Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0739240 | AES99840.2 | 78.244 | 1048 | 175 | 13 | 1 | 1018 | 1 | 1025 | 0.0 | 1580 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0739240 | sp|Q9C5X9|HAC1_ARATH | 47.428 | 622 | 244 | 13 | 482 | 1026 | 1068 | 1683 | 8.65e-179 | 568 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0739240 | G7KH97 | 78.244 | 1048 | 175 | 13 | 1 | 1018 | 1 | 1025 | 0.0 | 1580 |
Gene ID | Type | Classification |
---|---|---|
Msa0739240 | TR | TAZ |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0739240 | MtrunA17_Chr5g0438991 | 78.208 | 982 | 160 | 14 | 67 | 1018 | 1 | 958 | 0.0 | 1467 |
Msa0739240 | MtrunA17_Chr6g0456861 | 82.456 | 570 | 66 | 7 | 482 | 1027 | 213 | 772 | 0.0 | 954 |
Msa0739240 | MtrunA17_Chr6g0456861 | 75.610 | 41 | 10 | 0 | 9 | 49 | 5 | 45 | 4.78e-12 | 70.5 |
Msa0739240 | MtrunA17_Chr3g0138411 | 71.451 | 641 | 109 | 7 | 464 | 1034 | 570 | 1206 | 0.0 | 919 |
Msa0739240 | MtrunA17_Chr3g0138411 | 58.772 | 114 | 34 | 2 | 1 | 101 | 1 | 114 | 6.35e-28 | 122 |
Msa0739240 | MtrunA17_Chr3g0138411 | 38.462 | 260 | 86 | 6 | 120 | 339 | 231 | 456 | 1.98e-26 | 117 |
Msa0739240 | MtrunA17_Chr3g0133461 | 71.160 | 638 | 98 | 7 | 482 | 1034 | 707 | 1343 | 0.0 | 899 |
Msa0739240 | MtrunA17_Chr3g0133461 | 47.778 | 180 | 72 | 4 | 176 | 334 | 401 | 579 | 4.40e-32 | 135 |
Msa0739240 | MtrunA17_Chr3g0133461 | 77.083 | 48 | 11 | 0 | 57 | 104 | 17 | 64 | 1.95e-12 | 72.0 |
Msa0739240 | MtrunA17_Chr4g0000031 | 47.665 | 621 | 243 | 12 | 482 | 1026 | 1081 | 1695 | 6.04e-172 | 547 |
Msa0739240 | MtrunA17_Chr6g0456851 | 70.303 | 330 | 89 | 5 | 482 | 803 | 502 | 830 | 2.37e-148 | 464 |
Msa0739240 | MtrunA17_Chr6g0456851 | 33.088 | 408 | 154 | 15 | 16 | 342 | 11 | 380 | 5.89e-34 | 140 |
Msa0739240 | MtrunA17_Chr6g0456851 | 65.672 | 67 | 23 | 0 | 848 | 914 | 807 | 873 | 2.38e-19 | 94.0 |
Msa0739240 | MtrunA17_Chr6g0456931 | 71.545 | 246 | 69 | 1 | 519 | 764 | 1 | 245 | 2.01e-122 | 374 |
Msa0739240 | MtrunA17_Chr5g0401991 | 79.130 | 230 | 35 | 4 | 749 | 974 | 1 | 221 | 6.70e-117 | 358 |
Msa0739240 | MtrunA17_Chr5g0402001 | 88.119 | 101 | 12 | 0 | 597 | 697 | 1 | 101 | 1.19e-57 | 193 |
Msa0739240 | MtrunA17_Chr5g0439001 | 76.415 | 106 | 24 | 1 | 699 | 804 | 1 | 105 | 2.04e-45 | 159 |
Msa0739240 | MtrunA17_Chr6g0456791 | 50.505 | 198 | 57 | 3 | 156 | 350 | 1 | 160 | 1.76e-37 | 138 |
Msa0739240 | MtrunA17_Chr6g0456921 | 49.682 | 157 | 19 | 5 | 597 | 752 | 1 | 98 | 4.07e-34 | 134 |
Msa0739240 | MtrunA17_Chr6g0456911 | 89.091 | 55 | 6 | 0 | 860 | 914 | 6 | 60 | 1.83e-26 | 103 |
Msa0739240 | MtrunA17_Chr0c02g0489811 | 87.719 | 57 | 7 | 0 | 858 | 914 | 5 | 61 | 3.76e-26 | 102 |
Msa0739240 | MtrunA17_Chr7g0229221 | 84.211 | 57 | 9 | 0 | 858 | 914 | 5 | 61 | 6.89e-25 | 99.0 |
Msa0739240 | MtrunA17_Chr0c02g0489731 | 80.702 | 57 | 11 | 0 | 858 | 914 | 5 | 61 | 1.53e-23 | 95.1 |
Msa0739240 | MtrunA17_Chr6g0456941 | 35.193 | 233 | 68 | 9 | 118 | 331 | 63 | 231 | 2.77e-23 | 99.8 |
Msa0739240 | MtrunA17_Chr0c02g0489721 | 85.106 | 47 | 7 | 0 | 788 | 834 | 1 | 47 | 8.24e-23 | 92.0 |
Msa0739240 | MtrunA17_Chr7g0229231 | 85.106 | 47 | 7 | 0 | 788 | 834 | 1 | 47 | 8.24e-23 | 92.0 |
Msa0739240 | MtrunA17_Chr0c02g0489821 | 86.667 | 45 | 6 | 0 | 790 | 834 | 1 | 45 | 6.90e-22 | 89.7 |
Msa0739240 | MtrunA17_Chr6g0456771 | 55.952 | 84 | 23 | 1 | 243 | 326 | 27 | 96 | 5.48e-18 | 80.1 |
Msa0739240 | MtrunA17_Chr1g0169961 | 64.516 | 62 | 22 | 0 | 277 | 338 | 54 | 115 | 4.89e-17 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0739240 | AT1G79000.3 | 47.428 | 622 | 244 | 13 | 482 | 1026 | 1044 | 1659 | 7.00e-180 | 568 |
Msa0739240 | AT1G79000.1 | 47.428 | 622 | 244 | 13 | 482 | 1026 | 1068 | 1683 | 8.80e-180 | 568 |
Msa0739240 | AT1G79000.2 | 47.428 | 622 | 244 | 13 | 482 | 1026 | 1068 | 1683 | 3.17e-179 | 568 |
Msa0739240 | AT1G16710.3 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1051 | 1666 | 1.01e-173 | 552 |
Msa0739240 | AT1G16710.10 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1051 | 1666 | 1.01e-173 | 552 |
Msa0739240 | AT1G16710.8 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1051 | 1666 | 1.01e-173 | 552 |
Msa0739240 | AT1G16710.7 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1051 | 1666 | 1.01e-173 | 552 |
Msa0739240 | AT1G16710.2 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1048 | 1663 | 1.08e-173 | 551 |
Msa0739240 | AT1G16710.6 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1012 | 1627 | 1.08e-173 | 551 |
Msa0739240 | AT1G16710.4 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1012 | 1627 | 1.08e-173 | 551 |
Msa0739240 | AT1G16710.5 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1012 | 1627 | 1.08e-173 | 551 |
Msa0739240 | AT1G16710.1 | 47.588 | 622 | 243 | 13 | 482 | 1026 | 1077 | 1692 | 3.96e-173 | 551 |
Msa0739240 | AT3G12980.2 | 46.029 | 617 | 252 | 13 | 482 | 1026 | 967 | 1574 | 1.15e-164 | 526 |
Msa0739240 | AT3G12980.1 | 46.029 | 617 | 252 | 13 | 482 | 1026 | 1048 | 1655 | 2.13e-164 | 526 |
Msa0739240 | AT1G55970.1 | 44.182 | 593 | 258 | 13 | 489 | 1023 | 850 | 1427 | 2.30e-144 | 469 |
Msa0739240 | AT1G67220.1 | 41.983 | 605 | 276 | 11 | 458 | 1002 | 746 | 1335 | 3.25e-144 | 466 |
Msa0739240 | AT1G55970.2 | 44.182 | 593 | 244 | 14 | 489 | 1023 | 850 | 1413 | 2.91e-141 | 460 |
Msa0739240 | AT1G16710.9 | 58.082 | 365 | 142 | 6 | 489 | 845 | 1058 | 1419 | 1.44e-132 | 436 |
Find 184 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACTCTTTGTCCTTCTTTC+AGG | 0.063800 | 5_1:+57404919 | None:intergenic |
GTCTTCCCGTTTCACATAAT+TGG | 0.153080 | 5_1:+57406090 | None:intergenic |
TTTCTTCCTACTACTGAAAA+AGG | 0.155283 | 5_1:-57404402 | Msa0739240:CDS |
AACAGAGAACTTATTATTAT+TGG | 0.166126 | 5_1:-57406709 | Msa0739240:CDS |
CACGAGATGGTTCCCTTAAA+AGG | 0.195973 | 5_1:-57406862 | Msa0739240:CDS |
GGAATGTATGTCCAGGAATT+TGG | 0.199160 | 5_1:-57405012 | Msa0739240:CDS |
GAAAGTAAATAAGCAGTTTC+TGG | 0.202627 | 5_1:-57405262 | Msa0739240:CDS |
TGTCGATTCCCACTGATATT+TGG | 0.203129 | 5_1:+57406827 | None:intergenic |
CACTGAATGCAAGAAGTTTC+AGG | 0.206037 | 5_1:-57403942 | Msa0739240:CDS |
AGAGTAGATTGTTTGAAAAT+AGG | 0.206122 | 5_1:-57403608 | Msa0739240:CDS |
CACTCGAATTTCACACTTAC+TGG | 0.209713 | 5_1:+57403193 | None:intergenic |
GCCTGTGCTCCTTTAGAAAA+AGG | 0.242248 | 5_1:-57404704 | Msa0739240:CDS |
CGGCGTAGCTTATCATTCTT+TGG | 0.248851 | 5_1:+57404638 | None:intergenic |
GAGTAGATTGTTTGAAAATA+GGG | 0.252944 | 5_1:-57403607 | Msa0739240:CDS |
CCAGACATCAGGAAAATTAT+TGG | 0.253501 | 5_1:+57407008 | None:intergenic |
CTTGTTAGGGGTTGTCATTT+TGG | 0.269799 | 5_1:-57407617 | Msa0739240:CDS |
AGCATCATTTATTCTATTAG+AGG | 0.271507 | 5_1:+57406477 | None:intergenic |
CGCATTCAGAGCCAAATTCC+TGG | 0.289822 | 5_1:+57405001 | None:intergenic |
AAATCGAGAGGATGCTTGTT+AGG | 0.290867 | 5_1:-57407631 | None:intergenic |
GGTTCCCTTAAAAGGCTTAC+AGG | 0.302453 | 5_1:-57406854 | Msa0739240:CDS |
TTGCATCACCAGAATGTCTT+TGG | 0.306980 | 5_1:+57404209 | None:intergenic |
CAAGCCTTCCAAAGACATTC+TGG | 0.318086 | 5_1:-57404217 | Msa0739240:CDS |
GATGCGGTTAAGCTATTTAG+AGG | 0.321374 | 5_1:-57406352 | Msa0739240:CDS |
CTAAATAGCTTAACCGCATC+AGG | 0.323312 | 5_1:+57406355 | None:intergenic |
GTTTCACAACTTGCTACATA+TGG | 0.332569 | 5_1:-57404727 | Msa0739240:CDS |
CATACTTTGATGGAGACTTC+TGG | 0.341046 | 5_1:-57404350 | Msa0739240:CDS |
TGTTTGTCCTCTACATCAAT+AGG | 0.343878 | 5_1:+57406586 | None:intergenic |
AATGTATACACAACGTTGAT+TGG | 0.347633 | 5_1:+57404972 | None:intergenic |
TCTCGTTTGCCATACTTTGA+TGG | 0.348808 | 5_1:-57404360 | Msa0739240:CDS |
CTGGCGGTATCATCCTAAAA+TGG | 0.366033 | 5_1:-57407510 | Msa0739240:CDS |
AAGTGTGTTCATCAGAACTA+TGG | 0.369353 | 5_1:+57403802 | None:intergenic |
AGTGTCAAATAGAACATTAA+AGG | 0.370702 | 5_1:-57404253 | Msa0739240:CDS |
ATGTGGACAGCAATTGAAAA+TGG | 0.372210 | 5_1:-57405703 | Msa0739240:CDS |
TCAACACCAGTATGTCAATC+TGG | 0.372617 | 5_1:-57403438 | Msa0739240:CDS |
CCACAAAAGACGGAAAATAA+TGG | 0.375984 | 5_1:-57406938 | Msa0739240:CDS |
CTTCTGTTTCAGAAAATTGA+AGG | 0.379117 | 5_1:-57405054 | Msa0739240:CDS |
GCACCAAAGTTAGCTGCCTT+TGG | 0.380260 | 5_1:+57405664 | None:intergenic |
CAAGAACATTTCCATGGAAA+TGG | 0.381561 | 5_1:-57406638 | Msa0739240:CDS |
GCCAGCATTGTAAGAAGATA+TGG | 0.385181 | 5_1:-57403160 | Msa0739240:intron |
AAGGGAACCATCTCGTGAAT+TGG | 0.391690 | 5_1:+57406868 | None:intergenic |
TTTGAGCATCTGTCCAGTCC+TGG | 0.397169 | 5_1:+57406545 | None:intergenic |
TGAGCGTGTGCAAGCTCTAT+TGG | 0.399303 | 5_1:-57407118 | Msa0739240:CDS |
GAGGACAAACAAGAAGGAAT+TGG | 0.402147 | 5_1:-57406574 | Msa0739240:CDS |
CAGAAGTCTCCATCAAAGTA+TGG | 0.405354 | 5_1:+57404351 | None:intergenic |
CAGAATGTCTTTGGAAGGCT+TGG | 0.407235 | 5_1:+57404218 | None:intergenic |
CTTATTATTATTGGTGATGA+TGG | 0.411137 | 5_1:-57406700 | Msa0739240:CDS |
TTGTCATAGAGCTAAAGTTT+TGG | 0.413031 | 5_1:-57402897 | Msa0739240:CDS |
TCTGAGAAAGGAATCTGTTC+AGG | 0.416816 | 5_1:-57406401 | Msa0739240:CDS |
TCAGTAGGGTAATTCTCCTC+TGG | 0.420217 | 5_1:+57405231 | None:intergenic |
CACTTGCCAATTATGTGAAA+CGG | 0.421087 | 5_1:-57406096 | Msa0739240:CDS |
TTCTTGATCTGAGAACAGTT+TGG | 0.428112 | 5_1:+57403230 | None:intergenic |
TCCCAGACACTATCACTTCA+TGG | 0.428163 | 5_1:+57403978 | None:intergenic |
TGATTCCCAGATTGACATAC+TGG | 0.428638 | 5_1:+57403432 | None:intergenic |
AGTATGTCAATCTGGGAATC+AGG | 0.429264 | 5_1:-57403430 | Msa0739240:CDS |
TCATGCAAGAGAGAGAAAAC+TGG | 0.430015 | 5_1:-57405582 | Msa0739240:CDS |
ATCTCAATGCCGTGCAACTA+AGG | 0.431043 | 5_1:-57403270 | Msa0739240:CDS |
TCAGGAGTCAAATGAGGAAA+TGG | 0.431304 | 5_1:-57403412 | Msa0739240:intron |
ATGTATACACAACGTTGATT+GGG | 0.434405 | 5_1:+57404973 | None:intergenic |
AAGTGTGAAATTCGAGTGAA+TGG | 0.435360 | 5_1:-57403188 | Msa0739240:CDS |
TGATGAAGTACTTGAAGAAC+CGG | 0.437567 | 5_1:-57405877 | Msa0739240:intron |
GGTGACAAAATCGCATTCAA+TGG | 0.438280 | 5_1:-57405939 | Msa0739240:CDS |
AATCGAGAGGATGCTTGTTA+GGG | 0.446744 | 5_1:-57407630 | None:intergenic |
TTACCAAAGGCAGCTAACTT+TGG | 0.452233 | 5_1:-57405667 | Msa0739240:CDS |
ATCAATAGGAACATGCATAT+CGG | 0.452882 | 5_1:+57406600 | None:intergenic |
TTCAGGCCTAAAATACTTGA+CGG | 0.457367 | 5_1:+57404936 | None:intergenic |
AAAGTTAGCTGCCTTTGGTA+AGG | 0.457759 | 5_1:+57405669 | None:intergenic |
TTCTCCAATGTCCATTTCCA+TGG | 0.464607 | 5_1:+57406627 | None:intergenic |
CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 5_1:+57403565 | None:intergenic |
CGTCGTTTACCATGAGATAC+TGG | 0.470570 | 5_1:-57404881 | Msa0739240:intron |
CGAGGTGCATACACTTTGTC+AGG | 0.471850 | 5_1:-57403769 | Msa0739240:intron |
TGCCATGAAGTGATAGTGTC+TGG | 0.473473 | 5_1:-57403980 | Msa0739240:CDS |
GGACTGGACAGATGCTCAAA+AGG | 0.473600 | 5_1:-57406542 | Msa0739240:CDS |
CACGCTCATCCAACGTCTCC+AGG | 0.474123 | 5_1:+57407133 | None:intergenic |
TGAGATATTTGCAACTATGC+TGG | 0.474134 | 5_1:-57407337 | Msa0739240:CDS |
AAGATTCATTGGCCATTGAC+TGG | 0.476711 | 5_1:+57402863 | None:intergenic |
TATAAATACAATCTGTCAGC+TGG | 0.477134 | 5_1:+57406310 | None:intergenic |
GCTGCCTTTGGTAAGGGAAA+AGG | 0.481258 | 5_1:+57405676 | None:intergenic |
ACTTGCCAATTATGTGAAAC+GGG | 0.481394 | 5_1:-57406095 | Msa0739240:CDS |
GATCATCATGGAGGAATACT+TGG | 0.481567 | 5_1:+57403527 | None:intergenic |
GAGCGTGTGCAAGCTCTATT+GGG | 0.486853 | 5_1:-57407117 | Msa0739240:CDS |
GATCTATAAGAGAATTCAGT+AGG | 0.487595 | 5_1:+57405216 | None:intergenic |
GGCAGCTAACTTTGGTGCTA+AGG | 0.497818 | 5_1:-57405659 | Msa0739240:CDS |
TTTCACAACTTGCTACATAT+GGG | 0.498062 | 5_1:-57404726 | Msa0739240:CDS |
TCACAGTAGGGTTGTGCAGA+TGG | 0.500457 | 5_1:+57403499 | None:intergenic |
TACAAAAGAAAACTTCTTCG+TGG | 0.500683 | 5_1:-57404029 | Msa0739240:CDS |
TTCTTCAGTGTTGCCATCAG+TGG | 0.503427 | 5_1:+57407035 | None:intergenic |
ACATACCTTTGAAGCAGCAT+TGG | 0.504078 | 5_1:+57407299 | None:intergenic |
ACCGAAGAAAATATTGTCGT+TGG | 0.506532 | 5_1:-57404450 | Msa0739240:CDS |
GTGACAAAATCGCATTCAAT+GGG | 0.506600 | 5_1:-57405938 | Msa0739240:CDS |
ACTTACCAATGCTGCTTCAA+AGG | 0.507990 | 5_1:-57407304 | Msa0739240:intron |
AGTGTGAAATTCGAGTGAAT+GGG | 0.509029 | 5_1:-57403187 | Msa0739240:CDS |
ACCATATCTTCTTACAATGC+TGG | 0.510556 | 5_1:+57403159 | None:intergenic |
AAGTTAGCTGCCTTTGGTAA+GGG | 0.512559 | 5_1:+57405670 | None:intergenic |
TATAGACAAGAACATTTCCA+TGG | 0.514309 | 5_1:-57406644 | Msa0739240:CDS |
TACATTCTCTCAATCTGCCT+CGG | 0.517456 | 5_1:-57407076 | Msa0739240:CDS |
CAGTAGGGTAATTCTCCTCT+GGG | 0.517758 | 5_1:+57405232 | None:intergenic |
TATTATTGATGATGATGAAG+AGG | 0.519547 | 5_1:-57406776 | Msa0739240:CDS |
CATTGATTGATTCGTTCACA+TGG | 0.521465 | 5_1:-57406450 | Msa0739240:CDS |
TTTAACACAGATTACTTCTG+AGG | 0.521977 | 5_1:-57406141 | Msa0739240:intron |
CCACAACGTAAACAATAAAG+TGG | 0.528302 | 5_1:+57406050 | None:intergenic |
CGCCAGTCCATGGAGAATCC+TGG | 0.529802 | 5_1:+57407527 | None:intergenic |
TCTATACAAGACCAGACATC+AGG | 0.532841 | 5_1:+57406997 | None:intergenic |
GAAGGCGACGGACCAGTCAA+TGG | 0.537964 | 5_1:-57402875 | Msa0739240:CDS |
CAACACCAGTATGTCAATCT+GGG | 0.540531 | 5_1:-57403437 | Msa0739240:CDS |
ATTTCCATGGAAATGGACAT+TGG | 0.541788 | 5_1:-57406631 | Msa0739240:CDS |
ACATGTTAGTAGTCTGAGAA+AGG | 0.542692 | 5_1:-57406413 | Msa0739240:CDS |
CCACTTTATTGTTTACGTTG+TGG | 0.543989 | 5_1:-57406050 | Msa0739240:CDS |
TAGGGTTGTGCAGATGGTAA+AGG | 0.549226 | 5_1:+57403505 | None:intergenic |
ATCACCAGAATGTCTTTGGA+AGG | 0.550384 | 5_1:+57404213 | None:intergenic |
GAATTGGATTCAACCAGGAC+TGG | 0.551583 | 5_1:-57406558 | Msa0739240:CDS |
ATCATTACGTTTAGTGTCGG+AGG | 0.554837 | 5_1:+57403641 | None:intergenic |
CGTAAACAATAAAGTGGGAC+TGG | 0.557014 | 5_1:+57406056 | None:intergenic |
AACCAGGATTCTCCATGGAC+TGG | 0.558239 | 5_1:-57407529 | Msa0739240:CDS |
AGACGGAAAATAATGGAGCC+TGG | 0.558553 | 5_1:-57406931 | Msa0739240:CDS |
GAAATATGTTCTCTTGATGC+GGG | 0.559456 | 5_1:+57406025 | None:intergenic |
AGAAGTTTCAGGAGTGTGAA+AGG | 0.560086 | 5_1:-57403931 | Msa0739240:intron |
GCATGTTCCTATTGATGTAG+AGG | 0.561814 | 5_1:-57406593 | Msa0739240:CDS |
ATGGTTCAGCCTTAGTTGCA+CGG | 0.562434 | 5_1:+57403261 | None:intergenic |
TCATTACGTTTAGTGTCGGA+GGG | 0.565562 | 5_1:+57403642 | None:intergenic |
CATGCAAGAGAGAGAAAACT+GGG | 0.565706 | 5_1:-57405581 | Msa0739240:CDS |
TTTGAGTCATCATCACAGTA+GGG | 0.566382 | 5_1:+57403487 | None:intergenic |
AGGATGATACCGCCAGTCCA+TGG | 0.569796 | 5_1:+57407517 | None:intergenic |
AGAAATATGTTCTCTTGATG+CGG | 0.570315 | 5_1:+57406024 | None:intergenic |
CATCAGGGTAATTGAAAACA+CGG | 0.573068 | 5_1:+57406371 | None:intergenic |
TCTACGTGTTACAAGACTAA+AGG | 0.576121 | 5_1:-57405960 | Msa0739240:CDS |
TGGTTGATATCTAACTTCTG+TGG | 0.576289 | 5_1:+57406958 | None:intergenic |
GAGAATGTAAAAGTTGACTT+CGG | 0.578439 | 5_1:+57407090 | None:intergenic |
CTTCTGGTGCAGTAATGCTA+TGG | 0.580347 | 5_1:-57404334 | Msa0739240:CDS |
ATGGTAAACGACGGTACGGA+GGG | 0.581370 | 5_1:+57404891 | None:intergenic |
AAATAGAACATTAAAGGACA+TGG | 0.581441 | 5_1:-57404247 | Msa0739240:CDS |
CCTGAAAGAAGGACAAAGAG+TGG | 0.582016 | 5_1:-57404919 | Msa0739240:CDS |
AGAACTGCATTCAACCAGAA+GGG | 0.582774 | 5_1:-57406742 | Msa0739240:CDS |
TAGATATCAACCACAAAAGA+CGG | 0.585489 | 5_1:-57406948 | Msa0739240:CDS |
GTGTGAAATTCGAGTGAATG+GGG | 0.586920 | 5_1:-57403186 | Msa0739240:CDS |
TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 5_1:-57403970 | Msa0739240:CDS |
CATGGTAAACGACGGTACGG+AGG | 0.590266 | 5_1:+57404890 | None:intergenic |
AAATCAACCAGGATTCTCCA+TGG | 0.591749 | 5_1:-57407534 | Msa0739240:CDS |
CGATCAACCAATTCACGAGA+TGG | 0.592676 | 5_1:-57406875 | Msa0739240:CDS |
CAAACGAGAAGCTGTCACCT+TGG | 0.594598 | 5_1:+57404374 | None:intergenic |
GAACAGTTTGGATGAGAGCA+TGG | 0.596297 | 5_1:+57403242 | None:intergenic |
CAGAACTGCATTCAACCAGA+AGG | 0.597524 | 5_1:-57406743 | Msa0739240:CDS |
CAGTATGCCTACTCTCGAGA+AGG | 0.599788 | 5_1:-57406806 | Msa0739240:CDS |
GATGTAGAGGACAAACAAGA+AGG | 0.602481 | 5_1:-57406580 | Msa0739240:CDS |
GATATCATTACGTTTAGTGT+CGG | 0.603752 | 5_1:+57403638 | None:intergenic |
TGGGAATCAGGAGTCAAATG+AGG | 0.603778 | 5_1:-57403418 | Msa0739240:CDS |
CAGGAATTTGGCTCTGAATG+CGG | 0.615044 | 5_1:-57405000 | Msa0739240:CDS |
GATGATGAAGAGGACATACA+AGG | 0.616251 | 5_1:-57406766 | Msa0739240:CDS |
TATTGGTGATGATGGTGAAG+AGG | 0.619524 | 5_1:-57406692 | Msa0739240:CDS |
TAAATAGCTTAACCGCATCA+GGG | 0.622361 | 5_1:+57406356 | None:intergenic |
CAGGCTAGCCAAATATCAGT+GGG | 0.625583 | 5_1:-57406835 | Msa0739240:CDS |
GCAGGAGGAATATATGAACC+TGG | 0.625899 | 5_1:-57407151 | Msa0739240:intron |
ATATATGAACCTGGAGACGT+TGG | 0.628232 | 5_1:-57407142 | Msa0739240:CDS |
GAACTGCATTCAACCAGAAG+GGG | 0.630377 | 5_1:-57406741 | Msa0739240:CDS |
AATAGAACATTAAAGGACAT+GGG | 0.630593 | 5_1:-57404246 | Msa0739240:CDS |
GATGAACACACTTCAAAGAA+CGG | 0.631803 | 5_1:-57403792 | Msa0739240:CDS |
GGACAGCAATTGAAAATGGA+CGG | 0.633089 | 5_1:-57405699 | Msa0739240:CDS |
CAGGATTCTCCATGGACTGG+CGG | 0.633302 | 5_1:-57407526 | Msa0739240:CDS |
ATCTATAAGAGAATTCAGTA+GGG | 0.634140 | 5_1:+57405217 | None:intergenic |
AAAGAAATGATCATATACGT+TGG | 0.637901 | 5_1:+57404422 | None:intergenic |
ATAACATCCTTCTCGAGAGT+AGG | 0.639951 | 5_1:+57406799 | None:intergenic |
ACAGGCTAGCCAAATATCAG+TGG | 0.640251 | 5_1:-57406836 | Msa0739240:CDS |
GTACAACAAGAAAGCAGATG+TGG | 0.640918 | 5_1:-57405720 | Msa0739240:CDS |
GCCATGAAGTGATAGTGTCT+GGG | 0.641094 | 5_1:-57403979 | Msa0739240:CDS |
TCTCATGGTAAACGACGGTA+CGG | 0.644785 | 5_1:+57404887 | None:intergenic |
ATCGAGAGGATGCTTGTTAG+GGG | 0.654312 | 5_1:-57407629 | None:intergenic |
AATGCACTAGATGTGAAAGA+TGG | 0.656431 | 5_1:-57405763 | Msa0739240:CDS |
CATTACGTTTAGTGTCGGAG+GGG | 0.657734 | 5_1:+57403643 | None:intergenic |
CACAACGTAAACAATAAAGT+GGG | 0.657953 | 5_1:+57406051 | None:intergenic |
GAGAAAGATCTTGAAAGACA+TGG | 0.665427 | 5_1:-57406670 | Msa0739240:CDS |
AGAAGGAATTGGATTCAACC+AGG | 0.668002 | 5_1:-57406563 | Msa0739240:CDS |
TGGAGGAATACTTGGCACGA+CGG | 0.668087 | 5_1:+57403535 | None:intergenic |
AGAATGATAAGCTACGCCGT+TGG | 0.671422 | 5_1:-57404634 | Msa0739240:intron |
CAGATGGTAAAGGATCATCA+TGG | 0.676590 | 5_1:+57403515 | None:intergenic |
AGGGAATGAGAAACTTGATG+AGG | 0.676669 | 5_1:-57405548 | Msa0739240:intron |
ACTAAAGAGACATCACAACC+AGG | 0.678496 | 5_1:+57406913 | None:intergenic |
AACTGCATTCAACCAGAAGG+GGG | 0.679999 | 5_1:-57406740 | Msa0739240:CDS |
GCTGAATTAAGAAATCAACC+AGG | 0.689385 | 5_1:-57407545 | Msa0739240:CDS |
ATCAGGGTAATTGAAAACAC+GGG | 0.696022 | 5_1:+57406372 | None:intergenic |
CAGTATCTCATGGTAAACGA+CGG | 0.708055 | 5_1:+57404882 | None:intergenic |
ATGGTAAAGGATCATCATGG+AGG | 0.738220 | 5_1:+57403518 | None:intergenic |
TGTGAAATTCGAGTGAATGG+GGG | 0.740491 | 5_1:-57403185 | Msa0739240:CDS |
GTTTCTGGACATCATCCCAG+AGG | 0.751856 | 5_1:-57405247 | Msa0739240:CDS |
ACACACTTCAAAGAACGGCG+AGG | 0.771728 | 5_1:-57403787 | Msa0739240:CDS |
AAATTCTGAAGTATTCACCG+AGG | 0.788052 | 5_1:+57407059 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATAAAAATAACTTAAAC+TGG | + | chr5_1:57406410-57406429 | None:intergenic | 10.0% |
!!! | TTTTTCTTCTTATTAAATGA+CGG | + | chr5_1:57403011-57403030 | None:intergenic | 15.0% |
!! | AAATTAAAGATGATAAAAGA+AGG | + | chr5_1:57405970-57405989 | None:intergenic | 15.0% |
!! | TTTATATTATTTATTTGTGC+AGG | - | chr5_1:57405991-57406010 | Msa0739240:CDS | 15.0% |
!!! | TTTTATAATTTTGATTAGGT+TGG | - | chr5_1:57406421-57406440 | Msa0739240:CDS | 15.0% |
!!! | TATTTGAACTAATTTTACAA+TGG | - | chr5_1:57406598-57406617 | Msa0739240:CDS | 15.0% |
!!! | ATTTAATTTTCACAGAAATG+TGG | - | chr5_1:57403045-57403064 | Msa0739240:intron | 20.0% |
!! | TCAACACTGAATAAAATTTA+TGG | + | chr5_1:57403119-57403138 | None:intergenic | 20.0% |
!!! | CAATTGTTTTTCTACATATT+TGG | - | chr5_1:57403315-57403334 | Msa0739240:intron | 20.0% |
!! | AACAGAGAACTTATTATTAT+TGG | - | chr5_1:57403779-57403798 | Msa0739240:CDS | 20.0% |
!! | AAGCTGAATTATATAGTAAT+GGG | + | chr5_1:57404650-57404669 | None:intergenic | 20.0% |
!!! | AAAAGCATAAATAGAAAGAA+TGG | + | chr5_1:57405695-57405714 | None:intergenic | 20.0% |
!! | CATTTACTCAAGTATAAAAA+TGG | + | chr5_1:57406361-57406380 | None:intergenic | 20.0% |
!!! | AAATTATATGAAAAAGCATC+AGG | + | chr5_1:57406757-57406776 | None:intergenic | 20.0% |
!! | ATAGAATATCAAAATTCTCT+AGG | + | chr5_1:57407441-57407460 | None:intergenic | 20.0% |
! | CTTGAATTTGATACTCTTAT+TGG | + | chr5_1:57403268-57403287 | None:intergenic | 25.0% |
! | GTGCTTAATTAACATCATAT+TGG | + | chr5_1:57403296-57403315 | None:intergenic | 25.0% |
!!! | TATTATTGATGATGATGAAG+AGG | - | chr5_1:57403712-57403731 | Msa0739240:intron | 25.0% |
!!! | CTTATTATTATTGGTGATGA+TGG | - | chr5_1:57403788-57403807 | Msa0739240:CDS | 25.0% |
! | AGCATCATTTATTCTATTAG+AGG | + | chr5_1:57404014-57404033 | None:intergenic | 25.0% |
! | TATGCATATATCTAAATTGC+AGG | + | chr5_1:57404277-57404296 | None:intergenic | 25.0% |
!!! | CCTTTTTTCAAGATTTTTCT+TGG | + | chr5_1:57404586-57404605 | None:intergenic | 25.0% |
! | CCAAGAAAAATCTTGAAAAA+AGG | - | chr5_1:57404583-57404602 | Msa0739240:intron | 25.0% |
! | CAAGCTGAATTATATAGTAA+TGG | + | chr5_1:57404651-57404670 | None:intergenic | 25.0% |
!! | GATCTTTTTCTTTACTTATG+TGG | - | chr5_1:57405120-57405139 | Msa0739240:intron | 25.0% |
! | ATCTATAAGAGAATTCAGTA+GGG | + | chr5_1:57405274-57405293 | None:intergenic | 25.0% |
!!! | TTTTTTTCCTATCATCAGAT+CGG | - | chr5_1:57405712-57405731 | Msa0739240:CDS | 25.0% |
!! | CATTTTTCTTGCAAAAATCA+AGG | + | chr5_1:57405741-57405760 | None:intergenic | 25.0% |
!! | CTTGATTTTTGCAAGAAAAA+TGG | - | chr5_1:57405739-57405758 | Msa0739240:CDS | 25.0% |
! | GTATCTTTCAATGCTAAAAA+AGG | - | chr5_1:57406013-57406032 | Msa0739240:CDS | 25.0% |
! | AAAGAAATGATCATATACGT+TGG | + | chr5_1:57406069-57406088 | None:intergenic | 25.0% |
! | AGTGTCAAATAGAACATTAA+AGG | - | chr5_1:57406235-57406254 | Msa0739240:intron | 25.0% |
! | AAATAGAACATTAAAGGACA+TGG | - | chr5_1:57406241-57406260 | Msa0739240:intron | 25.0% |
! | AATAGAACATTAAAGGACAT+GGG | - | chr5_1:57406242-57406261 | Msa0739240:intron | 25.0% |
! | AAAATGGATGTAGAACTAAA+GGG | + | chr5_1:57406345-57406364 | None:intergenic | 25.0% |
! | AAAAATGGATGTAGAACTAA+AGG | + | chr5_1:57406346-57406365 | None:intergenic | 25.0% |
!! | CTTTTGTAGGCAATATATTT+TGG | + | chr5_1:57406447-57406466 | None:intergenic | 25.0% |
!! | TAGCATTGAATGAAACAAAA+AGG | - | chr5_1:57406623-57406642 | Msa0739240:CDS | 25.0% |
!! | AGCATTGAATGAAACAAAAA+GGG | - | chr5_1:57406624-57406643 | Msa0739240:CDS | 25.0% |
! | AGAGTAGATTGTTTGAAAAT+AGG | - | chr5_1:57406880-57406899 | Msa0739240:CDS | 25.0% |
! | GAGTAGATTGTTTGAAAATA+GGG | - | chr5_1:57406881-57406900 | Msa0739240:CDS | 25.0% |
! | TGTTTTTCTACATATTTGGC+AGG | - | chr5_1:57403319-57403338 | Msa0739240:intron | 30.0% |
! | GAGAATGTAAAAGTTGACTT+CGG | + | chr5_1:57403401-57403420 | None:intergenic | 30.0% |
TAGATATCAACCACAAAAGA+CGG | - | chr5_1:57403540-57403559 | Msa0739240:CDS | 30.0% | |
TATAGACAAGAACATTTCCA+TGG | - | chr5_1:57403844-57403863 | Msa0739240:intron | 30.0% | |
ATCAATAGGAACATGCATAT+CGG | + | chr5_1:57403891-57403910 | None:intergenic | 30.0% | |
TATAAATACAATCTGTCAGC+TGG | + | chr5_1:57404181-57404200 | None:intergenic | 30.0% | |
TTTAACACAGATTACTTCTG+AGG | - | chr5_1:57404347-57404366 | Msa0739240:CDS | 30.0% | |
CACAACGTAAACAATAAAGT+GGG | + | chr5_1:57404440-57404459 | None:intergenic | 30.0% | |
AGAAATATGTTCTCTTGATG+CGG | + | chr5_1:57404467-57404486 | None:intergenic | 30.0% | |
AATGGGATCTTAAAACTTAC+CGG | + | chr5_1:57404633-57404652 | None:intergenic | 30.0% | |
AAAACTGGGAAAAAGTTGAA+GGG | - | chr5_1:57404921-57404940 | Msa0739240:CDS | 30.0% | |
CTTAAGATCAAGAAAAAGAC+AGG | + | chr5_1:57405068-57405087 | None:intergenic | 30.0% | |
! | TTTTTCTTTACTTATGTGGC+TGG | - | chr5_1:57405124-57405143 | Msa0739240:intron | 30.0% |
GAAAGTAAATAAGCAGTTTC+TGG | - | chr5_1:57405226-57405245 | Msa0739240:CDS | 30.0% | |
GATCTATAAGAGAATTCAGT+AGG | + | chr5_1:57405275-57405294 | None:intergenic | 30.0% | |
CTTCTGTTTCAGAAAATTGA+AGG | - | chr5_1:57405434-57405453 | Msa0739240:intron | 30.0% | |
! | ATGTATACACAACGTTGATT+GGG | + | chr5_1:57405518-57405537 | None:intergenic | 30.0% |
AATGTATACACAACGTTGAT+TGG | + | chr5_1:57405519-57405538 | None:intergenic | 30.0% | |
! | TTGATTCCGTCAAGTATTTT+AGG | - | chr5_1:57405546-57405565 | Msa0739240:intron | 30.0% |
AGAAAAATACCAGTATCTCA+TGG | + | chr5_1:57405619-57405638 | None:intergenic | 30.0% | |
GCATAAATAGAAAGAATGGA+AGG | + | chr5_1:57405691-57405710 | None:intergenic | 30.0% | |
!! | TTTCACAACTTGCTACATAT+GGG | - | chr5_1:57405762-57405781 | Msa0739240:CDS | 30.0% |
! | TAATCATCCCCTTTTTCTAA+AGG | + | chr5_1:57405796-57405815 | None:intergenic | 30.0% |
! | ACCAACGACAATATTTTCTT+CGG | + | chr5_1:57406042-57406061 | None:intergenic | 30.0% |
TTTCTTCCTACTACTGAAAA+AGG | - | chr5_1:57406086-57406105 | Msa0739240:CDS | 30.0% | |
TTCTTCCTACTACTGAAAAA+GGG | - | chr5_1:57406087-57406106 | Msa0739240:CDS | 30.0% | |
! | ACGAAGAAGTTTTCTTTTGT+AGG | + | chr5_1:57406460-57406479 | None:intergenic | 30.0% |
TACAAAAGAAAACTTCTTCG+TGG | - | chr5_1:57406459-57406478 | Msa0739240:CDS | 30.0% | |
!! | TATGAAAAAGCATCAGGTTT+AGG | + | chr5_1:57406751-57406770 | None:intergenic | 30.0% |
!!! | TTGAATTTTGTGCCATTTTC+AGG | - | chr5_1:57406806-57406825 | Msa0739240:CDS | 30.0% |
GATATCATTACGTTTAGTGT+CGG | + | chr5_1:57406853-57406872 | None:intergenic | 30.0% | |
!! | TTGAACAATTTTGAGTCAAC+TGG | + | chr5_1:57407034-57407053 | None:intergenic | 30.0% |
! | TTGTCATAGAGCTAAAGTTT+TGG | - | chr5_1:57407591-57407610 | Msa0739240:CDS | 30.0% |
GCTGAATTAAGAAATCAACC+AGG | - | chr5_1:57402943-57402962 | Msa0739240:CDS | 35.0% | |
! | TGACGGTTGTATACCATTTT+AGG | + | chr5_1:57402994-57403013 | None:intergenic | 35.0% |
TGAGATATTTGCAACTATGC+TGG | - | chr5_1:57403151-57403170 | Msa0739240:intron | 35.0% | |
! | TTTTCTACATATTTGGCAGG+AGG | - | chr5_1:57403322-57403341 | Msa0739240:intron | 35.0% |
!! | AAATTCTGAAGTATTCACCG+AGG | + | chr5_1:57403432-57403451 | None:intergenic | 35.0% |
! | ACTTCAGAATTTTCCACTGA+TGG | - | chr5_1:57403440-57403459 | Msa0739240:CDS | 35.0% |
CCAGACATCAGGAAAATTAT+TGG | + | chr5_1:57403483-57403502 | None:intergenic | 35.0% | |
! | CCAATAATTTTCCTGATGTC+TGG | - | chr5_1:57403480-57403499 | Msa0739240:CDS | 35.0% |
! | TGGTTGATATCTAACTTCTG+TGG | + | chr5_1:57403533-57403552 | None:intergenic | 35.0% |
! | CCATTATTTTCCGTCTTTTG+TGG | + | chr5_1:57403553-57403572 | None:intergenic | 35.0% |
CCACAAAAGACGGAAAATAA+TGG | - | chr5_1:57403550-57403569 | Msa0739240:CDS | 35.0% | |
GAGAAAGATCTTGAAAGACA+TGG | - | chr5_1:57403818-57403837 | Msa0739240:intron | 35.0% | |
CAAGAACATTTCCATGGAAA+TGG | - | chr5_1:57403850-57403869 | Msa0739240:intron | 35.0% | |
ATTTCCATGGAAATGGACAT+TGG | - | chr5_1:57403857-57403876 | Msa0739240:intron | 35.0% | |
TGTTTGTCCTCTACATCAAT+AGG | + | chr5_1:57403905-57403924 | None:intergenic | 35.0% | |
! | TGCTTCTCTTGATCAGTTTT+TGG | + | chr5_1:57403983-57404002 | None:intergenic | 35.0% |
!! | CATTGATTGATTCGTTCACA+TGG | - | chr5_1:57404038-57404057 | Msa0739240:CDS | 35.0% |
ACATGTTAGTAGTCTGAGAA+AGG | - | chr5_1:57404075-57404094 | Msa0739240:intron | 35.0% | |
ATCAGGGTAATTGAAAACAC+GGG | + | chr5_1:57404119-57404138 | None:intergenic | 35.0% | |
CATCAGGGTAATTGAAAACA+CGG | + | chr5_1:57404120-57404139 | None:intergenic | 35.0% | |
! | TGTTTTCAATTACCCTGATG+CGG | - | chr5_1:57404120-57404139 | Msa0739240:intron | 35.0% |
TAAATAGCTTAACCGCATCA+GGG | + | chr5_1:57404135-57404154 | None:intergenic | 35.0% | |
CACTTGCCAATTATGTGAAA+CGG | - | chr5_1:57404392-57404411 | Msa0739240:CDS | 35.0% | |
ACTTGCCAATTATGTGAAAC+GGG | - | chr5_1:57404393-57404412 | Msa0739240:CDS | 35.0% | |
CCACAACGTAAACAATAAAG+TGG | + | chr5_1:57404441-57404460 | None:intergenic | 35.0% | |
CCACTTTATTGTTTACGTTG+TGG | - | chr5_1:57404438-57404457 | Msa0739240:CDS | 35.0% | |
GAAATATGTTCTCTTGATGC+GGG | + | chr5_1:57404466-57404485 | None:intergenic | 35.0% | |
!! | AGAAGATGATTTTGATGCAC+AGG | - | chr5_1:57404494-57404513 | Msa0739240:intron | 35.0% |
!! | GAAGATGATTTTGATGCACA+GGG | - | chr5_1:57404495-57404514 | Msa0739240:intron | 35.0% |
TCTACGTGTTACAAGACTAA+AGG | - | chr5_1:57404528-57404547 | Msa0739240:intron | 35.0% | |
GTGACAAAATCGCATTCAAT+GGG | - | chr5_1:57404550-57404569 | Msa0739240:intron | 35.0% | |
! | TGATGAAGTACTTGAAGAAC+CGG | - | chr5_1:57404611-57404630 | Msa0739240:intron | 35.0% |
!! | ATGACTGTTGTTTCTTCTAG+TGG | - | chr5_1:57404698-57404717 | Msa0739240:CDS | 35.0% |
!! | TGACTGTTGTTTCTTCTAGT+GGG | - | chr5_1:57404699-57404718 | Msa0739240:CDS | 35.0% |
AATGCACTAGATGTGAAAGA+TGG | - | chr5_1:57404725-57404744 | Msa0739240:CDS | 35.0% | |
ATGTGGACAGCAATTGAAAA+TGG | - | chr5_1:57404785-57404804 | Msa0739240:intron | 35.0% | |
! | CGAAAAGTCTTTTCTCTAAG+TGG | + | chr5_1:57404880-57404899 | None:intergenic | 35.0% |
GAAAACTGGGAAAAAGTTGA+AGG | - | chr5_1:57404920-57404939 | Msa0739240:CDS | 35.0% | |
AAAGTCTATTTGCATGCATG+CGG | + | chr5_1:57404980-57404999 | None:intergenic | 35.0% | |
TTGAATTGCTGCAAAATTGC+AGG | - | chr5_1:57405148-57405167 | Msa0739240:intron | 35.0% | |
TAGATCAAGAGTAAGTTCGA+TGG | - | chr5_1:57405289-57405308 | Msa0739240:CDS | 35.0% | |
TCTACTCTAATATGTCTCAG+AGG | - | chr5_1:57405374-57405393 | Msa0739240:intron | 35.0% | |
GGATTTAATAGAAGTTCCCT+TGG | - | chr5_1:57405395-57405414 | Msa0739240:intron | 35.0% | |
TTAATAGAAGTTCCCTTGGT+TGG | - | chr5_1:57405399-57405418 | Msa0739240:intron | 35.0% | |
TATAACCTGAAACCAACCAA+GGG | + | chr5_1:57405414-57405433 | None:intergenic | 35.0% | |
! | GGAGTAGATGTATGCATTTT+TGG | - | chr5_1:57405455-57405474 | Msa0739240:intron | 35.0% |
!!! | CATTTTTGGAATGTATGTCC+AGG | - | chr5_1:57405469-57405488 | Msa0739240:intron | 35.0% |
TTCAGGCCTAAAATACTTGA+CGG | + | chr5_1:57405555-57405574 | None:intergenic | 35.0% | |
!! | AGTATTTTAGGCCTGAAAGA+AGG | - | chr5_1:57405558-57405577 | Msa0739240:CDS | 35.0% |
!! | GTTTCACAACTTGCTACATA+TGG | - | chr5_1:57405761-57405780 | Msa0739240:CDS | 35.0% |
!!! | TTTGGAGTTTTTTGCTCTTC+GGG | + | chr5_1:57405835-57405854 | None:intergenic | 35.0% |
!!! | CTTTGGAGTTTTTTGCTCTT+CGG | + | chr5_1:57405836-57405855 | None:intergenic | 35.0% |
AAGAAAGAAAGACTGACCAA+CGG | + | chr5_1:57405873-57405892 | None:intergenic | 35.0% | |
ACCGAAGAAAATATTGTCGT+TGG | - | chr5_1:57406038-57406057 | Msa0739240:CDS | 35.0% | |
GTAGAACTAAAGGGAAAAAG+TGG | + | chr5_1:57406336-57406355 | None:intergenic | 35.0% | |
AAGTGTGTTCATCAGAACTA+TGG | + | chr5_1:57406689-57406708 | None:intergenic | 35.0% | |
GATGAACACACTTCAAAGAA+CGG | - | chr5_1:57406696-57406715 | Msa0739240:CDS | 35.0% | |
TTTGAGTCATCATCACAGTA+GGG | + | chr5_1:57407004-57407023 | None:intergenic | 35.0% | |
!! | TTTTGAGTCATCATCACAGT+AGG | + | chr5_1:57407005-57407024 | None:intergenic | 35.0% |
TTCTTGATCTGAGAACAGTT+TGG | + | chr5_1:57407261-57407280 | None:intergenic | 35.0% | |
AAGTGTGAAATTCGAGTGAA+TGG | - | chr5_1:57407300-57407319 | Msa0739240:intron | 35.0% | |
AGTGTGAAATTCGAGTGAAT+GGG | - | chr5_1:57407301-57407320 | Msa0739240:intron | 35.0% | |
ACCATATCTTCTTACAATGC+TGG | + | chr5_1:57407332-57407351 | None:intergenic | 35.0% | |
!!! | CATAGAGCTAAAGTTTTGGA+AGG | - | chr5_1:57407595-57407614 | Msa0739240:CDS | 35.0% |
!! | CTTGTTAGGGGTTGTCATTT+TGG | - | chr5_1:57402871-57402890 | Msa0739240:CDS | 40.0% |
!!! | TTAGGGGTTGTCATTTTGGT+GGG | - | chr5_1:57402875-57402894 | Msa0739240:CDS | 40.0% |
AAATCAACCAGGATTCTCCA+TGG | - | chr5_1:57402954-57402973 | Msa0739240:intron | 40.0% | |
! | ACTTACCAATGCTGCTTCAA+AGG | - | chr5_1:57403184-57403203 | Msa0739240:CDS | 40.0% |
!! | ACATACCTTTGAAGCAGCAT+TGG | + | chr5_1:57403192-57403211 | None:intergenic | 40.0% |
ATATATGAACCTGGAGACGT+TGG | - | chr5_1:57403346-57403365 | Msa0739240:intron | 40.0% | |
TACATTCTCTCAATCTGCCT+CGG | - | chr5_1:57403412-57403431 | Msa0739240:intron | 40.0% | |
TCTATACAAGACCAGACATC+AGG | + | chr5_1:57403494-57403513 | None:intergenic | 40.0% | |
ACTAAAGAGACATCACAACC+AGG | + | chr5_1:57403578-57403597 | None:intergenic | 40.0% | |
! | CTAGCCTGTAAGCCTTTTAA+GGG | + | chr5_1:57403641-57403660 | None:intergenic | 40.0% |
!! | TGTCGATTCCCACTGATATT+TGG | + | chr5_1:57403664-57403683 | None:intergenic | 40.0% |
ATAACATCCTTCTCGAGAGT+AGG | + | chr5_1:57403692-57403711 | None:intergenic | 40.0% | |
GATGATGAAGAGGACATACA+AGG | - | chr5_1:57403722-57403741 | Msa0739240:intron | 40.0% | |
AGAACTGCATTCAACCAGAA+GGG | - | chr5_1:57403746-57403765 | Msa0739240:intron | 40.0% | |
TGTTAGTATTTACCCCCTTC+TGG | + | chr5_1:57403763-57403782 | None:intergenic | 40.0% | |
!! | TATTGGTGATGATGGTGAAG+AGG | - | chr5_1:57403796-57403815 | Msa0739240:CDS | 40.0% |
TTCTCCAATGTCCATTTCCA+TGG | + | chr5_1:57403864-57403883 | None:intergenic | 40.0% | |
GCATGTTCCTATTGATGTAG+AGG | - | chr5_1:57403895-57403914 | Msa0739240:intron | 40.0% | |
GATGTAGAGGACAAACAAGA+AGG | - | chr5_1:57403908-57403927 | Msa0739240:intron | 40.0% | |
GAGGACAAACAAGAAGGAAT+TGG | - | chr5_1:57403914-57403933 | Msa0739240:intron | 40.0% | |
AGAAGGAATTGGATTCAACC+AGG | - | chr5_1:57403925-57403944 | Msa0739240:intron | 40.0% | |
TCTGAGAAAGGAATCTGTTC+AGG | - | chr5_1:57404087-57404106 | Msa0739240:intron | 40.0% | |
CTAAATAGCTTAACCGCATC+AGG | + | chr5_1:57404136-57404155 | None:intergenic | 40.0% | |
GATGCGGTTAAGCTATTTAG+AGG | - | chr5_1:57404136-57404155 | Msa0739240:intron | 40.0% | |
GTCTTCCCGTTTCACATAAT+TGG | + | chr5_1:57404401-57404420 | None:intergenic | 40.0% | |
CGTAAACAATAAAGTGGGAC+TGG | + | chr5_1:57404435-57404454 | None:intergenic | 40.0% | |
GGTGACAAAATCGCATTCAA+TGG | - | chr5_1:57404549-57404568 | Msa0739240:intron | 40.0% | |
GTACAACAAGAAAGCAGATG+TGG | - | chr5_1:57404768-57404787 | Msa0739240:intron | 40.0% | |
GGACAGCAATTGAAAATGGA+CGG | - | chr5_1:57404789-57404808 | Msa0739240:intron | 40.0% | |
AAGTTAGCTGCCTTTGGTAA+GGG | + | chr5_1:57404821-57404840 | None:intergenic | 40.0% | |
AAAGTTAGCTGCCTTTGGTA+AGG | + | chr5_1:57404822-57404841 | None:intergenic | 40.0% | |
TTACCAAAGGCAGCTAACTT+TGG | - | chr5_1:57404821-57404840 | Msa0739240:intron | 40.0% | |
TCATGCAAGAGAGAGAAAAC+TGG | - | chr5_1:57404906-57404925 | Msa0739240:CDS | 40.0% | |
CATGCAAGAGAGAGAAAACT+GGG | - | chr5_1:57404907-57404926 | Msa0739240:CDS | 40.0% | |
AGGGAATGAGAAACTTGATG+AGG | - | chr5_1:57404940-57404959 | Msa0739240:CDS | 40.0% | |
GTATAACCTGAAACCAACCA+AGG | + | chr5_1:57405415-57405434 | None:intergenic | 40.0% | |
GGAATGTATGTCCAGGAATT+TGG | - | chr5_1:57405476-57405495 | Msa0739240:intron | 40.0% | |
CAGTATCTCATGGTAAACGA+CGG | + | chr5_1:57405609-57405628 | None:intergenic | 40.0% | |
! | AAGGTATCCGATCTGATGAT+AGG | + | chr5_1:57405722-57405741 | None:intergenic | 40.0% |
! | CCTGTGCTCCTTTAGAAAAA+GGG | - | chr5_1:57405785-57405804 | Msa0739240:intron | 40.0% |
! | CTGTGCTCCTTTAGAAAAAG+GGG | - | chr5_1:57405786-57405805 | Msa0739240:intron | 40.0% |
!!! | GAGTTCCCTTTTTCAGTAGT+AGG | + | chr5_1:57406095-57406114 | None:intergenic | 40.0% |
TACTGAAAAAGGGAACTCCA+AGG | - | chr5_1:57406097-57406116 | Msa0739240:CDS | 40.0% | |
TCTCGTTTGCCATACTTTGA+TGG | - | chr5_1:57406128-57406147 | Msa0739240:CDS | 40.0% | |
CAGAAGTCTCCATCAAAGTA+TGG | + | chr5_1:57406140-57406159 | None:intergenic | 40.0% | |
CATACTTTGATGGAGACTTC+TGG | - | chr5_1:57406138-57406157 | Msa0739240:intron | 40.0% | |
!!! | TCCTCTACTCTCTTTTTCGA+GGG | + | chr5_1:57406192-57406211 | None:intergenic | 40.0% |
!! | TTCCTCTACTCTCTTTTTCG+AGG | + | chr5_1:57406193-57406212 | None:intergenic | 40.0% |
ATCACCAGAATGTCTTTGGA+AGG | + | chr5_1:57406278-57406297 | None:intergenic | 40.0% | |
TTGCATCACCAGAATGTCTT+TGG | + | chr5_1:57406282-57406301 | None:intergenic | 40.0% | |
CACTGAATGCAAGAAGTTTC+AGG | - | chr5_1:57406546-57406565 | Msa0739240:CDS | 40.0% | |
! | AGAAGTTTCAGGAGTGTGAA+AGG | - | chr5_1:57406557-57406576 | Msa0739240:CDS | 40.0% |
CATCAACAGAAGCCTGAAAA+TGG | + | chr5_1:57406821-57406840 | None:intergenic | 40.0% | |
! | TCATTACGTTTAGTGTCGGA+GGG | + | chr5_1:57406849-57406868 | None:intergenic | 40.0% |
! | ATCATTACGTTTAGTGTCGG+AGG | + | chr5_1:57406850-57406869 | None:intergenic | 40.0% |
CAAACTGAAACTGAGACTTC+TGG | + | chr5_1:57406926-57406945 | None:intergenic | 40.0% | |
GATCATCATGGAGGAATACT+TGG | + | chr5_1:57406964-57406983 | None:intergenic | 40.0% | |
ATGGTAAAGGATCATCATGG+AGG | + | chr5_1:57406973-57406992 | None:intergenic | 40.0% | |
CAGATGGTAAAGGATCATCA+TGG | + | chr5_1:57406976-57406995 | None:intergenic | 40.0% | |
TCAACACCAGTATGTCAATC+TGG | - | chr5_1:57407050-57407069 | Msa0739240:CDS | 40.0% | |
CAACACCAGTATGTCAATCT+GGG | - | chr5_1:57407051-57407070 | Msa0739240:CDS | 40.0% | |
TGATTCCCAGATTGACATAC+TGG | + | chr5_1:57407059-57407078 | None:intergenic | 40.0% | |
AGTATGTCAATCTGGGAATC+AGG | - | chr5_1:57407058-57407077 | Msa0739240:CDS | 40.0% | |
TCAGGAGTCAAATGAGGAAA+TGG | - | chr5_1:57407076-57407095 | Msa0739240:CDS | 40.0% | |
CACTCGAATTTCACACTTAC+TGG | + | chr5_1:57407298-57407317 | None:intergenic | 40.0% | |
GTGTGAAATTCGAGTGAATG+GGG | - | chr5_1:57407302-57407321 | Msa0739240:intron | 40.0% | |
TGTGAAATTCGAGTGAATGG+GGG | - | chr5_1:57407303-57407322 | Msa0739240:intron | 40.0% | |
GCCAGCATTGTAAGAAGATA+TGG | - | chr5_1:57407328-57407347 | Msa0739240:CDS | 40.0% | |
CACTCCAGAAATTGCAAAGA+CGG | - | chr5_1:57407366-57407385 | Msa0739240:intron | 40.0% | |
CATTCCGTCTTTGCAATTTC+TGG | + | chr5_1:57407373-57407392 | None:intergenic | 40.0% | |
AATGTAGAATACCACGTTGC+AGG | - | chr5_1:57407389-57407408 | Msa0739240:intron | 40.0% | |
!!! | GTTAGGGGTTGTCATTTTGG+TGG | - | chr5_1:57402874-57402893 | Msa0739240:CDS | 45.0% |
CTGGCGGTATCATCCTAAAA+TGG | - | chr5_1:57402978-57402997 | Msa0739240:intron | 45.0% | |
GCAGGAGGAATATATGAACC+TGG | - | chr5_1:57403337-57403356 | Msa0739240:intron | 45.0% | |
TTCTTCAGTGTTGCCATCAG+TGG | + | chr5_1:57403456-57403475 | None:intergenic | 45.0% | |
! | AGACGGAAAATAATGGAGCC+TGG | - | chr5_1:57403557-57403576 | Msa0739240:CDS | 45.0% |
CGATCAACCAATTCACGAGA+TGG | - | chr5_1:57403613-57403632 | Msa0739240:CDS | 45.0% | |
AAGGGAACCATCTCGTGAAT+TGG | + | chr5_1:57403623-57403642 | None:intergenic | 45.0% | |
CACGAGATGGTTCCCTTAAA+AGG | - | chr5_1:57403626-57403645 | Msa0739240:CDS | 45.0% | |
GGTTCCCTTAAAAGGCTTAC+AGG | - | chr5_1:57403634-57403653 | Msa0739240:CDS | 45.0% | |
!! | GCTAGCCTGTAAGCCTTTTA+AGG | + | chr5_1:57403642-57403661 | None:intergenic | 45.0% |
! | ACAGGCTAGCCAAATATCAG+TGG | - | chr5_1:57403652-57403671 | Msa0739240:CDS | 45.0% |
! | CAGGCTAGCCAAATATCAGT+GGG | - | chr5_1:57403653-57403672 | Msa0739240:CDS | 45.0% |
CAGAACTGCATTCAACCAGA+AGG | - | chr5_1:57403745-57403764 | Msa0739240:intron | 45.0% | |
GAACTGCATTCAACCAGAAG+GGG | - | chr5_1:57403747-57403766 | Msa0739240:intron | 45.0% | |
AACTGCATTCAACCAGAAGG+GGG | - | chr5_1:57403748-57403767 | Msa0739240:intron | 45.0% | |
GAATTGGATTCAACCAGGAC+TGG | - | chr5_1:57403930-57403949 | Msa0739240:intron | 45.0% | |
TTGCATGCATGCGGATTTCT+TGG | + | chr5_1:57404971-57404990 | None:intergenic | 45.0% | |
CAGTAGGGTAATTCTCCTCT+GGG | + | chr5_1:57405259-57405278 | None:intergenic | 45.0% | |
TCAGTAGGGTAATTCTCCTC+TGG | + | chr5_1:57405260-57405279 | None:intergenic | 45.0% | |
!! | AAGTTCCCTTGGTTGGTTTC+AGG | - | chr5_1:57405406-57405425 | Msa0739240:intron | 45.0% |
!! | CAGGAATTTGGCTCTGAATG+CGG | - | chr5_1:57405488-57405507 | Msa0739240:intron | 45.0% |
CCACTCTTTGTCCTTCTTTC+AGG | + | chr5_1:57405572-57405591 | None:intergenic | 45.0% | |
CCTGAAAGAAGGACAAAGAG+TGG | - | chr5_1:57405569-57405588 | Msa0739240:CDS | 45.0% | |
TCTCATGGTAAACGACGGTA+CGG | + | chr5_1:57405604-57405623 | None:intergenic | 45.0% | |
CGTCGTTTACCATGAGATAC+TGG | - | chr5_1:57405607-57405626 | Msa0739240:CDS | 45.0% | |
! | GCCTGTGCTCCTTTAGAAAA+AGG | - | chr5_1:57405784-57405803 | Msa0739240:intron | 45.0% |
!! | CCCTTTTTCTAAAGGAGCAC+AGG | + | chr5_1:57405788-57405807 | None:intergenic | 45.0% |
!!! | GAGTTTTTTGCTCTTCGGGA+TGG | + | chr5_1:57405831-57405850 | None:intergenic | 45.0% |
CGGCGTAGCTTATCATTCTT+TGG | + | chr5_1:57405853-57405872 | None:intergenic | 45.0% | |
AGAATGATAAGCTACGCCGT+TGG | - | chr5_1:57405854-57405873 | Msa0739240:intron | 45.0% | |
CTTCTGGTGCAGTAATGCTA+TGG | - | chr5_1:57406154-57406173 | Msa0739240:intron | 45.0% | |
!!! | ACTCTCTTTTTCGAGGGTCT+TGG | + | chr5_1:57406186-57406205 | None:intergenic | 45.0% |
ACCCTCGAAAAAGAGAGTAG+AGG | - | chr5_1:57406188-57406207 | Msa0739240:intron | 45.0% | |
! | CAGAATGTCTTTGGAAGGCT+TGG | + | chr5_1:57406273-57406292 | None:intergenic | 45.0% |
CAAGCCTTCCAAAGACATTC+TGG | - | chr5_1:57406271-57406290 | Msa0739240:intron | 45.0% | |
! | TGCCATGAAGTGATAGTGTC+TGG | - | chr5_1:57406508-57406527 | Msa0739240:CDS | 45.0% |
! | GCCATGAAGTGATAGTGTCT+GGG | - | chr5_1:57406509-57406528 | Msa0739240:CDS | 45.0% |
TCCCAGACACTATCACTTCA+TGG | + | chr5_1:57406513-57406532 | None:intergenic | 45.0% | |
! | CATTACGTTTAGTGTCGGAG+GGG | + | chr5_1:57406848-57406867 | None:intergenic | 45.0% |
TAGGGTTGTGCAGATGGTAA+AGG | + | chr5_1:57406986-57407005 | None:intergenic | 45.0% | |
TGGGAATCAGGAGTCAAATG+AGG | - | chr5_1:57407070-57407089 | Msa0739240:CDS | 45.0% | |
ATCTCAATGCCGTGCAACTA+AGG | - | chr5_1:57407218-57407237 | Msa0739240:intron | 45.0% | |
ATGGTTCAGCCTTAGTTGCA+CGG | + | chr5_1:57407230-57407249 | None:intergenic | 45.0% | |
GAACAGTTTGGATGAGAGCA+TGG | + | chr5_1:57407249-57407268 | None:intergenic | 45.0% | |
!!! | GCTAAAGTTTTGGAAGGCGA+CGG | - | chr5_1:57407601-57407620 | Msa0739240:CDS | 45.0% |
!!! | TTATTTTTATAATTTTGATT+AGG | - | chr5_1:57406417-57406436 | Msa0739240:CDS | 5.0% |
AACCAGGATTCTCCATGGAC+TGG | - | chr5_1:57402959-57402978 | Msa0739240:intron | 50.0% | |
TGAGCGTGTGCAAGCTCTAT+TGG | - | chr5_1:57403370-57403389 | Msa0739240:intron | 50.0% | |
GAGCGTGTGCAAGCTCTATT+GGG | - | chr5_1:57403371-57403390 | Msa0739240:intron | 50.0% | |
CAGTATGCCTACTCTCGAGA+AGG | - | chr5_1:57403682-57403701 | Msa0739240:intron | 50.0% | |
TTTGAGCATCTGTCCAGTCC+TGG | + | chr5_1:57403946-57403965 | None:intergenic | 50.0% | |
GGACTGGACAGATGCTCAAA+AGG | - | chr5_1:57403946-57403965 | Msa0739240:CDS | 50.0% | |
! | ACGGCCTTTTCCCTTACCAA+AGG | - | chr5_1:57404808-57404827 | Msa0739240:intron | 50.0% |
GCTGCCTTTGGTAAGGGAAA+AGG | + | chr5_1:57404815-57404834 | None:intergenic | 50.0% | |
GCACCAAAGTTAGCTGCCTT+TGG | + | chr5_1:57404827-57404846 | None:intergenic | 50.0% | |
!! | GGCAGCTAACTTTGGTGCTA+AGG | - | chr5_1:57404829-57404848 | Msa0739240:intron | 50.0% |
! | GTTTCTGGACATCATCCCAG+AGG | - | chr5_1:57405241-57405260 | Msa0739240:CDS | 50.0% |
CGCATTCAGAGCCAAATTCC+TGG | + | chr5_1:57405490-57405509 | None:intergenic | 50.0% | |
ATGGTAAACGACGGTACGGA+GGG | + | chr5_1:57405600-57405619 | None:intergenic | 50.0% | |
CAAACGAGAAGCTGTCACCT+TGG | + | chr5_1:57406117-57406136 | None:intergenic | 50.0% | |
! | TGATAGTGTCTGGGAAGCGA+TGG | - | chr5_1:57406518-57406537 | Msa0739240:CDS | 50.0% |
ACACACTTCAAAGAACGGCG+AGG | - | chr5_1:57406701-57406720 | Msa0739240:CDS | 50.0% | |
CGAGGTGCATACACTTTGTC+AGG | - | chr5_1:57406719-57406738 | Msa0739240:CDS | 50.0% | |
TGGAGGAATACTTGGCACGA+CGG | + | chr5_1:57406956-57406975 | None:intergenic | 50.0% | |
TCACAGTAGGGTTGTGCAGA+TGG | + | chr5_1:57406992-57407011 | None:intergenic | 50.0% | |
ATTGCAACACACCTGCAACG+TGG | + | chr5_1:57407403-57407422 | None:intergenic | 50.0% | |
!! | CAGGATTCTCCATGGACTGG+CGG | - | chr5_1:57402962-57402981 | Msa0739240:intron | 55.0% |
AGGATGATACCGCCAGTCCA+TGG | + | chr5_1:57402974-57402993 | None:intergenic | 55.0% | |
CATGGTAAACGACGGTACGG+AGG | + | chr5_1:57405601-57405620 | None:intergenic | 55.0% | |
CGCCAGTCCATGGAGAATCC+TGG | + | chr5_1:57402964-57402983 | None:intergenic | 60.0% | |
CACGCTCATCCAACGTCTCC+AGG | + | chr5_1:57403358-57403377 | None:intergenic | 60.0% | |
GAAGGCGACGGACCAGTCAA+TGG | - | chr5_1:57407613-57407632 | Msa0739240:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 57402868 | 57407642 | 57402868 | ID=Msa0739240;Name=Msa0739240 |
chr5_1 | mRNA | 57402868 | 57407642 | 57402868 | ID=Msa0739240-mRNA-1;Parent=Msa0739240;Name=Msa0739240-mRNA-1;_AED=0.19;_eAED=0.25;_QI=0|0.30|0.21|1|1|1|14|0|1034 |
chr5_1 | exon | 57407479 | 57407642 | 57407479 | ID=Msa0739240-mRNA-1:exon:16328;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57407305 | 57407377 | 57407305 | ID=Msa0739240-mRNA-1:exon:16327;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57406319 | 57407169 | 57406319 | ID=Msa0739240-mRNA-1:exon:16326;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57405878 | 57406153 | 57405878 | ID=Msa0739240-mRNA-1:exon:16325;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57405549 | 57405792 | 57405549 | ID=Msa0739240-mRNA-1:exon:16324;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57405212 | 57405340 | 57405212 | ID=Msa0739240-mRNA-1:exon:16323;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57404882 | 57405082 | 57404882 | ID=Msa0739240-mRNA-1:exon:16322;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57404635 | 57404780 | 57404635 | ID=Msa0739240-mRNA-1:exon:16321;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57404206 | 57404497 | 57404206 | ID=Msa0739240-mRNA-1:exon:16320;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57403932 | 57404071 | 57403932 | ID=Msa0739240-mRNA-1:exon:16319;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57403770 | 57403827 | 57403770 | ID=Msa0739240-mRNA-1:exon:16318;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57403413 | 57403682 | 57403413 | ID=Msa0739240-mRNA-1:exon:16317;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57403161 | 57403324 | 57403161 | ID=Msa0739240-mRNA-1:exon:16316;Parent=Msa0739240-mRNA-1 |
chr5_1 | exon | 57402868 | 57402964 | 57402868 | ID=Msa0739240-mRNA-1:exon:16315;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57407479 | 57407642 | 57407479 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57407305 | 57407377 | 57407305 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57406319 | 57407169 | 57406319 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57405878 | 57406153 | 57405878 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57405549 | 57405792 | 57405549 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57405212 | 57405340 | 57405212 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57404882 | 57405082 | 57404882 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57404635 | 57404780 | 57404635 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57404206 | 57404497 | 57404206 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57403932 | 57404071 | 57403932 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57403770 | 57403827 | 57403770 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57403413 | 57403682 | 57403413 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57403161 | 57403324 | 57403161 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
chr5_1 | CDS | 57402868 | 57402964 | 57402868 | ID=Msa0739240-mRNA-1:cds;Parent=Msa0739240-mRNA-1 |
Gene Sequence |
Protein sequence |