AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0739930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739930 MtrunA17_Chr5g0440001 77.778 441 65 3 1 409 231 670 0.0 685
Msa0739930 MtrunA17_Chr5g0440131 73.799 458 70 4 1 409 119 575 0.0 664
Msa0739930 MtrunA17_Chr5g0440171 73.756 442 82 4 1 409 164 604 0.0 645
Msa0739930 MtrunA17_Chr5g0440051 82.973 370 7 3 40 378 3 347 0.0 610
Msa0739930 MtrunA17_Chr5g0440181 88.580 324 5 2 86 378 4 326 0.0 577
Msa0739930 MtrunA17_Chr5g0440021 70.954 241 38 2 169 378 31 270 7.97e-118 344
Msa0739930 MtrunA17_Chr3g0093631 70.046 217 33 2 148 333 2 217 5.60e-105 309
Msa0739930 MtrunA17_Chr5g0440041 80.263 152 29 1 227 378 31 181 1.63e-84 256
Msa0739930 MtrunA17_Chr0c14g0493691 79.688 64 12 1 1 63 1 64 1.23e-25 99.0
Msa0739930 MtrunA17_Chr4g0038091 25.352 284 157 9 148 398 7 268 1.52e-19 91.3
Msa0739930 MtrunA17_Chr4g0038501 25.965 285 154 10 148 398 7 268 2.99e-19 90.5
Msa0739930 MtrunA17_Chr8g0343131 24.710 259 162 10 167 398 118 370 6.29e-18 84.7
Msa0739930 MtrunA17_Chr2g0334261 27.132 258 150 11 167 395 467 715 1.49e-17 85.1
Msa0739930 MtrunA17_Chr8g0341251 28.413 271 157 11 150 398 38 293 7.44e-17 81.3
Msa0739930 MtrunA17_Chr7g0256001 35.593 177 85 9 231 400 242 396 2.52e-16 80.9
Msa0739930 MtrunA17_Chr1g0150761 25.000 292 167 12 137 395 409 681 2.91e-16 80.9
Msa0739930 MtrunA17_Chr3g0140631 28.077 260 127 8 167 392 43 276 3.08e-16 79.0
Msa0739930 MtrunA17_Chr3g0127571 33.333 177 87 7 232 400 240 393 8.03e-16 79.3
Msa0739930 MtrunA17_Chr3g0125381 32.768 177 96 6 232 404 49 206 8.04e-16 76.3
Msa0739930 MtrunA17_Chr1g0205561 31.868 182 105 9 163 341 233 398 1.38e-15 78.6
Msa0739930 MtrunA17_Chr3g0139121 29.108 213 120 8 167 353 489 696 1.41e-15 79.0
Msa0739930 MtrunA17_Chr4g0070851 32.934 167 99 6 230 392 163 320 1.57e-15 77.4
Msa0739930 MtrunA17_Chr5g0405421 33.721 172 93 7 232 400 199 352 1.89e-15 78.2
Msa0739930 MtrunA17_Chr7g0271451 27.305 282 157 12 151 393 185 457 2.12e-15 77.8
Msa0739930 MtrunA17_Chr6g0474861 28.315 279 153 11 165 405 291 560 2.67e-15 77.8
Msa0739930 MtrunA17_Chr4g0008561 31.548 168 94 7 230 392 113 264 3.29e-15 77.8
Msa0739930 MtrunA17_Chr4g0063881 31.633 196 118 6 209 404 85 264 3.49e-15 77.0
Msa0739930 MtrunA17_Chr8g0389031 28.230 209 111 9 167 344 268 468 3.73e-15 77.4
Msa0739930 MtrunA17_Chr3g0099951 31.780 236 121 10 149 354 2 227 4.07e-15 76.6
Msa0739930 MtrunA17_Chr6g0474811 28.315 279 153 11 165 405 578 847 4.99e-15 77.4
Msa0739930 MtrunA17_Chr6g0475201 29.749 279 149 9 165 405 579 848 5.01e-15 77.4
Msa0739930 MtrunA17_Chr8g0351491 30.636 173 102 4 232 404 113 267 7.60e-15 74.3
Msa0739930 MtrunA17_Chr8g0389011 27.751 209 112 9 167 344 504 704 8.84e-15 76.6
Msa0739930 MtrunA17_Chr3g0133541 23.810 273 158 8 166 404 312 568 1.19e-14 75.9
Msa0739930 MtrunA17_Chr6g0475131 29.066 289 138 12 165 405 14 283 1.32e-14 74.3
Msa0739930 MtrunA17_Chr6g0474871 27.240 279 156 12 165 405 570 839 1.37e-14 75.9
Msa0739930 MtrunA17_Chr2g0284011 27.698 278 162 9 152 404 3 266 1.71e-14 75.1
Msa0739930 MtrunA17_Chr1g0157131 32.961 179 96 7 220 392 160 320 1.90e-14 75.1
Msa0739930 MtrunA17_Chr2g0329871 21.469 354 222 13 73 398 8 333 2.84e-14 73.6
Msa0739930 MtrunA17_Chr3g0096351 26.241 282 156 12 153 393 173 443 2.84e-14 74.3
Msa0739930 MtrunA17_Chr7g0248491 27.138 269 146 12 165 393 165 423 2.85e-14 74.3
Msa0739930 MtrunA17_Chr4g0069251 25.623 281 159 12 153 393 171 441 2.87e-14 74.3
Msa0739930 MtrunA17_Chr3g0084691 28.692 237 138 9 145 357 510 739 2.88e-14 74.7
Msa0739930 MtrunA17_Chr4g0013131 30.841 214 116 8 155 343 6 212 3.12e-14 74.3
Msa0739930 MtrunA17_Chr6g0474901 33.032 221 99 11 152 341 565 767 3.57e-14 74.7
Msa0739930 MtrunA17_Chr6g0456231 28.070 228 129 9 154 354 297 516 3.62e-14 74.3
Msa0739930 MtrunA17_Chr5g0443121 27.473 273 152 11 159 393 181 445 4.01e-14 73.9
Msa0739930 MtrunA17_Chr2g0333821 27.599 279 155 9 155 404 8 268 4.39e-14 73.6
Msa0739930 MtrunA17_Chr1g0196001 30.660 212 110 7 165 342 716 924 4.47e-14 74.3
Msa0739930 MtrunA17_Chr1g0196031 30.660 212 110 7 165 342 756 964 4.57e-14 74.3
Msa0739930 MtrunA17_Chr3g0114511 29.245 212 120 8 155 343 26 230 4.94e-14 73.6
Msa0739930 MtrunA17_Chr2g0286501 27.434 226 132 7 148 349 37 254 5.38e-14 74.3
Msa0739930 MtrunA17_Chr2g0302631 24.306 288 168 11 153 400 176 453 5.72e-14 73.6
Msa0739930 MtrunA17_Chr5g0428031 30.357 224 132 9 181 404 63 262 5.74e-14 73.2
Msa0739930 MtrunA17_Chr1g0180951 32.967 182 103 9 181 356 145 313 6.81e-14 73.2
Msa0739930 MtrunA17_Chr8g0347571 31.863 204 105 7 165 341 575 771 7.08e-14 73.6
Msa0739930 MtrunA17_Chr8g0347671 28.421 190 116 5 221 398 5 186 7.56e-14 70.5
Msa0739930 MtrunA17_Chr5g0408421 29.302 215 112 9 165 342 700 911 7.60e-14 73.6
Msa0739930 MtrunA17_Chr3g0132591 26.567 335 195 14 99 406 52 362 9.45e-14 72.8
Msa0739930 MtrunA17_Chr6g0475091 31.068 206 104 8 165 341 586 782 9.46e-14 73.2
Msa0739930 MtrunA17_Chr8g0353621 32.370 173 99 6 232 404 107 261 9.72e-14 71.2
Msa0739930 MtrunA17_Chr8g0346071 32.571 175 102 6 230 404 112 270 1.03e-13 72.4
Msa0739930 MtrunA17_Chr2g0299991 27.568 185 115 6 230 406 163 336 1.17e-13 72.0
Msa0739930 MtrunA17_Chr5g0439334 29.143 175 96 4 242 395 457 624 1.25e-13 72.8
Msa0739930 MtrunA17_Chr4g0034931 25.373 268 152 12 165 393 144 402 1.38e-13 72.0
Msa0739930 MtrunA17_Chr5g0424501 28.295 258 135 12 166 393 197 434 1.54e-13 72.0
Msa0739930 MtrunA17_Chr8g0379091 30.531 226 112 9 152 346 17 228 1.63e-13 72.0
Msa0739930 MtrunA17_Chr8g0341151 26.736 288 167 11 150 401 549 828 1.97e-13 72.4
Msa0739930 MtrunA17_Chr5g0408811 31.532 222 94 7 165 342 694 901 2.14e-13 72.4
Msa0739930 MtrunA17_Chr8g0340071 27.897 233 133 8 138 341 478 704 2.21e-13 72.0
Msa0739930 MtrunA17_Chr3g0132671 32.000 175 102 6 230 404 144 301 2.21e-13 71.6
Msa0739930 MtrunA17_Chr3g0107011 30.137 219 120 7 155 348 8 218 2.53e-13 71.2
Msa0739930 MtrunA17_Chr3g0115051 28.571 182 108 9 232 404 488 656 2.56e-13 72.0
Msa0739930 MtrunA17_Chr1g0205421 26.715 277 164 11 153 404 4 266 2.78e-13 71.2
Msa0739930 MtrunA17_Chr5g0424531 26.728 217 134 6 196 404 70 269 3.20e-13 69.7
Msa0739930 MtrunA17_Chr7g0252301 27.237 257 136 11 110 341 823 1053 3.43e-13 71.6
Msa0739930 MtrunA17_Chr8g0340051 25.524 286 170 10 151 399 19 298 3.56e-13 70.5
Msa0739930 MtrunA17_Chr6g0485761 29.048 210 115 7 165 348 299 500 3.72e-13 71.2
Msa0739930 MtrunA17_Chr7g0272841 25.830 271 159 7 166 405 73 332 3.89e-13 71.2
Msa0739930 MtrunA17_Chr6g0483731 29.388 245 106 11 144 347 57 275 4.09e-13 70.5
Msa0739930 MtrunA17_Chr7g0220741 27.586 232 133 9 150 354 295 518 4.13e-13 71.2
Msa0739930 MtrunA17_Chr8g0347661 25.347 288 157 9 151 395 562 834 4.49e-13 71.2
Msa0739930 MtrunA17_Chr3g0093641 72.093 43 11 1 336 378 1 42 4.55e-13 64.3
Msa0739930 MtrunA17_Chr7g0276111 30.814 172 98 6 232 400 246 399 5.04e-13 70.9
Msa0739930 MtrunA17_Chr1g0196011 29.098 244 131 9 138 342 516 756 5.63e-13 70.9
Msa0739930 MtrunA17_Chr4g0059751 29.878 164 97 6 229 392 190 335 7.01e-13 69.7
Msa0739930 MtrunA17_Chr1g0188031 30.660 212 112 8 160 343 19 223 7.67e-13 69.7
Msa0739930 MtrunA17_Chr6g0475111 30.097 206 106 9 165 341 592 788 8.63e-13 70.5
Msa0739930 MtrunA17_Chr7g0274941 23.828 256 150 9 167 392 22 262 9.52e-13 68.6
Msa0739930 MtrunA17_Chr4g0061201 29.612 206 105 9 166 341 813 1008 9.67e-13 70.1
Msa0739930 MtrunA17_Chr5g0424581 31.818 154 87 6 241 393 231 367 9.88e-13 69.3
Msa0739930 MtrunA17_Chr8g0340891 25.795 283 164 10 150 395 554 827 1.00e-12 70.1
Msa0739930 MtrunA17_Chr0c02g0489761 33.129 163 78 7 238 392 185 324 1.01e-12 69.7
Msa0739930 MtrunA17_Chr1g0206231 28.899 218 123 6 150 341 336 547 1.10e-12 69.7
Msa0739930 MtrunA17_Chr2g0323231 28.364 275 156 11 110 350 121 388 1.30e-12 69.3
Msa0739930 MtrunA17_Chr8g0348451 25.843 267 152 12 165 393 148 406 1.33e-12 69.3
Msa0739930 MtrunA17_Chr8g0341101 26.644 289 166 10 144 395 600 879 1.34e-12 69.7
Msa0739930 MtrunA17_Chr3g0119041 28.111 217 124 7 151 341 331 541 1.36e-12 69.3
Msa0739930 MtrunA17_Chr1g0148501 27.602 221 109 9 166 351 435 639 1.42e-12 69.7
Msa0739930 MtrunA17_Chr3g0136131 27.679 224 142 8 184 400 143 353 1.63e-12 68.6
Msa0739930 MtrunA17_Chr6g0487231 30.114 176 100 6 237 404 169 329 1.65e-12 68.2
Msa0739930 MtrunA17_Chr8g0340931 26.241 282 163 9 150 395 556 828 1.83e-12 69.3
Msa0739930 MtrunA17_Chr1g0206261 29.808 208 103 9 165 341 94 289 1.87e-12 68.6
Msa0739930 MtrunA17_Chr5g0424651 31.818 154 87 6 241 393 427 563 1.99e-12 68.9
Msa0739930 MtrunA17_Chr8g0341111 26.596 282 161 13 151 395 470 742 2.17e-12 68.9
Msa0739930 MtrunA17_Chr5g0423891 29.130 230 127 10 139 340 141 362 2.17e-12 68.6
Msa0739930 MtrunA17_Chr3g0107051 30.636 173 106 6 232 404 117 275 2.37e-12 68.2
Msa0739930 MtrunA17_Chr3g0091461 31.068 206 102 9 166 341 809 1004 2.57e-12 68.9
Msa0739930 MtrunA17_Chr1g0165181 27.138 269 147 12 165 393 17 276 2.87e-12 67.0
Msa0739930 MtrunA17_Chr6g0488761 28.780 205 113 10 167 344 492 690 3.12e-12 68.6
Msa0739930 MtrunA17_Chr0c03g0490031 26.872 227 131 8 151 350 291 509 3.20e-12 68.2
Msa0739930 MtrunA17_Chr4g0069301 28.061 196 127 6 209 404 100 281 3.66e-12 67.8
Msa0739930 MtrunA17_Chr6g0485721 30.542 203 105 9 165 340 102 295 3.78e-12 67.8
Msa0739930 MtrunA17_Chr3g0119241 29.493 217 112 10 145 337 313 512 4.00e-12 68.2
Msa0739930 MtrunA17_Chr5g0408571 37.383 107 62 3 238 342 305 408 4.00e-12 67.8
Msa0739930 MtrunA17_Chr2g0318171 28.505 214 120 7 167 354 487 693 4.33e-12 68.2
Msa0739930 MtrunA17_Chr3g0078551 28.019 207 116 7 165 344 528 728 4.45e-12 68.2
Msa0739930 MtrunA17_Chr5g0419221 27.027 222 108 7 165 342 718 929 4.87e-12 68.2
Msa0739930 MtrunA17_Chr6g0467711 26.199 271 153 10 163 395 403 664 4.90e-12 67.8
Msa0739930 MtrunA17_Chr8g0340081 24.825 286 174 8 150 399 496 776 5.00e-12 67.8
Msa0739930 MtrunA17_Chr7g0219681 27.778 216 118 9 166 352 529 735 5.13e-12 67.8
Msa0739930 MtrunA17_Chr3g0123891 27.119 236 133 8 154 358 279 506 5.15e-12 67.8
Msa0739930 MtrunA17_Chr2g0284031 30.493 223 110 9 156 347 26 234 5.27e-12 67.4
Msa0739930 MtrunA17_Chr6g0472051 36.449 107 63 3 238 342 31 134 5.30e-12 64.7
Msa0739930 MtrunA17_Chr1g0202831 31.410 156 90 8 241 395 519 658 5.35e-12 67.8
Msa0739930 MtrunA17_Chr5g0432871 29.365 252 129 11 167 385 622 857 6.28e-12 67.8
Msa0739930 MtrunA17_Chr1g0165141 28.986 207 109 8 166 342 859 1057 6.57e-12 67.8
Msa0739930 MtrunA17_Chr5g0408621 27.778 216 114 6 165 342 753 964 7.43e-12 67.4
Msa0739930 MtrunA17_Chr5g0408741 29.911 224 99 7 165 342 623 834 8.27e-12 67.4
Msa0739930 MtrunA17_Chr8g0340871 25.704 284 162 11 150 395 565 837 9.02e-12 67.0
Msa0739930 MtrunA17_Chr5g0408821 33.333 120 74 4 226 342 207 323 1.06e-11 66.2
Msa0739930 MtrunA17_Chr6g0464171 36.449 107 63 3 238 342 827 930 1.12e-11 67.0
Msa0739930 MtrunA17_Chr5g0439561 27.309 249 138 11 145 366 331 563 1.13e-11 66.6
Msa0739930 MtrunA17_Chr0c01g0489481 27.619 210 118 9 164 347 334 535 1.21e-11 66.6
Msa0739930 MtrunA17_Chr7g0259211 26.697 221 123 8 165 354 289 501 1.21e-11 66.6
Msa0739930 MtrunA17_Chr5g0432491 28.467 274 156 10 157 404 19 278 1.33e-11 65.9
Msa0739930 MtrunA17_Chr8g0341051 30.128 156 92 6 250 395 48 196 1.43e-11 64.3
Msa0739930 MtrunA17_Chr2g0314611 28.899 218 122 8 163 354 487 697 1.51e-11 66.2
Msa0739930 MtrunA17_Chr1g0165191 26.573 286 153 15 166 404 882 1157 1.56e-11 66.6
Msa0739930 MtrunA17_Chr6g0474831 37.864 103 53 4 242 341 163 257 1.64e-11 64.7
Msa0739930 MtrunA17_Chr5g0441691 34.507 142 73 8 256 392 188 314 1.80e-11 65.9
Msa0739930 MtrunA17_Chr4g0045841 27.149 221 119 10 167 356 61 270 1.89e-11 65.1
Msa0739930 MtrunA17_Chr7g0267771 32.857 140 78 4 256 392 208 334 1.96e-11 65.5
Msa0739930 MtrunA17_Chr6g0464211 27.907 215 115 8 165 342 718 929 2.08e-11 65.9
Msa0739930 MtrunA17_Chr8g0340911 26.267 217 128 7 150 341 556 765 2.17e-11 65.9
Msa0739930 MtrunA17_Chr8g0367071 34.167 120 71 3 238 356 457 569 2.19e-11 65.9
Msa0739930 MtrunA17_Chr7g0221191 27.143 210 117 8 165 347 399 599 2.25e-11 65.9
Msa0739930 MtrunA17_Chr1g0158411 27.111 225 125 6 167 361 411 626 2.31e-11 65.9
Msa0739930 MtrunA17_Chr8g0340091 25.461 271 161 9 127 361 496 761 2.35e-11 65.9
Msa0739930 MtrunA17_Chr2g0283111 29.714 175 105 6 238 401 712 879 2.45e-11 65.9
Msa0739930 MtrunA17_Chr3g0088321 26.394 269 151 10 163 393 55 314 2.50e-11 64.7
Msa0739930 MtrunA17_Chr4g0048681 27.861 201 113 7 165 341 289 481 2.55e-11 65.5
Msa0739930 MtrunA17_Chr2g0293491 26.104 249 136 9 167 382 10 243 2.62e-11 63.9
Msa0739930 MtrunA17_Chr6g0483151 27.425 299 148 14 160 405 13 295 2.80e-11 64.7
Msa0739930 MtrunA17_Chr3g0078531 29.469 207 113 7 165 344 531 731 2.87e-11 65.5
Msa0739930 MtrunA17_Chr8g0341221 30.481 187 95 7 151 309 28 207 3.07e-11 62.8
Msa0739930 MtrunA17_Chr5g0394001 27.876 226 132 6 142 341 311 531 3.19e-11 65.1
Msa0739930 MtrunA17_Chr8g0340971 29.348 184 103 5 150 309 79 259 3.69e-11 63.5
Msa0739930 MtrunA17_Chr1g0157911 26.172 256 140 8 146 361 374 620 3.86e-11 65.1
Msa0739930 MtrunA17_Chr1g0176421 35.915 142 71 7 256 392 281 407 4.14e-11 64.7
Msa0739930 MtrunA17_Chr6g0484031 28.638 213 128 9 167 365 229 431 4.17e-11 64.7
Msa0739930 MtrunA17_Chr5g0436871 36.082 97 57 2 256 350 38 131 4.19e-11 62.4
Msa0739930 MtrunA17_Chr1g0165971 27.941 272 145 14 166 395 787 1049 4.20e-11 65.1
Msa0739930 MtrunA17_Chr5g0409241 28.241 216 109 7 165 342 399 606 4.21e-11 64.7
Msa0739930 MtrunA17_Chr1g0165891 30.435 207 105 11 166 342 402 599 4.29e-11 64.7
Msa0739930 MtrunA17_Chr2g0280781 26.136 264 149 10 129 358 477 728 4.34e-11 65.1
Msa0739930 MtrunA17_Chr5g0409041 34.906 106 61 3 238 342 406 504 4.35e-11 64.7
Msa0739930 MtrunA17_Chr8g0340881 26.829 287 168 11 150 401 560 839 4.68e-11 64.7
Msa0739930 MtrunA17_Chr2g0320111 27.962 211 112 7 165 342 96 299 4.80e-11 63.9
Msa0739930 MtrunA17_Chr3g0108361 29.940 167 103 5 244 401 729 890 4.90e-11 64.7
Msa0739930 MtrunA17_Chr5g0408581 27.189 217 114 6 165 342 719 930 4.92e-11 64.7
Msa0739930 MtrunA17_Chr8g0377951 24.453 274 156 11 165 395 573 838 5.06e-11 64.7
Msa0739930 MtrunA17_Chr8g0358781 26.961 204 110 8 165 340 349 541 5.08e-11 64.7
Msa0739930 MtrunA17_Chr3g0106121 31.658 199 106 8 167 342 521 712 5.12e-11 64.7
Msa0739930 MtrunA17_Chr8g0376131 28.155 206 106 9 167 341 58 252 5.12e-11 63.9
Msa0739930 MtrunA17_Chr5g0439571 25.000 244 152 8 130 349 297 533 5.20e-11 64.7
Msa0739930 MtrunA17_Chr1g0206421 29.612 206 107 8 165 341 233 429 5.62e-11 64.3
Msa0739930 MtrunA17_Chr5g0436861 34.259 108 65 3 238 342 817 921 5.69e-11 64.7
Msa0739930 MtrunA17_Chr2g0280711 25.475 263 161 9 109 344 480 734 5.78e-11 64.7
Msa0739930 MtrunA17_Chr8g0354421 30.693 202 106 8 167 341 370 564 6.15e-11 64.3
Msa0739930 MtrunA17_Chr5g0403891 36.000 100 56 3 244 342 363 455 6.23e-11 64.3
Msa0739930 MtrunA17_Chr3g0137191 27.941 204 112 7 165 342 70 264 7.30e-11 63.2
Msa0739930 MtrunA17_Chr1g0149381 26.957 230 134 7 150 354 493 713 7.37e-11 64.3
Msa0739930 MtrunA17_Chr3g0119351 35.185 108 65 3 242 347 478 582 7.39e-11 63.9
Msa0739930 MtrunA17_Chr7g0236341 26.557 305 148 12 65 341 463 719 7.52e-11 64.3
Msa0739930 MtrunA17_Chr8g0341131 30.460 174 94 8 151 310 8 168 7.58e-11 60.5
Msa0739930 MtrunA17_Chr8g0341011 25.688 218 129 8 150 341 559 769 7.59e-11 64.3
Msa0739930 MtrunA17_Chr3g0106141 30.964 197 106 8 167 340 521 710 7.74e-11 64.3
Msa0739930 MtrunA17_Chr4g0070941 27.619 210 111 10 166 344 413 612 7.80e-11 63.9
Msa0739930 MtrunA17_Chr3g0078541 28.986 207 114 7 165 344 534 734 7.84e-11 64.3
Msa0739930 MtrunA17_Chr1g0158711 25.974 154 102 4 255 400 381 530 7.86e-11 63.9
Msa0739930 MtrunA17_Chr2g0291501 29.762 168 90 6 244 395 746 901 7.95e-11 64.3
Msa0739930 MtrunA17_Chr4g0023111 29.612 206 112 9 165 344 720 918 8.64e-11 63.9
Msa0739930 MtrunA17_Chr5g0408431 28.767 219 114 9 165 345 717 931 8.87e-11 63.9
Msa0739930 MtrunA17_Chr4g0060011 30.645 124 78 3 220 342 399 515 9.26e-11 63.5
Msa0739930 MtrunA17_Chr5g0439631 28.704 216 112 10 146 337 314 511 9.41e-11 63.5
Msa0739930 MtrunA17_Chr8g0385051 25.373 268 148 11 165 399 277 525 9.45e-11 63.5
Msa0739930 MtrunA17_Chr6g0453671 28.000 200 127 4 209 408 93 275 9.77e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739930 AT5G20930.1 63.348 442 127 5 2 409 248 688 0.0 568
Msa0739930 AT3G13530.1 26.882 279 159 10 148 398 7 268 7.78e-21 95.9
Msa0739930 AT4G36070.1 35.260 173 89 8 232 400 171 324 2.02e-16 81.6
Msa0739930 AT4G36070.2 35.260 173 89 8 232 400 171 324 2.83e-16 81.3
Msa0739930 AT3G20200.1 28.395 243 132 8 139 344 419 656 3.01e-16 81.3
Msa0739930 AT3G20200.3 28.395 243 132 8 139 344 419 656 3.19e-16 81.3
Msa0739930 AT3G20200.2 28.395 243 132 8 139 344 419 656 3.97e-16 80.9
Msa0739930 AT3G20200.4 28.395 243 132 8 139 344 419 656 3.97e-16 80.9
Msa0739930 AT2G17890.1 33.721 172 93 8 232 400 208 361 8.87e-16 79.7
Msa0739930 AT4G29810.1 28.090 178 115 5 230 404 163 330 1.17e-15 78.2
Msa0739930 AT4G29810.3 29.518 166 104 5 230 392 172 327 1.17e-15 78.2
Msa0739930 AT4G29810.2 28.090 178 115 5 230 404 172 339 1.44e-15 78.2
Msa0739930 AT3G19100.1 33.939 165 89 7 232 392 246 394 1.96e-15 78.6
Msa0739930 AT5G45820.1 27.758 281 156 9 153 404 4 266 3.48e-15 77.4
Msa0739930 AT2G25880.1 30.811 185 104 5 211 392 101 264 4.20e-15 75.9
Msa0739930 AT4G26890.1 29.947 187 98 6 230 409 98 258 4.25e-15 77.0
Msa0739930 AT2G25880.4 30.811 185 104 5 211 392 114 277 5.72e-15 75.5
Msa0739930 AT5G10930.1 28.674 279 153 11 155 404 6 267 5.91e-15 76.6
Msa0739930 AT1G66750.1 30.455 220 108 7 160 349 12 216 8.49e-15 75.5
Msa0739930 AT2G46700.2 32.121 165 94 5 231 392 63 212 9.52e-15 75.9
Msa0739930 AT2G46700.3 32.121 165 94 5 231 392 63 212 9.52e-15 75.9
Msa0739930 AT5G16000.1 30.275 218 119 8 151 343 302 511 9.71e-15 76.6
Msa0739930 AT4G04740.2 34.459 148 78 5 256 400 189 320 1.21e-14 76.3
Msa0739930 AT2G46700.1 32.121 165 94 5 231 392 244 393 1.47e-14 75.9
Msa0739930 AT4G04740.4 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT4G04740.6 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT4G04740.5 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT4G04740.3 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT4G04740.1 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT4G04740.7 34.459 148 78 5 256 400 189 320 1.66e-14 75.5
Msa0739930 AT3G50530.1 32.370 173 94 8 232 400 250 403 1.80e-14 75.9
Msa0739930 AT2G25880.3 30.481 187 106 5 209 392 160 325 2.02e-14 74.3
Msa0739930 AT5G25110.1 28.986 276 157 11 154 404 36 297 2.30e-14 75.1
Msa0739930 AT3G20410.2 34.416 154 81 7 256 404 211 349 2.43e-14 75.1
Msa0739930 AT3G20410.1 34.416 154 81 7 256 404 211 349 2.43e-14 75.1
Msa0739930 AT3G59110.1 25.887 282 161 12 151 393 180 452 2.93e-14 74.7
Msa0739930 AT1G50700.3 33.766 154 82 6 256 404 193 331 3.45e-14 74.7
Msa0739930 AT2G41140.1 33.140 172 94 6 232 400 225 378 3.50e-14 74.7
Msa0739930 AT1G50700.1 33.766 154 82 6 256 404 193 331 3.70e-14 74.7
Msa0739930 AT1G09440.1 29.362 235 128 10 151 356 147 372 3.94e-14 74.3
Msa0739930 AT1G09440.2 29.362 235 128 10 151 356 147 372 3.94e-14 74.3
Msa0739930 AT1G14000.1 29.756 205 123 8 199 398 228 416 4.14e-14 73.9
Msa0739930 AT1G50700.2 33.766 154 82 6 256 404 193 331 4.27e-14 74.3
Msa0739930 AT5G35380.1 28.293 205 114 9 167 344 420 618 4.33e-14 74.7
Msa0739930 AT1G54960.1 24.820 278 160 9 166 409 73 335 5.67e-14 74.3
Msa0739930 AT1G54960.2 24.820 278 160 9 166 409 73 335 5.67e-14 74.3
Msa0739930 AT1G78940.3 26.275 255 143 11 128 344 404 651 6.21e-14 74.3
Msa0739930 AT1G78940.1 26.275 255 143 11 128 344 333 580 7.28e-14 73.9
Msa0739930 AT1G78940.2 26.275 255 143 11 128 344 404 651 7.50e-14 73.9
Msa0739930 AT1G49580.1 33.333 165 90 7 232 392 252 400 8.07e-14 73.6
Msa0739930 AT5G61550.3 30.500 200 108 8 167 340 496 690 1.05e-13 73.6
Msa0739930 AT5G61550.1 30.500 200 108 8 167 340 496 690 1.05e-13 73.6
Msa0739930 AT5G61550.4 30.500 200 108 8 167 340 496 690 1.05e-13 73.6
Msa0739930 AT2G42960.3 26.809 235 134 10 151 356 173 398 1.09e-13 73.2
Msa0739930 AT2G42960.5 26.809 235 134 10 151 356 173 398 1.09e-13 73.2
Msa0739930 AT2G42960.4 26.809 235 134 10 151 356 173 398 1.09e-13 73.2
Msa0739930 AT2G42960.1 26.809 235 134 10 151 356 173 398 1.09e-13 73.2
Msa0739930 AT4G21940.3 35.915 142 71 6 256 392 222 348 1.22e-13 72.8
Msa0739930 AT5G61550.2 30.500 200 108 8 167 340 496 690 1.23e-13 73.6
Msa0739930 AT4G21940.1 35.915 142 71 6 256 392 222 348 1.29e-13 72.8
Msa0739930 AT4G21940.2 35.915 142 71 6 256 392 222 348 1.45e-13 72.8
Msa0739930 AT3G56760.1 33.140 172 94 6 232 400 226 379 1.59e-13 72.8
Msa0739930 AT1G01540.2 25.746 268 151 10 165 393 158 416 2.02e-13 72.0
Msa0739930 AT5G65240.2 28.444 225 122 8 165 358 288 504 2.08e-13 72.4
Msa0739930 AT5G65240.1 27.542 236 132 8 154 358 277 504 2.10e-13 72.4
Msa0739930 AT1G16760.2 22.874 341 204 12 55 344 321 653 2.12e-13 72.4
Msa0739930 AT2G30360.1 27.431 288 162 9 148 405 8 278 2.17e-13 72.0
Msa0739930 AT4G26070.5 30.539 167 101 6 230 392 148 303 2.30e-13 71.2
Msa0739930 AT1G16760.1 22.874 341 204 12 55 344 321 653 2.35e-13 72.4
Msa0739930 AT4G02630.1 27.803 223 120 9 165 356 166 378 2.35e-13 72.0
Msa0739930 AT4G26070.4 30.539 167 101 6 230 392 160 315 2.41e-13 71.2
Msa0739930 AT4G26070.2 30.539 167 101 6 230 392 161 316 2.60e-13 71.2
Msa0739930 AT4G26070.3 30.539 167 101 6 230 392 161 316 2.60e-13 71.2
Msa0739930 AT4G24400.2 28.571 196 124 5 209 404 83 262 2.77e-13 71.6
Msa0739930 AT2G45490.1 30.726 179 100 6 230 405 117 274 2.90e-13 70.5
Msa0739930 AT3G23000.1 25.632 277 164 8 155 404 19 280 3.31e-13 71.2
Msa0739930 AT4G24400.1 28.571 196 124 5 209 404 83 262 3.39e-13 71.2
Msa0739930 AT1G48490.4 32.787 183 94 6 230 392 924 1097 3.49e-13 72.0
Msa0739930 AT1G48490.3 32.787 183 94 6 230 392 923 1096 3.56e-13 72.0
Msa0739930 AT1G48490.2 32.787 183 94 6 230 392 923 1096 3.56e-13 72.0
Msa0739930 AT1G48490.1 32.787 183 94 6 230 392 923 1096 3.56e-13 72.0
Msa0739930 AT1G70130.1 28.111 217 123 8 166 356 339 548 4.01e-13 71.6
Msa0739930 AT1G16150.1 27.899 276 144 12 166 399 429 691 5.98e-13 71.2
Msa0739930 AT4G01330.2 26.022 269 149 11 165 393 166 424 6.24e-13 70.5
Msa0739930 AT4G01330.1 26.022 269 149 11 165 393 166 424 6.46e-13 70.5
Msa0739930 AT1G18040.1 28.475 295 150 14 160 405 11 293 7.25e-13 70.1
Msa0739930 AT1G52290.1 29.524 210 112 9 165 347 147 347 7.37e-13 70.5
Msa0739930 AT4G01330.3 26.022 269 149 11 165 393 166 424 7.49e-13 70.5
Msa0739930 AT5G61560.2 24.079 407 219 18 47 395 316 690 8.18e-13 70.9
Msa0739930 AT1G70110.1 26.724 232 137 7 151 356 334 558 8.39e-13 70.5
Msa0739930 AT1G56720.3 26.408 284 157 12 151 393 169 441 8.84e-13 70.1
Msa0739930 AT1G56720.1 26.408 284 157 12 151 393 169 441 8.84e-13 70.1
Msa0739930 AT1G56720.2 26.408 284 157 12 151 393 169 441 8.84e-13 70.1
Msa0739930 AT1G56720.4 26.408 284 157 12 151 393 169 441 8.84e-13 70.1
Msa0739930 AT5G61560.4 24.079 407 219 18 47 395 337 711 8.88e-13 70.5
Msa0739930 AT5G61560.3 24.079 407 219 18 47 395 337 711 8.88e-13 70.5
Msa0739930 AT5G61560.5 24.079 407 219 18 47 395 318 692 9.03e-13 70.5
Msa0739930 AT5G61560.1 24.079 407 219 18 47 395 318 692 9.03e-13 70.5
Msa0739930 AT3G58690.1 30.000 210 107 9 165 342 91 292 1.01e-12 69.7
Msa0739930 AT3G17420.1 26.316 209 126 8 206 400 229 423 1.01e-12 70.1
Msa0739930 AT1G01540.1 27.189 217 120 8 165 352 158 365 1.07e-12 69.7
Msa0739930 AT5G57035.1 25.368 272 144 12 166 397 430 682 1.11e-12 70.5
Msa0739930 AT1G79670.1 28.364 275 136 12 166 395 426 684 1.21e-12 70.1
Msa0739930 AT3G53930.2 29.944 177 100 8 221 392 108 265 1.26e-12 70.1
Msa0739930 AT3G53930.1 29.944 177 100 8 221 392 108 265 1.29e-12 70.1
Msa0739930 AT4G30960.1 30.876 217 118 7 156 347 19 228 1.31e-12 69.7
Msa0739930 AT1G79670.2 28.364 275 136 12 166 395 389 647 1.35e-12 70.1
Msa0739930 AT1G52290.2 29.048 210 113 9 165 347 147 347 1.89e-12 68.9
Msa0739930 AT1G16130.1 27.817 284 134 11 166 399 421 683 1.93e-12 69.7
Msa0739930 AT3G10540.1 31.351 185 96 8 230 402 140 305 2.02e-12 68.9
Msa0739930 AT1G69270.1 30.000 170 97 7 238 393 362 523 2.17e-12 68.9
Msa0739930 AT4G18700.1 30.137 219 108 8 160 347 25 229 2.22e-12 68.9
Msa0739930 AT4G23650.1 32.086 187 100 10 220 400 164 329 2.37e-12 68.9
Msa0739930 AT2G18170.1 27.727 220 112 11 157 343 28 233 2.38e-12 68.2
Msa0739930 AT1G70460.1 31.604 212 107 11 165 349 357 557 3.38e-12 68.9
Msa0739930 AT3G08730.1 34.677 124 68 4 232 353 231 343 3.98e-12 68.2
Msa0739930 AT3G08730.2 34.677 124 68 4 232 353 231 343 3.98e-12 68.2
Msa0739930 AT5G45810.1 29.508 244 126 10 136 348 4 232 4.29e-12 68.2
Msa0739930 AT5G04510.1 31.250 176 90 8 230 393 139 295 4.32e-12 68.2
Msa0739930 AT5G04510.2 30.814 172 96 7 230 393 139 295 4.67e-12 67.8
Msa0739930 AT5G18500.2 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT5G18500.5 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT5G18500.4 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT5G18500.1 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT5G18500.3 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT5G18500.6 27.039 233 132 9 153 356 158 381 4.92e-12 67.8
Msa0739930 AT3G08720.1 34.677 124 68 4 232 353 237 349 5.00e-12 67.8
Msa0739930 AT3G08720.3 34.677 124 68 4 232 353 237 349 5.00e-12 67.8
Msa0739930 AT3G08720.4 34.677 124 68 4 232 353 237 349 5.00e-12 67.8
Msa0739930 AT3G08720.2 34.677 124 68 4 232 353 237 349 5.00e-12 67.8
Msa0739930 AT1G76040.2 28.641 206 123 7 209 408 187 374 5.01e-12 68.2
Msa0739930 AT1G76040.3 28.641 206 123 7 209 408 187 374 5.08e-12 67.8
Msa0739930 AT5G37450.4 37.273 110 64 3 244 351 535 641 5.09e-12 68.2
Msa0739930 AT5G37450.1 37.273 110 64 3 244 351 714 820 5.22e-12 68.2
Msa0739930 AT5G37450.3 37.273 110 64 3 244 351 738 844 5.26e-12 68.2
Msa0739930 AT4G26070.1 34.783 115 64 4 230 343 161 265 5.27e-12 66.6
Msa0739930 AT5G37450.2 37.273 110 64 3 244 351 762 868 5.40e-12 68.2
Msa0739930 AT3G10660.2 32.857 140 78 4 256 392 306 432 5.55e-12 68.2
Msa0739930 AT3G10660.1 32.857 140 78 4 256 392 306 432 5.55e-12 68.2
Msa0739930 AT4G34500.1 26.522 230 127 9 150 347 134 353 6.07e-12 67.4
Msa0739930 AT1G24030.3 23.929 280 163 11 165 401 12 284 7.08e-12 66.2
Msa0739930 AT3G24550.1 28.431 204 112 6 165 342 284 479 8.39e-12 67.4
Msa0739930 AT4G23200.1 25.175 286 169 12 151 398 326 604 8.59e-12 67.4
Msa0739930 AT3G25560.2 27.586 232 133 9 150 354 302 525 9.36e-12 67.4
Msa0739930 AT3G25560.3 27.586 232 133 9 150 354 301 524 9.37e-12 67.4
Msa0739930 AT4G00960.2 31.967 122 78 3 238 358 64 181 9.52e-12 65.9
Msa0739930 AT3G25560.1 27.586 232 133 9 150 354 301 524 9.61e-12 67.4
Msa0739930 AT2G38620.4 25.098 255 141 8 160 392 3 229 9.78e-12 65.1
Msa0739930 AT3G18810.1 37.000 100 55 3 244 342 444 536 9.78e-12 67.4
Msa0739930 AT4G00960.3 31.967 122 78 3 238 358 71 188 9.88e-12 65.9
Msa0739930 AT4G08500.1 29.870 154 91 5 241 393 439 576 9.95e-12 67.0
Msa0739930 AT1G29230.1 29.091 220 112 8 155 343 68 274 9.96e-12 67.0
Msa0739930 AT1G63700.1 28.161 174 108 8 232 404 499 656 1.00e-11 67.4
Msa0739930 AT1G63700.2 28.161 174 108 8 232 404 499 656 1.00e-11 67.4
Msa0739930 AT4G00960.4 39.560 91 50 3 242 331 162 248 1.06e-11 65.5
Msa0739930 AT3G53380.1 37.398 123 69 3 230 351 469 584 1.08e-11 67.0
Msa0739930 AT4G00960.1 31.967 122 78 3 238 358 158 275 1.11e-11 66.2
Msa0739930 AT1G59580.2 27.064 218 114 11 157 342 28 232 1.13e-11 66.2
Msa0739930 AT1G59580.1 27.064 218 114 11 157 342 28 232 1.13e-11 66.2
Msa0739930 AT1G56130.3 25.764 229 129 9 165 364 499 715 1.15e-11 67.0
Msa0739930 AT1G10210.2 26.337 243 131 12 136 343 4 233 1.22e-11 66.2
Msa0739930 AT1G10210.3 26.337 243 131 12 136 343 4 233 1.22e-11 66.2
Msa0739930 AT1G10210.1 26.337 243 131 12 136 343 4 233 1.22e-11 66.2
Msa0739930 AT1G56130.1 25.764 229 129 9 165 364 550 766 1.24e-11 67.0
Msa0739930 AT5G23580.1 32.484 157 88 5 241 392 125 268 1.28e-11 66.6
Msa0739930 AT5G49780.1 40.000 100 53 3 244 342 641 734 1.46e-11 67.0
Msa0739930 AT1G72760.1 25.228 329 186 17 56 344 278 586 1.51e-11 66.6
Msa0739930 AT3G59790.1 28.962 183 109 8 206 386 138 301 1.56e-11 65.9
Msa0739930 AT3G24540.1 28.910 211 102 7 165 342 187 382 1.84e-11 66.2
Msa0739930 AT1G24030.2 23.929 280 163 11 165 401 66 338 1.89e-11 65.5
Msa0739930 AT1G72760.2 25.228 329 186 17 56 344 287 595 1.90e-11 66.2
Msa0739930 AT1G56130.2 25.764 229 129 9 165 364 698 914 1.95e-11 66.6
Msa0739930 AT2G38910.1 35.714 140 74 5 256 392 254 380 1.99e-11 66.2
Msa0739930 AT5G62310.1 31.088 193 90 10 230 392 849 1028 2.00e-11 66.6
Msa0739930 AT5G49780.2 40.000 100 53 3 244 342 762 855 2.10e-11 66.6
Msa0739930 AT5G49780.3 40.000 100 53 3 244 342 740 833 2.10e-11 66.6
Msa0739930 AT5G51270.2 28.155 206 115 9 167 344 452 652 2.17e-11 66.2
Msa0739930 AT5G51270.1 28.155 206 115 9 167 344 452 652 2.17e-11 66.2
Msa0739930 AT1G24030.1 23.929 280 163 11 165 401 80 352 2.23e-11 65.5
Msa0739930 AT5G49760.1 40.000 100 53 3 244 342 738 831 2.98e-11 65.9
Msa0739930 AT3G59410.4 26.257 179 99 8 241 403 570 731 3.02e-11 65.9
Msa0739930 AT3G59410.1 26.257 179 99 8 241 403 569 730 3.07e-11 65.9
Msa0739930 AT3G59410.3 26.257 179 99 8 241 403 569 730 3.07e-11 65.9
Msa0739930 AT2G38490.1 30.180 222 113 8 152 343 19 228 3.57e-11 65.1
Msa0739930 AT3G59410.2 26.257 179 99 8 241 403 593 754 3.68e-11 65.9
Msa0739930 AT1G60800.2 27.149 221 122 9 165 354 238 450 3.81e-11 65.5
Msa0739930 AT1G11303.1 27.523 218 121 9 154 341 499 709 4.09e-11 65.5
Msa0739930 AT3G59410.5 26.257 179 99 8 241 403 569 730 4.46e-11 65.5
Msa0739930 AT1G05100.1 30.488 164 95 7 233 392 103 251 5.53e-11 63.9
Msa0739930 AT1G31420.2 36.792 106 59 4 238 342 406 504 5.55e-11 64.7
Msa0739930 AT1G31420.1 36.792 106 59 4 238 342 407 505 5.80e-11 64.7
Msa0739930 AT1G31420.3 36.792 106 59 4 238 342 407 505 5.80e-11 64.7
Msa0739930 AT4G11330.1 27.391 230 125 10 152 350 34 252 5.87e-11 64.3
Msa0739930 AT1G24030.6 24.528 212 127 8 217 401 42 247 6.20e-11 63.2
Msa0739930 AT1G68690.1 28.365 208 116 8 165 347 381 580 6.41e-11 64.7
Msa0739930 AT1G68690.3 28.365 208 116 8 165 347 381 580 6.41e-11 64.7
Msa0739930 AT1G68690.2 28.365 208 116 8 165 347 381 580 6.41e-11 64.7
Msa0739930 AT1G56120.3 27.184 206 110 8 165 341 548 742 6.95e-11 64.7
Msa0739930 AT5G20050.1 29.545 220 100 9 163 341 105 310 7.02e-11 64.3
Msa0739930 AT2G31880.1 31.496 127 76 4 238 359 466 586 7.59e-11 64.3
Msa0739930 AT3G28040.1 30.714 140 90 4 211 347 804 939 7.60e-11 64.7
Msa0739930 AT4G36450.1 31.897 116 60 5 230 342 130 229 7.82e-11 63.5
Msa0739930 AT3G13380.1 26.606 218 117 9 165 347 862 1071 8.09e-11 64.7
Msa0739930 AT5G49770.1 39.000 100 54 3 244 342 741 834 8.12e-11 64.7
Msa0739930 AT1G60800.1 27.149 221 122 9 165 354 305 517 8.59e-11 64.3
Msa0739930 AT1G56120.1 27.184 206 110 8 165 341 714 908 8.75e-11 64.7
Msa0739930 AT1G68690.4 28.365 208 116 8 165 347 381 580 8.81e-11 64.3

Find 87 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACGTCTTCCTTAACCTTCT+TGG 0.191404 5_1:+58668020 Msa0739930:CDS
CTCATCAAACAAAACATTTC+CGG 0.243441 5_1:-58669033 None:intergenic
CTCTTTGGCAGACGTCCTTT+CGG 0.247340 5_1:+58669627 Msa0739930:CDS
TCTTTGGCAGACGTCCTTTC+GGG 0.255523 5_1:+58669628 Msa0739930:CDS
ATTGCCAAAGTGACTGATTT+TGG 0.256458 5_1:+58669062 Msa0739930:CDS
TGGATCTACTGTTTCTAATA+AGG 0.280426 5_1:+58669725 Msa0739930:CDS
GCCTCGTTCTCGGGCAAAAT+AGG 0.302598 5_1:-58668927 None:intergenic
TTCCGGGCTTTAAATCATAA+TGG 0.335280 5_1:-58669016 None:intergenic
ATACATAAGGCATGCAATTC+GGG 0.338859 5_1:+58668327 Msa0739930:CDS
TTGCTCTGCTCAAAGCATTC+AGG 0.349888 5_1:-58669347 None:intergenic
ATATTATTCTCTGTTGTGTT+TGG 0.364818 5_1:-58669656 None:intergenic
TGAGCAATTGTTAATACATC+TGG 0.365932 5_1:-58670505 None:intergenic
CTCGACTAGCCAGCATTAAA+CGG 0.372614 5_1:+58667802 Msa0739930:CDS
GATACATAAGGCATGCAATT+CGG 0.376790 5_1:+58668326 Msa0739930:CDS
TCATCAAACAAAACATTTCC+GGG 0.383234 5_1:-58669032 None:intergenic
AACGACTTTAGCCTCGTTCT+CGG 0.388141 5_1:-58668937 None:intergenic
GAACTGTCGTATCTGAGATC+TGG 0.388952 5_1:+58666787 Msa0739930:CDS
CCCAGGGTGCTGGAACATAT+TGG 0.409062 5_1:+58669138 Msa0739930:CDS
CTCCCTTTCCAAGAAGGTTA+AGG 0.410628 5_1:-58668028 None:intergenic
TCGTGAAATGAAACGCATAC+TGG 0.425758 5_1:+58667950 Msa0739930:CDS
ATCCATTATGATTTAAAGCC+CGG 0.428092 5_1:+58669014 Msa0739930:CDS
TTCCTTAACCTTCTTGGAAA+GGG 0.436951 5_1:+58668026 Msa0739930:CDS
GGAGAATGACGTGGGATCCC+AGG 0.443783 5_1:+58669100 Msa0739930:CDS
CAGGTTGATGTCTGGTCTGC+TGG 0.447095 5_1:+58669585 Msa0739930:intron
ACGACTTTAGCCTCGTTCTC+GGG 0.447216 5_1:-58668936 None:intergenic
CGACAGAATTCGTTGAGACT+TGG 0.460030 5_1:+58666663 Msa0739930:CDS
ACCAATATGTTCCAGCACCC+TGG 0.462746 5_1:-58669139 None:intergenic
AAATCATAATGGATAACCTT+CGG 0.464229 5_1:-58669005 None:intergenic
TATGTTGCATGCAAGCTTCA+TGG 0.476601 5_1:+58668268 Msa0739930:CDS
ATACATCTGGTCTCTCCGCC+TGG 0.485420 5_1:-58670492 None:intergenic
CCAATATGTTCCAGCACCCT+GGG 0.487394 5_1:-58669138 None:intergenic
GAACTTACATCCCAGGGTGC+TGG 0.489683 5_1:+58669128 Msa0739930:CDS
TATAGCCTCCCTTTCCAAGA+AGG 0.491599 5_1:-58668034 None:intergenic
TCGACTAGCCAGCATTAAAC+GGG 0.492390 5_1:+58667803 Msa0739930:CDS
GGAAGATGGTCCGGCGTTGA+AGG 0.493753 5_1:+58666809 Msa0739930:CDS
TGACGTGGGATCCCAGGGTA+TGG 0.494154 5_1:+58669106 Msa0739930:CDS
GCAACTTACCCGTTTAATGC+TGG 0.500123 5_1:-58667811 None:intergenic
AGAAGAAGCAAAGATACATA+AGG 0.502262 5_1:+58668314 Msa0739930:CDS
GTGGAAAACAGGTTGATGTC+TGG 0.502498 5_1:+58669577 Msa0739930:intron
TGAGATCTGGGAAGATGGTC+CGG 0.504164 5_1:+58666800 Msa0739930:CDS
AGGCTATAGCGAGGTGTACA+AGG 0.504249 5_1:+58668049 Msa0739930:CDS
AGATGCAGAGGCTGGATTGT+CGG 0.513612 5_1:+58667746 Msa0739930:CDS
TTCTTTCATTCATGTAAACA+AGG 0.517252 5_1:-58668980 None:intergenic
CTTCCTTAACCTTCTTGGAA+AGG 0.521275 5_1:+58668025 Msa0739930:CDS
GGGTATGGAACTTACATCCC+AGG 0.526804 5_1:+58669121 Msa0739930:CDS
AAGACCAAAATCAGTCACTT+TGG 0.528872 5_1:-58669066 None:intergenic
TACTGTTTCTAATAAGGCTA+AGG 0.529499 5_1:+58669731 Msa0739930:CDS
GTATCTGAGATCTGGGAAGA+TGG 0.538284 5_1:+58666795 Msa0739930:CDS
GATGGAATAGATGCAGAGGC+TGG 0.540764 5_1:+58667738 Msa0739930:CDS
CTTAACCTTCTTGGAAAGGG+AGG 0.544842 5_1:+58668029 Msa0739930:CDS
CCACCTCTACGAACTAGAGA+AGG 0.545424 5_1:+58667917 Msa0739930:CDS
AACTGTCGTATCTGAGATCT+GGG 0.545951 5_1:+58666788 Msa0739930:CDS
GGATGTAAGTTCCATACCCT+GGG 0.549900 5_1:-58669117 None:intergenic
ATGGTTGAAGATAAGGGTGA+TGG 0.550332 5_1:+58667720 Msa0739930:intron
CACGAAGTAGAATTTCCCTC+TGG 0.565256 5_1:+58669705 Msa0739930:CDS
CGAAGAGAAAATGAAACCTA+AGG 0.565721 5_1:+58666300 None:intergenic
GGGATGTAAGTTCCATACCC+TGG 0.566104 5_1:-58669118 None:intergenic
GCATGCAGATCCTTCAACGC+CGG 0.570923 5_1:-58666819 None:intergenic
CTTGCTGAAGTCAGTGTCAA+AGG 0.579665 5_1:+58666611 Msa0739930:CDS
GAGAATGACGTGGGATCCCA+GGG 0.586331 5_1:+58669101 Msa0739930:CDS
CATGAATGAAAGAACGCCGA+AGG 0.589780 5_1:+58668989 Msa0739930:CDS
GTATAATATTCACAAGACCT+TGG 0.590329 5_1:+58668351 Msa0739930:CDS
CCTTCTCTAGTTCGTAGAGG+TGG 0.590813 5_1:-58667917 None:intergenic
TTCATGGTGTAAATGCTCAA+TGG 0.599823 5_1:+58668284 Msa0739930:CDS
GAAACAACTGCAAGAAACAA+AGG 0.606100 5_1:+58667347 Msa0739930:intron
CAAGATAGTGGAGAATGACG+TGG 0.612643 5_1:+58669091 Msa0739930:CDS
CTCTGCTCAAAGCATTCAGG+AGG 0.615082 5_1:-58669344 None:intergenic
TCTTTCATTCATGTAAACAA+GGG 0.617138 5_1:-58668979 None:intergenic
AACAATATGACGATGAACCA+AGG 0.617976 5_1:-58668368 None:intergenic
TTCCCTTCTCTAGTTCGTAG+AGG 0.621836 5_1:-58667920 None:intergenic
GACACCTCGCATATCATCCA+AGG 0.625214 5_1:+58669370 Msa0739930:CDS
TGTGTTTGGTCATGCCCGAA+AGG 0.626224 5_1:-58669642 None:intergenic
AGGTTGAGAGACAAGAAGCA+AGG 0.628654 5_1:+58666631 Msa0739930:CDS
AGCGGTTAGACATACAAGCT+GGG 0.629747 5_1:-58666841 None:intergenic
CACCTCTACGAACTAGAGAA+GGG 0.631328 5_1:+58667918 Msa0739930:CDS
GCGGTGTCTTACATATGACC+AGG 0.641982 5_1:+58670474 Msa0739930:CDS
AAGATAGTGGAGAATGACGT+GGG 0.645966 5_1:+58669092 Msa0739930:CDS
GGTATGGAACTTACATCCCA+GGG 0.647817 5_1:+58669122 Msa0739930:CDS
GGGTGATGGAATAGATGCAG+AGG 0.649260 5_1:+58667734 Msa0739930:CDS
TTTACCTTGGATGATATGCG+AGG 0.653766 5_1:-58669374 None:intergenic
ATTAGAAACAGTAGATCCAG+AGG 0.657220 5_1:-58669721 None:intergenic
TTAGAAACAGTAGATCCAGA+GGG 0.665149 5_1:-58669720 None:intergenic
GGTTAAGGAAGACGTAACGA+TGG 0.670920 5_1:-58668013 None:intergenic
ACAACTGCAAGAAACAAAGG+AGG 0.701854 5_1:+58667350 Msa0739930:CDS
GGAAGATATTCTCATTCACG+AGG 0.708360 5_1:+58667767 Msa0739930:CDS
TGGAAAGGGAGGCTATAGCG+AGG 0.734939 5_1:+58668040 Msa0739930:CDS
GTGTCTTACATATGACCAGG+CGG 0.735603 5_1:+58670477 Msa0739930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATTTAAAATATAATGAAT+TGG + chr5_1:58666409-58666428 Msa0739930:intron 10.0%
!!! TTTCATAATATTTTTATTTC+GGG + chr5_1:58666726-58666745 Msa0739930:intron 10.0%
!! TTCCTATATTAAAATAAAAA+GGG - chr5_1:58670136-58670155 None:intergenic 10.0%
!!! TTTAAAATATAATGAATTGG+TGG + chr5_1:58666412-58666431 Msa0739930:intron 15.0%
!! CATGATATATAATAATACAA+GGG - chr5_1:58667562-58667581 None:intergenic 15.0%
!! TCATGATATATAATAATACA+AGG - chr5_1:58667563-58667582 None:intergenic 15.0%
!!! AATTTTGTGAATATTATACA+AGG + chr5_1:58668118-58668137 Msa0739930:intron 15.0%
!! TTATTTGAGCTTATATATAA+TGG + chr5_1:58668581-58668600 Msa0739930:intron 15.0%
!!! AATTAAAAAGTTTTTTACCT+TGG - chr5_1:58669390-58669409 None:intergenic 15.0%
!! TAATATAAGTAAATGAAAGA+TGG - chr5_1:58669809-58669828 None:intergenic 15.0%
!! TATATTATTCTATTGTTTAG+TGG + chr5_1:58669822-58669841 Msa0739930:intron 15.0%
!!! TTGTTTTAGGTTATATTTAT+TGG + chr5_1:58669861-58669880 Msa0739930:intron 15.0%
!! TCCTATATTAAAATAAAAAG+GGG - chr5_1:58670135-58670154 None:intergenic 15.0%
!! CTTCCTATATTAAAATAAAA+AGG - chr5_1:58670137-58670156 None:intergenic 15.0%
!!! CTTTTTATTTTAATATAGGA+AGG + chr5_1:58670135-58670154 Msa0739930:intron 15.0%
!!! TTATATTTTAAATACCACGT+AGG - chr5_1:58666404-58666423 None:intergenic 20.0%
!! TTGTTGCAAAATAAATACAA+GGG - chr5_1:58666873-58666892 None:intergenic 20.0%
!! ATTGTTGCAAAATAAATACA+AGG - chr5_1:58666874-58666893 None:intergenic 20.0%
!!! TTGTATTTATTTTGCAACAA+TGG + chr5_1:58666873-58666892 Msa0739930:intron 20.0%
!! AATATAAGATCTTTAATGAG+AGG - chr5_1:58667064-58667083 None:intergenic 20.0%
!! AATCCAAAAAAAAAGCAAAA+TGG - chr5_1:58667108-58667127 None:intergenic 20.0%
!! GATGACTAAATACAATTATA+AGG + chr5_1:58667128-58667147 Msa0739930:intron 20.0%
!! ACTAAATACAATTATAAGGA+CGG + chr5_1:58667132-58667151 Msa0739930:intron 20.0%
!! TTCTGTAAAACATAAATCAA+GGG - chr5_1:58667330-58667349 None:intergenic 20.0%
!! TTTCTGTAAAACATAAATCA+AGG - chr5_1:58667331-58667350 None:intergenic 20.0%
!! TTATTCAAGAAAAAACAATC+TGG + chr5_1:58667393-58667412 Msa0739930:CDS 20.0%
!! TATTTACATTTGCCAATAAA+AGG - chr5_1:58668182-58668201 None:intergenic 20.0%
!!! TGAAGATAATTATTTTGTAG+TGG + chr5_1:58668478-58668497 Msa0739930:intron 20.0%
!! AAGCTTAAAACTAACAAATT+TGG - chr5_1:58669210-58669229 None:intergenic 20.0%
!! AAAGTTAAAGTATAATGAAG+AGG - chr5_1:58669236-58669255 None:intergenic 20.0%
!!! TTAAACCAACATCATTTTAA+TGG - chr5_1:58669974-58669993 None:intergenic 20.0%
!! GAACCATAATAATATTTCTT+AGG + chr5_1:58670086-58670105 Msa0739930:intron 20.0%
!! AAGCCTAAGAAATATTATTA+TGG - chr5_1:58670092-58670111 None:intergenic 20.0%
!!! TCCCCTTTTTATTTTAATAT+AGG + chr5_1:58670131-58670150 Msa0739930:intron 20.0%
!!! AACTATTGATTGGAAATTAA+TGG - chr5_1:58670309-58670328 None:intergenic 20.0%
!!! AGATAAAAAGGTACTATTTT+TGG - chr5_1:58670386-58670405 None:intergenic 20.0%
!!! AATATTGTCAGGATTTTATT+CGG + chr5_1:58670452-58670471 Msa0739930:intron 20.0%
! GTGAAAAATAATCATACCTT+AGG - chr5_1:58666319-58666338 None:intergenic 25.0%
!!! ATGAACTAGAAATTTTGAAG+AGG + chr5_1:58666473-58666492 Msa0739930:intron 25.0%
!!! GAAATGTTTTAATCAGGTAT+AGG + chr5_1:58666685-58666704 Msa0739930:intron 25.0%
!!! TTTTATTTCGGGTTTCTTAT+TGG + chr5_1:58666737-58666756 Msa0739930:intron 25.0%
! TGTTGCAAAATAAATACAAG+GGG - chr5_1:58666872-58666891 None:intergenic 25.0%
! GAAAGAAATTATCCAAAACA+GGG - chr5_1:58666930-58666949 None:intergenic 25.0%
! AGAAAGAAATTATCCAAAAC+AGG - chr5_1:58666931-58666950 None:intergenic 25.0%
!! ATGTTTCTATTACTTCTGTA+TGG + chr5_1:58667223-58667242 Msa0739930:intron 25.0%
! AAAACATAAATCAAGGGATA+AGG - chr5_1:58667324-58667343 None:intergenic 25.0%
! AAAATGCAAACTAAGAATGA+GGG - chr5_1:58667524-58667543 None:intergenic 25.0%
! TATGTCAATTAGTCATCTTA+AGG - chr5_1:58667593-58667612 None:intergenic 25.0%
! TTTGTTTCAAATCAACCTAT+CGG + chr5_1:58667618-58667637 Msa0739930:intron 25.0%
! TTATTCTGCTTACTTTCTAA+CGG + chr5_1:58667667-58667686 Msa0739930:intron 25.0%
!!! GGTTTGAATTTTGTTTTTCT+TGG + chr5_1:58667688-58667707 Msa0739930:intron 25.0%
! TTATCTTCAACCATAGAAAA+GGG - chr5_1:58667714-58667733 None:intergenic 25.0%
!! TTTTCTATGGTTGAAGATAA+GGG + chr5_1:58667714-58667733 Msa0739930:intron 25.0%
! TTTCCTCTTTATACTTCTAA+TGG + chr5_1:58667853-58667872 Msa0739930:intron 25.0%
!! CTAATGGTAGAACAATTTTT+AGG + chr5_1:58667869-58667888 Msa0739930:intron 25.0%
! TTATCTTCATAAAACAGATG+AGG - chr5_1:58668467-58668486 None:intergenic 25.0%
! AATCAAACAGACAATATTAG+AGG - chr5_1:58668825-58668844 None:intergenic 25.0%
! TCTTTCATTCATGTAAACAA+GGG - chr5_1:58668982-58669001 None:intergenic 25.0%
! TTCTTTCATTCATGTAAACA+AGG - chr5_1:58668983-58669002 None:intergenic 25.0%
!!! AAATCATAATGGATAACCTT+CGG - chr5_1:58669008-58669027 None:intergenic 25.0%
! AAAGATCATTGAAACATGAA+GGG - chr5_1:58669265-58669284 None:intergenic 25.0%
! CTGCAAATCAAAAAAGAAAA+GGG - chr5_1:58669317-58669336 None:intergenic 25.0%
! TTTCAATTTGTCAGTCATTA+TGG + chr5_1:58669446-58669465 Msa0739930:intron 25.0%
!!! AGTTAGTTGTTTTCACAATA+CGG - chr5_1:58669505-58669524 None:intergenic 25.0%
!!! TGTTTTTATTACATGCTCTT+TGG + chr5_1:58669612-58669631 Msa0739930:CDS 25.0%
! ATATTATTCTCTGTTGTGTT+TGG - chr5_1:58669659-58669678 None:intergenic 25.0%
! AGGCAGTAATTACAATAAAA+GGG - chr5_1:58669767-58669786 None:intergenic 25.0%
! ATTATTCTATTGTTTAGTGG+TGG + chr5_1:58669825-58669844 Msa0739930:intron 25.0%
! CAAATTCAGATAAATCACAA+AGG - chr5_1:58669925-58669944 None:intergenic 25.0%
! GCAGAATTATAACTATTGAT+TGG - chr5_1:58670319-58670338 None:intergenic 25.0%
!!! AAAGGTACTATTTTTGGATT+TGG - chr5_1:58670380-58670399 None:intergenic 25.0%
! GTAAGGATGTATAGATAAAA+AGG - chr5_1:58670398-58670417 None:intergenic 25.0%
TCATACTCCTGTATAAGTTA+AGG + chr5_1:58666505-58666524 Msa0739930:intron 30.0%
!!! TTTTTTTTATGCGTGACACA+TGG - chr5_1:58666537-58666556 None:intergenic 30.0%
!!! GACTTGGAAATGTTTTAATC+AGG + chr5_1:58666679-58666698 Msa0739930:CDS 30.0%
!!! ATGTTTTAATCAGGTATAGG+TGG + chr5_1:58666688-58666707 Msa0739930:intron 30.0%
!! TTTGTGCAACAATGGTTTTA+TGG + chr5_1:58667037-58667056 Msa0739930:intron 30.0%
!!! TTGTGCAACAATGGTTTTAT+GGG + chr5_1:58667038-58667057 Msa0739930:intron 30.0%
!!! TCGCCATTTTGCTTTTTTTT+TGG + chr5_1:58667102-58667121 Msa0739930:intron 30.0%
AAATACAATTATAAGGACGG+TGG + chr5_1:58667135-58667154 Msa0739930:intron 30.0%
AAAGGGAAAAAAAGGATACT+GGG - chr5_1:58667424-58667443 None:intergenic 30.0%
GCTAAAAGAAAGGGAAAAAA+AGG - chr5_1:58667432-58667451 None:intergenic 30.0%
AAGACAAGTGCTAAAAGAAA+GGG - chr5_1:58667441-58667460 None:intergenic 30.0%
TAAGACAAGTGCTAAAAGAA+AGG - chr5_1:58667442-58667461 None:intergenic 30.0%
AAATGCAAACTAAGAATGAG+GGG - chr5_1:58667523-58667542 None:intergenic 30.0%
CAAAATGCAAACTAAGAATG+AGG - chr5_1:58667525-58667544 None:intergenic 30.0%
CTTATCTTCAACCATAGAAA+AGG - chr5_1:58667715-58667734 None:intergenic 30.0%
! CTTTTCTATGGTTGAAGATA+AGG + chr5_1:58667713-58667732 Msa0739930:intron 30.0%
! CTACCATTAGAAGTATAAAG+AGG - chr5_1:58667859-58667878 None:intergenic 30.0%
TACTTCAAATCACTGCAAAA+AGG - chr5_1:58668209-58668228 None:intergenic 30.0%
TGAAGTAAAAAATTTCCAGC+AGG + chr5_1:58668222-58668241 Msa0739930:intron 30.0%
AGAAGAAGCAAAGATACATA+AGG + chr5_1:58668314-58668333 Msa0739930:CDS 30.0%
GTATAATATTCACAAGACCT+TGG + chr5_1:58668351-58668370 Msa0739930:CDS 30.0%
ATCGTCATATTGTTCGTTTA+TGG + chr5_1:58668377-58668396 Msa0739930:intron 30.0%
TCGTCATATTGTTCGTTTAT+GGG + chr5_1:58668378-58668397 Msa0739930:intron 30.0%
!!! TCGTTTTAAGAAAACAAGTG+AGG - chr5_1:58668514-58668533 None:intergenic 30.0%
!!! GACTATTTTGCTGACTTTTT+TGG + chr5_1:58668532-58668551 Msa0739930:intron 30.0%
!! AGATCTTGATGATGTTCTTA+AGG + chr5_1:58668899-58668918 Msa0739930:intron 30.0%
! ATCCATTATGATTTAAAGCC+CGG + chr5_1:58669014-58669033 Msa0739930:CDS 30.0%
TCATCAAACAAAACATTTCC+GGG - chr5_1:58669035-58669054 None:intergenic 30.0%
CTCATCAAACAAAACATTTC+CGG - chr5_1:58669036-58669055 None:intergenic 30.0%
!!! AATGTTTTGTTTGATGAGCT+TGG + chr5_1:58669038-58669057 Msa0739930:CDS 30.0%
GAAAGATCATTGAAACATGA+AGG - chr5_1:58669266-58669285 None:intergenic 30.0%
AAAAAAGAAAAGGGAAAGAG+AGG - chr5_1:58669308-58669327 None:intergenic 30.0%
CCTGCAAATCAAAAAAGAAA+AGG - chr5_1:58669318-58669337 None:intergenic 30.0%
!!! CCTTTTCTTTTTTGATTTGC+AGG + chr5_1:58669315-58669334 Msa0739930:intron 30.0%
!! GTACTGATTATCATGAAAGA+TGG - chr5_1:58669537-58669556 None:intergenic 30.0%
!! TGGATCTACTGTTTCTAATA+AGG + chr5_1:58669725-58669744 Msa0739930:CDS 30.0%
!! TACTGTTTCTAATAAGGCTA+AGG + chr5_1:58669731-58669750 Msa0739930:CDS 30.0%
GGCAGTAATTACAATAAAAG+GGG - chr5_1:58669766-58669785 None:intergenic 30.0%
CAGGCAGTAATTACAATAAA+AGG - chr5_1:58669768-58669787 None:intergenic 30.0%
!! ACACAATCTTTGCTTGTTTT+AGG + chr5_1:58669848-58669867 Msa0739930:intron 30.0%
!! ATTTTAATGGCACTGAGATA+TGG - chr5_1:58669961-58669980 None:intergenic 30.0%
TTGCACCAATGAGAAATTAT+TGG + chr5_1:58670008-58670027 Msa0739930:intron 30.0%
CACAACCAATAATTTCTCAT+TGG - chr5_1:58670016-58670035 None:intergenic 30.0%
TTCTGTCAGTGATAATAAGA+AGG - chr5_1:58670069-58670088 None:intergenic 30.0%
TAATATTTCTTAGGCTTGAG+CGG + chr5_1:58670095-58670114 Msa0739930:intron 30.0%
CATCACAATCTTTCAATCAA+CGG - chr5_1:58670242-58670261 None:intergenic 30.0%
ATTCTGCATCATATTCTCTA+AGG + chr5_1:58670332-58670351 Msa0739930:intron 30.0%
AATTGTCAGGTTTCATAGTA+AGG - chr5_1:58670415-58670434 None:intergenic 30.0%
TGAGCAATTGTTAATACATC+TGG - chr5_1:58670508-58670527 None:intergenic 30.0%
ACAACTACTGTGCGATAAAA+AGG - chr5_1:58666341-58666360 None:intergenic 35.0%
! TTTTATCGCACAGTAGTTGT+TGG + chr5_1:58666341-58666360 Msa0739930:intron 35.0%
GAATGCTCCTTAACTTATAC+AGG - chr5_1:58666515-58666534 None:intergenic 35.0%
TCTCTGCAAAATACAAGAAC+AGG - chr5_1:58666574-58666593 None:intergenic 35.0%
TTATGAATGAATGTCAGAGC+TGG + chr5_1:58666765-58666784 Msa0739930:intron 35.0%
TAAATACAAGGGGAAGAAAG+CGG - chr5_1:58666862-58666881 None:intergenic 35.0%
! CGTTTTCATTTGTGCAACAA+TGG + chr5_1:58667029-58667048 Msa0739930:intron 35.0%
GTACTGAAAATGAAAACGCT+TGG - chr5_1:58667174-58667193 None:intergenic 35.0%
TCAAGGGATAAGGAAATTCA+TGG - chr5_1:58667314-58667333 None:intergenic 35.0%
GAAACAACTGCAAGAAACAA+AGG + chr5_1:58667347-58667366 Msa0739930:intron 35.0%
GAAAGGGAAAAAAAGGATAC+TGG - chr5_1:58667425-58667444 None:intergenic 35.0%
AGCACTTGTCTTACTAAACT+TGG + chr5_1:58667449-58667468 Msa0739930:intron 35.0%
GCACTTGTCTTACTAAACTT+GGG + chr5_1:58667450-58667469 Msa0739930:intron 35.0%
CACTTGTCTTACTAAACTTG+GGG + chr5_1:58667451-58667470 Msa0739930:intron 35.0%
! TTTTTCTTGGCCCTTTTCTA+TGG + chr5_1:58667701-58667720 Msa0739930:intron 35.0%
TTCCTTAACCTTCTTGGAAA+GGG + chr5_1:58668026-58668045 Msa0739930:CDS 35.0%
!!! AAAGGAACTCTCTAGGATTT+TGG - chr5_1:58668158-58668177 None:intergenic 35.0%
! AGAGTTCCTTTGCCTTTTAT+TGG + chr5_1:58668167-58668186 Msa0739930:intron 35.0%
CATTTGCCAATAAAAGGCAA+AGG - chr5_1:58668176-58668195 None:intergenic 35.0%
TTCATGGTGTAAATGCTCAA+TGG + chr5_1:58668284-58668303 Msa0739930:CDS 35.0%
GATACATAAGGCATGCAATT+CGG + chr5_1:58668326-58668345 Msa0739930:CDS 35.0%
ATACATAAGGCATGCAATTC+GGG + chr5_1:58668327-58668346 Msa0739930:CDS 35.0%
AACAATATGACGATGAACCA+AGG - chr5_1:58668371-58668390 None:intergenic 35.0%
AGAACAGTGCAGAATGTATT+TGG - chr5_1:58668421-58668440 None:intergenic 35.0%
GCTTATTTCGATAACTCTCT+AGG + chr5_1:58668654-58668673 Msa0739930:intron 35.0%
! TTAAGTTGTTCATCCGAACA+TGG + chr5_1:58668799-58668818 Msa0739930:intron 35.0%
ACAATATTAGAGGCCATGTT+CGG - chr5_1:58668815-58668834 None:intergenic 35.0%
AGAAAACAAGGGAGGATTAA+AGG - chr5_1:58668870-58668889 None:intergenic 35.0%
CTTTACCTGGTAGAAAACAA+GGG - chr5_1:58668881-58668900 None:intergenic 35.0%
TCTTTACCTGGTAGAAAACA+AGG - chr5_1:58668882-58668901 None:intergenic 35.0%
ACATCATCAAGATCTTTACC+TGG - chr5_1:58668894-58668913 None:intergenic 35.0%
!! TTCCGGGCTTTAAATCATAA+TGG - chr5_1:58669019-58669038 None:intergenic 35.0%
!! ATTGCCAAAGTGACTGATTT+TGG + chr5_1:58669062-58669081 Msa0739930:CDS 35.0%
AAGACCAAAATCAGTCACTT+TGG - chr5_1:58669069-58669088 None:intergenic 35.0%
!!! TTTTGGTCTTAGCAAGATAG+TGG + chr5_1:58669079-58669098 Msa0739930:CDS 35.0%
GTGATGAAGATCATTGTTGT+AGG + chr5_1:58669164-58669183 Msa0739930:intron 35.0%
! CACTTTACATTTCTGACTTG+TGG + chr5_1:58669558-58669577 Msa0739930:intron 35.0%
! ATTTCTGACTTGTGGAAAAC+AGG + chr5_1:58669566-58669585 Msa0739930:intron 35.0%
TTAGAAACAGTAGATCCAGA+GGG - chr5_1:58669723-58669742 None:intergenic 35.0%
ATTAGAAACAGTAGATCCAG+AGG - chr5_1:58669724-58669743 None:intergenic 35.0%
! CAGTGCCATTAAAATGATGT+TGG + chr5_1:58669966-58669985 Msa0739930:intron 35.0%
ACGTAAGCATGCTTATATCT+GGG - chr5_1:58670181-58670200 None:intergenic 35.0%
AACGTAAGCATGCTTATATC+TGG - chr5_1:58670182-58670201 None:intergenic 35.0%
GATATAAGCATGCTTACGTT+TGG + chr5_1:58670182-58670201 Msa0739930:intron 35.0%
ACAGCTATATGCAAAACGAA+TGG + chr5_1:58670266-58670285 Msa0739930:intron 35.0%
ACACAGTAGAGATAATTGTC+AGG - chr5_1:58670428-58670447 None:intergenic 35.0%
ACTGTGTGTACAATATTGTC+AGG + chr5_1:58670441-58670460 Msa0739930:intron 35.0%
! ATTGTCAGGATTTTATTCGG+CGG + chr5_1:58670455-58670474 Msa0739930:intron 35.0%
!! CTCATATCTCACTTTTACTC+AGG + chr5_1:58670531-58670550 Msa0739930:CDS 35.0%
TCTTGTGTCGTGATAGAATC+AGG - chr5_1:58666379-58666398 None:intergenic 40.0%
TGCAAAATACAAGAACAGGC+TGG - chr5_1:58666570-58666589 None:intergenic 40.0%
! AACTGTCGTATCTGAGATCT+GGG + chr5_1:58666788-58666807 Msa0739930:CDS 40.0%
! ATAGATGTCACACCCTGTTT+TGG + chr5_1:58666915-58666934 Msa0739930:intron 40.0%
GACGTAACACAACACATCAT+CGG + chr5_1:58666978-58666997 Msa0739930:intron 40.0%
ACAACTGCAAGAAACAAAGG+AGG + chr5_1:58667350-58667369 Msa0739930:CDS 40.0%
GAAAAGAACAGTCACTCATG+CGG - chr5_1:58667494-58667513 None:intergenic 40.0%
AACTAAGAATGAGGGGAAAG+AGG - chr5_1:58667516-58667535 None:intergenic 40.0%
ATGGTTGAAGATAAGGGTGA+TGG + chr5_1:58667720-58667739 Msa0739930:intron 40.0%
GGAAGATATTCTCATTCACG+AGG + chr5_1:58667767-58667786 Msa0739930:CDS 40.0%
TCGTGAAATGAAACGCATAC+TGG + chr5_1:58667950-58667969 Msa0739930:CDS 40.0%
TACGTCTTCCTTAACCTTCT+TGG + chr5_1:58668020-58668039 Msa0739930:CDS 40.0%
CTTCCTTAACCTTCTTGGAA+AGG + chr5_1:58668025-58668044 Msa0739930:CDS 40.0%
AAAAGGCAAAGGAACTCTCT+AGG - chr5_1:58668165-58668184 None:intergenic 40.0%
TATGTTGCATGCAAGCTTCA+TGG + chr5_1:58668268-58668287 Msa0739930:CDS 40.0%
!! ACTGTTCTAGAGTATTGCAG+CGG + chr5_1:58668433-58668452 Msa0739930:intron 40.0%
TGGTAGATTACGAGTCTGTT+TGG + chr5_1:58668552-58668571 Msa0739930:intron 40.0%
AACAAGGGAGGATTAAAGGA+AGG - chr5_1:58668866-58668885 None:intergenic 40.0%
!! AAGATAGTGGAGAATGACGT+GGG + chr5_1:58669092-58669111 Msa0739930:CDS 40.0%
TTTACCTTGGATGATATGCG+AGG - chr5_1:58669377-58669396 None:intergenic 40.0%
TTGTCAGTCATTATGGTCAG+TGG + chr5_1:58669453-58669472 Msa0739930:intron 40.0%
ATTATGGTCAGTGGACATTC+TGG + chr5_1:58669462-58669481 Msa0739930:intron 40.0%
TTATGGTCAGTGGACATTCT+GGG + chr5_1:58669463-58669482 Msa0739930:intron 40.0%
GCCTGTTGCTAATTGTTCTT+TGG + chr5_1:58669783-58669802 Msa0739930:intron 40.0%
GCCAAAGAACAATTAGCAAC+AGG - chr5_1:58669787-58669806 None:intergenic 40.0%
ATTCCATGTGCAAGCACAAT+TGG + chr5_1:58669899-58669918 Msa0739930:intron 40.0%
! TTAATGGCACTGAGATATGG+AGG - chr5_1:58669958-58669977 None:intergenic 40.0%
CGTAAGCATGCTTATATCTG+GGG - chr5_1:58670180-58670199 None:intergenic 40.0%
!!! AGGAGCACTCATCATTTTAG+AGG + chr5_1:58670352-58670371 Msa0739930:intron 40.0%
CTTGCTGAAGTCAGTGTCAA+AGG + chr5_1:58666611-58666630 Msa0739930:CDS 45.0%
AGGTTGAGAGACAAGAAGCA+AGG + chr5_1:58666631-58666650 Msa0739930:CDS 45.0%
CGACAGAATTCGTTGAGACT+TGG + chr5_1:58666663-58666682 Msa0739930:CDS 45.0%
! GAACTGTCGTATCTGAGATC+TGG + chr5_1:58666787-58666806 Msa0739930:CDS 45.0%
! GTATCTGAGATCTGGGAAGA+TGG + chr5_1:58666795-58666814 Msa0739930:CDS 45.0%
AGCGGTTAGACATACAAGCT+GGG - chr5_1:58666844-58666863 None:intergenic 45.0%
AAGCGGTTAGACATACAAGC+TGG - chr5_1:58666845-58666864 None:intergenic 45.0%
CAAACTGCTGTCATAGGCAA+TGG - chr5_1:58667280-58667299 None:intergenic 45.0%
CTAACGCAAACTGCTGTCAT+AGG - chr5_1:58667286-58667305 None:intergenic 45.0%
TCAACCTATCGGATACTGCT+AGG + chr5_1:58667629-58667648 Msa0739930:intron 45.0%
ATAGCCTAGCAGTATCCGAT+AGG - chr5_1:58667636-58667655 None:intergenic 45.0%
! CTCGACTAGCCAGCATTAAA+CGG + chr5_1:58667802-58667821 Msa0739930:CDS 45.0%
! TCGACTAGCCAGCATTAAAC+GGG + chr5_1:58667803-58667822 Msa0739930:CDS 45.0%
GCAACTTACCCGTTTAATGC+TGG - chr5_1:58667814-58667833 None:intergenic 45.0%
CACCTCTACGAACTAGAGAA+GGG + chr5_1:58667918-58667937 Msa0739930:CDS 45.0%
! TTCCCTTCTCTAGTTCGTAG+AGG - chr5_1:58667923-58667942 None:intergenic 45.0%
GGTTAAGGAAGACGTAACGA+TGG - chr5_1:58668016-58668035 None:intergenic 45.0%
CTCCCTTTCCAAGAAGGTTA+AGG - chr5_1:58668031-58668050 None:intergenic 45.0%
CTTAACCTTCTTGGAAAGGG+AGG + chr5_1:58668029-58668048 Msa0739930:CDS 45.0%
TATAGCCTCCCTTTCCAAGA+AGG - chr5_1:58668037-58668056 None:intergenic 45.0%
!! TTTCCAGCAGGCTTTTGACT+TGG + chr5_1:58668234-58668253 Msa0739930:intron 45.0%
!!! ATCCTCCCTTGTTTTCTACC+AGG + chr5_1:58668873-58668892 Msa0739930:intron 45.0%
TACCTGGTAGAAAACAAGGG+AGG - chr5_1:58668878-58668897 None:intergenic 45.0%
AACGACTTTAGCCTCGTTCT+CGG - chr5_1:58668940-58668959 None:intergenic 45.0%
CATGAATGAAAGAACGCCGA+AGG + chr5_1:58668989-58669008 Msa0739930:CDS 45.0%
!! CAAGATAGTGGAGAATGACG+TGG + chr5_1:58669091-58669110 Msa0739930:CDS 45.0%
GGATGTAAGTTCCATACCCT+GGG - chr5_1:58669120-58669139 None:intergenic 45.0%
GGTATGGAACTTACATCCCA+GGG + chr5_1:58669122-58669141 Msa0739930:CDS 45.0%
! TTGCTCTGCTCAAAGCATTC+AGG - chr5_1:58669350-58669369 None:intergenic 45.0%
!! ACATTCTGGGACTTGTGTCA+TGG + chr5_1:58669476-58669495 Msa0739930:intron 45.0%
!! GTGGAAAACAGGTTGATGTC+TGG + chr5_1:58669577-58669596 Msa0739930:intron 45.0%
CACGAAGTAGAATTTCCCTC+TGG + chr5_1:58669705-58669724 Msa0739930:CDS 45.0%
! TAGGCTTGAGCGGTGTTTTA+CGG + chr5_1:58670105-58670124 Msa0739930:intron 45.0%
GTGTCTTACATATGACCAGG+CGG + chr5_1:58670477-58670496 Msa0739930:CDS 45.0%
!!! TTTTCATAATATTTTTATTT+CGG + chr5_1:58666725-58666744 Msa0739930:intron 5.0%
TGAGATCTGGGAAGATGGTC+CGG + chr5_1:58666800-58666819 Msa0739930:CDS 50.0%
!! GGGTGATGGAATAGATGCAG+AGG + chr5_1:58667734-58667753 Msa0739930:CDS 50.0%
GATGGAATAGATGCAGAGGC+TGG + chr5_1:58667738-58667757 Msa0739930:CDS 50.0%
AGATGCAGAGGCTGGATTGT+CGG + chr5_1:58667746-58667765 Msa0739930:CDS 50.0%
! CCTTCTCTAGTTCGTAGAGG+TGG - chr5_1:58667920-58667939 None:intergenic 50.0%
CCACCTCTACGAACTAGAGA+AGG + chr5_1:58667917-58667936 Msa0739930:CDS 50.0%
AGGCTATAGCGAGGTGTACA+AGG + chr5_1:58668049-58668068 Msa0739930:CDS 50.0%
! ACCTATTTTGCCCGAGAACG+AGG + chr5_1:58668926-58668945 Msa0739930:CDS 50.0%
ACGACTTTAGCCTCGTTCTC+GGG - chr5_1:58668939-58668958 None:intergenic 50.0%
GGGATGTAAGTTCCATACCC+TGG - chr5_1:58669121-58669140 None:intergenic 50.0%
GGGTATGGAACTTACATCCC+AGG + chr5_1:58669121-58669140 Msa0739930:CDS 50.0%
CCAATATGTTCCAGCACCCT+GGG - chr5_1:58669141-58669160 None:intergenic 50.0%
ACCAATATGTTCCAGCACCC+TGG - chr5_1:58669142-58669161 None:intergenic 50.0%
! CTCTGCTCAAAGCATTCAGG+AGG - chr5_1:58669347-58669366 None:intergenic 50.0%
GACACCTCGCATATCATCCA+AGG + chr5_1:58669370-58669389 Msa0739930:CDS 50.0%
CTCTTTGGCAGACGTCCTTT+CGG + chr5_1:58669627-58669646 Msa0739930:CDS 50.0%
TCTTTGGCAGACGTCCTTTC+GGG + chr5_1:58669628-58669647 Msa0739930:CDS 50.0%
TGTGTTTGGTCATGCCCGAA+AGG - chr5_1:58669645-58669664 None:intergenic 50.0%
AGGCCAATTGTGCTTGCACA+TGG - chr5_1:58669905-58669924 None:intergenic 50.0%
GCGGTGTCTTACATATGACC+AGG + chr5_1:58670474-58670493 Msa0739930:CDS 50.0%
CACGACACAAGACTCCTACG+TGG + chr5_1:58666387-58666406 Msa0739930:intron 55.0%
GCATGCAGATCCTTCAACGC+CGG - chr5_1:58666822-58666841 None:intergenic 55.0%
TGGAAAGGGAGGCTATAGCG+AGG + chr5_1:58668040-58668059 Msa0739930:CDS 55.0%
CCACCAAGTCAAAAGCCTGC+TGG - chr5_1:58668240-58668259 None:intergenic 55.0%
!!! CCAGCAGGCTTTTGACTTGG+TGG + chr5_1:58668237-58668256 Msa0739930:intron 55.0%
GCCTCGTTCTCGGGCAAAAT+AGG - chr5_1:58668930-58668949 None:intergenic 55.0%
GAGAATGACGTGGGATCCCA+GGG + chr5_1:58669101-58669120 Msa0739930:CDS 55.0%
GAACTTACATCCCAGGGTGC+TGG + chr5_1:58669128-58669147 Msa0739930:CDS 55.0%
!! CCCAGGGTGCTGGAACATAT+TGG + chr5_1:58669138-58669157 Msa0739930:CDS 55.0%
!! CAGGTTGATGTCTGGTCTGC+TGG + chr5_1:58669585-58669604 Msa0739930:intron 55.0%
ATACATCTGGTCTCTCCGCC+TGG - chr5_1:58670495-58670514 None:intergenic 55.0%
! GGAAGATGGTCCGGCGTTGA+AGG + chr5_1:58666809-58666828 Msa0739930:CDS 60.0%
GGAGAATGACGTGGGATCCC+AGG + chr5_1:58669100-58669119 Msa0739930:CDS 60.0%
TGACGTGGGATCCCAGGGTA+TGG + chr5_1:58669106-58669125 Msa0739930:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 58666310 58670558 58666310 ID=Msa0739930;Name=Msa0739930
chr5_1 mRNA 58666310 58670558 58666310 ID=Msa0739930-mRNA-1;Parent=Msa0739930;Name=Msa0739930-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.2|0|1|1|1|11|0|409
chr5_1 exon 58666310 58666321 58666310 ID=Msa0739930-mRNA-1:exon:16733;Parent=Msa0739930-mRNA-1
chr5_1 exon 58666591 58666700 58666591 ID=Msa0739930-mRNA-1:exon:16734;Parent=Msa0739930-mRNA-1
chr5_1 exon 58666782 58666848 58666782 ID=Msa0739930-mRNA-1:exon:16735;Parent=Msa0739930-mRNA-1
chr5_1 exon 58667348 58667414 58667348 ID=Msa0739930-mRNA-1:exon:16736;Parent=Msa0739930-mRNA-1
chr5_1 exon 58667730 58667824 58667730 ID=Msa0739930-mRNA-1:exon:16737;Parent=Msa0739930-mRNA-1
chr5_1 exon 58667891 58668070 58667891 ID=Msa0739930-mRNA-1:exon:16738;Parent=Msa0739930-mRNA-1
chr5_1 exon 58668244 58668387 58668244 ID=Msa0739930-mRNA-1:exon:16739;Parent=Msa0739930-mRNA-1
chr5_1 exon 58668921 58669159 58668921 ID=Msa0739930-mRNA-1:exon:16740;Parent=Msa0739930-mRNA-1
chr5_1 exon 58669337 58669391 58669337 ID=Msa0739930-mRNA-1:exon:16741;Parent=Msa0739930-mRNA-1
chr5_1 exon 58669588 58669752 58669588 ID=Msa0739930-mRNA-1:exon:16742;Parent=Msa0739930-mRNA-1
chr5_1 exon 58670463 58670558 58670463 ID=Msa0739930-mRNA-1:exon:16743;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58666310 58666321 58666310 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58666591 58666700 58666591 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58666782 58666848 58666782 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58667348 58667414 58667348 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58667730 58667824 58667730 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58667891 58668070 58667891 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58668244 58668387 58668244 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58668921 58669159 58668921 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58669337 58669391 58669337 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58669588 58669752 58669588 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
chr5_1 CDS 58670463 58670558 58670463 ID=Msa0739930-mRNA-1:cds;Parent=Msa0739930-mRNA-1
Gene Sequence

>Msa0739930

ATGAAACCTAAGAGAACAGAAACAATATATGACTTGCTGAAGTCAGTGTCAAAGGTTGAGAGACAAGAAGCAAGGCTAAAAGCACGACAGAATTCGTTGAGACTTGGAAATGTTTTAATCAGAGCTGGAACTGTCGTATCTGAGATCTGGGAAGATGGTCCGGCGTTGAAGGATCTGCATGCCCAGCTTAAACAACTGCAAGAAACAAAGGAGGATATTGAGCAGCAGCACAATTTATTCAAGAAAAAACAATCTGATAAGGGTGATGGAATAGATGCAGAGGCTGGATTGTCGGAAGATATTCTCATTCACGAGGAAATCTATAAGTCTCGACTAGCCAGCATTAAACGGGAAGAAGAAATTGCTTTGCAAGAGTGCCACCTCTACGAACTAGAGAAGGGAAGACTAATTCGTGAAATGAAACGCATACTGGATGAAGATGCTTCACAGTTCAACAACTTTCAGATTTTAAACCATCGTTACGTCTTCCTTAACCTTCTTGGAAAGGGAGGCTATAGCGAGGTGTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTGTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGATACATAAGGCATGCAATTCGGGAGTATAATATTCACAAGACCTTGGTTCATCGTCATATTGAAACACCTATTTTGCCCGAGAACGAGGCTAAAGTCGTTTTATTTCAGATTATCAAAGCCCTTGTTTACATGAATGAAAGAACGCCGAAGGTTATCCATTATGATTTAAAGCCCGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATAGTGGAGAATGACGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGTGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCAGAGCAAGACACCTCGCATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTTGTTTTTATTACATGCTCTTTGGCAGACGTCCTTTCGGGCATGACCAAACACAACAGAGAATAATATTTCTTGAGCACACAATTATTAATGCACACGAAGTAGAATTTCCCTCTGGATCTACTGTTTCTAATAAGGCTAAGGATTTTATTCGGCGGTGTCTTACATATGACCAGGCGGAGAGACCAGATGTATTAACAATTGCTCAAGACTCATATCTCACTTTTACTCAGGAATAG
Protein sequence

>Msa0739930

MKPKRTETIYDLLKSVSKVERQEARLKARQNSLRLGNVLIRAGTVVSEIWEDGPALKDLHAQLKQLQETKEDIEQQHNLFKKKQSDKGDGIDAEAGLSEDILIHEEIYKSRLASIKREEEIALQECHLYELEKGRLIREMKRILDEDASQFNNFQILNHRYVFLNLLGKGGYSEVYKAFDLVEHRYVACKLHGVNAQWSEEKKQRYIRHAIREYNIHKTLVHRHIETPILPENEAKVVLFQIIKALVYMNERTPKVIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFEQSKTPRISSKVDVWSAGICFYYMLFGRRPFGHDQTQQRIIFLEHTIINAHEVEFPSGSTVSNKAKDFIRRCLTYDQAERPDVLTIAQDSYLTFTQE*