 30.0% |
| ATGAAATTGGAGATTGAAGA+AGG | + | chr5_1:54896199-54896218 | Msa0737620:intron | 30.0% | |
| AAAAATAAGCTCCAAATCAG+GGG | - | chr5_1:54896353-54896372 | None:intergenic | 30.0% | |
| CTAAAAATAAGCTCCAAATC+AGG | - | chr5_1:54896355-54896374 | None:intergenic | 30.0% | |
| ! | AGTTTTGCCTATAAAGGAAA+GGG | + | chr5_1:54896375-54896394 | Msa0737620:intron | 30.0% |
| TTAGATTCCCTTTCCTTTAT+AGG | - | chr5_1:54896385-54896404 | None:intergenic | 30.0% | |
| TGAGAGCAACTAAAAATTTG+TGG | - | chr5_1:54896474-54896493 | None:intergenic | 30.0% | |
| ! | ACAAAAAAAAAAAGCGTGGT+AGG | + | chr5_1:54896552-54896571 | Msa0737620:intron | 30.0% |
| CACTTCAAATTAAATACCCA+GGG | - | chr5_1:54896796-54896815 | None:intergenic | 30.0% | |
| ACACTTCAAATTAAATACCC+AGG | - | chr5_1:54896797-54896816 | None:intergenic | 30.0% | |
| !! | GGGTATTTAATTTGAAGTGT+CGG | + | chr5_1:54896797-54896816 | Msa0737620:intron | 30.0% |
| !! | TTTGAAGTGTCGGTTTATAT+AGG | + | chr5_1:54896807-54896826 | Msa0737620:intron | 30.0% |
| ATCAAATTCTTCTACCTGTT+AGG | + | chr5_1:54896842-54896861 | Msa0737620:intron | 30.0% | |
| ACCTTAAATTCTCCTTTCTA+AGG | + | chr5_1:54897090-54897109 | Msa0737620:intron | 30.0% | |
| ACCTTAGAAAGGAGAATTTA+AGG | - | chr5_1:54897094-54897113 | None:intergenic | 30.0% | |
| CCACTAATTGAGATAAACTA+AGG | - | chr5_1:54897143-54897162 | None:intergenic | 30.0% | |
| CCTTAGTTTATCTCAATTAG+TGG | + | chr5_1:54897140-54897159 | Msa0737620:CDS | 30.0% | |
| AATTTGATTAGAGTAGTCCT+CGG | - | chr5_1:54897199-54897218 | None:intergenic | 30.0% | |
| GACTACTCTAATCAAATTAC+TGG | + | chr5_1:54897201-54897220 | Msa0737620:CDS | 30.0% | |
| ! | TAAAACACGAGTTTGAAGTA+TGG | + | chr5_1:54897614-54897633 | Msa0737620:intron | 30.0% |
| TTTGGATTCTTACTTAAAGC+AGG | + | chr5_1:54897769-54897788 | Msa0737620:intron | 30.0% | |
| AACAGGTACAGTAAATGAAT+TGG | + | chr5_1:54893053-54893072 | Msa0737620:intron | 30.0% | |
| TTTCATGTAGCCATATGAAA+AGG | + | chr5_1:54898106-54898125 | Msa0737620:intron | 30.0% | |
| AGGAAAGGAATTAGTAGTGA+TGG | + | chr5_1:54890956-54890975 | Msa0737620:CDS | 35.0% | |
| TTCATCAATGGAAGAAGCAA+AGG | + | chr5_1:54891007-54891026 | Msa0737620:CDS | 35.0% | |
| AGAAGCAAAGGAATTAGAGA+TGG | + | chr5_1:54891019-54891038 | Msa0737620:CDS | 35.0% | |
| AAAGGAATTAGAGATGGAGA+TGG | + | chr5_1:54891025-54891044 | Msa0737620:CDS | 35.0% | |
| CTCTCAGTGAGGATATAATA+TGG | - | chr5_1:54891053-54891072 | None:intergenic | 35.0% | |
| ACATGAGATTGAATCCAGAA+GGG | - | chr5_1:54891106-54891125 | None:intergenic | 35.0% | |
| AACATGAGATTGAATCCAGA+AGG | - | chr5_1:54891107-54891126 | None:intergenic | 35.0% | |
| ! | TTCGTTTGCATGTTCTGTTT+TGG | + | chr5_1:54891184-54891203 | Msa0737620:intron | 35.0% |
| TGAAGAGAATGACATGCAAA+CGG | - | chr5_1:54891226-54891245 | None:intergenic | 35.0% | |
| ! | TTCTCTTCACTGTTCTGTTT+TGG | + | chr5_1:54891237-54891256 | Msa0737620:intron | 35.0% |
| GTAAAACAGGTACAAGTCAA+TGG | - | chr5_1:54891621-54891640 | None:intergenic | 35.0% | |
| !! | TGACTTGTACCTGTTTTACT+TGG | + | chr5_1:54891622-54891641 | Msa0737620:CDS | 35.0% |
| TATGTAGCTTCTTACCAACA+AGG | + | chr5_1:54891711-54891730 | Msa0737620:intron | 35.0% | |
| !! | AGTTGTTTCTGCACTAAAAC+TGG | + | chr5_1:54891870-54891889 | Msa0737620:CDS | 35.0% |
| TTGAGACATTGTACTTCTAC+AGG | + | chr5_1:54891956-54891975 | Msa0737620:CDS | 35.0% | |
| TCTATATAGGTCCAGTTGAA+AGG | + | chr5_1:54892157-54892176 | Msa0737620:intron | 35.0% | |
| TGGAAGAGTTTAAAGGGATT+TGG | + | chr5_1:54892565-54892584 | Msa0737620:intron | 35.0% | |
| !! | ACCAACGATATGGTTGATTT+TGG | - | chr5_1:54892602-54892621 | None:intergenic | 35.0% |
| AAAATCAACCATATCGTTGG+TGG | + | chr5_1:54892601-54892620 | Msa0737620:intron | 35.0% | |
| AGCCACCTTTAAACTGAATT+TGG | - | chr5_1:54892778-54892797 | None:intergenic | 35.0% | |
| AAAGAAAAGAAGAAACGGAG+AGG | + | chr5_1:54892890-54892909 | Msa0737620:CDS | 35.0% | |
| TTATATCCACTCTGTCCTAT+TGG | - | chr5_1:54892920-54892939 | None:intergenic | 35.0% | |
| TCGACTTAAAGCTTATCATC+AGG | + | chr5_1:54892964-54892983 | Msa0737620:CDS | 35.0% | |
| TTGGAATAAGTTGTCAGACA+TGG | + | chr5_1:54893027-54893046 | Msa0737620:CDS | 35.0% | |
| TTTCATGTAGCCATATGAAG+AGG | + | chr5_1:54893155-54893174 | Msa0737620:intron | 35.0% | |
| TAAAGGTGACCGAAAAATCA+CGG | + | chr5_1:54893326-54893345 | Msa0737620:CDS | 35.0% | |
| ! | CATCAATAGCCGTGATTTTT+CGG | - | chr5_1:54893338-54893357 | None:intergenic | 35.0% |
| !! | ATCGTACCAGTTTTTCAATG+GGG | - | chr5_1:54893377-54893396 | None:intergenic | 35.0% |
| TTTCATGTAGCCATATGAAG+AGG | + | chr5_1:54893155-54893174 | Msa0737620:intron | 35.0% | |
| TTCATGCTTTCCTCTTCATA+TGG | - | chr5_1:54893503-54893522 | None:intergenic | 35.0% | |
| ! | AGAGGAAAGCATGAAGATAA+AGG | + | chr5_1:54893508-54893527 | Msa0737620:CDS | 35.0% |
| CCAAAAGAGTAGTTTGATAG+AGG | - | chr5_1:54893635-54893654 | None:intergenic | 35.0% | |
| ! | CCTCTATCAAACTACTCTTT+TGG | + | chr5_1:54893632-54893651 | Msa0737620:CDS | 35.0% |
| ! | AGTTTAAAATCCAAGTCGAC+CGG | - | chr5_1:54893668-54893687 | None:intergenic | 35.0% |
| TTCAAATCACCTGGGAAAAA+GGG | - | chr5_1:54893713-54893732 | None:intergenic | 35.0% | |
| ATTCAAATCACCTGGGAAAA+AGG | - | chr5_1:54893714-54893733 | None:intergenic | 35.0% | |
| CGATAATCATTCAAATCACC+TGG | - | chr5_1:54893722-54893741 | None:intergenic | 35.0% | |
| !!! | CTTAGCTGCTTTTGTGTTTA+TGG | + | chr5_1:54893874-54893893 | Msa0737620:intron | 35.0% |
| TTTGAAAGAGCAACAAGCAT+TGG | + | chr5_1:54893898-54893917 | Msa0737620:intron | 35.0% | |
| GAAAATGAAACTGATAGGTC+TGG | + | chr5_1:54894267-54894286 | Msa0737620:intron | 35.0% | |
| CCCTATATATCTAAGAGAGT+TGG | + | chr5_1:54894500-54894519 | Msa0737620:intron | 35.0% | |
| GGAAATGTTAGTTCAAGTCT+TGG | - | chr5_1:54894548-54894567 | None:intergenic | 35.0% | |
| AACTAACATTTCCACGACTT+TGG | + | chr5_1:54894555-54894574 | Msa0737620:intron | 35.0% | |
| ACTAACATTTCCACGACTTT+GGG | + | chr5_1:54894556-54894575 | Msa0737620:intron | 35.0% | |
| !! | TCCACTAGTTCTAAATCAAC+CGG | + | chr5_1:54894926-54894945 | Msa0737620:intron | 35.0% |
| AATCAACCGGTAAAACTAGT+AGG | + | chr5_1:54894939-54894958 | Msa0737620:intron | 35.0% | |
| ! | AGAATTTAGGATTCGAACTC+CGG | - | chr5_1:54894976-54894995 | None:intergenic | 35.0% |
| TACACACAAGTGGAGAATTT+AGG | - | chr5_1:54894989-54895008 | None:intergenic | 35.0% | |
| TAGAAACTCATACACACAAG+TGG | - | chr5_1:54894999-54895018 | None:intergenic | 35.0% | |
| !!! | CTTTCTCGTCAACTTTTTCA+GGG | - | chr5_1:54895158-54895177 | None:intergenic | 35.0% |
| !! | TCTTTCTCGTCAACTTTTTC+AGG | - | chr5_1:54895159-54895178 | None:intergenic | 35.0% |
| ! | CTTGTTATATAGAGCTGAAG+CGG | + | chr5_1:54895258-54895277 | Msa0737620:intron | 35.0% |
| ! | GTGTTACTAGCAATGAAGAA+AGG | + | chr5_1:54895311-54895330 | Msa0737620:intron | 35.0% |
| TCAAGAAGTTAAGAATGAGG+CGG | + | chr5_1:54895436-54895455 | Msa0737620:intron | 35.0% | |
| !!! | GAATTTTTTTTTGGAGGGAG+GGG | + | chr5_1:54895481-54895500 | Msa0737620:intron | 35.0% |
| !!! | AATTTTTTTTTGGAGGGAGG+GGG | + | chr5_1:54895482-54895501 | Msa0737620:intron | 35.0% |
| !! | ATTGATTTTCAAGACGGGTT+TGG | + | chr5_1:54895594-54895613 | Msa0737620:intron | 35.0% |
| !! | TTGATTTTCAAGACGGGTTT+GGG | + | chr5_1:54895595-54895614 | Msa0737620:intron | 35.0% |
| ! | AAAACCCGTTAAAATGGGTT+TGG | + | chr5_1:54895721-54895740 | Msa0737620:intron | 35.0% |
| ! | TCGAACCAAACCCATTTTAA+CGG | - | chr5_1:54895729-54895748 | None:intergenic | 35.0% |
| ACAGTGGTGTACAAAACAAA+AGG | + | chr5_1:54895787-54895806 | Msa0737620:intron | 35.0% | |
| ! | GTGTTTAAAGTTAAGTGGTC+TGG | - | chr5_1:54895844-54895863 | None:intergenic | 35.0% |
| ! | CGTATATTTTGCAGTGTATG+GGG | - | chr5_1:54896030-54896049 | None:intergenic | 35.0% |
| ! | CCGTATATTTTGCAGTGTAT+GGG | - | chr5_1:54896031-54896050 | None:intergenic | 35.0% |
| CCCATACACTGCAAAATATA+CGG | + | chr5_1:54896028-54896047 | Msa0737620:intron | 35.0% | |
| ! | ACCGTATATTTTGCAGTGTA+TGG | - | chr5_1:54896032-54896051 | None:intergenic | 35.0% |
| TTCTTCGTTGAATAAACCAC+CGG | - | chr5_1:54896298-54896317 | None:intergenic | 35.0% | |
| GGTTTATTCAACGAAGAAGA+AGG | + | chr5_1:54896300-54896319 | Msa0737620:intron | 35.0% | |
| AAAATAAGCTCCAAATCAGG+GGG | - | chr5_1:54896352-54896371 | None:intergenic | 35.0% | |
| ! | GAGTTTTGCCTATAAAGGAA+AGG | + | chr5_1:54896374-54896393 | Msa0737620:intron | 35.0% |
| ATATGTATGTGTTAGACCCT+GGG | + | chr5_1:54896777-54896796 | Msa0737620:intron | 35.0% | |
| TGACACTCTAATAACCTAAC+AGG | - | chr5_1:54896859-54896878 | None:intergenic | 35.0% | |
| TTGATCTTATTACCACTGCA+AGG | + | chr5_1:54896939-54896958 | Msa0737620:intron | 35.0% | |
| AAAACTGTATATCCTTGCAG+TGG | - | chr5_1:54896954-54896973 | None:intergenic | 35.0% | |
| !! | AATTCTCCTTTCTAAGGTTC+AGG | + | chr5_1:54897096-54897115 | Msa0737620:intron | 35.0% |
| GGACAATGAAGATTATGCAA+AGG | + | chr5_1:54897161-54897180 | Msa0737620:CDS | 35.0% | |
| CAATGAAGATTATGCAAAGG+TGG | + | chr5_1:54897164-54897183 | Msa0737620:CDS | 35.0% | |
| AGTAACCAAAGTGAATCGAT+CGG | - | chr5_1:54897386-54897405 | None:intergenic | 35.0% | |
| ! | CATAAAGTAGCAAACGGTTT+TGG | - | chr5_1:54897424-54897443 | None:intergenic | 35.0% |
| TGAAAGAGTTTAACGGGATT+TGG | + | chr5_1:54897498-54897517 | Msa0737620:intron | 35.0% | |
| ACCAAAATCAACCATATCGT+TGG | + | chr5_1:54897531-54897550 | Msa0737620:intron | 35.0% | |
| !! | ACCAACGATATGGTTGATTT+TGG | - | chr5_1:54892602-54892621 | None:intergenic | 35.0% |
| TTCTTACTTAAAGCAGGAGT+TGG | + | chr5_1:54897775-54897794 | Msa0737620:intron | 35.0% | |
| TTATATCCACTCTGACCTAT+TGG | - | chr5_1:54897871-54897890 | None:intergenic | 35.0% | |
| ! | TCCTTGCTTTCCTTTTCATA+TGG | - | chr5_1:54898119-54898138 | None:intergenic | 35.0% |
| AAAGGAAAGCAAGGAGATAA+AGG | + | chr5_1:54898124-54898143 | Msa0737620:CDS | 35.0% | |
| ! | GGAATTAGTAGTGATGGAGA+TGG | + | chr5_1:54890962-54890981 | Msa0737620:CDS | 40.0% |
| !!! | CTTCACTGTTCTGTTTTGGT+TGG | + | chr5_1:54891241-54891260 | Msa0737620:intron | 40.0% |
| ! | CTTGTACCTGTTTTACTTGG+AGG | + | chr5_1:54891625-54891644 | Msa0737620:CDS | 40.0% |
| GAAAAGAGGAGGTTATTACC+AGG | + | chr5_1:54891652-54891671 | Msa0737620:CDS | 40.0% | |
| ! | TTGCTAGATTCAAGCCTTGT+TGG | - | chr5_1:54891728-54891747 | None:intergenic | 40.0% |
| GTTTCTGCACTAAAACTGGA+AGG | + | chr5_1:54891874-54891893 | Msa0737620:CDS | 40.0% | |
| TGGCAGCAATACAGGTTAAT+TGG | + | chr5_1:54892002-54892021 | Msa0737620:intron | 40.0% | |
| CAGCAATACAGGTTAATTGG+CGG | + | chr5_1:54892005-54892024 | Msa0737620:intron | 40.0% | |
| !!! | GAGTTTTGGTTCCTTTCAAC+TGG | - | chr5_1:54892171-54892190 | None:intergenic | 40.0% |
| GGACGATCAAGATTATCAGA+AGG | + | chr5_1:54892215-54892234 | Msa0737620:CDS | 40.0% | |
| CGATCAAGATTATCAGAAGG+CGG | + | chr5_1:54892218-54892237 | Msa0737620:CDS | 40.0% | |
| GCCAAAATCAACCATATCGT+TGG | + | chr5_1:54892598-54892617 | Msa0737620:intron | 40.0% | |
| CTTTCAAACCACCAACGATA+TGG | - | chr5_1:54892612-54892631 | None:intergenic | 40.0% | |
| AAAGCTTATCATCAGGACGT+AGG | + | chr5_1:54892971-54892990 | Msa0737620:CDS | 40.0% | |
| TAGAGATGGCTATTGATGCT+TGG | + | chr5_1:54893008-54893027 | Msa0737620:CDS | 40.0% | |
| !! | AGAAACATAGAGGTGTTCCA+AGG | + | chr5_1:54893235-54893254 | Msa0737620:CDS | 40.0% |
| !! | GAAACATAGAGGTGTTCCAA+GGG | + | chr5_1:54893236-54893255 | Msa0737620:CDS | 40.0% |
| !! | AAACATAGAGGTGTTCCAAG+GGG | + | chr5_1:54893237-54893256 | Msa0737620:CDS | 40.0% |
| AAATCACGGCTATTGATGCT+TGG | + | chr5_1:54893340-54893359 | Msa0737620:CDS | 40.0% | |
| !! | TCGTACCAGTTTTTCAATGG+GGG | - | chr5_1:54893376-54893395 | None:intergenic | 40.0% |
| ! | CAAGATCTTCAGTGCTCTTT+TGG | - | chr5_1:54893556-54893575 | None:intergenic | 40.0% |
| TAGTAGTCACCACACACAAT+AGG | - | chr5_1:54893596-54893615 | None:intergenic | 40.0% | |
| ACTGACAGAAAAAACATCCG+AGG | + | chr5_1:54893685-54893704 | Msa0737620:CDS | 40.0% | |
| GTTCGTTAGATTTGCCAACT+GGG | + | chr5_1:54893741-54893760 | Msa0737620:intron | 40.0% | |
| TTCGTTAGATTTGCCAACTG+GGG | + | chr5_1:54893742-54893761 | Msa0737620:intron | 40.0% | |
| GACAACAAGTATAGTCACTC+GGG | - | chr5_1:54893770-54893789 | None:intergenic | 40.0% | |
| CGACAACAAGTATAGTCACT+CGG | - | chr5_1:54893771-54893790 | None:intergenic | 40.0% | |
| !! | CGAGTGACTATACTTGTTGT+CGG | + | chr5_1:54893769-54893788 | Msa0737620:intron | 40.0% |
| !! | GAGTGACTATACTTGTTGTC+GGG | + | chr5_1:54893770-54893789 | Msa0737620:intron | 40.0% |
| ! | TTGTCGGGTAAGTCTTTTTG+TGG | + | chr5_1:54893785-54893804 | Msa0737620:intron | 40.0% |
| CAAAAAAACGGGATAACCGT+TGG | - | chr5_1:54893840-54893859 | None:intergenic | 40.0% | |
| TCAACTTCAAGAACGTGCAA+GGG | - | chr5_1:54894311-54894330 | None:intergenic | 40.0% | |
| ATCAACTTCAAGAACGTGCA+AGG | - | chr5_1:54894312-54894331 | None:intergenic | 40.0% | |
| ! | ACCGGTTGATTTAGAACTAG+TGG | - | chr5_1:54894930-54894949 | None:intergenic | 40.0% |
| !!! | ATCCAGCCTACTAGTTTTAC+CGG | - | chr5_1:54894948-54894967 | None:intergenic | 40.0% |
| !! | TTGGTTAGTTTCAAGCACGA+AGG | + | chr5_1:54895082-54895101 | Msa0737620:intron | 40.0% |
| ! | ATCACTTCTAGAGAGGAGAT+GGG | - | chr5_1:54895196-54895215 | None:intergenic | 40.0% |
| ! | AGTTTGCATCACTTCTAGAG+AGG | - | chr5_1:54895203-54895222 | None:intergenic | 40.0% |
| AGTGATGCAAACTGAAGATG+AGG | + | chr5_1:54895210-54895229 | Msa0737620:intron | 40.0% | |
| CGCTTCAGCTCTATATAACA+AGG | - | chr5_1:54895260-54895279 | None:intergenic | 40.0% | |
| CTAGCAATGAAGAAAGGAGA+AGG | + | chr5_1:54895317-54895336 | Msa0737620:intron | 40.0% | |
| CTTTAACCGAGTTTGGGTAT+GGG | - | chr5_1:54895696-54895715 | None:intergenic | 40.0% | |
| ATACCCAAACTCGGTTAAAG+CGG | + | chr5_1:54895696-54895715 | Msa0737620:intron | 40.0% | |
| !! | CGAACCAAACCCATTTTAAC+GGG | - | chr5_1:54895728-54895747 | None:intergenic | 40.0% |
| ! | TAAAATGGGTTTGGTTCGAG+CGG | + | chr5_1:54895730-54895749 | Msa0737620:intron | 40.0% |
| ! | TGTTTTGTACACCACTGTCT+AGG | - | chr5_1:54895785-54895804 | None:intergenic | 40.0% |
| ! | GACGCGTGTTTAAAGTTAAG+TGG | - | chr5_1:54895849-54895868 | None:intergenic | 40.0% |
| CGTACGTAAAAAGCTTGTGT+TGG | - | chr5_1:54896079-54896098 | None:intergenic | 40.0% | |
| !!! | TAAACCACCGGCTTCTTTTT+CGG | - | chr5_1:54896286-54896305 | None:intergenic | 40.0% |
| GGATTGAAGTAACCATCCTT+CGG | - | chr5_1:54896331-54896350 | None:intergenic | 40.0% | |
| TTACTTCAATCCCCCTGATT+TGG | + | chr5_1:54896339-54896358 | Msa0737620:intron | 40.0% | |
| ! | AAAAAAAAGCGTGGTAGGTG+TGG | + | chr5_1:54896557-54896576 | Msa0737620:intron | 40.0% |
| GATATGTATGTGTTAGACCC+TGG | + | chr5_1:54896776-54896795 | Msa0737620:intron | 40.0% | |
| CTTGAGTAATACCTACACTG+AGG | + | chr5_1:54896879-54896898 | Msa0737620:intron | 40.0% | |
| AAGACACATATCCTCAGTGT+AGG | - | chr5_1:54896893-54896912 | None:intergenic | 40.0% | |
| CTTTCACCTGAACCTTAGAA+AGG | - | chr5_1:54897105-54897124 | None:intergenic | 40.0% | |
| !! | CTTTCTAAGGTTCAGGTGAA+AGG | + | chr5_1:54897103-54897122 | Msa0737620:intron | 40.0% |
| TGTTCGAATCACCAACGATA+TGG | - | chr5_1:54897545-54897564 | None:intergenic | 40.0% | |
| TCTGCAAAGAAATTGGACCA+CGG | - | chr5_1:54897572-54897591 | None:intergenic | 40.0% | |
| GTGCTTATGCTGCAATACTT+TGG | + | chr5_1:54897751-54897770 | Msa0737620:intron | 40.0% | |
| TCGTCTAAAAGCTGATCATC+AGG | + | chr5_1:54897915-54897934 | Msa0737620:CDS | 40.0% | |
| TGGCAGAGAAATTGTAGACA+TGG | + | chr5_1:54897945-54897964 | Msa0737620:CDS | 40.0% | |
| TAGACATGGCTATTGATGCT+TGG | + | chr5_1:54897959-54897978 | Msa0737620:CDS | 40.0% | |
| TTGGAACAAGTTGTCAGACA+AGG | + | chr5_1:54897978-54897997 | Msa0737620:CDS | 40.0% | |
| GCCATATGAAAAGGAAAGCA+AGG | + | chr5_1:54898115-54898134 | Msa0737620:intron | 40.0% | |
| !! | ATCCAAAAGAGCACTGAAGA+GGG | + | chr5_1:54893551-54893570 | Msa0737620:CDS | 40.0% |
| TCGTGACCTCCAAGTAAAAC+AGG | - | chr5_1:54891634-54891653 | None:intergenic | 45.0% | |
| TACTTGGAGGTCACGAAAAG+AGG | + | chr5_1:54891638-54891657 | Msa0737620:CDS | 45.0% | |
| !! | CCAGTTGCAATTTGAGTTGC+AGG | - | chr5_1:54891985-54892004 | None:intergenic | 45.0% |
| CCTGCAACTCAAATTGCAAC+TGG | + | chr5_1:54891982-54892001 | Msa0737620:CDS | 45.0% | |
| ATTGCAACTGGCAGCAATAC+AGG | + | chr5_1:54891994-54892013 | Msa0737620:CDS | 45.0% | |
| CTCTACGTAGTCAACCACAT+CGG | - | chr5_1:54892730-54892749 | None:intergenic | 45.0% | |
| TGGTTGACTACGTAGAGTCA+CGG | + | chr5_1:54892733-54892752 | Msa0737620:intron | 45.0% | |
| GGTGGCTCATATGAATTCAG+AGG | + | chr5_1:54892791-54892810 | Msa0737620:intron | 45.0% | |
| !! | GAATTCAGAGGTGCTTATGC+AGG | + | chr5_1:54892803-54892822 | Msa0737620:intron | 45.0% |
| GTTGTCAGACATGGAGAAAC+AGG | + | chr5_1:54893036-54893055 | Msa0737620:CDS | 45.0% | |
| TTCACGCTTGCCTCTTCATA+TGG | - | chr5_1:54893168-54893187 | None:intergenic | 45.0% | |
| AGAGGCAAGCGTGAAGATAA+AGG | + | chr5_1:54893173-54893192 | Msa0737620:CDS | 45.0% | |
| GATGTCCCCCATTGAAAAAC+TGG | + | chr5_1:54893368-54893387 | Msa0737620:CDS | 45.0% | |
| !! | AGAGCACTGAAGATCTTGAG+AGG | + | chr5_1:54893558-54893577 | Msa0737620:CDS | 45.0% |
| !! | GAGCACTGAAGATCTTGAGA+GGG | + | chr5_1:54893559-54893578 | Msa0737620:CDS | 45.0% |
| GAAGAGAGACCTATTGTGTG+TGG | + | chr5_1:54893584-54893603 | Msa0737620:CDS | 45.0% | |
| CGTTCGTTAGATTTGCCAAC+TGG | + | chr5_1:54893740-54893759 | Msa0737620:intron | 45.0% | |
| GACACAAAGCAGCTTAGCTA+AGG | - | chr5_1:54893967-54893986 | None:intergenic | 45.0% | |
| ! | GCTAAGCTGCTTTGTGTCTA+TGG | + | chr5_1:54893969-54893988 | Msa0737620:intron | 45.0% |
| AACCGGTAAAACTAGTAGGC+TGG | + | chr5_1:54894943-54894962 | Msa0737620:intron | 45.0% | |
| GACGAGAAAGAACCATTCTC+TGG | + | chr5_1:54895168-54895187 | Msa0737620:intron | 45.0% | |
| ! | CATCACTTCTAGAGAGGAGA+TGG | - | chr5_1:54895197-54895216 | None:intergenic | 45.0% |
| ATGAAGAAAGGAGAAGGCTC+CGG | + | chr5_1:54895323-54895342 | Msa0737620:intron | 45.0% | |
| AGAAGTTAAGAATGAGGCGG+TGG | + | chr5_1:54895439-54895458 | Msa0737620:intron | 45.0% | |
| ! | TTTCAAGACGGGTTTGGGTA+TGG | + | chr5_1:54895600-54895619 | Msa0737620:intron | 45.0% |
| ! | TTCAAGACGGGTTTGGGTAT+GGG | + | chr5_1:54895601-54895620 | Msa0737620:intron | 45.0% |
| ATGGTTACGAGACGAGTTAC+GGG | - | chr5_1:54895648-54895667 | None:intergenic | 45.0% | |
| CATGGTTACGAGACGAGTTA+CGG | - | chr5_1:54895649-54895668 | None:intergenic | 45.0% | |
| GCTTTAACCGAGTTTGGGTA+TGG | - | chr5_1:54895697-54895716 | None:intergenic | 45.0% | |
| TACCCAAACTCGGTTAAAGC+GGG | + | chr5_1:54895697-54895716 | Msa0737620:intron | 45.0% | |
| CGGGGAAAACCCGTTAAAAT+GGG | + | chr5_1:54895716-54895735 | Msa0737620:intron | 45.0% | |
| GCAACAAAACCCATACTCGT+AGG | - | chr5_1:54895759-54895778 | None:intergenic | 45.0% | |
| ! | TTTTGCAGTGTATGGGGTGT+GGG | - | chr5_1:54896024-54896043 | None:intergenic | 45.0% |
| ! | ATTTTGCAGTGTATGGGGTG+TGG | - | chr5_1:54896025-54896044 | None:intergenic | 45.0% |
| TACGTACGACTTCCTCAGAA+AGG | + | chr5_1:54896091-54896110 | Msa0737620:intron | 45.0% | |
| ACGTACGACTTCCTCAGAAA+GGG | + | chr5_1:54896092-54896111 | Msa0737620:intron | 45.0% | |
| TGGAGATTGAAGAAGGTTGC+CGG | + | chr5_1:54896206-54896225 | Msa0737620:intron | 45.0% | |
| TGAAGTAACCATCCTTCGGT+GGG | - | chr5_1:54896327-54896346 | None:intergenic | 45.0% | |
| TTGAAGTAACCATCCTTCGG+TGG | - | chr5_1:54896328-54896347 | None:intergenic | 45.0% | |
| AAAGGTGGCAAAGATATCCG+AGG | + | chr5_1:54897179-54897198 | Msa0737620:CDS | 45.0% | |
| ! | CACAACCGATCGATTCACTT+TGG | + | chr5_1:54897378-54897397 | Msa0737620:intron | 45.0% |
| TATACGCAGTCAAGCACATC+GGG | - | chr5_1:54897665-54897684 | None:intergenic | 45.0% | |
| GTATACGCAGTCAAGCACAT+CGG | - | chr5_1:54897666-54897685 | None:intergenic | 45.0% | |
| CTTGACTGCGTATACAGTCA+CGG | + | chr5_1:54897671-54897690 | Msa0737620:intron | 45.0% | |
| TTGACTGCGTATACAGTCAC+GGG | + | chr5_1:54897672-54897691 | Msa0737620:intron | 45.0% | |
| AGTAGCTCGTGTGAATTCAG+AGG | + | chr5_1:54897729-54897748 | Msa0737620:intron | 45.0% | |
| GCTGATCATCAGGACATATG+TGG | + | chr5_1:54897925-54897944 | Msa0737620:CDS | 45.0% | |
| GTTGTCAGACAAGGAGAAAC+AGG | + | chr5_1:54897987-54898006 | Msa0737620:CDS | 45.0% | |
| !! | GATCCAAAAGAGCACTGAAG+AGG | + | chr5_1:54893550-54893569 | Msa0737620:CDS | 45.0% |
| ! | ATCCCTCTTCAGTGCTCTTT+TGG | - | chr5_1:54898172-54898191 | None:intergenic | 45.0% |
| !!! | TAATTAAACTAATTTTTTTA+TGG | + | chr5_1:54891521-54891540 | Msa0737620:intron | 5.0% |
| !! | AATAAAATTATAAACTAAAA+CGG | - | chr5_1:54892043-54892062 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTAAAAAAAACA+AGG | + | chr5_1:54894730-54894749 | Msa0737620:intron | 5.0% |
| TACGATGGAAGCTCTCAGTG+AGG | - | chr5_1:54891064-54891083 | None:intergenic | 50.0% | |
| AAAGCTCAGCGAGCTTACGA+TGG | - | chr5_1:54891079-54891098 | None:intergenic | 50.0% | |
| ! | TCGTAAGCTCGCTGAGCTTT+TGG | + | chr5_1:54891079-54891098 | Msa0737620:CDS | 50.0% |
| TTGGAGGTCACGAAAAGAGG+AGG | + | chr5_1:54891641-54891660 | Msa0737620:CDS | 50.0% | |
| GGTGGTTTGAAAGAGATCCG+CGG | + | chr5_1:54892619-54892638 | Msa0737620:intron | 50.0% | |
| CTGCAAAGAAATCTGGACCG+CGG | - | chr5_1:54892639-54892658 | None:intergenic | 50.0% | |
| ATCGGTGGGTCGATCAAGAT+GGG | - | chr5_1:54892712-54892731 | None:intergenic | 50.0% | |
| ACGTAGTCAACCACATCGGT+GGG | - | chr5_1:54892726-54892745 | None:intergenic | 50.0% | |
| TACGTAGTCAACCACATCGG+TGG | - | chr5_1:54892727-54892746 | None:intergenic | 50.0% | |
| GGTTGACTACGTAGAGTCAC+GGG | + | chr5_1:54892734-54892753 | Msa0737620:intron | 50.0% | |
| !! | AGAGGTGCTTATGCAGGAGT+TGG | + | chr5_1:54892809-54892828 | Msa0737620:intron | 50.0% |
| !! | AAACGGAGAGGTGCTCCAAT+AGG | + | chr5_1:54892902-54892921 | Msa0737620:CDS | 50.0% |
| GCTTATCATCAGGACGTAGG+TGG | + | chr5_1:54892974-54892993 | Msa0737620:CDS | 50.0% | |
| TATGCACTCTTCTGTCCCCT+TGG | - | chr5_1:54893255-54893274 | None:intergenic | 50.0% | |
| GTCTAGCGCATTCATGCTTG+AGG | - | chr5_1:54893287-54893306 | None:intergenic | 50.0% | |
| ! | CTCTTTTGGCAACAACGCAC+CGG | + | chr5_1:54893646-54893665 | Msa0737620:CDS | 50.0% |
| ACCTGGGAAAAAGGGATCCT+CGG | - | chr5_1:54893705-54893724 | None:intergenic | 50.0% | |
| AACAAACAGGCCCAAAGTCG+TGG | - | chr5_1:54894569-54894588 | None:intergenic | 50.0% | |
| CTAGTAGGCTGGATACTGAC+CGG | + | chr5_1:54894954-54894973 | Msa0737620:intron | 50.0% | |
| TTTGGGTATGGGTTCAGGGT+GGG | + | chr5_1:54895612-54895631 | Msa0737620:intron | 50.0% | |
| CCGAGTTTGGGTATGGGTTT+GGG | - | chr5_1:54895690-54895709 | None:intergenic | 50.0% | |
| CCCAAACCCATACCCAAACT+CGG | + | chr5_1:54895687-54895706 | Msa0737620:intron | 50.0% | |
| ACCGAGTTTGGGTATGGGTT+TGG | - | chr5_1:54895691-54895710 | None:intergenic | 50.0% | |
| ACCCAAACTCGGTTAAAGCG+GGG | + | chr5_1:54895698-54895717 | Msa0737620:intron | 50.0% | |
| TCCCCGCTTTAACCGAGTTT+GGG | - | chr5_1:54895702-54895721 | None:intergenic | 50.0% | |
| TTCCCCGCTTTAACCGAGTT+TGG | - | chr5_1:54895703-54895722 | None:intergenic | 50.0% | |
| GCGGGGAAAACCCGTTAAAA+TGG | + | chr5_1:54895715-54895734 | Msa0737620:intron | 50.0% | |
| GAGCGGATACCTACGAGTAT+GGG | + | chr5_1:54895747-54895766 | Msa0737620:intron | 50.0% | |
| TTTGTTGCCAGCCTAGACAG+TGG | + | chr5_1:54895771-54895790 | Msa0737620:intron | 50.0% | |
| TTGTACACCACTGTCTAGGC+TGG | - | chr5_1:54895781-54895800 | None:intergenic | 50.0% | |
| TCCTCAGAAAGGGACTCAAG+TGG | + | chr5_1:54896102-54896121 | Msa0737620:intron | 50.0% | |
| !!! | AACCGCTGTGTTTTGGTGTC+CGG | - | chr5_1:54896228-54896247 | None:intergenic | 50.0% |
| CACCAAAACACAGCGGTTGT+CGG | + | chr5_1:54896230-54896249 | Msa0737620:intron | 50.0% | |
| ! | ATCCGACAACCGCTGTGTTT+TGG | - | chr5_1:54896235-54896254 | None:intergenic | 50.0% |
| GAAGTAACCATCCTTCGGTG+GGG | - | chr5_1:54896326-54896345 | None:intergenic | 50.0% | |
| GGTGATTCGAACAAGATCCG+TGG | + | chr5_1:54897552-54897571 | Msa0737620:intron | 50.0% | |
| ATACGCAGTCAAGCACATCG+GGG | - | chr5_1:54897664-54897683 | None:intergenic | 50.0% | |
| AAACGGAGACGTGCTCCAAT+AGG | + | chr5_1:54897853-54897872 | Msa0737620:CDS | 50.0% | |
| ! | GCTGAGCTTTTGGACCCTTC+TGG | + | chr5_1:54891089-54891108 | Msa0737620:CDS | 55.0% |
| GAAGGCGGCAAAGATATCCG+AGG | + | chr5_1:54892233-54892252 | Msa0737620:CDS | 55.0% | |
| GTGGGTCGATCAAGATGGGT+TGG | - | chr5_1:54892708-54892727 | None:intergenic | 55.0% | |
| CATCGGTGGGTCGATCAAGA+TGG | - | chr5_1:54892713-54892732 | None:intergenic | 55.0% | |
| TCTTGATCGACCCACCGATG+TGG | + | chr5_1:54892713-54892732 | Msa0737620:intron | 55.0% | |
| GGTGCTCCAATAGGACAGAG+TGG | + | chr5_1:54892911-54892930 | Msa0737620:CDS | 55.0% | |
| ! | TCCGAGGATCCCTTTTTCCC+AGG | + | chr5_1:54893701-54893720 | Msa0737620:CDS | 55.0% |
| GCTACTGCCTACGCATCCAA+CGG | + | chr5_1:54893821-54893840 | Msa0737620:intron | 55.0% | |
| GGGATAACCGTTGGATGCGT+AGG | - | chr5_1:54893831-54893850 | None:intergenic | 55.0% | |
| AGGAGATGGGCACCAGAGAA+TGG | - | chr5_1:54895183-54895202 | None:intergenic | 55.0% | |
| AAGAAAGGAGAAGGCTCCGG+AGG | + | chr5_1:54895326-54895345 | Msa0737620:intron | 55.0% | |
| TGAGGAGGGGGTTGAAAAGC+TGG | + | chr5_1:54895350-54895369 | Msa0737620:intron | 55.0% | |
| ACGGGTTTGGGTATGGGTTC+AGG | + | chr5_1:54895607-54895626 | Msa0737620:intron | 55.0% | |
| CGGGTTTGGGTATGGGTTCA+GGG | + | chr5_1:54895608-54895627 | Msa0737620:intron | 55.0% | |
| GTTTGGGTATGGGTTCAGGG+TGG | + | chr5_1:54895611-54895630 | Msa0737620:intron | 55.0% | |
| CGAGCGGATACCTACGAGTA+TGG | + | chr5_1:54895746-54895765 | Msa0737620:intron | 55.0% | |
| GCCACTTGAGTCCCTTTCTG+AGG | - | chr5_1:54896106-54896125 | None:intergenic | 55.0% | |
| TGCCGGACACCAAAACACAG+CGG | + | chr5_1:54896223-54896242 | Msa0737620:intron | 55.0% | |
| !!! | GGCTTCTTTTTCGGTGCCGA+GGG | - | chr5_1:54896277-54896296 | None:intergenic | 55.0% |
| ! | CTCGGCACCGAAAAAGAAGC+CGG | + | chr5_1:54896276-54896295 | Msa0737620:intron | 55.0% |
| GTCGTTCGATCAAGATGGGC+TGG | - | chr5_1:54897641-54897660 | None:intergenic | 55.0% | |
| GGGGGTCGTTCGATCAAGAT+GGG | - | chr5_1:54897645-54897664 | None:intergenic | 55.0% | |
| TACGCAGTCAAGCACATCGG+GGG | - | chr5_1:54897663-54897682 | None:intergenic | 55.0% | |
| ! | AGTCACGGGAGTGTGACTTC+TGG | + | chr5_1:54892748-54892767 | Msa0737620:intron | 55.0% |
| CGTGCTCCAATAGGTCAGAG+TGG | + | chr5_1:54897862-54897881 | Msa0737620:CDS | 55.0% | |
| GACGAGCACATTCCTGCTTG+AGG | - | chr5_1:54897900-54897919 | None:intergenic | 55.0% | |
| GTCGAGCACACTCCTGCTTG+AGG | - | chr5_1:54892949-54892968 | None:intergenic | 60.0% | |
| ! | CAACAACGCACCGGTCGACT+TGG | + | chr5_1:54893655-54893674 | Msa0737620:CDS | 60.0% |
| AGTCACTCGGGTTCCCCAGT+TGG | - | chr5_1:54893758-54893777 | None:intergenic | 60.0% | |
| AAGGCTCCGGAGGATGAGGA+GGG | + | chr5_1:54895336-54895355 | Msa0737620:intron | 60.0% | |
| TCAACCCCCTCCTCATCCTC+CGG | - | chr5_1:54895345-54895364 | None:intergenic | 60.0% | |
| TGCCGAGGGACACATAGTCG+CGG | - | chr5_1:54896263-54896282 | None:intergenic | 60.0% | |
| !!! | CGGCTTCTTTTTCGGTGCCG+AGG | - | chr5_1:54896278-54896297 | None:intergenic | 60.0% |
| ! | GGCACCGAAAAAGAAGCCGG+TGG | + | chr5_1:54896279-54896298 | Msa0737620:intron | 60.0% |
| GAAGAAGAAGGCCCCACCGA+AGG | + | chr5_1:54896312-54896331 | Msa0737620:intron | 60.0% | |
| AAGAAGGCCCCACCGAAGGA+TGG | + | chr5_1:54896316-54896335 | Msa0737620:intron | 60.0% | |
| CGGGGGTCGTTCGATCAAGA+TGG | - | chr5_1:54897646-54897665 | None:intergenic | 60.0% | |
| GGAGAAGGCTCCGGAGGATG+AGG | + | chr5_1:54895332-54895351 | Msa0737620:intron | 65.0% | |
| GAAGGCTCCGGAGGATGAGG+AGG | + | chr5_1:54895335-54895354 | Msa0737620:intron | 65.0% | |
| AGGCTCCGGAGGATGAGGAG+GGG | + | chr5_1:54895337-54895356 | Msa0737620:intron | 65.0% | |
| GAGGGACACATAGTCGCGGG+CGG | - | chr5_1:54896259-54896278 | None:intergenic | 65.0% | |
| GCCCGCGACTATGTGTCCCT+CGG | + | chr5_1:54896258-54896277 | Msa0737620:intron | 65.0% | |
| GCCGAGGGACACATAGTCGC+GGG | - | chr5_1:54896262-54896281 | None:intergenic | 65.0% | |
| GGCTCCGGAGGATGAGGAGG+GGG | + | chr5_1:54895338-54895357 | Msa0737620:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 54890948 | 54898193 | 54890948 | ID=Msa0737620;Name=Msa0737620 |
| chr5_1 | mRNA | 54890948 | 54898193 | 54890948 | ID=Msa0737620-mRNA-1;Parent=Msa0737620;Name=Msa0737620-mRNA-1;_AED=0.19;_eAED=0.23;_QI=0|0.55|0.4|1|1|1|10|0|532 |
| chr5_1 | exon | 54890948 | 54891123 | 54890948 | ID=Msa0737620-mRNA-1:exon:15477;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54891598 | 54891673 | 54891598 | ID=Msa0737620-mRNA-1:exon:15478;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54891844 | 54892015 | 54891844 | ID=Msa0737620-mRNA-1:exon:15479;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54892166 | 54892276 | 54892166 | ID=Msa0737620-mRNA-1:exon:15480;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54892849 | 54893057 | 54892849 | ID=Msa0737620-mRNA-1:exon:15481;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54893165 | 54893389 | 54893165 | ID=Msa0737620-mRNA-1:exon:15482;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54893500 | 54893722 | 54893500 | ID=Msa0737620-mRNA-1:exon:15483;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54897112 | 54897222 | 54897112 | ID=Msa0737620-mRNA-1:exon:15484;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54897791 | 54898008 | 54897791 | ID=Msa0737620-mRNA-1:exon:15485;Parent=Msa0737620-mRNA-1 |
| chr5_1 | exon | 54898116 | 54898193 | 54898116 | ID=Msa0737620-mRNA-1:exon:15486;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54890948 | 54891123 | 54890948 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54891598 | 54891673 | 54891598 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54891844 | 54892015 | 54891844 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54892166 | 54892276 | 54892166 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54892849 | 54893057 | 54892849 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54893165 | 54893389 | 54893165 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54893500 | 54893722 | 54893500 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54897112 | 54897222 | 54897112 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54897791 | 54898008 | 54897791 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| chr5_1 | CDS | 54898116 | 54898193 | 54898116 | ID=Msa0737620-mRNA-1:cds;Parent=Msa0737620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
