Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739880 | XP_003617013.1 | 100.000 | 103 | 0 | 0 | 496 | 598 | 568 | 670 | 3.76e-62 | 228 |
| Msa0739880 | XP_003617013.1 | 89.924 | 526 | 31 | 5 | 7 | 529 | 1 | 507 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739880 | sp|Q39238|TSL_ARATH | 60.772 | 492 | 167 | 9 | 7 | 475 | 1 | 489 | 0.0 | 551 |
| Msa0739880 | sp|Q39238|TSL_ARATH | 82.692 | 104 | 17 | 1 | 496 | 598 | 585 | 688 | 1.79e-54 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739880 | G7KHC0 | 100.000 | 103 | 0 | 0 | 496 | 598 | 568 | 670 | 1.80e-62 | 228 |
| Msa0739880 | G7KHC0 | 89.924 | 526 | 31 | 5 | 7 | 529 | 1 | 507 | 0.0 | 934 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739880 | MtrunA17_Chr5g0440001 | 89.924 | 526 | 31 | 5 | 7 | 529 | 1 | 507 | 0.0 | 934 |
| Msa0739880 | MtrunA17_Chr5g0440001 | 100.000 | 103 | 0 | 0 | 496 | 598 | 568 | 670 | 3.46e-66 | 228 |
| Msa0739880 | MtrunA17_Chr5g0440131 | 91.351 | 370 | 8 | 3 | 130 | 475 | 8 | 377 | 0.0 | 662 |
| Msa0739880 | MtrunA17_Chr5g0440131 | 99.029 | 103 | 1 | 0 | 496 | 598 | 473 | 575 | 5.57e-66 | 226 |
| Msa0739880 | MtrunA17_Chr5g0440171 | 75.108 | 462 | 94 | 7 | 83 | 526 | 9 | 467 | 0.0 | 614 |
| Msa0739880 | MtrunA17_Chr5g0440171 | 92.233 | 103 | 8 | 0 | 496 | 598 | 502 | 604 | 8.74e-60 | 209 |
| Msa0739880 | MtrunA17_Chr5g0440051 | 76.238 | 202 | 21 | 2 | 277 | 475 | 3 | 180 | 3.06e-100 | 309 |
| Msa0739880 | MtrunA17_Chr5g0440051 | 77.778 | 72 | 16 | 0 | 496 | 567 | 276 | 347 | 1.39e-30 | 123 |
| Msa0739880 | MtrunA17_Chr5g0440181 | 88.462 | 156 | 15 | 1 | 323 | 475 | 4 | 159 | 3.69e-92 | 288 |
| Msa0739880 | MtrunA17_Chr5g0440181 | 79.167 | 72 | 15 | 0 | 496 | 567 | 255 | 326 | 2.36e-31 | 125 |
| Msa0739880 | MtrunA17_Chr3g0093631 | 88.298 | 94 | 8 | 1 | 385 | 475 | 2 | 95 | 3.80e-54 | 183 |
| Msa0739880 | MtrunA17_Chr5g0440021 | 97.222 | 72 | 2 | 0 | 496 | 567 | 199 | 270 | 2.03e-42 | 154 |
| Msa0739880 | MtrunA17_Chr5g0440021 | 55.102 | 147 | 9 | 2 | 329 | 475 | 14 | 103 | 1.34e-40 | 149 |
| Msa0739880 | MtrunA17_Chr5g0440041 | 93.056 | 72 | 5 | 0 | 496 | 567 | 110 | 181 | 2.94e-41 | 147 |
| Msa0739880 | MtrunA17_Chr0c14g0493691 | 94.030 | 67 | 4 | 0 | 237 | 303 | 1 | 67 | 1.05e-34 | 125 |
| Msa0739880 | MtrunA17_Chr3g0093641 | 97.619 | 42 | 1 | 0 | 526 | 567 | 1 | 42 | 1.00e-22 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739880 | AT5G20930.1 | 60.772 | 492 | 167 | 9 | 7 | 475 | 1 | 489 | 0.0 | 551 |
| Msa0739880 | AT5G20930.1 | 82.692 | 104 | 17 | 1 | 496 | 598 | 585 | 688 | 1.82e-55 | 199 |
| Msa0739880 | AT2G25880.1 | 28.814 | 177 | 93 | 7 | 432 | 594 | 120 | 277 | 9.06e-11 | 63.5 |
Find 158 sgRNAs with CRISPR-Local
Find 577 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACCCACGTAAAGAAAATT+AGG | 0.156813 | 5_1:-58458985 | None:intergenic |
| GAAGATTGATTTGATTAAAT+TGG | 0.172266 | 5_1:-58458745 | None:intergenic |
| TATTCTTGCCACCAAATTAT+TGG | 0.174724 | 5_1:+58467791 | Msa0739880:three_prime_UTR |
| TACGCCCTTCTAAACCTTCT+TGG | 0.225091 | 5_1:+58465177 | Msa0739880:CDS |
| TGTATTATAATCCAATAATT+TGG | 0.225560 | 5_1:-58467802 | None:intergenic |
| AGAACAGTGCAGAATGTATT+TGG | 0.250791 | 5_1:-58465575 | None:intergenic |
| TGGCCTTCGGTTTCTTCTGC+TGG | 0.260268 | 5_1:+58459337 | Msa0739880:CDS |
| TTCTTCATGCATTTATCATT+TGG | 0.264930 | 5_1:+58467666 | Msa0739880:three_prime_UTR |
| ATCGTCATATTGTTCGTTTA+TGG | 0.293409 | 5_1:+58465534 | Msa0739880:CDS |
| TCGTCATATTGTTCGTTTAT+GGG | 0.296471 | 5_1:+58465535 | Msa0739880:CDS |
| GTGAAGGAAAGTGAAAATTT+TGG | 0.298507 | 5_1:-58458874 | None:intergenic |
| TCGTGAAGACACAATTATTA+AGG | 0.329793 | 5_1:+58466704 | Msa0739880:CDS |
| AAATTTGCCAGGAATTTATA+CGG | 0.332181 | 5_1:+58467385 | Msa0739880:intron |
| AATTTCTTCTTCAACAGTTT+CGG | 0.333500 | 5_1:+58462121 | Msa0739880:CDS |
| CCTTTCCAAGAAGGTTTAGA+AGG | 0.336937 | 5_1:-58465182 | None:intergenic |
| TTACATAAGGCATGCAATTC+GGG | 0.338859 | 5_1:+58465484 | Msa0739880:CDS |
| GGAAGATGGTCAGGCGTTAA+AGG | 0.346557 | 5_1:+58463762 | Msa0739880:CDS |
| ATTCGTGATCAGAGAGAAAA+AGG | 0.347016 | 5_1:-58459022 | None:intergenic |
| TATGTTGCATGCAAGCTTCA+TGG | 0.347747 | 5_1:+58465425 | Msa0739880:CDS |
| AAGATTGATTTGATTAAATT+GGG | 0.348058 | 5_1:-58458744 | None:intergenic |
| GTTTCTTCTGCTGGGAAATT+CGG | 0.353138 | 5_1:+58459346 | Msa0739880:CDS |
| GAAGTATTCTCTCTTGTGTT+TGG | 0.362711 | 5_1:-58466683 | None:intergenic |
| TTGCTGAGCTCAAAGCATTC+AGG | 0.362890 | 5_1:-58466377 | None:intergenic |
| GATCCGTTTCGTAATGATAA+TGG | 0.365983 | 5_1:+58462302 | Msa0739880:CDS |
| CTCGACTAGCCAGCATTAAA+CGG | 0.372614 | 5_1:+58464959 | Msa0739880:CDS |
| TCTGGTCTGATCATTAGATT+TGG | 0.372885 | 5_1:-58462093 | None:intergenic |
| TTCTTCACGTATGTGAGATA+TGG | 0.375947 | 5_1:-58467465 | None:intergenic |
| TGAAGAAGAAATTTGTGTTC+TGG | 0.375982 | 5_1:-58462111 | None:intergenic |
| GTTACATAAGGCATGCAATT+CGG | 0.378982 | 5_1:+58465483 | Msa0739880:CDS |
| CGTATGTGAGATATGGATCT+TGG | 0.381433 | 5_1:-58467458 | None:intergenic |
| AGATGCAGAGGCTGGATTGC+TGG | 0.381890 | 5_1:+58464903 | Msa0739880:CDS |
| TGAAGGAAGACAAACTAGTT+TGG | 0.387629 | 5_1:+58461989 | Msa0739880:CDS |
| CTCTTCGGCAGACGTCCTTT+CGG | 0.387682 | 5_1:+58466654 | Msa0739880:CDS |
| GCCTCCTTCTCAGGCAATAT+AGG | 0.392408 | 5_1:-58466006 | None:intergenic |
| AAGAAATCTGGTCGTGGAAG+AGG | 0.396651 | 5_1:+58462041 | Msa0739880:CDS |
| TCGTGAAATGAAACGCATTC+GGG | 0.403820 | 5_1:+58465107 | Msa0739880:CDS |
| TCGGAAATGTTGGTGTAATC+AGG | 0.407160 | 5_1:+58463631 | Msa0739880:CDS |
| GGCCTTCGGTTTCTTCTGCT+GGG | 0.412278 | 5_1:+58459338 | Msa0739880:CDS |
| TATCATTTGGTTCAAAATAC+CGG | 0.415656 | 5_1:+58467679 | Msa0739880:three_prime_UTR |
| TGAGTTGACTTGACCTTGAA+AGG | 0.427520 | 5_1:+58467719 | Msa0739880:three_prime_UTR |
| ATACATCATTGACCCTTTCA+AGG | 0.430542 | 5_1:-58467732 | None:intergenic |
| GACCCACGTAAAGAAAATTA+GGG | 0.435878 | 5_1:-58458984 | None:intergenic |
| CACCATTCGAGCTTCCAACT+TGG | 0.445681 | 5_1:-58459278 | None:intergenic |
| TCCAACTTGGCAATCTTTGT+AGG | 0.446175 | 5_1:-58459265 | None:intergenic |
| CAGGTTGATGTCTGGTCTGC+TGG | 0.447095 | 5_1:+58466612 | Msa0739880:intron |
| TTCGTGAAATGAAACGCATT+CGG | 0.447560 | 5_1:+58465106 | Msa0739880:CDS |
| TGAAAGGGTCAATGATGTAT+AGG | 0.450282 | 5_1:+58467735 | Msa0739880:three_prime_UTR |
| GCCTACAAAGATTGCCAAGT+TGG | 0.452437 | 5_1:+58459264 | Msa0739880:CDS |
| TTAGAAACAGTAGGTCTTGA+GGG | 0.452648 | 5_1:-58466744 | None:intergenic |
| TGAATCCTCCCTTTCCAAGA+AGG | 0.462463 | 5_1:-58465191 | None:intergenic |
| TCAGCAACAAGGTTGGCCTT+CGG | 0.463098 | 5_1:+58459324 | Msa0739880:CDS |
| TCAACAGTTTCGGCTTCAAA+TGG | 0.466296 | 5_1:+58462131 | Msa0739880:CDS |
| GAAGCAAATAGAAAGAAATC+TGG | 0.469408 | 5_1:+58462029 | Msa0739880:CDS |
| GGTCGTGGAAGAGGGAGTTC+TGG | 0.470919 | 5_1:+58462050 | Msa0739880:CDS |
| AGAAGAAGCAAAGTTACATA+AGG | 0.471355 | 5_1:+58465471 | Msa0739880:CDS |
| TGGGCAATGGTCAATACATC+TGG | 0.473043 | 5_1:-58467438 | None:intergenic |
| ATGACTCTAGCCTCCTTCTC+AGG | 0.476923 | 5_1:-58466015 | None:intergenic |
| TGAGACCTGGGAAGATGGTC+AGG | 0.479728 | 5_1:+58463753 | Msa0739880:CDS |
| ATATCTGTCAGAATTTGTAT+AGG | 0.482828 | 5_1:+58467574 | Msa0739880:three_prime_UTR |
| TGAAACTGATATCAGCAAAT+CGG | 0.484786 | 5_1:-58463556 | None:intergenic |
| TGATAATGGTGCTTCATTAG+AGG | 0.489391 | 5_1:+58462316 | Msa0739880:CDS |
| TGGAGTAGCAGCTGAAGAAA+TGG | 0.489926 | 5_1:+58459369 | Msa0739880:CDS |
| CTTCTAAACCTTCTTGGAAA+GGG | 0.490597 | 5_1:+58465183 | Msa0739880:CDS |
| TCGACTAGCCAGCATTAAAC+GGG | 0.492390 | 5_1:+58464960 | Msa0739880:CDS |
| CTAGGGTTTGTTAAGAGTGG+TGG | 0.493497 | 5_1:-58458786 | None:intergenic |
| AGACTAGGGTTTGTTAAGAG+TGG | 0.498618 | 5_1:-58458789 | None:intergenic |
| GCAACTTACCCGTTTAATGC+TGG | 0.500123 | 5_1:-58464968 | None:intergenic |
| GTGGAAAACAGGTTGATGTC+TGG | 0.502498 | 5_1:+58466604 | Msa0739880:intron |
| GTCGAATTCTTCGAACCAAT+CGG | 0.503177 | 5_1:+58459231 | Msa0739880:CDS |
| TTCATGGTTTAAATGCTCAA+TGG | 0.506027 | 5_1:+58465441 | Msa0739880:CDS |
| AGCAAGACTAAAAGTACGAC+AGG | 0.513451 | 5_1:+58463596 | Msa0739880:CDS |
| GTATGTGAGATATGGATCTT+GGG | 0.514827 | 5_1:-58467457 | None:intergenic |
| TTAACTGAGACCTGGGAAGA+TGG | 0.516049 | 5_1:+58463748 | Msa0739880:CDS |
| ATACATCTGGTCTCTCAGCC+TGG | 0.518193 | 5_1:-58467425 | None:intergenic |
| CTAAACCTTCTTGGAAAGGG+AGG | 0.518567 | 5_1:+58465186 | Msa0739880:CDS |
| AGAATTTGTATAGGCTGTTG+AGG | 0.525378 | 5_1:+58467583 | Msa0739880:three_prime_UTR |
| TTTGCTGATATCAGTTTCAA+AGG | 0.526129 | 5_1:+58463560 | Msa0739880:CDS |
| AGTGGTGGAATCAAAAGCTT+GGG | 0.526784 | 5_1:-58458771 | None:intergenic |
| ATTATAATCCAATAATTTGG+TGG | 0.527729 | 5_1:-58467799 | None:intergenic |
| TGAGGAGCAAATGAAACCTA+AGG | 0.527993 | 5_1:+58463245 | Msa0739880:CDS |
| GAAGCTCGAATGGTGGGAAA+AGG | 0.529220 | 5_1:+58459286 | Msa0739880:CDS |
| GAGTTGACTTGACCTTGAAA+GGG | 0.530733 | 5_1:+58467720 | Msa0739880:three_prime_UTR |
| TCTGGTTCAAGCAGAGGTCG+TGG | 0.532569 | 5_1:+58462068 | Msa0739880:CDS |
| ATCTCAAATGAGTGAGGGAA+AGG | 0.533258 | 5_1:+58467613 | Msa0739880:three_prime_UTR |
| GAAGGAATTGAAAGATCTTG+AGG | 0.533969 | 5_1:+58463227 | Msa0739880:CDS |
| CACAATTATTAAGGCACGCA+AGG | 0.535508 | 5_1:+58466713 | Msa0739880:CDS |
| TACTGTTTCTAATGAGGCAA+AGG | 0.536433 | 5_1:+58466755 | Msa0739880:CDS |
| AATCAGTTGAAGAAATGAAA+GGG | 0.540220 | 5_1:-58458928 | None:intergenic |
| GATGGGATAGATGCAGAGGC+TGG | 0.540764 | 5_1:+58464895 | Msa0739880:CDS |
| CCTTCTAAACCTTCTTGGAA+AGG | 0.541495 | 5_1:+58465182 | Msa0739880:CDS |
| TATCTGTCCACAGTTAGAAA+AGG | 0.541834 | 5_1:+58462634 | Msa0739880:CDS |
| ATGCCTGAAGATAAGGGTGA+TGG | 0.542659 | 5_1:+58464877 | Msa0739880:intron |
| TTCGGGATGAAGATGGTTCA+CGG | 0.544469 | 5_1:+58465124 | Msa0739880:CDS |
| ATGACCTTGGATGATATAAG+AGG | 0.545308 | 5_1:-58466404 | None:intergenic |
| TTGGCACATGTAGGAACTGA+AGG | 0.546431 | 5_1:+58463209 | Msa0739880:intron |
| ACCTATATTGCCTGAGAAGG+AGG | 0.546736 | 5_1:+58466005 | Msa0739880:CDS |
| TGAAGCATCATTGCAAAACA+AGG | 0.548529 | 5_1:-58458709 | None:intergenic |
| TGCAAAAGTTGTTGTGTTGG+AGG | 0.549250 | 5_1:+58462568 | Msa0739880:CDS |
| TCTTCTGCTGGGAAATTCGG+TGG | 0.551139 | 5_1:+58459349 | Msa0739880:CDS |
| AGAGGTTAGACATACAAGTT+GGG | 0.554680 | 5_1:-58463794 | None:intergenic |
| CTTTCCAAGAAGGTTTAGAA+GGG | 0.555578 | 5_1:-58465181 | None:intergenic |
| AACTGTCTTAACTGAGACCT+GGG | 0.558445 | 5_1:+58463741 | Msa0739880:CDS |
| GAATCAGTTGAAGAAATGAA+AGG | 0.559765 | 5_1:-58458929 | None:intergenic |
| TGCCAAGTTGGAAGCTCGAA+TGG | 0.559835 | 5_1:+58459276 | Msa0739880:CDS |
| GGACCGCTACGAACTAGAGA+AGG | 0.561150 | 5_1:+58465074 | Msa0739880:CDS |
| TTCTTATCTCAAATGAGTGA+GGG | 0.561259 | 5_1:+58467608 | Msa0739880:three_prime_UTR |
| AAACGCATTCGGGATGAAGA+TGG | 0.562115 | 5_1:+58465117 | Msa0739880:CDS |
| TCATTGAGACTCGGAAATGT+TGG | 0.563510 | 5_1:+58463621 | Msa0739880:CDS |
| GAGTGGTGGAATCAAAAGCT+TGG | 0.566808 | 5_1:-58458772 | None:intergenic |
| AGAAATCTGGTCGTGGAAGA+GGG | 0.567691 | 5_1:+58462042 | Msa0739880:CDS |
| AAGACCTACTGTTTCTAATG+AGG | 0.569301 | 5_1:+58466749 | Msa0739880:CDS |
| TAACGCCTGACCATCTTCCC+AGG | 0.569356 | 5_1:-58463758 | None:intergenic |
| ATTAGAAACAGTAGGTCTTG+AGG | 0.569928 | 5_1:-58466745 | None:intergenic |
| AGTAGTGATGTTCATTGACA+TGG | 0.571545 | 5_1:+58467487 | Msa0739880:exon |
| TTTCTTATCTCAAATGAGTG+AGG | 0.571754 | 5_1:+58467607 | Msa0739880:three_prime_UTR |
| GAACTGTCTTAACTGAGACC+TGG | 0.573288 | 5_1:+58463740 | Msa0739880:CDS |
| GGGAGTTCTGGTTCAAGCAG+AGG | 0.577053 | 5_1:+58462062 | Msa0739880:CDS |
| GCAAAACAAGGAAGTAGTAG+AGG | 0.579067 | 5_1:-58458697 | None:intergenic |
| CTATATCAGGTTGTTACTGA+AGG | 0.582887 | 5_1:+58461972 | Msa0739880:intron |
| AACACCTATATTGCCTGAGA+AGG | 0.583381 | 5_1:+58466002 | Msa0739880:CDS |
| GCACCATTATCATTACGAAA+CGG | 0.585310 | 5_1:-58462305 | None:intergenic |
| CTGCTTCTCAGCAACAAGGT+TGG | 0.586766 | 5_1:+58459317 | Msa0739880:CDS |
| TCAACTGCTTCTCAGCAACA+AGG | 0.590574 | 5_1:+58459313 | Msa0739880:CDS |
| TGCCTGAAGATAAGGGTGAT+GGG | 0.592768 | 5_1:+58464878 | Msa0739880:intron |
| AATAGAAAGAAATCTGGTCG+TGG | 0.596379 | 5_1:+58462035 | Msa0739880:CDS |
| GACGCCTCTTATATCATCCA+AGG | 0.602777 | 5_1:+58466400 | Msa0739880:CDS |
| CGACAGGACTCATTGAGACT+CGG | 0.604297 | 5_1:+58463612 | Msa0739880:CDS |
| TAGGCAGAGACTGATCCGAT+TGG | 0.604815 | 5_1:-58459246 | None:intergenic |
| GGTTTAGAAGGGCGTAACGA+TGG | 0.606514 | 5_1:-58465170 | None:intergenic |
| ACGTGCAAAAGTTGTTGTGT+TGG | 0.607960 | 5_1:+58462565 | Msa0739880:CDS |
| AACAATATGACGATGGACCA+AGG | 0.608478 | 5_1:-58465525 | None:intergenic |
| GAAACAACTACTCGAAACAA+AGG | 0.609976 | 5_1:+58464417 | Msa0739880:intron |
| AAGTTGGAAGCTCGAATGGT+GGG | 0.614592 | 5_1:+58459280 | Msa0739880:CDS |
| ACATGATCGTTATCATCGTG+AGG | 0.615437 | 5_1:-58461696 | None:intergenic |
| TGTGTTTGGTCATGTCCGAA+AGG | 0.620138 | 5_1:-58466669 | None:intergenic |
| GTATAATATTCACAAGACCT+TGG | 0.620892 | 5_1:+58465508 | Msa0739880:CDS |
| CTTTCTATTCCAGAATGGTG+CGG | 0.623023 | 5_1:+58461635 | Msa0739880:intron |
| CAAGTTGGAAGCTCGAATGG+TGG | 0.626529 | 5_1:+58459279 | Msa0739880:CDS |
| TCAGAATCACTTGAACTGCA+AGG | 0.632922 | 5_1:-58459397 | None:intergenic |
| TGGGTGTGTTGATGTTGTGA+AGG | 0.634472 | 5_1:-58458890 | None:intergenic |
| GGTGGAATCAAAAGCTTGGG+AGG | 0.638583 | 5_1:-58458768 | None:intergenic |
| GGGTGATGGGATAGATGCAG+AGG | 0.641412 | 5_1:+58464891 | Msa0739880:CDS |
| TTCCCTTCTCTAGTTCGTAG+CGG | 0.644251 | 5_1:-58465077 | None:intergenic |
| CTGAGCTCAAAGCATTCAGG+AGG | 0.645161 | 5_1:-58466374 | None:intergenic |
| GACCGCTACGAACTAGAGAA+GGG | 0.647954 | 5_1:+58465075 | Msa0739880:CDS |
| TTTGCCTCATTAGAAACAGT+AGG | 0.648415 | 5_1:-58466753 | None:intergenic |
| GTGGAATCAAAAGCTTGGGA+GGG | 0.652802 | 5_1:-58458767 | None:intergenic |
| AGTTACAGAAGCAACAATGT+CGG | 0.664253 | 5_1:+58459186 | Msa0739880:intron |
| GCGGTGTCTAACATATAACC+AGG | 0.666800 | 5_1:+58467407 | Msa0739880:CDS |
| TTCCCAGCAGAAGAAACCGA+AGG | 0.672759 | 5_1:-58459340 | None:intergenic |
| ATAAACGAACAATATGACGA+TGG | 0.680530 | 5_1:-58465532 | None:intergenic |
| ACAACTACTCGAAACAAAGG+AGG | 0.687624 | 5_1:+58464420 | Msa0739880:CDS |
| ACAGATATTCTGATGCTGAG+AGG | 0.691242 | 5_1:-58462618 | None:intergenic |
| GAGATATGGATCTTGGGCAA+TGG | 0.691935 | 5_1:-58467451 | None:intergenic |
| GGAAGATATTCTCATTCACG+AGG | 0.697452 | 5_1:+58464924 | Msa0739880:CDS |
| CAAATGAAAAGAAAATGCAG+CGG | 0.717428 | 5_1:-58467832 | None:intergenic |
| TTTGCCAGGAATTTATACGG+CGG | 0.759334 | 5_1:+58467388 | Msa0739880:intron |
| TGGAAAGGGAGGATTCAGCG+AGG | 0.790703 | 5_1:+58465197 | Msa0739880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAATATTATAAAA+AGG | - | chr5_1:58463682-58463701 | None:intergenic | 0.0% |
| !!! | TTTTTATAATATTTTTATTT+AGG | + | chr5_1:58463681-58463700 | Msa0739880:intron | 0.0% |
| !! | TCTTTAATGAAAAAAAAAAT+GGG | - | chr5_1:58459073-58459092 | None:intergenic | 10.0% |
| !! | TTCTTTAATGAAAAAAAAAA+TGG | - | chr5_1:58459074-58459093 | None:intergenic | 10.0% |
| !!! | TGATTATTTCTTTTTAATTT+AGG | + | chr5_1:58459767-58459786 | Msa0739880:intron | 10.0% |
| !!! | AATTATTTTCTTTCATTTAT+AGG | - | chr5_1:58462780-58462799 | None:intergenic | 10.0% |
| !!! | TTATTTAAAATATAATGAAG+TGG | + | chr5_1:58463350-58463369 | Msa0739880:intron | 10.0% |
| !! | ATTCAATAAATAAATATGAA+GGG | - | chr5_1:58463826-58463845 | None:intergenic | 10.0% |
| !! | AATTCAATAAATAAATATGA+AGG | - | chr5_1:58463827-58463846 | None:intergenic | 10.0% |
| !! | TATTTATAAAAAGTAAGTAT+AGG | - | chr5_1:58467330-58467349 | None:intergenic | 10.0% |
| !!! | AAGATTGATTTGATTAAATT+GGG | - | chr5_1:58458747-58458766 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTAATTTAGGATA+CGG | + | chr5_1:58459773-58459792 | Msa0739880:intron | 15.0% |
| !!! | ATTGTAATTTTGAAAATGTA+AGG | - | chr5_1:58460002-58460021 | None:intergenic | 15.0% |
| !!! | CTAGATATTTTATTTTTTGA+AGG | + | chr5_1:58460198-58460217 | Msa0739880:intron | 15.0% |
| !! | ATAAAGTAAAAAAAAATGAC+AGG | - | chr5_1:58460390-58460409 | None:intergenic | 15.0% |
| !! | ATTGTAATTATGAAAATTCA+AGG | - | chr5_1:58461244-58461263 | None:intergenic | 15.0% |
| !! | TATATGATTAGAATTATGAT+AGG | + | chr5_1:58462412-58462431 | Msa0739880:intron | 15.0% |
| !! | TTTCATCTTTGTATTAAATT+AGG | + | chr5_1:58462526-58462545 | Msa0739880:intron | 15.0% |
| !!! | TTATTGTCATTTTTTAGTTT+GGG | - | chr5_1:58462906-58462925 | None:intergenic | 15.0% |
| !!! | ATTATTGTCATTTTTTAGTT+TGG | - | chr5_1:58462907-58462926 | None:intergenic | 15.0% |
| !! | AAATTGTAAATACGTATTAA+AGG | + | chr5_1:58463118-58463137 | Msa0739880:intron | 15.0% |
| !!! | TAAATTCTAATGTTTGATTT+TGG | + | chr5_1:58463190-58463209 | Msa0739880:intron | 15.0% |
| !!! | TTTTATTTAGGTTTTCTTAT+TGG | + | chr5_1:58463693-58463712 | Msa0739880:intron | 15.0% |
| !! | ACAATTTCTTCATAATATAT+TGG | + | chr5_1:58463903-58463922 | Msa0739880:intron | 15.0% |
| !! | CAATTTCTTCATAATATATT+GGG | + | chr5_1:58463904-58463923 | Msa0739880:intron | 15.0% |
| !!! | GATGAATAAATACAATTTTA+AGG | + | chr5_1:58464210-58464229 | Msa0739880:intron | 15.0% |
| !! | ATTATAACTAACATATATCT+TGG | + | chr5_1:58464624-58464643 | Msa0739880:intron | 15.0% |
| !! | TAAAAAAAAATTAATGACCT+TGG | - | chr5_1:58466420-58466439 | None:intergenic | 15.0% |
| !! | TAATATAAATAAATGAACGA+TGG | - | chr5_1:58466832-58466851 | None:intergenic | 15.0% |
| !! | TATATTATTCTATTATTCAG+TGG | + | chr5_1:58466845-58466864 | Msa0739880:intron | 15.0% |
| !! | TGTATTATAATCCAATAATT+TGG | - | chr5_1:58467805-58467824 | None:intergenic | 15.0% |
| !!! | GAAGATTGATTTGATTAAAT+TGG | - | chr5_1:58458748-58458767 | None:intergenic | 20.0% |
| !!! | TTTTGTGGAATTTATGAAAT+GGG | - | chr5_1:58458964-58458983 | None:intergenic | 20.0% |
| !!! | AGAAACGATTTTTTCTTATA+AGG | + | chr5_1:58459090-58459109 | Msa0739880:intron | 20.0% |
| !!! | GAAACGATTTTTTCTTATAA+GGG | + | chr5_1:58459091-58459110 | Msa0739880:intron | 20.0% |
| !! | CAAATAAGCAACAAATATAA+CGG | - | chr5_1:58459493-58459512 | None:intergenic | 20.0% |
| !! | ACTAACGAAATATATATTTG+GGG | - | chr5_1:58459636-58459655 | None:intergenic | 20.0% |
| !! | GACTAACGAAATATATATTT+GGG | - | chr5_1:58459637-58459656 | None:intergenic | 20.0% |
| !! | TGACTAACGAAATATATATT+TGG | - | chr5_1:58459638-58459657 | None:intergenic | 20.0% |
| !!! | TAATTTTGAAAATGTAAGGA+GGG | - | chr5_1:58459998-58460017 | None:intergenic | 20.0% |
| !! | TTTATTGCTCAAATGAAAAA+TGG | + | chr5_1:58460267-58460286 | Msa0739880:intron | 20.0% |
| !! | AGGATATATTCTGTATATAA+TGG | - | chr5_1:58460370-58460389 | None:intergenic | 20.0% |
| !! | CATCTAACGAAATATATATT+TGG | - | chr5_1:58460799-58460818 | None:intergenic | 20.0% |
| !! | CAAATATATATTTCGTTAGA+TGG | + | chr5_1:58460797-58460816 | Msa0739880:intron | 20.0% |
| !! | TTATAAATTTGATACAGTCA+AGG | + | chr5_1:58461379-58461398 | Msa0739880:intron | 20.0% |
| !!! | TATTTTTGTGTTTTCATTGT+TGG | + | chr5_1:58461510-58461529 | Msa0739880:intron | 20.0% |
| !!! | GTATTTTATTGTTGATTATC+TGG | + | chr5_1:58461544-58461563 | Msa0739880:intron | 20.0% |
| !! | GATTATCTGGAAAATATAAA+TGG | + | chr5_1:58461557-58461576 | Msa0739880:intron | 20.0% |
| !! | AGAAAGAAATATGAAGATAA+GGG | - | chr5_1:58461621-58461640 | None:intergenic | 20.0% |
| !! | TAGAAAGAAATATGAAGATA+AGG | - | chr5_1:58461622-58461641 | None:intergenic | 20.0% |
| !!! | TCTTTGAGCAATAAATTTTA+TGG | + | chr5_1:58462203-58462222 | Msa0739880:intron | 20.0% |
| !! | CATTAATAATGAATCATACA+CGG | + | chr5_1:58462846-58462865 | Msa0739880:intron | 20.0% |
| !! | CTATAAATTCAATTAGCAAA+TGG | - | chr5_1:58463069-58463088 | None:intergenic | 20.0% |
| !! | ATTAAAGGTAATAGAATTGA+CGG | + | chr5_1:58463133-58463152 | Msa0739880:intron | 20.0% |
| !!! | TTATTTTCATCTTTTGATTG+TGG | + | chr5_1:58463273-58463292 | Msa0739880:intron | 20.0% |
| !! | TAAATAACATGTATACCAAT+AGG | - | chr5_1:58463337-58463356 | None:intergenic | 20.0% |
| !!! | TTTAAAATATAATGAAGTGG+TGG | + | chr5_1:58463353-58463372 | Msa0739880:intron | 20.0% |
| !!! | ATGAACTAGAAATTTTAAAG+AGG | + | chr5_1:58463414-58463433 | Msa0739880:intron | 20.0% |
| !! | GTATAAAAATTAAGTTAAGC+CGG | + | chr5_1:58463486-58463505 | Msa0739880:intron | 20.0% |
| !!! | TATTATATGAATTTTAGAGC+TGG | + | chr5_1:58463718-58463737 | Msa0739880:intron | 20.0% |
| !!! | AGTGTTTAACTATTTTGAAT+AGG | - | chr5_1:58463945-58463964 | None:intergenic | 20.0% |
| !!! | TATATTTACGTGTTTCATTT+TGG | + | chr5_1:58464106-58464125 | Msa0739880:intron | 20.0% |
| !! | ATTCTAAATATCATCAAACA+AGG | + | chr5_1:58464165-58464184 | Msa0739880:intron | 20.0% |
| !! | TTCTAAATATCATCAAACAA+GGG | + | chr5_1:58464166-58464185 | Msa0739880:intron | 20.0% |
| !! | TTATTCAAGAAAAAACAATC+TGG | + | chr5_1:58464463-58464482 | Msa0739880:CDS | 20.0% |
| !! | ATGTTAGTTATAATGACAAT+TGG | - | chr5_1:58464618-58464637 | None:intergenic | 20.0% |
| !! | TATAAATAAGTAAATAGTGG+AGG | - | chr5_1:58464702-58464721 | None:intergenic | 20.0% |
| !! | TCGTATAAATAAGTAAATAG+TGG | - | chr5_1:58464705-58464724 | None:intergenic | 20.0% |
| !! | ATACAATAAATATCTGTTTC+AGG | + | chr5_1:58464768-58464787 | Msa0739880:intron | 20.0% |
| !! | AATTTAGCGAATATTATACA+AGG | + | chr5_1:58465275-58465294 | Msa0739880:intron | 20.0% |
| !! | TATTTACATTTGCCAATAAA+AGG | - | chr5_1:58465339-58465358 | None:intergenic | 20.0% |
| !!! | CTCTTTTATTCATGTAAATA+AGG | - | chr5_1:58466062-58466081 | None:intergenic | 20.0% |
| !!! | CAAACCATTAACATTTTAAT+GGG | - | chr5_1:58466994-58467013 | None:intergenic | 20.0% |
| !!! | TCAAACCATTAACATTTTAA+TGG | - | chr5_1:58466995-58467014 | None:intergenic | 20.0% |
| !! | TAAAATGTTAATGGTTTGAT+AGG | + | chr5_1:58466996-58467015 | Msa0739880:intron | 20.0% |
| !! | GAACCATAATAATATTTCTT+AGG | + | chr5_1:58467115-58467134 | Msa0739880:intron | 20.0% |
| !! | ATGCCTAAGAAATATTATTA+TGG | - | chr5_1:58467121-58467140 | None:intergenic | 20.0% |
| !!! | TGCAGAATTATAATTTTGAT+TGG | - | chr5_1:58467254-58467273 | None:intergenic | 20.0% |
| !!! | AAAAGTAAGTATAGGTATTT+TGG | - | chr5_1:58467322-58467341 | None:intergenic | 20.0% |
| !! | ATTATAATCCAATAATTTGG+TGG | - | chr5_1:58467802-58467821 | None:intergenic | 20.0% |
| !! | TGAAGGAAAGTGAAAATTTT+GGG | - | chr5_1:58458876-58458895 | None:intergenic | 25.0% |
| ! | AATCAGTTGAAGAAATGAAA+GGG | - | chr5_1:58458931-58458950 | None:intergenic | 25.0% |
| !! | GTTTTGTGGAATTTATGAAA+TGG | - | chr5_1:58458965-58458984 | None:intergenic | 25.0% |
| !! | TAAAGAAAATTAGGGTTTTG+TGG | - | chr5_1:58458979-58458998 | None:intergenic | 25.0% |
| !!! | GAAAAAAAAAATGGGTTTTG+AGG | - | chr5_1:58459065-58459084 | None:intergenic | 25.0% |
| !! | TATAAGGGTTGAATTTTATG+AGG | + | chr5_1:58459106-58459125 | Msa0739880:intron | 25.0% |
| ! | TTATGAGGTTATTGTGATTA+TGG | + | chr5_1:58459121-58459140 | Msa0739880:intron | 25.0% |
| ! | TTGCTTATTTGATAAATGAC+AGG | + | chr5_1:58459502-58459521 | Msa0739880:intron | 25.0% |
| ! | TTATCGAGTATATAGTTATC+TGG | + | chr5_1:58459549-58459568 | Msa0739880:intron | 25.0% |
| ! | TATCGAGTATATAGTTATCT+GGG | + | chr5_1:58459550-58459569 | Msa0739880:intron | 25.0% |
| !! | ACTTTTGATACATTCAAAGA+CGG | - | chr5_1:58459604-58459623 | None:intergenic | 25.0% |
| !!! | TAAATGCTGATTTGTTTTGT+TGG | + | chr5_1:58459909-58459928 | Msa0739880:intron | 25.0% |
| !!! | GTAATTTTGAAAATGTAAGG+AGG | - | chr5_1:58459999-58460018 | None:intergenic | 25.0% |
| !! | CTGTATATAATGGAAAAATG+TGG | - | chr5_1:58460360-58460379 | None:intergenic | 25.0% |
| !! | AAAAAAATTGTTCTGGGTTA+GGG | - | chr5_1:58460548-58460567 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGTTCT+GGG | - | chr5_1:58460554-58460573 | None:intergenic | 25.0% |
| ! | AAAAGGGAAAAAAATTGTTC+TGG | - | chr5_1:58460555-58460574 | None:intergenic | 25.0% |
| ! | CTCATTTATTTGTAGTGATA+GGG | + | chr5_1:58460623-58460642 | Msa0739880:intron | 25.0% |
| !! | ATTCTGATTGTGGAAATTTT+TGG | + | chr5_1:58460653-58460672 | Msa0739880:intron | 25.0% |
| !!! | GTGTTGTTTGTTAATAAGTT+AGG | + | chr5_1:58460834-58460853 | Msa0739880:intron | 25.0% |
| !!! | TTTTGTTTGTTTCGTTTTGT+TGG | + | chr5_1:58461152-58461171 | Msa0739880:intron | 25.0% |
| ! | CCATAAACAGATAAATAATG+AGG | - | chr5_1:58461465-58461484 | None:intergenic | 25.0% |
| ! | CCTCATTATTTATCTGTTTA+TGG | + | chr5_1:58461462-58461481 | Msa0739880:intron | 25.0% |
| !!! | TTTGATATTTTAAACGCATG+CGG | + | chr5_1:58461487-58461506 | Msa0739880:intron | 25.0% |
| ! | TATTTCTTTCTATTCCAGAA+TGG | + | chr5_1:58461630-58461649 | Msa0739880:intron | 25.0% |
| ! | AAAATACTAGTAACAGAAGA+TGG | - | chr5_1:58461870-58461889 | None:intergenic | 25.0% |
| ! | TATAGTGATAGTTATTCAGT+TGG | - | chr5_1:58461957-58461976 | None:intergenic | 25.0% |
| ! | TGAATAACTATCACTATATC+AGG | + | chr5_1:58461959-58461978 | Msa0739880:intron | 25.0% |
| ! | AATTTCTTCTTCAACAGTTT+CGG | + | chr5_1:58462121-58462140 | Msa0739880:CDS | 25.0% |
| ! | CAAAGAACCAAATATTTGAT+GGG | - | chr5_1:58462189-58462208 | None:intergenic | 25.0% |
| ! | TCAAAGAACCAAATATTTGA+TGG | - | chr5_1:58462190-58462209 | None:intergenic | 25.0% |
| ! | CATCTTTGTATTAAATTAGG+AGG | + | chr5_1:58462529-58462548 | Msa0739880:intron | 25.0% |
| !! | TTATATACCTTTTCTAACTG+TGG | - | chr5_1:58462644-58462663 | None:intergenic | 25.0% |
| ! | AGTTCCAATGAGTAAAATTT+GGG | - | chr5_1:58462818-58462837 | None:intergenic | 25.0% |
| ! | AAGTTCCAATGAGTAAAATT+TGG | - | chr5_1:58462819-58462838 | None:intergenic | 25.0% |
| ! | GATGAAAATAATCAAACCTT+AGG | - | chr5_1:58463264-58463283 | None:intergenic | 25.0% |
| ! | TCTTACTCCAAAATAAGTTA+AGG | + | chr5_1:58463446-58463465 | Msa0739880:intron | 25.0% |
| ! | TTTGTTCTCTACAAAATTCA+AGG | - | chr5_1:58463528-58463547 | None:intergenic | 25.0% |
| ! | ATCATACTTAGAAATACCAT+TGG | - | chr5_1:58463859-58463878 | None:intergenic | 25.0% |
| !!! | TTTTGGTAACAATGGTTTTA+TGG | + | chr5_1:58464123-58464142 | Msa0739880:intron | 25.0% |
| !!! | TTTGGTAACAATGGTTTTAT+GGG | + | chr5_1:58464124-58464143 | Msa0739880:intron | 25.0% |
| ! | TCAATTCAACAAAAGCAAAA+AGG | - | chr5_1:58464192-58464211 | None:intergenic | 25.0% |
| !! | TTTTCCTTTTCAGTACTATT+AGG | + | chr5_1:58464257-58464276 | Msa0739880:intron | 25.0% |
| !!! | ATGTTTCTATAACTTTTCTG+TGG | + | chr5_1:58464305-58464324 | Msa0739880:intron | 25.0% |
| ! | AAACAAATTACATAGTGTTC+TGG | - | chr5_1:58464661-58464680 | None:intergenic | 25.0% |
| !!! | GGTTTGAATTTTGTTTTTCT+TGG | + | chr5_1:58464845-58464864 | Msa0739880:intron | 25.0% |
| ! | TAAAGAGGAAATAGAATAAG+CGG | - | chr5_1:58465001-58465020 | None:intergenic | 25.0% |
| ! | TTATCTTCATAAAACAGATG+AGG | - | chr5_1:58465624-58465643 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTCAGATTTTCCA+AGG | + | chr5_1:58466036-58466055 | Msa0739880:intron | 25.0% |
| !! | AAGTTTAAAACCAACAAGTT+TGG | - | chr5_1:58466289-58466308 | None:intergenic | 25.0% |
| ! | GCAAATCAAAAATGAAAGAA+AGG | - | chr5_1:58466345-58466364 | None:intergenic | 25.0% |
| !!! | TTCTTTCATTTTTGATTTGC+AGG | + | chr5_1:58466345-58466364 | Msa0739880:intron | 25.0% |
| !!! | TTGTTTTATCAAATGCTCTT+CGG | + | chr5_1:58466639-58466658 | Msa0739880:CDS | 25.0% |
| ! | GCAATAATATAACCTAAAAC+AGG | - | chr5_1:58466883-58466902 | None:intergenic | 25.0% |
| ! | AATGCCCATTAAAATGTTAA+TGG | + | chr5_1:58466987-58467006 | Msa0739880:intron | 25.0% |
| !!! | AAGTATAGGTATTTTGGATT+TGG | - | chr5_1:58467316-58467335 | None:intergenic | 25.0% |
| ! | AAATTTGCCAGGAATTTATA+CGG | + | chr5_1:58467385-58467404 | Msa0739880:intron | 25.0% |
| ! | ATATCTGTCAGAATTTGTAT+AGG | + | chr5_1:58467574-58467593 | Msa0739880:three_prime_UTR | 25.0% |
| ! | TTCTTCATGCATTTATCATT+TGG | + | chr5_1:58467666-58467685 | Msa0739880:three_prime_UTR | 25.0% |
| !! | TATCATTTGGTTCAAAATAC+CGG | + | chr5_1:58467679-58467698 | Msa0739880:three_prime_UTR | 25.0% |
| ! | GTGAAGGAAAGTGAAAATTT+TGG | - | chr5_1:58458877-58458896 | None:intergenic | 30.0% |
| AGGGTCAAAAAATTTACGAT+GGG | - | chr5_1:58458912-58458931 | None:intergenic | 30.0% | |
| AAGGGTCAAAAAATTTACGA+TGG | - | chr5_1:58458913-58458932 | None:intergenic | 30.0% | |
| GAATCAGTTGAAGAAATGAA+AGG | - | chr5_1:58458932-58458951 | None:intergenic | 30.0% | |
| ! | AAACCCTAATTTTCTTTACG+TGG | + | chr5_1:58458981-58459000 | Msa0739880:five_prime_UTR | 30.0% |
| ! | AACCCTAATTTTCTTTACGT+GGG | + | chr5_1:58458982-58459001 | Msa0739880:five_prime_UTR | 30.0% |
| AAACTCATCTTGCAGATAAA+AGG | - | chr5_1:58459443-58459462 | None:intergenic | 30.0% | |
| ATTTGATAAATGACAGGTTG+TGG | + | chr5_1:58459508-58459527 | Msa0739880:intron | 30.0% | |
| !! | AGTGTTTTTGTTAGTCAGTT+AGG | + | chr5_1:58459672-58459691 | Msa0739880:intron | 30.0% |
| CTTATTTGCTTGTAGTGATT+TGG | + | chr5_1:58459882-58459901 | Msa0739880:intron | 30.0% | |
| TTATCGAGTAAATAGCCATT+TGG | + | chr5_1:58459944-58459963 | Msa0739880:intron | 30.0% | |
| TATCGAGTAAATAGCCATTT+GGG | + | chr5_1:58459945-58459964 | Msa0739880:intron | 30.0% | |
| CCTAACGAAAGATATATTTG+GGG | - | chr5_1:58460036-58460055 | None:intergenic | 30.0% | |
| GCCTAACGAAAGATATATTT+GGG | - | chr5_1:58460037-58460056 | None:intergenic | 30.0% | |
| CAAATATATCTTTCGTTAGG+CGG | + | chr5_1:58460036-58460055 | Msa0739880:intron | 30.0% | |
| ! | GTGTCTTTTGTTAGTAAGTT+AGG | + | chr5_1:58460073-58460092 | Msa0739880:intron | 30.0% |
| ! | ACGTGAAATTTTTGAACTCT+AGG | + | chr5_1:58460164-58460183 | Msa0739880:intron | 30.0% |
| ! | ACCCCATCTAAAACTAAAAT+CGG | + | chr5_1:58460290-58460309 | Msa0739880:intron | 30.0% |
| !!! | ACCCGATTTTAGTTTTAGAT+GGG | - | chr5_1:58460295-58460314 | None:intergenic | 30.0% |
| ! | TCAAGTTCTAACTCTTCAAA+TGG | + | chr5_1:58460314-58460333 | Msa0739880:intron | 30.0% |
| AAAATACGACAATATGTTCC+AGG | - | chr5_1:58460478-58460497 | None:intergenic | 30.0% | |
| ! | GTATTTTCAATGAGTTCGTA+TGG | + | chr5_1:58460491-58460510 | Msa0739880:intron | 30.0% |
| ! | GAAAAAAATTGTTCTGGGTT+AGG | - | chr5_1:58460549-58460568 | None:intergenic | 30.0% |
| ! | TTTTTCCCTTTTTATCTGCA+AGG | + | chr5_1:58460563-58460582 | Msa0739880:intron | 30.0% |
| GCTCATTTATTTGTAGTGAT+AGG | + | chr5_1:58460622-58460641 | Msa0739880:intron | 30.0% | |
| !!! | TTTGGCTATTGTTGTTTTGT+TGG | + | chr5_1:58460671-58460690 | Msa0739880:intron | 30.0% |
| TTATCGAGTAGATAGTCATT+TGG | + | chr5_1:58460706-58460725 | Msa0739880:intron | 30.0% | |
| TATCGAGTAGATAGTCATTT+GGG | + | chr5_1:58460707-58460726 | Msa0739880:intron | 30.0% | |
| TTGAAACATTCAAACGAAGA+TGG | - | chr5_1:58460760-58460779 | None:intergenic | 30.0% | |
| TTTGAGTGTATGCATTTATG+AGG | + | chr5_1:58461048-58461067 | Msa0739880:intron | 30.0% | |
| ACAAACAAAAGACACATTTG+AGG | - | chr5_1:58461298-58461317 | None:intergenic | 30.0% | |
| !! | GTGTCTTTTGTTTGTGAATA+TGG | + | chr5_1:58461303-58461322 | Msa0739880:intron | 30.0% |
| GAGGATAAACAAAGAGTAAA+CGG | - | chr5_1:58461446-58461465 | None:intergenic | 30.0% | |
| !!! | TGCTGAGGTTTGTTTTTATA+TGG | + | chr5_1:58461728-58461747 | Msa0739880:intron | 30.0% |
| !!! | TGAGGTTTGTTTTTATATGG+TGG | + | chr5_1:58461731-58461750 | Msa0739880:intron | 30.0% |
| ACTTCAACAATTGTAAGAAG+TGG | + | chr5_1:58461894-58461913 | Msa0739880:intron | 30.0% | |
| TGATAGTTATTCAGTTGGAA+TGG | - | chr5_1:58461952-58461971 | None:intergenic | 30.0% | |
| GAAGCAAATAGAAAGAAATC+TGG | + | chr5_1:58462029-58462048 | Msa0739880:CDS | 30.0% | |
| TGAAGAAGAAATTTGTGTTC+TGG | - | chr5_1:58462114-58462133 | None:intergenic | 30.0% | |
| GTTACTTCCCATCAAATATT+TGG | + | chr5_1:58462179-58462198 | Msa0739880:intron | 30.0% | |
| !! | GAACTCATATTTTTGTTTGC+AGG | + | chr5_1:58462265-58462284 | Msa0739880:intron | 30.0% |
| !! | TCATATTTTTGTTTGCAGGA+TGG | + | chr5_1:58462269-58462288 | Msa0739880:intron | 30.0% |
| !!! | TTTTAAGGCAAGTAGAAGAA+TGG | + | chr5_1:58462376-58462395 | Msa0739880:intron | 30.0% |
| ! | TTTAAGGCAAGTAGAAGAAT+GGG | + | chr5_1:58462377-58462396 | Msa0739880:intron | 30.0% |
| AATGTCATTGAGATATGTTG+GGG | - | chr5_1:58462459-58462478 | None:intergenic | 30.0% | |
| CAATGTCATTGAGATATGTT+GGG | - | chr5_1:58462460-58462479 | None:intergenic | 30.0% | |
| CACACTGTATTTCTTATAGA+AGG | + | chr5_1:58462928-58462947 | Msa0739880:intron | 30.0% | |
| GGTTGTTGAAATTAATGTGA+TGG | + | chr5_1:58463154-58463173 | Msa0739880:intron | 30.0% | |
| ! | CAATGCTCCTTAACTTATTT+TGG | - | chr5_1:58463456-58463475 | None:intergenic | 30.0% |
| TGAAACTGATATCAGCAAAT+CGG | - | chr5_1:58463559-58463578 | None:intergenic | 30.0% | |
| TTTGCTGATATCAGTTTCAA+AGG | + | chr5_1:58463560-58463579 | Msa0739880:CDS | 30.0% | |
| AAATATGAAGGGAAAGAAAG+AGG | - | chr5_1:58463815-58463834 | None:intergenic | 30.0% | |
| TTGAATTTATTACGCACCAA+TGG | + | chr5_1:58463840-58463859 | Msa0739880:intron | 30.0% | |
| AAAATGCATATGTCAAGCAT+TGG | - | chr5_1:58463993-58464012 | None:intergenic | 30.0% | |
| !! | GTGTTTCATTTTGGTAACAA+TGG | + | chr5_1:58464115-58464134 | Msa0739880:intron | 30.0% |
| ! | ATAGTACTGAAAAGGAAAAC+AGG | - | chr5_1:58464256-58464275 | None:intergenic | 30.0% |
| ! | AATGCCTAATAGTACTGAAA+AGG | - | chr5_1:58464264-58464283 | None:intergenic | 30.0% |
| ! | TTTCTATAACTTTTCTGTGG+TGG | + | chr5_1:58464308-58464327 | Msa0739880:intron | 30.0% |
| CAAACTACTGATATATGCAA+TGG | - | chr5_1:58464355-58464374 | None:intergenic | 30.0% | |
| ACAGAAAAAAGGAAACTGAT+TGG | - | chr5_1:58464491-58464510 | None:intergenic | 30.0% | |
| GACAAGTGTTAACAGAAAAA+AGG | - | chr5_1:58464502-58464521 | None:intergenic | 30.0% | |
| TTATTCTGCTCACTTTCTAA+TGG | + | chr5_1:58464824-58464843 | Msa0739880:intron | 30.0% | |
| TACTTCAAATCACTGCAAAA+AGG | - | chr5_1:58465366-58465385 | None:intergenic | 30.0% | |
| TGAAGTAAAAAATTTCCAGC+AGG | + | chr5_1:58465379-58465398 | Msa0739880:intron | 30.0% | |
| TTCATGGTTTAAATGCTCAA+TGG | + | chr5_1:58465441-58465460 | Msa0739880:CDS | 30.0% | |
| AGAAGAAGCAAAGTTACATA+AGG | + | chr5_1:58465471-58465490 | Msa0739880:CDS | 30.0% | |
| GTATAATATTCACAAGACCT+TGG | + | chr5_1:58465508-58465527 | Msa0739880:CDS | 30.0% | |
| ATAAACGAACAATATGACGA+TGG | - | chr5_1:58465535-58465554 | None:intergenic | 30.0% | |
| ATCGTCATATTGTTCGTTTA+TGG | + | chr5_1:58465534-58465553 | Msa0739880:CDS | 30.0% | |
| TCGTCATATTGTTCGTTTAT+GGG | + | chr5_1:58465535-58465554 | Msa0739880:CDS | 30.0% | |
| ! | TTGACTTTTGTGATAGACTA+TGG | + | chr5_1:58465656-58465675 | Msa0739880:intron | 30.0% |
| ! | TGACTTTTGTGATAGACTAT+GGG | + | chr5_1:58465657-58465676 | Msa0739880:intron | 30.0% |
| ACAGCTTATTAACATGTCAT+AGG | - | chr5_1:58465749-58465768 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCGTAAGTTATTC+TGG | - | chr5_1:58465796-58465815 | None:intergenic | 30.0% |
| TATTCATGTAAATAAGGCCT+TGG | - | chr5_1:58466056-58466075 | None:intergenic | 30.0% | |
| ! | ATCCATTATGATTTAAAGCC+TGG | + | chr5_1:58466093-58466112 | Msa0739880:intron | 30.0% |
| !! | TTCCAGGCTTTAAATCATAA+TGG | - | chr5_1:58466098-58466117 | None:intergenic | 30.0% |
| TCATCAAACAAAACATTTCC+AGG | - | chr5_1:58466114-58466133 | None:intergenic | 30.0% | |
| !!! | AATGTTTTGTTTGATGAGCT+CGG | + | chr5_1:58466117-58466136 | Msa0739880:intron | 30.0% |
| !!! | TTTTTTAAGTCGTGAATGCA+TGG | + | chr5_1:58466433-58466452 | Msa0739880:intron | 30.0% |
| ! | TCTCAATTTGTCAGTCATTT+TGG | + | chr5_1:58466475-58466494 | Msa0739880:intron | 30.0% |
| TAACATAAGTTTCGTGATGT+CGG | + | chr5_1:58466516-58466535 | Msa0739880:intron | 30.0% | |
| TCGTGAAGACACAATTATTA+AGG | + | chr5_1:58466704-58466723 | Msa0739880:CDS | 30.0% | |
| ATAATCTCAACTGTTGAAGA+AGG | + | chr5_1:58467187-58467206 | Msa0739880:intron | 30.0% | |
| ATTTCATCTACAAATTTGCC+AGG | + | chr5_1:58467374-58467393 | Msa0739880:intron | 30.0% | |
| TTTCTTATCTCAAATGAGTG+AGG | + | chr5_1:58467607-58467626 | Msa0739880:three_prime_UTR | 30.0% | |
| TTCTTATCTCAAATGAGTGA+GGG | + | chr5_1:58467608-58467627 | Msa0739880:three_prime_UTR | 30.0% | |
| ! | ACAAGAATTCCTTTTCGAAT+GGG | - | chr5_1:58467645-58467664 | None:intergenic | 30.0% |
| ! | AACAAGAATTCCTTTTCGAA+TGG | - | chr5_1:58467646-58467665 | None:intergenic | 30.0% |
| TATTCTTGCCACCAAATTAT+TGG | + | chr5_1:58467791-58467810 | Msa0739880:three_prime_UTR | 30.0% | |
| CAAATGAAAAGAAAATGCAG+CGG | - | chr5_1:58467835-58467854 | None:intergenic | 30.0% | |
| ! | CTGCATTTTCTTTTCATTTG+TGG | + | chr5_1:58467835-58467854 | Msa0739880:three_prime_UTR | 30.0% |
| ! | TGAAGCATCATTGCAAAACA+AGG | - | chr5_1:58458712-58458731 | None:intergenic | 35.0% |
| GACCCACGTAAAGAAAATTA+GGG | - | chr5_1:58458987-58459006 | None:intergenic | 35.0% | |
| ATTCGTGATCAGAGAGAAAA+AGG | - | chr5_1:58459025-58459044 | None:intergenic | 35.0% | |
| ! | TTTTTCTCTCTGATCACGAA+TGG | + | chr5_1:58459024-58459043 | Msa0739880:exon | 35.0% |
| ! | TTTTCTCTCTGATCACGAAT+GGG | + | chr5_1:58459025-58459044 | Msa0739880:exon | 35.0% |
| !!! | AATGGGTTTTGAGGTGAATT+TGG | - | chr5_1:58459056-58459075 | None:intergenic | 35.0% |
| AGTTACAGAAGCAACAATGT+CGG | + | chr5_1:58459186-58459205 | Msa0739880:intron | 35.0% | |
| TTTGATACATTCAAAGACGG+TGG | - | chr5_1:58459601-58459620 | None:intergenic | 35.0% | |
| CCCCAAATATATCTTTCGTT+AGG | + | chr5_1:58460033-58460052 | Msa0739880:intron | 35.0% | |
| CGCCTAACGAAAGATATATT+TGG | - | chr5_1:58460038-58460057 | None:intergenic | 35.0% | |
| !!! | CCCGATTTTAGTTTTAGATG+GGG | - | chr5_1:58460294-58460313 | None:intergenic | 35.0% |
| ! | CCCCATCTAAAACTAAAATC+GGG | + | chr5_1:58460291-58460310 | Msa0739880:intron | 35.0% |
| !!! | GACCCGATTTTAGTTTTAGA+TGG | - | chr5_1:58460296-58460315 | None:intergenic | 35.0% |
| !!! | TAGCGTGTTTTTTTCCGTTA+TGG | + | chr5_1:58460448-58460467 | Msa0739880:intron | 35.0% |
| ! | TTTTTCCGTTATGGATTTCC+TGG | + | chr5_1:58460457-58460476 | Msa0739880:intron | 35.0% |
| ATGTTCCAGGAAATCCATAA+CGG | - | chr5_1:58460465-58460484 | None:intergenic | 35.0% | |
| ATTCAGTCTCTCATACTACA+AGG | + | chr5_1:58460519-58460538 | Msa0739880:intron | 35.0% | |
| CCAAACCTTGCAGATAAAAA+GGG | - | chr5_1:58460571-58460590 | None:intergenic | 35.0% | |
| ACCAAACCTTGCAGATAAAA+AGG | - | chr5_1:58460572-58460591 | None:intergenic | 35.0% | |
| ! | TTTTTATCTGCAAGGTTTGG+TGG | + | chr5_1:58460571-58460590 | Msa0739880:intron | 35.0% |
| ! | GGGATTTTCAATTCTGATTG+TGG | + | chr5_1:58460643-58460662 | Msa0739880:intron | 35.0% |
| TTATTGAGTAAGTAGCCATC+TGG | + | chr5_1:58461187-58461206 | Msa0739880:intron | 35.0% | |
| TATTGAGTAAGTAGCCATCT+GGG | + | chr5_1:58461188-58461207 | Msa0739880:intron | 35.0% | |
| ! | CAAAGAGTAAACGGTCATTT+TGG | - | chr5_1:58461437-58461456 | None:intergenic | 35.0% |
| TCAGATAAATTGCTTGTGCT+TGG | + | chr5_1:58461819-58461838 | Msa0739880:intron | 35.0% | |
| ! | CTATATCAGGTTGTTACTGA+AGG | + | chr5_1:58461972-58461991 | Msa0739880:intron | 35.0% |
| TGAAGGAAGACAAACTAGTT+TGG | + | chr5_1:58461989-58462008 | Msa0739880:CDS | 35.0% | |
| AATAGAAAGAAATCTGGTCG+TGG | + | chr5_1:58462035-58462054 | Msa0739880:CDS | 35.0% | |
| TCTGGTCTGATCATTAGATT+TGG | - | chr5_1:58462096-58462115 | None:intergenic | 35.0% | |
| AGTTCTGTAACGAACAATCA+AGG | - | chr5_1:58462250-58462269 | None:intergenic | 35.0% | |
| GATCCGTTTCGTAATGATAA+TGG | + | chr5_1:58462302-58462321 | Msa0739880:CDS | 35.0% | |
| GCACCATTATCATTACGAAA+CGG | - | chr5_1:58462308-58462327 | None:intergenic | 35.0% | |
| !! | TGATAATGGTGCTTCATTAG+AGG | + | chr5_1:58462316-58462335 | Msa0739880:CDS | 35.0% |
| ATTGAGATATGTTGGGGAAA+GGG | - | chr5_1:58462453-58462472 | None:intergenic | 35.0% | |
| GCAATGTCATTGAGATATGT+TGG | - | chr5_1:58462461-58462480 | None:intergenic | 35.0% | |
| TATCTGTCCACAGTTAGAAA+AGG | + | chr5_1:58462634-58462653 | Msa0739880:CDS | 35.0% | |
| TTCACATCTCTTGTTGCAAT+AGG | - | chr5_1:58462675-58462694 | None:intergenic | 35.0% | |
| AACAAGAGATGTGAATCAGA+AGG | + | chr5_1:58462680-58462699 | Msa0739880:intron | 35.0% | |
| ! | TTCGCCCAAATTTTACTCAT+TGG | + | chr5_1:58462811-58462830 | Msa0739880:intron | 35.0% |
| ACACGGCATATATAATTCTC+AGG | + | chr5_1:58462863-58462882 | Msa0739880:intron | 35.0% | |
| CTCAGGTTCAGCAAAATTTA+AGG | + | chr5_1:58462880-58462899 | Msa0739880:intron | 35.0% | |
| ! | TTTCTTATAGAAGGTGCAAC+TGG | + | chr5_1:58462937-58462956 | Msa0739880:intron | 35.0% |
| ! | TTCTTATAGAAGGTGCAACT+GGG | + | chr5_1:58462938-58462957 | Msa0739880:intron | 35.0% |
| ! | ATTTTTGTCAGGTCGTACAA+CGG | - | chr5_1:58462998-58463017 | None:intergenic | 35.0% |
| !! | TGTTTGATTTTGGCACATGT+AGG | + | chr5_1:58463200-58463219 | Msa0739880:intron | 35.0% |
| GAAGGAATTGAAAGATCTTG+AGG | + | chr5_1:58463227-58463246 | Msa0739880:CDS | 35.0% | |
| TCTCTACAAAATTCAAGGAC+TGG | - | chr5_1:58463523-58463542 | None:intergenic | 35.0% | |
| ATGTTGGTGTAATCAGGTAT+AGG | + | chr5_1:58463637-58463656 | Msa0739880:intron | 35.0% | |
| AGAGGTTAGACATACAAGTT+GGG | - | chr5_1:58463797-58463816 | None:intergenic | 35.0% | |
| AAGAGGTTAGACATACAAGT+TGG | - | chr5_1:58463798-58463817 | None:intergenic | 35.0% | |
| TGAAGAAATTGTCCCAAAGA+GGG | - | chr5_1:58463895-58463914 | None:intergenic | 35.0% | |
| ATGAAGAAATTGTCCCAAAG+AGG | - | chr5_1:58463896-58463915 | None:intergenic | 35.0% | |
| AGAATCCAAGATCCTAATTG+AGG | - | chr5_1:58464150-58464169 | None:intergenic | 35.0% | |
| ! | TACTATTAGGCATTAGCTTG+TGG | + | chr5_1:58464270-58464289 | Msa0739880:intron | 35.0% |
| GAAACAACTACTCGAAACAA+AGG | + | chr5_1:58464417-58464436 | Msa0739880:intron | 35.0% | |
| !! | TTTTCTTGAATAACTTGCGC+TGG | - | chr5_1:58464456-58464475 | None:intergenic | 35.0% |
| AAACTACGAATGAAGGGAAA+GGG | - | chr5_1:58464592-58464611 | None:intergenic | 35.0% | |
| TGGTACAAACTACGAATGAA+GGG | - | chr5_1:58464598-58464617 | None:intergenic | 35.0% | |
| TTGGTACAAACTACGAATGA+AGG | - | chr5_1:58464599-58464618 | None:intergenic | 35.0% | |
| CATGAATATGCTCCTTAAGA+TGG | + | chr5_1:58464738-58464757 | Msa0739880:intron | 35.0% | |
| !! | TGTATCGATTAGCCATCTTA+AGG | - | chr5_1:58464753-58464772 | None:intergenic | 35.0% |
| TTATCTTCAGGCATGGAAAA+GGG | - | chr5_1:58464871-58464890 | None:intergenic | 35.0% | |
| ! | TTTTCCATGCCTGAAGATAA+GGG | + | chr5_1:58464871-58464890 | Msa0739880:intron | 35.0% |
| ! | CAGTCAGTAGAAGTATAAAG+AGG | - | chr5_1:58465016-58465035 | None:intergenic | 35.0% |
| !! | CTACTGACTGAACAATTTTC+AGG | + | chr5_1:58465026-58465045 | Msa0739880:intron | 35.0% |
| !! | AAGAAATTGTTTTGCGAGAG+AGG | + | chr5_1:58465052-58465071 | Msa0739880:CDS | 35.0% |
| !! | AGAAATTGTTTTGCGAGAGA+GGG | + | chr5_1:58465053-58465072 | Msa0739880:CDS | 35.0% |
| TTCGTGAAATGAAACGCATT+CGG | + | chr5_1:58465106-58465125 | Msa0739880:CDS | 35.0% | |
| CTTTCCAAGAAGGTTTAGAA+GGG | - | chr5_1:58465184-58465203 | None:intergenic | 35.0% | |
| CTTCTAAACCTTCTTGGAAA+GGG | + | chr5_1:58465183-58465202 | Msa0739880:CDS | 35.0% | |
| ! | AGAGTTCCTTTGCCTTTTAT+TGG | + | chr5_1:58465324-58465343 | Msa0739880:intron | 35.0% |
| CATTTGCCAATAAAAGGCAA+AGG | - | chr5_1:58465333-58465352 | None:intergenic | 35.0% | |
| GTTACATAAGGCATGCAATT+CGG | + | chr5_1:58465483-58465502 | Msa0739880:CDS | 35.0% | |
| TTACATAAGGCATGCAATTC+GGG | + | chr5_1:58465484-58465503 | Msa0739880:CDS | 35.0% | |
| AGAACAGTGCAGAATGTATT+TGG | - | chr5_1:58465578-58465597 | None:intergenic | 35.0% | |
| ! | AAGTTATTCTGGAGAGCTTA+TGG | - | chr5_1:58465785-58465804 | None:intergenic | 35.0% |
| !! | ATTGCCAAAGTGACTGATTT+TGG | + | chr5_1:58466141-58466160 | Msa0739880:intron | 35.0% |
| AAGACCAAAATCAGTCACTT+TGG | - | chr5_1:58466148-58466167 | None:intergenic | 35.0% | |
| !!! | TTTTGGTCTTAGCAAGATTG+TGG | + | chr5_1:58466158-58466177 | Msa0739880:intron | 35.0% |
| AAGATTGTGGAGAATGATGT+GGG | + | chr5_1:58466171-58466190 | Msa0739880:intron | 35.0% | |
| GTGATGAAGATCATTGTTGT+AGG | + | chr5_1:58466243-58466262 | Msa0739880:intron | 35.0% | |
| TTGAAGTGATCCAAACTTGT+TGG | + | chr5_1:58466276-58466295 | Msa0739880:intron | 35.0% | |
| ATGACCTTGGATGATATAAG+AGG | - | chr5_1:58466407-58466426 | None:intergenic | 35.0% | |
| !! | TTGTCAGTCATTTTGGTCAA+TGG | + | chr5_1:58466482-58466501 | Msa0739880:intron | 35.0% |
| TTGTGCAAACAACTAAGTGT+TGG | + | chr5_1:58466541-58466560 | Msa0739880:intron | 35.0% | |
| ! | CACATAACATTTCTGACTTG+TGG | + | chr5_1:58466585-58466604 | Msa0739880:intron | 35.0% |
| ! | ATTTCTGACTTGTGGAAAAC+AGG | + | chr5_1:58466593-58466612 | Msa0739880:intron | 35.0% |
| ! | GAAGTATTCTCTCTTGTGTT+TGG | - | chr5_1:58466686-58466705 | None:intergenic | 35.0% |
| TTAGAAACAGTAGGTCTTGA+GGG | - | chr5_1:58466747-58466766 | None:intergenic | 35.0% | |
| ATTAGAAACAGTAGGTCTTG+AGG | - | chr5_1:58466748-58466767 | None:intergenic | 35.0% | |
| !! | AAGACCTACTGTTTCTAATG+AGG | + | chr5_1:58466749-58466768 | Msa0739880:CDS | 35.0% |
| TTTGCCTCATTAGAAACAGT+AGG | - | chr5_1:58466756-58466775 | None:intergenic | 35.0% | |
| !! | TACTGTTTCTAATGAGGCAA+AGG | + | chr5_1:58466755-58466774 | Msa0739880:CDS | 35.0% |
| ! | ACACAATCTTCACCTGTTTT+AGG | + | chr5_1:58466868-58466887 | Msa0739880:intron | 35.0% |
| CACAGTCAGATAAATTGTCA+AGG | - | chr5_1:58466945-58466964 | None:intergenic | 35.0% | |
| ! | TTGCAGCAATGAGAAAGTAT+TGG | + | chr5_1:58467032-58467051 | Msa0739880:intron | 35.0% |
| ! | GGAGTGTTATTCAGAGAAAA+CGG | - | chr5_1:58467277-58467296 | None:intergenic | 35.0% |
| GATGAAATAGAGATATCGTC+AGG | - | chr5_1:58467362-58467381 | None:intergenic | 35.0% | |
| GTATGTGAGATATGGATCTT+GGG | - | chr5_1:58467460-58467479 | None:intergenic | 35.0% | |
| TTCTTCACGTATGTGAGATA+TGG | - | chr5_1:58467468-58467487 | None:intergenic | 35.0% | |
| AGTAGTGATGTTCATTGACA+TGG | + | chr5_1:58467487-58467506 | Msa0739880:exon | 35.0% | |
| AGAATTTGTATAGGCTGTTG+AGG | + | chr5_1:58467583-58467602 | Msa0739880:three_prime_UTR | 35.0% | |
| ! | AGGATTTTTCCCATTCGAAA+AGG | + | chr5_1:58467633-58467652 | Msa0739880:three_prime_UTR | 35.0% |
| ATACATCATTGACCCTTTCA+AGG | - | chr5_1:58467735-58467754 | None:intergenic | 35.0% | |
| TGAAAGGGTCAATGATGTAT+AGG | + | chr5_1:58467735-58467754 | Msa0739880:three_prime_UTR | 35.0% | |
| GCAAAACAAGGAAGTAGTAG+AGG | - | chr5_1:58458700-58458719 | None:intergenic | 40.0% | |
| ! | AGTGGTGGAATCAAAAGCTT+GGG | - | chr5_1:58458774-58458793 | None:intergenic | 40.0% |
| !! | AGACTAGGGTTTGTTAAGAG+TGG | - | chr5_1:58458792-58458811 | None:intergenic | 40.0% |
| CGACCCACGTAAAGAAAATT+AGG | - | chr5_1:58458988-58459007 | None:intergenic | 40.0% | |
| GTCGAATTCTTCGAACCAAT+CGG | + | chr5_1:58459231-58459250 | Msa0739880:CDS | 40.0% | |
| TCCAACTTGGCAATCTTTGT+AGG | - | chr5_1:58459268-58459287 | None:intergenic | 40.0% | |
| GTTTCTTCTGCTGGGAAATT+CGG | + | chr5_1:58459346-58459365 | Msa0739880:CDS | 40.0% | |
| TCAGAATCACTTGAACTGCA+AGG | - | chr5_1:58459400-58459419 | None:intergenic | 40.0% | |
| CTCATCTTGCAGATAAAAGG+TGG | - | chr5_1:58459440-58459459 | None:intergenic | 40.0% | |
| AACAACGTTCGACCTATTCA+TGG | - | chr5_1:58459972-58459991 | None:intergenic | 40.0% | |
| !! | ACATAGTGGACAACATCTCA+AGG | - | chr5_1:58460100-58460119 | None:intergenic | 40.0% |
| TACGTATTCGAGCTACATAG+TGG | - | chr5_1:58460114-58460133 | None:intergenic | 40.0% | |
| TGTAGCTCGAATACGTAATG+CGG | + | chr5_1:58460117-58460136 | Msa0739880:intron | 40.0% | |
| ! | CCCTTTTTATCTGCAAGGTT+TGG | + | chr5_1:58460568-58460587 | Msa0739880:intron | 40.0% |
| !! | AGTCATTTGGGTTCTGAATG+TGG | + | chr5_1:58460719-58460738 | Msa0739880:intron | 40.0% |
| TACGTATTCGAGCTTCATAG+TGG | - | chr5_1:58460876-58460895 | None:intergenic | 40.0% | |
| ! | ATCCCTTTTTATCTGCGAGA+TGG | + | chr5_1:58461016-58461035 | Msa0739880:intron | 40.0% |
| ! | TCCCTTTTTATCTGCGAGAT+GGG | + | chr5_1:58461017-58461036 | Msa0739880:intron | 40.0% |
| ACCCATCTCGCAGATAAAAA+GGG | - | chr5_1:58461021-58461040 | None:intergenic | 40.0% | |
| AACCCATCTCGCAGATAAAA+AGG | - | chr5_1:58461022-58461041 | None:intergenic | 40.0% | |
| !! | TTTTATCTGCGAGATGGGTT+TGG | + | chr5_1:58461022-58461041 | Msa0739880:intron | 40.0% |
| TAAAACGCCCAACACATTCA+TGG | - | chr5_1:58461215-58461234 | None:intergenic | 40.0% | |
| AGTCAAGGACTTTAGCGATA+CGG | + | chr5_1:58461394-58461413 | Msa0739880:intron | 40.0% | |
| ! | GGTCGAATGTGTTCTTTTGA+TGG | + | chr5_1:58461578-58461597 | Msa0739880:intron | 40.0% |
| CTTTCTATTCCAGAATGGTG+CGG | + | chr5_1:58461635-58461654 | Msa0739880:intron | 40.0% | |
| ! | TTTTAAGCGCTTACGTGTGT+TGG | - | chr5_1:58461676-58461695 | None:intergenic | 40.0% |
| ACATGATCGTTATCATCGTG+AGG | - | chr5_1:58461699-58461718 | None:intergenic | 40.0% | |
| !! | TCATGTTTTTGAACGTGCTG+AGG | + | chr5_1:58461713-58461732 | Msa0739880:CDS | 40.0% |
| GCCGTGTCTCATTGAAAATA+CGG | + | chr5_1:58461789-58461808 | Msa0739880:intron | 40.0% | |
| ! | GCCGTATTTTCAATGAGACA+CGG | - | chr5_1:58461793-58461812 | None:intergenic | 40.0% |
| AGTGGTACTCTGTCTCAATT+TGG | + | chr5_1:58461912-58461931 | Msa0739880:intron | 40.0% | |
| TCAACAGTTTCGGCTTCAAA+TGG | + | chr5_1:58462131-58462150 | Msa0739880:CDS | 40.0% | |
| ! | AGTTCCACGTGCAAGTTTTA+AGG | + | chr5_1:58462361-58462380 | Msa0739880:intron | 40.0% |
| CATTGAGATATGTTGGGGAA+AGG | - | chr5_1:58462454-58462473 | None:intergenic | 40.0% | |
| ACGTGCAAAAGTTGTTGTGT+TGG | + | chr5_1:58462565-58462584 | Msa0739880:CDS | 40.0% | |
| TGCAAAAGTTGTTGTGTTGG+AGG | + | chr5_1:58462568-58462587 | Msa0739880:CDS | 40.0% | |
| ACAGATATTCTGATGCTGAG+AGG | - | chr5_1:58462621-58462640 | None:intergenic | 40.0% | |
| GTTGTACGACCTGACAAAAA+TGG | + | chr5_1:58462997-58463016 | Msa0739880:intron | 40.0% | |
| !!! | GTTTCACTGCCATTTTTGTC+AGG | - | chr5_1:58463009-58463028 | None:intergenic | 40.0% |
| TGAGGAGCAAATGAAACCTA+AGG | + | chr5_1:58463245-58463264 | Msa0739880:CDS | 40.0% | |
| ! | TTTTGTGCCTTGAGAGAATC+GGG | - | chr5_1:58463312-58463331 | None:intergenic | 40.0% |
| ! | GTTTTGTGCCTTGAGAGAAT+CGG | - | chr5_1:58463313-58463332 | None:intergenic | 40.0% |
| TCAAGGCACAAAACTCCTAT+TGG | + | chr5_1:58463319-58463338 | Msa0739880:intron | 40.0% | |
| AGGACTGGATGTTAATATGC+CGG | - | chr5_1:58463508-58463527 | None:intergenic | 40.0% | |
| ! | AGCAAGACTAAAAGTACGAC+AGG | + | chr5_1:58463596-58463615 | Msa0739880:CDS | 40.0% |
| TCATTGAGACTCGGAAATGT+TGG | + | chr5_1:58463621-58463640 | Msa0739880:CDS | 40.0% | |
| TCGGAAATGTTGGTGTAATC+AGG | + | chr5_1:58463631-58463650 | Msa0739880:CDS | 40.0% | |
| AACTGTCTTAACTGAGACCT+GGG | + | chr5_1:58463741-58463760 | Msa0739880:CDS | 40.0% | |
| GTAGATGTCTTACCCTCTTT+GGG | + | chr5_1:58463880-58463899 | Msa0739880:intron | 40.0% | |
| !!! | TGGTTTTATGGGCCTCAATT+AGG | + | chr5_1:58464135-58464154 | Msa0739880:intron | 40.0% |
| GTACTGAAAAGGAAAACAGG+TGG | - | chr5_1:58464253-58464272 | None:intergenic | 40.0% | |
| ACAACTACTCGAAACAAAGG+AGG | + | chr5_1:58464420-58464439 | Msa0739880:CDS | 40.0% | |
| AACACTTGTCTTCCTGAACT+TGG | + | chr5_1:58464512-58464531 | Msa0739880:intron | 40.0% | |
| ACACTTGTCTTCCTGAACTT+GGG | + | chr5_1:58464513-58464532 | Msa0739880:intron | 40.0% | |
| CAAACTACGAATGAAGGGAA+AGG | - | chr5_1:58464593-58464612 | None:intergenic | 40.0% | |
| CTTATCTTCAGGCATGGAAA+AGG | - | chr5_1:58464872-58464891 | None:intergenic | 40.0% | |
| ! | CTTTTCCATGCCTGAAGATA+AGG | + | chr5_1:58464870-58464889 | Msa0739880:intron | 40.0% |
| GGAAGATATTCTCATTCACG+AGG | + | chr5_1:58464924-58464943 | Msa0739880:CDS | 40.0% | |
| TCGTGAAATGAAACGCATTC+GGG | + | chr5_1:58465107-58465126 | Msa0739880:CDS | 40.0% | |
| CCTTTCCAAGAAGGTTTAGA+AGG | - | chr5_1:58465185-58465204 | None:intergenic | 40.0% | |
| CCTTCTAAACCTTCTTGGAA+AGG | + | chr5_1:58465182-58465201 | Msa0739880:CDS | 40.0% | |
| !! | AAAGGAACTCTCTAGGATTC+TGG | - | chr5_1:58465315-58465334 | None:intergenic | 40.0% |
| AAAAGGCAAAGGAACTCTCT+AGG | - | chr5_1:58465322-58465341 | None:intergenic | 40.0% | |
| !! | TTTCCAGCAGGCTTTTGATT+TGG | + | chr5_1:58465391-58465410 | Msa0739880:intron | 40.0% |
| TATGTTGCATGCAAGCTTCA+TGG | + | chr5_1:58465425-58465444 | Msa0739880:CDS | 40.0% | |
| AACAATATGACGATGGACCA+AGG | - | chr5_1:58465528-58465547 | None:intergenic | 40.0% | |
| !! | ACTGTTCTAGAGTATTGCAG+CGG | + | chr5_1:58465590-58465609 | Msa0739880:intron | 40.0% |
| TGATAGACTATGGGTCTGTT+TGG | + | chr5_1:58465666-58465685 | Msa0739880:intron | 40.0% | |
| AACACCTATATTGCCTGAGA+AGG | + | chr5_1:58466002-58466021 | Msa0739880:CDS | 40.0% | |
| CAAGATTGTGGAGAATGATG+TGG | + | chr5_1:58466170-58466189 | Msa0739880:intron | 40.0% | |
| CACAATTATTAAGGCACGCA+AGG | + | chr5_1:58466713-58466732 | Msa0739880:CDS | 40.0% | |
| GTTTCTAATGAGGCAAAGGT+AGG | + | chr5_1:58466759-58466778 | Msa0739880:intron | 40.0% | |
| CGGGCAGTACTTATCATTAA+AGG | - | chr5_1:58466791-58466810 | None:intergenic | 40.0% | |
| GCCAAAGAACAATTAGCTAC+GGG | - | chr5_1:58466810-58466829 | None:intergenic | 40.0% | |
| GGCCAAAGAACAATTAGCTA+CGG | - | chr5_1:58466811-58466830 | None:intergenic | 40.0% | |
| TCCGACTTTATTCTATGTGC+AGG | + | chr5_1:58466910-58466929 | Msa0739880:intron | 40.0% | |
| GCCTGCACATAGAATAAAGT+CGG | - | chr5_1:58466914-58466933 | None:intergenic | 40.0% | |
| TAACACTCCTCACAGTTTAG+AGG | + | chr5_1:58467288-58467307 | Msa0739880:intron | 40.0% | |
| ! | TTTGGTTCCTCTAAACTGTG+AGG | - | chr5_1:58467298-58467317 | None:intergenic | 40.0% |
| TTTGCCAGGAATTTATACGG+CGG | + | chr5_1:58467388-58467407 | Msa0739880:intron | 40.0% | |
| CGTATGTGAGATATGGATCT+TGG | - | chr5_1:58467461-58467480 | None:intergenic | 40.0% | |
| !!! | ATGCTTTTTTGGTGGGGAAA+GGG | - | chr5_1:58467521-58467540 | None:intergenic | 40.0% |
| !!! | TATGCTTTTTTGGTGGGGAA+AGG | - | chr5_1:58467522-58467541 | None:intergenic | 40.0% |
| ! | TTCCCCACCAAAAAAGCATA+TGG | + | chr5_1:58467522-58467541 | Msa0739880:three_prime_UTR | 40.0% |
| ! | TCCCCACCAAAAAAGCATAT+GGG | + | chr5_1:58467523-58467542 | Msa0739880:three_prime_UTR | 40.0% |
| !!! | TCCCCATATGCTTTTTTGGT+GGG | - | chr5_1:58467528-58467547 | None:intergenic | 40.0% |
| !!! | ATCCCCATATGCTTTTTTGG+TGG | - | chr5_1:58467529-58467548 | None:intergenic | 40.0% |
| !!! | GAGATCCCCATATGCTTTTT+TGG | - | chr5_1:58467532-58467551 | None:intergenic | 40.0% |
| ATCTCAAATGAGTGAGGGAA+AGG | + | chr5_1:58467613-58467632 | Msa0739880:three_prime_UTR | 40.0% | |
| !!! | CAACTAGCTTTTTGCTACTC+CGG | - | chr5_1:58467701-58467720 | None:intergenic | 40.0% |
| !! | TGAGTTGACTTGACCTTGAA+AGG | + | chr5_1:58467719-58467738 | Msa0739880:three_prime_UTR | 40.0% |
| !! | GAGTTGACTTGACCTTGAAA+GGG | + | chr5_1:58467720-58467739 | Msa0739880:three_prime_UTR | 40.0% |
| GTGGAATCAAAAGCTTGGGA+GGG | - | chr5_1:58458770-58458789 | None:intergenic | 45.0% | |
| ! | GAGTGGTGGAATCAAAAGCT+TGG | - | chr5_1:58458775-58458794 | None:intergenic | 45.0% |
| !! | CTAGGGTTTGTTAAGAGTGG+TGG | - | chr5_1:58458789-58458808 | None:intergenic | 45.0% |
| AGAGAGAGAGAGAGAGACTA+GGG | - | chr5_1:58458806-58458825 | None:intergenic | 45.0% | |
| ! | TGGGTGTGTTGATGTTGTGA+AGG | - | chr5_1:58458893-58458912 | None:intergenic | 45.0% |
| GCCTACAAAGATTGCCAAGT+TGG | + | chr5_1:58459264-58459283 | Msa0739880:CDS | 45.0% | |
| AAGTTGGAAGCTCGAATGGT+GGG | + | chr5_1:58459280-58459299 | Msa0739880:CDS | 45.0% | |
| TCAACTGCTTCTCAGCAACA+AGG | + | chr5_1:58459313-58459332 | Msa0739880:CDS | 45.0% | |
| TGGAGTAGCAGCTGAAGAAA+TGG | + | chr5_1:58459369-58459388 | Msa0739880:CDS | 45.0% | |
| ACATTCAAAGACGGTGGTGA+CGG | - | chr5_1:58459595-58459614 | None:intergenic | 45.0% | |
| CACAGTGGACAACACATTCA+AGG | - | chr5_1:58459699-58459718 | None:intergenic | 45.0% | |
| CACTGTGAAGCTCGAATATG+CGG | + | chr5_1:58459712-58459731 | Msa0739880:intron | 45.0% | |
| ACTGTGAAGCTCGAATATGC+GGG | + | chr5_1:58459713-58459732 | Msa0739880:intron | 45.0% | |
| AGCCATTTGGGTCCATGAAT+AGG | + | chr5_1:58459957-58459976 | Msa0739880:intron | 45.0% | |
| GACCTATTCATGGACCCAAA+TGG | - | chr5_1:58459962-58459981 | None:intergenic | 45.0% | |
| GTAGCTCGAATACGTAATGC+GGG | + | chr5_1:58460118-58460137 | Msa0739880:intron | 45.0% | |
| !! | TGCAAGGTTTGGTGGTTTGA+GGG | + | chr5_1:58460579-58460598 | Msa0739880:intron | 45.0% |
| !! | CATAGTGGACAGCACATTCA+AGG | - | chr5_1:58460861-58460880 | None:intergenic | 45.0% |
| TGAAGCTCGAATACGTAGTG+CGG | + | chr5_1:58460879-58460898 | Msa0739880:intron | 45.0% | |
| AACACATTCATGGACCCAGA+TGG | - | chr5_1:58461205-58461224 | None:intergenic | 45.0% | |
| ATCTGGGTCCATGAATGTGT+TGG | + | chr5_1:58461204-58461223 | Msa0739880:intron | 45.0% | |
| TCTGGGTCCATGAATGTGTT+GGG | + | chr5_1:58461205-58461224 | Msa0739880:intron | 45.0% | |
| GTGTCTCGACTCTCGATTAA+TGG | - | chr5_1:58461345-58461364 | None:intergenic | 45.0% | |
| CGAGAGTCGAGACACATTTA+TGG | + | chr5_1:58461350-58461369 | Msa0739880:intron | 45.0% | |
| TCAAGAAATCCGCACCATTC+TGG | - | chr5_1:58461647-58461666 | None:intergenic | 45.0% | |
| AAGAAATCTGGTCGTGGAAG+AGG | + | chr5_1:58462041-58462060 | Msa0739880:CDS | 45.0% | |
| AGAAATCTGGTCGTGGAAGA+GGG | + | chr5_1:58462042-58462061 | Msa0739880:CDS | 45.0% | |
| CTTGCCTTAAAACTTGCACG+TGG | - | chr5_1:58462368-58462387 | None:intergenic | 45.0% | |
| AAGGCAAGTAGAAGAATGGG+TGG | + | chr5_1:58462380-58462399 | Msa0739880:intron | 45.0% | |
| ! | GTCGTACAACGGATTTGGTT+TGG | - | chr5_1:58462987-58463006 | None:intergenic | 45.0% |
| TTGGCACATGTAGGAACTGA+AGG | + | chr5_1:58463209-58463228 | Msa0739880:intron | 45.0% | |
| TTTCCTTCCCGATTCTCTCA+AGG | + | chr5_1:58463302-58463321 | Msa0739880:intron | 45.0% | |
| GAACTGTCTTAACTGAGACC+TGG | + | chr5_1:58463740-58463759 | Msa0739880:CDS | 45.0% | |
| TTAACTGAGACCTGGGAAGA+TGG | + | chr5_1:58463748-58463767 | Msa0739880:CDS | 45.0% | |
| CGTAGATGTCTTACCCTCTT+TGG | + | chr5_1:58463879-58463898 | Msa0739880:intron | 45.0% | |
| ATGGGCCTCAATTAGGATCT+TGG | + | chr5_1:58464142-58464161 | Msa0739880:intron | 45.0% | |
| CACTTGTCTTCCTGAACTTG+GGG | + | chr5_1:58464514-58464533 | Msa0739880:intron | 45.0% | |
| AGGGAAAGGAAAAGCGGAAA+AGG | - | chr5_1:58464573-58464592 | None:intergenic | 45.0% | |
| AGGGAAAGGGAAAGGAAAAG+CGG | - | chr5_1:58464579-58464598 | None:intergenic | 45.0% | |
| ACGAATGAAGGGAAAGGGAA+AGG | - | chr5_1:58464587-58464606 | None:intergenic | 45.0% | |
| ATCACCCTTATCTTCAGGCA+TGG | - | chr5_1:58464878-58464897 | None:intergenic | 45.0% | |
| ATGCCTGAAGATAAGGGTGA+TGG | + | chr5_1:58464877-58464896 | Msa0739880:intron | 45.0% | |
| TGCCTGAAGATAAGGGTGAT+GGG | + | chr5_1:58464878-58464897 | Msa0739880:intron | 45.0% | |
| ATCCCATCACCCTTATCTTC+AGG | - | chr5_1:58464883-58464902 | None:intergenic | 45.0% | |
| ! | CTCGACTAGCCAGCATTAAA+CGG | + | chr5_1:58464959-58464978 | Msa0739880:CDS | 45.0% |
| ! | TCGACTAGCCAGCATTAAAC+GGG | + | chr5_1:58464960-58464979 | Msa0739880:CDS | 45.0% |
| GCAACTTACCCGTTTAATGC+TGG | - | chr5_1:58464971-58464990 | None:intergenic | 45.0% | |
| ! | TTCCCTTCTCTAGTTCGTAG+CGG | - | chr5_1:58465080-58465099 | None:intergenic | 45.0% |
| AAACGCATTCGGGATGAAGA+TGG | + | chr5_1:58465117-58465136 | Msa0739880:CDS | 45.0% | |
| TTCGGGATGAAGATGGTTCA+CGG | + | chr5_1:58465124-58465143 | Msa0739880:CDS | 45.0% | |
| TACGCCCTTCTAAACCTTCT+TGG | + | chr5_1:58465177-58465196 | Msa0739880:CDS | 45.0% | |
| CTAAACCTTCTTGGAAAGGG+AGG | + | chr5_1:58465186-58465205 | Msa0739880:CDS | 45.0% | |
| TGAATCCTCCCTTTCCAAGA+AGG | - | chr5_1:58465194-58465213 | None:intergenic | 45.0% | |
| ATCTTTCCCTGGTAGAACAG+AGG | - | chr5_1:58465962-58465981 | None:intergenic | 45.0% | |
| ACAGCATCAAGATCTTTCCC+TGG | - | chr5_1:58465973-58465992 | None:intergenic | 45.0% | |
| ACCTATATTGCCTGAGAAGG+AGG | + | chr5_1:58466005-58466024 | Msa0739880:CDS | 45.0% | |
| GGATGTAAGTTCCATACCCT+GGG | - | chr5_1:58466199-58466218 | None:intergenic | 45.0% | |
| GGTATGGAACTTACATCCCA+GGG | + | chr5_1:58466201-58466220 | Msa0739880:intron | 45.0% | |
| GTATGGAACTTACATCCCAG+GGG | + | chr5_1:58466202-58466221 | Msa0739880:intron | 45.0% | |
| TATGGAACTTACATCCCAGG+GGG | + | chr5_1:58466203-58466222 | Msa0739880:intron | 45.0% | |
| ! | TTGCTGAGCTCAAAGCATTC+AGG | - | chr5_1:58466380-58466399 | None:intergenic | 45.0% |
| GACGCCTCTTATATCATCCA+AGG | + | chr5_1:58466400-58466419 | Msa0739880:CDS | 45.0% | |
| !! | GTGGAAAACAGGTTGATGTC+TGG | + | chr5_1:58466604-58466623 | Msa0739880:intron | 45.0% |
| TGTGTTTGGTCATGTCCGAA+AGG | - | chr5_1:58466672-58466691 | None:intergenic | 45.0% | |
| GCCCGTAGCTAATTGTTCTT+TGG | + | chr5_1:58466806-58466825 | Msa0739880:intron | 45.0% | |
| GACTGTGCAAATTCTCTCCT+CGG | + | chr5_1:58466958-58466977 | Msa0739880:intron | 45.0% | |
| ! | TAATGGGCATTGTGATACCG+AGG | - | chr5_1:58466978-58466997 | None:intergenic | 45.0% |
| GCGGTGTCTAACATATAACC+AGG | + | chr5_1:58467407-58467426 | Msa0739880:CDS | 45.0% | |
| TGGGCAATGGTCAATACATC+TGG | - | chr5_1:58467441-58467460 | None:intergenic | 45.0% | |
| GAGATATGGATCTTGGGCAA+TGG | - | chr5_1:58467454-58467473 | None:intergenic | 45.0% | |
| !!! | CCCCATATGCTTTTTTGGTG+GGG | - | chr5_1:58467527-58467546 | None:intergenic | 45.0% |
| ! | CCCCACCAAAAAAGCATATG+GGG | + | chr5_1:58467524-58467543 | Msa0739880:three_prime_UTR | 45.0% |
| GGTGGAATCAAAAGCTTGGG+AGG | - | chr5_1:58458771-58458790 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGACT+AGG | - | chr5_1:58458807-58458826 | None:intergenic | 50.0% | |
| TAGGCAGAGACTGATCCGAT+TGG | - | chr5_1:58459249-58459268 | None:intergenic | 50.0% | |
| ! | TGCCAAGTTGGAAGCTCGAA+TGG | + | chr5_1:58459276-58459295 | Msa0739880:CDS | 50.0% |
| CACCATTCGAGCTTCCAACT+TGG | - | chr5_1:58459281-58459300 | None:intergenic | 50.0% | |
| ! | CAAGTTGGAAGCTCGAATGG+TGG | + | chr5_1:58459279-58459298 | Msa0739880:CDS | 50.0% |
| ! | GAAGCTCGAATGGTGGGAAA+AGG | + | chr5_1:58459286-58459305 | Msa0739880:CDS | 50.0% |
| CTGCTTCTCAGCAACAAGGT+TGG | + | chr5_1:58459317-58459336 | Msa0739880:CDS | 50.0% | |
| !! | TCAGCAACAAGGTTGGCCTT+CGG | + | chr5_1:58459324-58459343 | Msa0739880:CDS | 50.0% |
| TTCCCAGCAGAAGAAACCGA+AGG | - | chr5_1:58459343-58459362 | None:intergenic | 50.0% | |
| TCTTCTGCTGGGAAATTCGG+TGG | + | chr5_1:58459349-58459368 | Msa0739880:CDS | 50.0% | |
| CGCATATTCGAGCTTCACAG+TGG | - | chr5_1:58459714-58459733 | None:intergenic | 50.0% | |
| TGAAGCTCGAATATGCGGGT+GGG | + | chr5_1:58459717-58459736 | Msa0739880:intron | 50.0% | |
| CTCGAATACGTAATGCGGGT+GGG | + | chr5_1:58460122-58460141 | Msa0739880:intron | 50.0% | |
| TCGAATACGTAATGCGGGTG+GGG | + | chr5_1:58460123-58460142 | Msa0739880:intron | 50.0% | |
| !! | CTGCAAGGTTTGGTGGTTTG+AGG | + | chr5_1:58460578-58460597 | Msa0739880:intron | 50.0% |
| GAAGCTCGAATACGTAGTGC+GGG | + | chr5_1:58460880-58460899 | Msa0739880:intron | 50.0% | |
| GATACGGTCTCGCTCATTTG+AGG | + | chr5_1:58461410-58461429 | Msa0739880:intron | 50.0% | |
| ! | GTCAGGTCGTACAACGGATT+TGG | - | chr5_1:58462992-58463011 | None:intergenic | 50.0% |
| CGACAGGACTCATTGAGACT+CGG | + | chr5_1:58463612-58463631 | Msa0739880:CDS | 50.0% | |
| GGAAGATGGTCAGGCGTTAA+AGG | + | chr5_1:58463762-58463781 | Msa0739880:CDS | 50.0% | |
| TCTTCCTGAACTTGGGGAAG+AGG | + | chr5_1:58464520-58464539 | Msa0739880:intron | 50.0% | |
| CTTCCTGAACTTGGGGAAGA+GGG | + | chr5_1:58464521-58464540 | Msa0739880:intron | 50.0% | |
| TTCCTGAACTTGGGGAAGAG+GGG | + | chr5_1:58464522-58464541 | Msa0739880:intron | 50.0% | |
| GACCGCTACGAACTAGAGAA+GGG | + | chr5_1:58465075-58465094 | Msa0739880:CDS | 50.0% | |
| ! | GGTTTAGAAGGGCGTAACGA+TGG | - | chr5_1:58465173-58465192 | None:intergenic | 50.0% |
| AGGATTCAGCGAGGTGTACA+AGG | + | chr5_1:58465206-58465225 | Msa0739880:intron | 50.0% | |
| CCACCAAATCAAAAGCCTGC+TGG | - | chr5_1:58465397-58465416 | None:intergenic | 50.0% | |
| !!! | CCAGCAGGCTTTTGATTTGG+TGG | + | chr5_1:58465394-58465413 | Msa0739880:intron | 50.0% |
| TGATCCTCCTCTGTTCTACC+AGG | + | chr5_1:58465952-58465971 | Msa0739880:intron | 50.0% | |
| GATCCTCCTCTGTTCTACCA+GGG | + | chr5_1:58465953-58465972 | Msa0739880:intron | 50.0% | |
| TTTCCCTGGTAGAACAGAGG+AGG | - | chr5_1:58465959-58465978 | None:intergenic | 50.0% | |
| GCCTCCTTCTCAGGCAATAT+AGG | - | chr5_1:58466009-58466028 | None:intergenic | 50.0% | |
| ATGACTCTAGCCTCCTTCTC+AGG | - | chr5_1:58466018-58466037 | None:intergenic | 50.0% | |
| GAGAATGATGTGGGATCCCA+GGG | + | chr5_1:58466180-58466199 | Msa0739880:intron | 50.0% | |
| GGGATGTAAGTTCCATACCC+TGG | - | chr5_1:58466200-58466219 | None:intergenic | 50.0% | |
| GGGTATGGAACTTACATCCC+AGG | + | chr5_1:58466200-58466219 | Msa0739880:intron | 50.0% | |
| ! | CTGAGCTCAAAGCATTCAGG+AGG | - | chr5_1:58466377-58466396 | None:intergenic | 50.0% |
| GACACCGCCGTATAAATTCC+TGG | - | chr5_1:58467395-58467414 | None:intergenic | 50.0% | |
| ATACATCTGGTCTCTCAGCC+TGG | - | chr5_1:58467428-58467447 | None:intergenic | 50.0% | |
| TGGCCTTCGGTTTCTTCTGC+TGG | + | chr5_1:58459337-58459356 | Msa0739880:CDS | 55.0% | |
| GGCCTTCGGTTTCTTCTGCT+GGG | + | chr5_1:58459338-58459357 | Msa0739880:CDS | 55.0% | |
| GTGAAGCTCGAATATGCGGG+TGG | + | chr5_1:58459716-58459735 | Msa0739880:intron | 55.0% | |
| GAAGCTCGAATATGCGGGTG+GGG | + | chr5_1:58459718-58459737 | Msa0739880:intron | 55.0% | |
| GCTCGAATACGTAATGCGGG+TGG | + | chr5_1:58460121-58460140 | Msa0739880:intron | 55.0% | |
| CTCGAATACGTAGTGCGGGT+GGG | + | chr5_1:58460884-58460903 | Msa0739880:intron | 55.0% | |
| TCGAATACGTAGTGCGGGTG+GGG | + | chr5_1:58460885-58460904 | Msa0739880:intron | 55.0% | |
| !! | GGGAGTTCTGGTTCAAGCAG+AGG | + | chr5_1:58462062-58462081 | Msa0739880:CDS | 55.0% |
| ! | TCTGGTTCAAGCAGAGGTCG+TGG | + | chr5_1:58462068-58462087 | Msa0739880:CDS | 55.0% |
| ! | AGAAGGTGCAACTGGGCAGT+TGG | + | chr5_1:58462945-58462964 | Msa0739880:intron | 55.0% |
| GTGCCTTGAGAGAATCGGGA+AGG | - | chr5_1:58463308-58463327 | None:intergenic | 55.0% | |
| TGAGACCTGGGAAGATGGTC+AGG | + | chr5_1:58463753-58463772 | Msa0739880:CDS | 55.0% | |
| TAACGCCTGACCATCTTCCC+AGG | - | chr5_1:58463761-58463780 | None:intergenic | 55.0% | |
| AACCCCTCTTCCCCAAGTTC+AGG | - | chr5_1:58464527-58464546 | None:intergenic | 55.0% | |
| CTTGGGGAAGAGGGGTTAAG+TGG | + | chr5_1:58464530-58464549 | Msa0739880:intron | 55.0% | |
| !! | GGGTGATGGGATAGATGCAG+AGG | + | chr5_1:58464891-58464910 | Msa0739880:CDS | 55.0% |
| GATGGGATAGATGCAGAGGC+TGG | + | chr5_1:58464895-58464914 | Msa0739880:CDS | 55.0% | |
| AGATGCAGAGGCTGGATTGC+TGG | + | chr5_1:58464903-58464922 | Msa0739880:CDS | 55.0% | |
| GGACCGCTACGAACTAGAGA+AGG | + | chr5_1:58465074-58465093 | Msa0739880:CDS | 55.0% | |
| TGGAAAGGGAGGATTCAGCG+AGG | + | chr5_1:58465197-58465216 | Msa0739880:CDS | 55.0% | |
| GGAGAATGATGTGGGATCCC+AGG | + | chr5_1:58466179-58466198 | Msa0739880:intron | 55.0% | |
| TGATGTGGGATCCCAGGGTA+TGG | + | chr5_1:58466185-58466204 | Msa0739880:intron | 55.0% | |
| !! | CAGGTTGATGTCTGGTCTGC+TGG | + | chr5_1:58466612-58466631 | Msa0739880:intron | 55.0% |
| CTCTTCGGCAGACGTCCTTT+CGG | + | chr5_1:58466654-58466673 | Msa0739880:CDS | 55.0% | |
| CTCGAATATGCGGGTGGGGT+GGG | + | chr5_1:58459722-58459741 | Msa0739880:intron | 60.0% | |
| TCGAATATGCGGGTGGGGTG+GGG | + | chr5_1:58459723-58459742 | Msa0739880:intron | 60.0% | |
| GCTCGAATACGTAGTGCGGG+TGG | + | chr5_1:58460883-58460902 | Msa0739880:intron | 60.0% | |
| CGAATACGTAGTGCGGGTGG+GGG | + | chr5_1:58460886-58460905 | Msa0739880:intron | 60.0% | |
| GAATACGTAGTGCGGGTGGG+GGG | + | chr5_1:58460887-58460906 | Msa0739880:intron | 60.0% | |
| GGTCGTGGAAGAGGGAGTTC+TGG | + | chr5_1:58462050-58462069 | Msa0739880:CDS | 60.0% | |
| GAACTTACATCCCAGGGGGC+TGG | + | chr5_1:58466207-58466226 | Msa0739880:intron | 60.0% | |
| CCAATACGTTCCAGCCCCCT+GGG | - | chr5_1:58466220-58466239 | None:intergenic | 60.0% | |
| ACCAATACGTTCCAGCCCCC+TGG | - | chr5_1:58466221-58466240 | None:intergenic | 60.0% | |
| GCTCGAATATGCGGGTGGGG+TGG | + | chr5_1:58459721-58459740 | Msa0739880:intron | 65.0% | |
| CGAATATGCGGGTGGGGTGG+GGG | + | chr5_1:58459724-58459743 | Msa0739880:intron | 65.0% | |
| CCCAGGGGGCTGGAACGTAT+TGG | + | chr5_1:58466217-58466236 | Msa0739880:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 58458684 | 58467858 | 58458684 | ID=Msa0739880;Name=Msa0739880 |
| chr5_1 | mRNA | 58458684 | 58467858 | 58458684 | ID=Msa0739880-mRNA-1;Parent=Msa0739880;Name=Msa0739880-mRNA-1;_AED=0.10;_eAED=0.10;_QI=359|0.75|0.76|1|0.75|0.76|17|367|598 |
| chr5_1 | exon | 58458684 | 58459046 | 58458684 | ID=Msa0739880-mRNA-1:exon:16648;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58459188 | 58459426 | 58459188 | ID=Msa0739880-mRNA-1:exon:16649;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58461648 | 58461734 | 58461648 | ID=Msa0739880-mRNA-1:exon:16650;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58461981 | 58462166 | 58461981 | ID=Msa0739880-mRNA-1:exon:16651;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58462287 | 58462337 | 58462287 | ID=Msa0739880-mRNA-1:exon:16652;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58462548 | 58462655 | 58462548 | ID=Msa0739880-mRNA-1:exon:16653;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58463222 | 58463266 | 58463222 | ID=Msa0739880-mRNA-1:exon:16654;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58463540 | 58463652 | 58463540 | ID=Msa0739880-mRNA-1:exon:16655;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58463735 | 58463801 | 58463735 | ID=Msa0739880-mRNA-1:exon:16656;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58464418 | 58464484 | 58464418 | ID=Msa0739880-mRNA-1:exon:16657;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58464887 | 58464981 | 58464887 | ID=Msa0739880-mRNA-1:exon:16658;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58465048 | 58465218 | 58465048 | ID=Msa0739880-mRNA-1:exon:16659;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58465401 | 58465592 | 58465401 | ID=Msa0739880-mRNA-1:exon:16660;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58465974 | 58466032 | 58465974 | ID=Msa0739880-mRNA-1:exon:16661;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58466367 | 58466421 | 58466367 | ID=Msa0739880-mRNA-1:exon:16662;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58466615 | 58466776 | 58466615 | ID=Msa0739880-mRNA-1:exon:16663;Parent=Msa0739880-mRNA-1 |
| chr5_1 | exon | 58467396 | 58467858 | 58467396 | ID=Msa0739880-mRNA-1:exon:16664;Parent=Msa0739880-mRNA-1 |
| chr5_1 | five_prime_UTR | 58458684 | 58459042 | 58458684 | ID=Msa0739880-mRNA-1:five_prime_utr;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58459043 | 58459046 | 58459043 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58459188 | 58459426 | 58459188 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58461648 | 58461734 | 58461648 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58461981 | 58462166 | 58461981 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58462287 | 58462337 | 58462287 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58462548 | 58462655 | 58462548 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58463222 | 58463266 | 58463222 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58463540 | 58463652 | 58463540 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58463735 | 58463801 | 58463735 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58464418 | 58464484 | 58464418 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58464887 | 58464981 | 58464887 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58465048 | 58465218 | 58465048 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58465401 | 58465592 | 58465401 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58465974 | 58466032 | 58465974 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58466367 | 58466421 | 58466367 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58466615 | 58466776 | 58466615 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | CDS | 58467396 | 58467491 | 58467396 | ID=Msa0739880-mRNA-1:cds;Parent=Msa0739880-mRNA-1 |
| chr5_1 | three_prime_UTR | 58467492 | 58467858 | 58467492 | ID=Msa0739880-mRNA-1:three_prime_utr;Parent=Msa0739880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
