Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740470 | XP_024639128.2 | 86.117 | 461 | 47 | 2 | 12 | 459 | 5 | 461 | 0.0 | 779 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740470 | sp|Q8S9H7|DIV_ANTMA | 64.384 | 73 | 22 | 2 | 268 | 339 | 134 | 203 | 2.62e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740470 | G7K310 | 86.117 | 461 | 47 | 2 | 12 | 459 | 5 | 461 | 0.0 | 779 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0740470 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740470 | MtrunA17_Chr5g0440741 | 89.247 | 279 | 26 | 1 | 181 | 459 | 15 | 289 | 4.26e-172 | 484 |
| Msa0740470 | MtrunA17_Chr5g0440731 | 88.028 | 284 | 25 | 3 | 181 | 459 | 15 | 294 | 3.91e-168 | 474 |
| Msa0740470 | MtrunA17_Chr5g0440721 | 95.031 | 161 | 8 | 0 | 1 | 161 | 1 | 161 | 2.94e-107 | 315 |
| Msa0740470 | MtrunA17_Chr5g0440751 | 79.459 | 185 | 25 | 1 | 12 | 183 | 5 | 189 | 1.10e-97 | 291 |
| Msa0740470 | MtrunA17_Chr5g0440821 | 66.393 | 244 | 18 | 4 | 1 | 180 | 1 | 244 | 6.15e-93 | 301 |
| Msa0740470 | MtrunA17_Chr5g0409841 | 66.383 | 235 | 64 | 7 | 183 | 406 | 1 | 231 | 1.79e-86 | 264 |
| Msa0740470 | MtrunA17_Chr5g0409831 | 48.630 | 292 | 72 | 8 | 183 | 459 | 1 | 229 | 7.75e-64 | 206 |
| Msa0740470 | MtrunA17_Chr5g0409951 | 56.962 | 158 | 35 | 5 | 7 | 131 | 93 | 250 | 9.71e-40 | 144 |
| Msa0740470 | MtrunA17_Chr5g0409951 | 55.670 | 97 | 29 | 3 | 181 | 271 | 22 | 110 | 2.91e-19 | 87.4 |
| Msa0740470 | MtrunA17_Chr5g0429521 | 59.494 | 79 | 28 | 2 | 268 | 345 | 134 | 209 | 6.17e-23 | 99.0 |
| Msa0740470 | MtrunA17_Chr1g0162081 | 58.974 | 78 | 27 | 3 | 264 | 339 | 119 | 193 | 1.23e-22 | 97.8 |
| Msa0740470 | MtrunA17_Chr3g0104071 | 57.831 | 83 | 31 | 2 | 268 | 349 | 149 | 228 | 1.24e-22 | 98.2 |
| Msa0740470 | MtrunA17_Chr5g0409941 | 47.101 | 138 | 21 | 5 | 1 | 118 | 1 | 106 | 3.44e-22 | 91.3 |
| Msa0740470 | MtrunA17_Chr5g0436501 | 58.025 | 81 | 32 | 2 | 255 | 334 | 113 | 192 | 8.22e-22 | 94.7 |
| Msa0740470 | MtrunA17_Chr7g0241761 | 46.957 | 115 | 47 | 3 | 268 | 380 | 142 | 244 | 8.25e-22 | 95.9 |
| Msa0740470 | MtrunA17_Chr1g0210471 | 45.455 | 110 | 44 | 3 | 268 | 376 | 126 | 220 | 4.79e-21 | 92.0 |
| Msa0740470 | MtrunA17_Chr4g0062741 | 54.430 | 79 | 31 | 3 | 264 | 340 | 135 | 210 | 1.51e-20 | 92.0 |
| Msa0740470 | MtrunA17_Chr8g0365011 | 46.226 | 106 | 44 | 2 | 248 | 341 | 74 | 178 | 1.24e-19 | 89.0 |
| Msa0740470 | MtrunA17_Chr3g0135671 | 48.571 | 70 | 36 | 0 | 268 | 337 | 93 | 162 | 1.71e-18 | 84.3 |
| Msa0740470 | MtrunA17_Chr8g0364731 | 56.716 | 67 | 28 | 1 | 275 | 341 | 10 | 75 | 2.15e-18 | 82.8 |
| Msa0740470 | MtrunA17_Chr2g0331031 | 55.385 | 65 | 26 | 1 | 268 | 332 | 111 | 172 | 2.68e-18 | 86.3 |
| Msa0740470 | MtrunA17_Chr5g0432921 | 40.517 | 116 | 66 | 2 | 223 | 338 | 72 | 184 | 7.31e-18 | 82.4 |
| Msa0740470 | MtrunA17_Chr4g0055931 | 40.678 | 118 | 53 | 5 | 226 | 332 | 47 | 158 | 2.19e-17 | 83.2 |
| Msa0740470 | MtrunA17_Chr6g0488471 | 53.846 | 65 | 27 | 1 | 268 | 332 | 99 | 160 | 1.24e-16 | 80.1 |
| Msa0740470 | MtrunA17_Chr8g0389241 | 52.308 | 65 | 27 | 1 | 268 | 332 | 107 | 167 | 1.51e-16 | 79.7 |
| Msa0740470 | MtrunA17_Chr5g0415191 | 67.391 | 46 | 15 | 0 | 268 | 313 | 104 | 149 | 4.79e-16 | 79.0 |
| Msa0740470 | MtrunA17_Chr4g0059701 | 68.889 | 45 | 14 | 0 | 268 | 312 | 86 | 130 | 5.52e-16 | 78.2 |
| Msa0740470 | MtrunA17_Chr5g0432941 | 37.963 | 108 | 57 | 2 | 240 | 338 | 78 | 184 | 2.37e-15 | 75.1 |
| Msa0740470 | MtrunA17_Chr6g0452791 | 54.545 | 55 | 25 | 0 | 268 | 322 | 82 | 136 | 5.04e-15 | 72.8 |
| Msa0740470 | MtrunA17_Chr1g0192061 | 38.889 | 126 | 56 | 7 | 234 | 341 | 13 | 135 | 1.15e-14 | 72.4 |
| Msa0740470 | MtrunA17_Chr3g0092621 | 44.286 | 70 | 36 | 1 | 268 | 337 | 86 | 152 | 1.42e-14 | 71.6 |
| Msa0740470 | MtrunA17_Chr3g0113121 | 46.667 | 90 | 40 | 3 | 267 | 348 | 96 | 185 | 5.56e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740470 | AT5G58900.1 | 41.912 | 136 | 63 | 3 | 268 | 398 | 143 | 267 | 1.55e-23 | 100 |
| Msa0740470 | AT5G08520.1 | 58.025 | 81 | 30 | 2 | 264 | 343 | 115 | 192 | 4.42e-23 | 99.4 |
| Msa0740470 | AT5G04760.1 | 59.211 | 76 | 28 | 1 | 259 | 334 | 92 | 164 | 4.03e-22 | 94.7 |
| Msa0740470 | AT5G01200.1 | 62.857 | 70 | 22 | 2 | 268 | 336 | 148 | 214 | 1.06e-21 | 94.7 |
| Msa0740470 | AT2G38090.1 | 58.974 | 78 | 27 | 3 | 261 | 336 | 135 | 209 | 5.24e-21 | 93.6 |
| Msa0740470 | AT1G49010.1 | 54.878 | 82 | 32 | 3 | 264 | 343 | 131 | 209 | 1.37e-20 | 92.8 |
| Msa0740470 | AT5G61620.1 | 44.444 | 126 | 50 | 5 | 260 | 377 | 101 | 214 | 1.68e-19 | 89.4 |
| Msa0740470 | AT3G11280.2 | 50.000 | 94 | 38 | 3 | 268 | 357 | 129 | 217 | 7.36e-19 | 86.7 |
| Msa0740470 | AT3G11280.1 | 50.000 | 94 | 38 | 3 | 268 | 357 | 129 | 217 | 7.36e-19 | 86.7 |
| Msa0740470 | AT5G05790.2 | 56.250 | 80 | 27 | 3 | 264 | 338 | 128 | 204 | 4.95e-18 | 84.3 |
| Msa0740470 | AT5G05790.1 | 56.250 | 80 | 27 | 3 | 264 | 338 | 128 | 204 | 4.95e-18 | 84.3 |
| Msa0740470 | AT5G23650.1 | 51.316 | 76 | 34 | 1 | 268 | 343 | 122 | 194 | 5.58e-18 | 85.5 |
| Msa0740470 | AT5G47390.1 | 47.727 | 88 | 40 | 3 | 268 | 353 | 98 | 181 | 7.47e-18 | 85.5 |
| Msa0740470 | AT3G10580.2 | 39.231 | 130 | 61 | 5 | 255 | 374 | 77 | 198 | 8.41e-18 | 83.6 |
| Msa0740470 | AT3G10580.1 | 39.231 | 130 | 61 | 5 | 255 | 374 | 77 | 198 | 1.20e-17 | 83.6 |
| Msa0740470 | AT5G56840.1 | 53.846 | 65 | 28 | 1 | 268 | 332 | 93 | 155 | 1.23e-16 | 79.3 |
| Msa0740470 | AT1G70000.1 | 67.391 | 46 | 15 | 0 | 268 | 313 | 100 | 145 | 1.65e-16 | 79.7 |
| Msa0740470 | AT1G70000.2 | 67.391 | 46 | 15 | 0 | 268 | 313 | 100 | 145 | 1.65e-16 | 79.7 |
| Msa0740470 | AT4G09450.1 | 52.174 | 69 | 30 | 1 | 268 | 336 | 93 | 158 | 7.42e-16 | 76.6 |
| Msa0740470 | AT3G16350.1 | 65.217 | 46 | 16 | 0 | 268 | 313 | 139 | 184 | 9.65e-16 | 79.3 |
| Msa0740470 | AT1G19000.2 | 44.681 | 94 | 44 | 3 | 224 | 312 | 58 | 148 | 1.01e-15 | 77.8 |
| Msa0740470 | AT1G19000.1 | 44.681 | 94 | 44 | 3 | 224 | 312 | 58 | 148 | 1.01e-15 | 77.8 |
| Msa0740470 | AT1G74840.2 | 68.889 | 45 | 14 | 0 | 268 | 312 | 98 | 142 | 1.57e-15 | 76.3 |
| Msa0740470 | AT1G74840.1 | 68.889 | 45 | 14 | 0 | 268 | 312 | 98 | 142 | 2.20e-15 | 76.6 |
| Msa0740470 | AT3G10590.1 | 54.412 | 68 | 27 | 2 | 268 | 335 | 113 | 176 | 4.94e-13 | 68.6 |
Find 109 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCATATCTTTCACATTT+TGG | 0.099316 | 5_1:-59412513 | None:intergenic |
| TCACCTTGTTCTTGGATATT+TGG | 0.151843 | 5_1:-59411204 | None:intergenic |
| TCAACATGATTCATAGGTTT+TGG | 0.219569 | 5_1:-59410513 | None:intergenic |
| CCTGCTGCTGCCGGGGATAC+AGG | 0.250754 | 5_1:-59411078 | None:intergenic |
| CTGTCCAATGCCCTTTCCTT+GGG | 0.257949 | 5_1:-59412140 | None:intergenic |
| GATGTTCCTGTGTTGGTTAT+TGG | 0.258752 | 5_1:+59410453 | Msa0740470:CDS |
| CTTGGGGCATGACTTTCTTC+TGG | 0.281577 | 5_1:-59412123 | None:intergenic |
| AGAAGGAGAAAAGGAGAAAA+AGG | 0.287836 | 5_1:+59412536 | Msa0740470:CDS |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5_1:-59412898 | None:intergenic |
| TGTTGAGAATGTTTCTGTTC+AGG | 0.297487 | 5_1:+59410530 | Msa0740470:CDS |
| TCACATGGTCACCTTGTTCT+TGG | 0.300281 | 5_1:-59411212 | None:intergenic |
| TCTGTCCAATGCCCTTTCCT+TGG | 0.314383 | 5_1:-59412141 | None:intergenic |
| CTGAACATGTTTGGCATCAT+TGG | 0.316454 | 5_1:-59411127 | None:intergenic |
| TGGATATTTGGCCTTCCATT+TGG | 0.317326 | 5_1:-59411192 | None:intergenic |
| CCACCAAAATGTGAAAGATA+TGG | 0.352224 | 5_1:+59412510 | Msa0740470:CDS |
| TGAGAAGATGCGCAACTTGT+TGG | 0.359768 | 5_1:+59412915 | Msa0740470:CDS |
| CACCGGAGGCTGAACATGTT+TGG | 0.362724 | 5_1:-59411136 | None:intergenic |
| ACATTCTCAACATGATTCAT+AGG | 0.366509 | 5_1:-59410519 | None:intergenic |
| TTGGATAAAGCAACACCAAC+TGG | 0.371101 | 5_1:-59412861 | None:intergenic |
| AAACAGAAATCAAACGGTTC+TGG | 0.380690 | 5_1:+59410922 | Msa0740470:intron |
| TTTCTGTTGCGCTTGGGGCC+TGG | 0.382290 | 5_1:-59410991 | None:intergenic |
| TGCTATGCTCAGAGGGATCT+TGG | 0.382368 | 5_1:-59411966 | None:intergenic |
| AACCTTGTCCTGCTGCTGCC+GGG | 0.402092 | 5_1:-59411086 | None:intergenic |
| TTTGTGTTTCTGTTGCGCTT+GGG | 0.412088 | 5_1:-59410997 | None:intergenic |
| AAATATTTCAAAAGAATTTG+TGG | 0.425853 | 5_1:+59412438 | Msa0740470:CDS |
| TTAGTGCTCCTAAGTCTTCA+AGG | 0.427365 | 5_1:+59410400 | Msa0740470:CDS |
| ATTTGTGTTTCTGTTGCGCT+TGG | 0.430827 | 5_1:-59410998 | None:intergenic |
| TCCTTTAGTCACTGCTCCTA+TGG | 0.430956 | 5_1:+59412768 | Msa0740470:CDS |
| GGATTCTCGCCATTAGGATA+AGG | 0.435944 | 5_1:-59411051 | None:intergenic |
| TATGCTGTTAATTATCCAAA+TGG | 0.436533 | 5_1:+59411177 | Msa0740470:CDS |
| ATATGGAGAAGAAGGAGAAA+AGG | 0.437836 | 5_1:+59412527 | Msa0740470:CDS |
| GGCTTAGGATTCTCGCCATT+AGG | 0.439906 | 5_1:-59411057 | None:intergenic |
| TGTGAAAGATATGGAGAAGA+AGG | 0.441203 | 5_1:+59412519 | Msa0740470:CDS |
| GAACAACAACAGGAGAAAAC+TGG | 0.441684 | 5_1:+59411991 | Msa0740470:CDS |
| AATCGGTTCTACAATTCCTT+CGG | 0.444800 | 5_1:+59412723 | Msa0740470:CDS |
| GGTGATGGCATCTTATTCTT+CGG | 0.445274 | 5_1:-59410955 | None:intergenic |
| ATTGTTCTTGTTGTTTAAGA+TGG | 0.446908 | 5_1:-59412824 | None:intergenic |
| AAACCTTGTCCTGCTGCTGC+CGG | 0.447814 | 5_1:-59411087 | None:intergenic |
| ACCACCCGACTCAATGATAT+CGG | 0.449690 | 5_1:-59412016 | None:intergenic |
| ATGTTTGCCCTGGCAGGAAA+AGG | 0.462283 | 5_1:-59411258 | None:intergenic |
| GCGACGATGCCTTATCCTAA+TGG | 0.462440 | 5_1:+59411042 | Msa0740470:CDS |
| TTGGTGTTGCTTTATCCAAT+CGG | 0.462526 | 5_1:+59412865 | Msa0740470:CDS |
| CCTGTATCCCCGGCAGCAGC+AGG | 0.464792 | 5_1:+59411078 | Msa0740470:CDS |
| GGCTTTCGATAGCGCGGTGA+TGG | 0.464836 | 5_1:-59410970 | None:intergenic |
| GCTCATTTAAATCAATTTGA+AGG | 0.475975 | 5_1:-59411933 | None:intergenic |
| TCAAATTGATTTAAATGAGC+CGG | 0.477484 | 5_1:+59411936 | Msa0740470:CDS |
| TTGTGTTTCTGTTGCGCTTG+GGG | 0.482706 | 5_1:-59410996 | None:intergenic |
| GCATAGCATGGAACAACAAC+AGG | 0.485938 | 5_1:+59411981 | Msa0740470:CDS |
| GGTCTCTTCCTTGAAGACTT+AGG | 0.489770 | 5_1:-59410408 | None:intergenic |
| TCACCGCGCTATCGAAAGCC+AGG | 0.491564 | 5_1:+59410973 | Msa0740470:CDS |
| GCTGCCGGGGATACAGGCTT+AGG | 0.492601 | 5_1:-59411072 | None:intergenic |
| AAAGTCATGCCCCAAGGAAA+GGG | 0.493395 | 5_1:+59412130 | Msa0740470:CDS |
| ATAGGCATGTTTGCCCTGGC+AGG | 0.493753 | 5_1:-59411264 | None:intergenic |
| GAATCCTAAGCCTGTATCCC+CGG | 0.504373 | 5_1:+59411068 | Msa0740470:CDS |
| TGCCAAACATGTTCAGCCTC+CGG | 0.513848 | 5_1:+59411134 | Msa0740470:CDS |
| TAATTAACAGCATAAGCATT+CGG | 0.516489 | 5_1:-59411168 | None:intergenic |
| ATGTTGTGCTTGCTGCCAAT+CGG | 0.523993 | 5_1:+59412706 | Msa0740470:CDS |
| ATGCCCCAAGGAAAGGGCAT+TGG | 0.524782 | 5_1:+59412136 | Msa0740470:CDS |
| AGAAAGAGCTGGCCAAGACT+TGG | 0.525727 | 5_1:-59410478 | None:intergenic |
| GAAAGTCATGCCCCAAGGAA+AGG | 0.527463 | 5_1:+59412129 | Msa0740470:CDS |
| GTGATTAAACAGAAATCAAA+CGG | 0.527832 | 5_1:+59410916 | Msa0740470:intron |
| GTCTCATGTTGTTGTTCCAT+AGG | 0.529730 | 5_1:-59412784 | None:intergenic |
| TGGTTATTGGAACCAAGTCT+TGG | 0.530265 | 5_1:+59410466 | Msa0740470:CDS |
| TTGCATAGGCATGTTTGCCC+TGG | 0.530471 | 5_1:-59411268 | None:intergenic |
| GGCACCGATATCATTGAGTC+GGG | 0.531762 | 5_1:+59412012 | Msa0740470:CDS |
| CAAGGTGACCATGTGAATCA+TGG | 0.533701 | 5_1:+59411219 | Msa0740470:CDS |
| TGTTCCATGCTATGCTCAGA+GGG | 0.536332 | 5_1:-59411973 | None:intergenic |
| ATTAGAGTTTAGAATTGCAA+TGG | 0.542743 | 5_1:-59412040 | None:intergenic |
| GTCTGTTGCATTCCTTGAGG+AGG | 0.550846 | 5_1:-59412655 | None:intergenic |
| TTTAAGATGGCAGTGTCTTG+AGG | 0.553601 | 5_1:-59412811 | None:intergenic |
| GGATAAGGCATCGTCGCCAC+AGG | 0.553867 | 5_1:-59411036 | None:intergenic |
| ATTTAAATCAATTTGAAGGA+GGG | 0.554059 | 5_1:-59411929 | None:intergenic |
| TCCATAGGAGCAGTGACTAA+AGG | 0.557140 | 5_1:-59412769 | None:intergenic |
| TTCGGATCTCCTTGCACCGG+AGG | 0.558249 | 5_1:-59411150 | None:intergenic |
| TGTCCAATGCCCTTTCCTTG+GGG | 0.558952 | 5_1:-59412139 | None:intergenic |
| CATGTTCAGCCTCCGGTGCA+AGG | 0.562364 | 5_1:+59411141 | Msa0740470:CDS |
| TTGGCATCATTGGCATGAGC+AGG | 0.563369 | 5_1:-59411117 | None:intergenic |
| ACCTTGTCCTGCTGCTGCCG+GGG | 0.566255 | 5_1:-59411085 | None:intergenic |
| TTGTTCCATGCTATGCTCAG+AGG | 0.567759 | 5_1:-59411974 | None:intergenic |
| GAGGGATCTTGGACTGAAGC+CGG | 0.570243 | 5_1:-59411955 | None:intergenic |
| CATTTAAATCAATTTGAAGG+AGG | 0.570848 | 5_1:-59411930 | None:intergenic |
| TCCCCGGCAGCAGCAGGACA+AGG | 0.572616 | 5_1:+59411084 | Msa0740470:CDS |
| GCATGGCTAGCAATCTGAGT+TGG | 0.573447 | 5_1:-59412472 | None:intergenic |
| TCAGGAAGTGTAGAACCGAT+TGG | 0.577352 | 5_1:-59412880 | None:intergenic |
| GCATCATTGGCATGAGCAGG+TGG | 0.581815 | 5_1:-59411114 | None:intergenic |
| TGGCACCGATATCATTGAGT+CGG | 0.583638 | 5_1:+59412011 | Msa0740470:CDS |
| ACACTTTGTAGCTCAACTGA+AGG | 0.589388 | 5_1:-59412628 | None:intergenic |
| AAGTGTTGATGTTCCTGTGT+TGG | 0.595689 | 5_1:+59410446 | Msa0740470:CDS |
| AGATCCCTCTGAGCATAGCA+TGG | 0.596307 | 5_1:+59411969 | Msa0740470:CDS |
| TGGATAAAGCAACACCAACT+GGG | 0.597123 | 5_1:-59412860 | None:intergenic |
| GTTTGAGCATGAGAAAGAGC+TGG | 0.597278 | 5_1:-59410489 | None:intergenic |
| CTGTTAATTATCCAAATGGA+AGG | 0.601168 | 5_1:+59411181 | Msa0740470:CDS |
| GAAGGAATTGTAGAACCGAT+TGG | 0.605792 | 5_1:-59412721 | None:intergenic |
| ATTAAACAAGAATGACACAT+TGG | 0.608999 | 5_1:+59412573 | Msa0740470:CDS |
| ACCGATATCATTGAGTCGGG+TGG | 0.615037 | 5_1:+59412015 | Msa0740470:CDS |
| GCATTCGGATCTCCTTGCAC+CGG | 0.618195 | 5_1:-59411153 | None:intergenic |
| CAAAGTGTGATTCCTCCTCA+AGG | 0.618896 | 5_1:+59412643 | Msa0740470:CDS |
| ATCGTCGCCACAGGAAAGTG+AGG | 0.619216 | 5_1:-59411027 | None:intergenic |
| CAGAAGAAAGTCATGCCCCA+AGG | 0.636413 | 5_1:+59412124 | Msa0740470:CDS |
| GTGACCATGTGAATCATGGT+CGG | 0.644274 | 5_1:+59411223 | Msa0740470:CDS |
| AAGATGGCAGTGTCTTGAGG+AGG | 0.644314 | 5_1:-59412808 | None:intergenic |
| AGGCCAAATATCCAAGAACA+AGG | 0.648452 | 5_1:+59411201 | Msa0740470:CDS |
| TGACAACTTGCAAACCCAGT+TGG | 0.648867 | 5_1:+59412846 | Msa0740470:CDS |
| GGGCCTGGCTTTCGATAGCG+CGG | 0.653594 | 5_1:-59410976 | None:intergenic |
| AAGGAAAGGGCATTGGACAG+AGG | 0.658250 | 5_1:+59412143 | Msa0740470:CDS |
| TTGGTTCCAATAACCAACAC+AGG | 0.668427 | 5_1:-59410459 | None:intergenic |
| TGTGTCTGTTGCATTCCTTG+AGG | 0.673315 | 5_1:-59412658 | None:intergenic |
| TGACACGCCTCACTTTCCTG+TGG | 0.696402 | 5_1:+59411020 | Msa0740470:CDS |
| GATGCCGACCATGATTCACA+TGG | 0.766610 | 5_1:-59411227 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTTATAGTTGTATTTT+TGG | + | chr5_1:59411868-59411887 | Msa0740470:intron | 15.0% |
| !! | AAAAAATAACTTTCAAACAT+AGG | - | chr5_1:59412207-59412226 | None:intergenic | 15.0% |
| !! | AAATATTTCAAAAGAATTTG+TGG | + | chr5_1:59412438-59412457 | Msa0740470:CDS | 15.0% |
| !! | TGTTAAACTAAATGAATAAG+TGG | - | chr5_1:59411347-59411366 | None:intergenic | 20.0% |
| !! | TGAAAGTTAAGAAAATTACT+TGG | - | chr5_1:59411679-59411698 | None:intergenic | 20.0% |
| !!! | ATTTTCTTAACTTTCATGAT+TGG | + | chr5_1:59411683-59411702 | Msa0740470:intron | 20.0% |
| !!! | CATGCATAATATTTTTTGAA+TGG | - | chr5_1:59411814-59411833 | None:intergenic | 20.0% |
| !! | TTCAAAAAATATTATGCATG+TGG | + | chr5_1:59411814-59411833 | Msa0740470:intron | 20.0% |
| !! | TAATTCAAATTGGATGAAAT+TGG | + | chr5_1:59411840-59411859 | Msa0740470:intron | 20.0% |
| !! | ATTTAAATCAATTTGAAGGA+GGG | - | chr5_1:59411932-59411951 | None:intergenic | 20.0% |
| !!! | TATATATAGGTTGTTTTTGA+AGG | + | chr5_1:59412384-59412403 | Msa0740470:intron | 20.0% |
| !!! | ATATATAGGTTGTTTTTGAA+GGG | + | chr5_1:59412385-59412404 | Msa0740470:intron | 20.0% |
| !! | TTAGTGTAATGTGATTTTGA+TGG | + | chr5_1:59410617-59410636 | Msa0740470:intron | 25.0% |
| ! | TTCTTATGCTTGCAATAATA+TGG | - | chr5_1:59410698-59410717 | None:intergenic | 25.0% |
| ! | TAAACAACGAGTGAAAAATA+TGG | + | chr5_1:59410761-59410780 | Msa0740470:intron | 25.0% |
| ! | TTCTACAATATTCTTAACTC+TGG | + | chr5_1:59410847-59410866 | Msa0740470:intron | 25.0% |
| ! | TCTACAATATTCTTAACTCT+GGG | + | chr5_1:59410848-59410867 | Msa0740470:intron | 25.0% |
| ! | GTGATTAAACAGAAATCAAA+CGG | + | chr5_1:59410916-59410935 | Msa0740470:intron | 25.0% |
| ! | TAATTAACAGCATAAGCATT+CGG | - | chr5_1:59411171-59411190 | None:intergenic | 25.0% |
| ! | TATGCTGTTAATTATCCAAA+TGG | + | chr5_1:59411177-59411196 | Msa0740470:CDS | 25.0% |
| ! | ATTATGATATCTTCTCGTTA+TGG | + | chr5_1:59411628-59411647 | Msa0740470:intron | 25.0% |
| !!! | AGGCATAATTGATTTGATTA+AGG | + | chr5_1:59411722-59411741 | Msa0740470:intron | 25.0% |
| ! | CATGTGGATATAATTCAAAT+TGG | + | chr5_1:59411830-59411849 | Msa0740470:intron | 25.0% |
| !!! | TATTTTTGGTATAGAAAGCA+TGG | + | chr5_1:59411882-59411901 | Msa0740470:intron | 25.0% |
| ! | CATTTAAATCAATTTGAAGG+AGG | - | chr5_1:59411933-59411952 | None:intergenic | 25.0% |
| ! | GCTCATTTAAATCAATTTGA+AGG | - | chr5_1:59411936-59411955 | None:intergenic | 25.0% |
| !! | TCAAATTGATTTAAATGAGC+CGG | + | chr5_1:59411936-59411955 | Msa0740470:CDS | 25.0% |
| !! | ATTAGAGTTTAGAATTGCAA+TGG | - | chr5_1:59412043-59412062 | None:intergenic | 25.0% |
| ! | CACATTCATTCTCTATATAT+AGG | + | chr5_1:59412371-59412390 | Msa0740470:intron | 25.0% |
| !!! | TATATAGGTTGTTTTTGAAG+GGG | + | chr5_1:59412386-59412405 | Msa0740470:intron | 25.0% |
| !!! | TTGGTGGATAAAGTATTTTT+GGG | - | chr5_1:59412497-59412516 | None:intergenic | 25.0% |
| !!! | TTTGGTGGATAAAGTATTTT+TGG | - | chr5_1:59412498-59412517 | None:intergenic | 25.0% |
| ! | ATTAAACAAGAATGACACAT+TGG | + | chr5_1:59412573-59412592 | Msa0740470:CDS | 25.0% |
| !!! | ATTGTTCTTGTTGTTTAAGA+TGG | - | chr5_1:59412827-59412846 | None:intergenic | 25.0% |
| ! | TCAACATGATTCATAGGTTT+TGG | - | chr5_1:59410516-59410535 | None:intergenic | 30.0% |
| ACATTCTCAACATGATTCAT+AGG | - | chr5_1:59410522-59410541 | None:intergenic | 30.0% | |
| !!! | ATTGTTTTTTTTCCCTTCGA+TGG | + | chr5_1:59410810-59410829 | Msa0740470:intron | 30.0% |
| TTTAATCACAGATCCATACA+CGG | - | chr5_1:59410905-59410924 | None:intergenic | 30.0% | |
| CTGTTAATTATCCAAATGGA+AGG | + | chr5_1:59411181-59411200 | Msa0740470:CDS | 30.0% | |
| ! | GAAATTTTACTGTGTTGCAT+AGG | - | chr5_1:59411285-59411304 | None:intergenic | 30.0% |
| AATTGCATGAAGTGCATATA+TGG | - | chr5_1:59411322-59411341 | None:intergenic | 30.0% | |
| ACTCAATGAAGTTCATTCAA+AGG | - | chr5_1:59411387-59411406 | None:intergenic | 30.0% | |
| TTACTTTGATACCATTGAAG+TGG | + | chr5_1:59411559-59411578 | Msa0740470:intron | 30.0% | |
| !!! | GCATCATTTTTTGAGTAAAC+CGG | + | chr5_1:59411744-59411763 | Msa0740470:intron | 30.0% |
| !!! | CATCATTTTTTGAGTAAACC+GGG | + | chr5_1:59411745-59411764 | Msa0740470:intron | 30.0% |
| ! | TCTCCATATCTTTCACATTT+TGG | - | chr5_1:59412516-59412535 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | - | chr5_1:59412901-59412920 | None:intergenic | 30.0% |
| ! | ACACTTTTCTCTTCAACACT+AGG | - | chr5_1:59410432-59410451 | None:intergenic | 35.0% |
| ! | TGTTGAGAATGTTTCTGTTC+AGG | + | chr5_1:59410530-59410549 | Msa0740470:CDS | 35.0% |
| !! | CAGCTTTTATTTCCATCGAA+GGG | - | chr5_1:59410825-59410844 | None:intergenic | 35.0% |
| !! | ACAGCTTTTATTTCCATCGA+AGG | - | chr5_1:59410826-59410845 | None:intergenic | 35.0% |
| AAACAGAAATCAAACGGTTC+TGG | + | chr5_1:59410922-59410941 | Msa0740470:intron | 35.0% | |
| TCACCTTGTTCTTGGATATT+TGG | - | chr5_1:59411207-59411226 | None:intergenic | 35.0% | |
| ! | TCTCGTTATGGTTCTGTAAT+TGG | + | chr5_1:59411640-59411659 | Msa0740470:intron | 35.0% |
| !! | CTGTAATTGGTTTGAGTAAC+TGG | + | chr5_1:59411653-59411672 | Msa0740470:intron | 35.0% |
| ! | TTGGCTAGTTCATCTGATTA+AGG | + | chr5_1:59411702-59411721 | Msa0740470:intron | 35.0% |
| TTGAAGGGGATGAAAAAACA+TGG | + | chr5_1:59412400-59412419 | Msa0740470:CDS | 35.0% | |
| GGGATGAAAAAACATGGAAA+GGG | + | chr5_1:59412406-59412425 | Msa0740470:CDS | 35.0% | |
| !!! | GGATAAAGTATTTTTGGGCA+TGG | - | chr5_1:59412492-59412511 | None:intergenic | 35.0% |
| ! | CCATATCTTTCACATTTTGG+TGG | - | chr5_1:59412513-59412532 | None:intergenic | 35.0% |
| CCACCAAAATGTGAAAGATA+TGG | + | chr5_1:59412510-59412529 | Msa0740470:CDS | 35.0% | |
| TGTGAAAGATATGGAGAAGA+AGG | + | chr5_1:59412519-59412538 | Msa0740470:CDS | 35.0% | |
| ATATGGAGAAGAAGGAGAAA+AGG | + | chr5_1:59412527-59412546 | Msa0740470:CDS | 35.0% | |
| AGAAGGAGAAAAGGAGAAAA+AGG | + | chr5_1:59412536-59412555 | Msa0740470:CDS | 35.0% | |
| ! | AATCGGTTCTACAATTCCTT+CGG | + | chr5_1:59412723-59412742 | Msa0740470:CDS | 35.0% |
| !! | TTGGTGTTGCTTTATCCAAT+CGG | + | chr5_1:59412865-59412884 | Msa0740470:CDS | 35.0% |
| TTAGTGCTCCTAAGTCTTCA+AGG | + | chr5_1:59410400-59410419 | Msa0740470:CDS | 40.0% | |
| !! | AAGTGTTGATGTTCCTGTGT+TGG | + | chr5_1:59410446-59410465 | Msa0740470:CDS | 40.0% |
| !! | GATGTTCCTGTGTTGGTTAT+TGG | + | chr5_1:59410453-59410472 | Msa0740470:CDS | 40.0% |
| TTGGTTCCAATAACCAACAC+AGG | - | chr5_1:59410462-59410481 | None:intergenic | 40.0% | |
| TGGTTATTGGAACCAAGTCT+TGG | + | chr5_1:59410466-59410485 | Msa0740470:CDS | 40.0% | |
| GCGAGTCAACAAATCTGTTT+AGG | + | chr5_1:59410783-59410802 | Msa0740470:intron | 40.0% | |
| ! | TTTGCCTGATTTTCCGTGTA+TGG | + | chr5_1:59410889-59410908 | Msa0740470:intron | 40.0% |
| AGATCCATACACGGAAAATC+AGG | - | chr5_1:59410896-59410915 | None:intergenic | 40.0% | |
| ! | GGTGATGGCATCTTATTCTT+CGG | - | chr5_1:59410958-59410977 | None:intergenic | 40.0% |
| ! | TTTGTGTTTCTGTTGCGCTT+GGG | - | chr5_1:59411000-59411019 | None:intergenic | 40.0% |
| ! | ATTTGTGTTTCTGTTGCGCT+TGG | - | chr5_1:59411001-59411020 | None:intergenic | 40.0% |
| CTGAACATGTTTGGCATCAT+TGG | - | chr5_1:59411130-59411149 | None:intergenic | 40.0% | |
| ! | TGGATATTTGGCCTTCCATT+TGG | - | chr5_1:59411195-59411214 | None:intergenic | 40.0% |
| AGGCCAAATATCCAAGAACA+AGG | + | chr5_1:59411201-59411220 | Msa0740470:CDS | 40.0% | |
| TGCATGAAGTGCATATATGG+AGG | - | chr5_1:59411319-59411338 | None:intergenic | 40.0% | |
| !! | AAGATTCTAGCTTAACCCTC+TGG | + | chr5_1:59411477-59411496 | Msa0740470:intron | 40.0% |
| !!! | TTAACCCTCTGGTGCTTTTT+TGG | + | chr5_1:59411488-59411507 | Msa0740470:intron | 40.0% |
| !!! | TAACCCTCTGGTGCTTTTTT+GGG | + | chr5_1:59411489-59411508 | Msa0740470:intron | 40.0% |
| !! | ATACCCAAAAAAGCACCAGA+GGG | - | chr5_1:59411495-59411514 | None:intergenic | 40.0% |
| !! | AATACCCAAAAAAGCACCAG+AGG | - | chr5_1:59411496-59411515 | None:intergenic | 40.0% |
| GCAACTAAAAGCCACTTCAA+TGG | - | chr5_1:59411573-59411592 | None:intergenic | 40.0% | |
| GAACAACAACAGGAGAAAAC+TGG | + | chr5_1:59411991-59412010 | Msa0740470:CDS | 40.0% | |
| GGGGATGAAAAAACATGGAA+AGG | + | chr5_1:59412405-59412424 | Msa0740470:CDS | 40.0% | |
| ACACTTTGTAGCTCAACTGA+AGG | - | chr5_1:59412631-59412650 | None:intergenic | 40.0% | |
| GAAGGAATTGTAGAACCGAT+TGG | - | chr5_1:59412724-59412743 | None:intergenic | 40.0% | |
| ! | GTCTCATGTTGTTGTTCCAT+AGG | - | chr5_1:59412787-59412806 | None:intergenic | 40.0% |
| ! | TTTAAGATGGCAGTGTCTTG+AGG | - | chr5_1:59412814-59412833 | None:intergenic | 40.0% |
| TGGATAAAGCAACACCAACT+GGG | - | chr5_1:59412863-59412882 | None:intergenic | 40.0% | |
| TTGGATAAAGCAACACCAAC+TGG | - | chr5_1:59412864-59412883 | None:intergenic | 40.0% | |
| GGTCTCTTCCTTGAAGACTT+AGG | - | chr5_1:59410411-59410430 | None:intergenic | 45.0% | |
| GTTTGAGCATGAGAAAGAGC+TGG | - | chr5_1:59410492-59410511 | None:intergenic | 45.0% | |
| ! | TTGTGTTTCTGTTGCGCTTG+GGG | - | chr5_1:59410999-59411018 | None:intergenic | 45.0% |
| GGATTCTCGCCATTAGGATA+AGG | - | chr5_1:59411054-59411073 | None:intergenic | 45.0% | |
| TCACATGGTCACCTTGTTCT+TGG | - | chr5_1:59411215-59411234 | None:intergenic | 45.0% | |
| CAAGGTGACCATGTGAATCA+TGG | + | chr5_1:59411219-59411238 | Msa0740470:CDS | 45.0% | |
| GTGACCATGTGAATCATGGT+CGG | + | chr5_1:59411223-59411242 | Msa0740470:CDS | 45.0% | |
| ! | ATCAAAGACCTTTTCCTGCC+AGG | + | chr5_1:59411250-59411269 | Msa0740470:CDS | 45.0% |
| ! | TCAAAGACCTTTTCCTGCCA+GGG | + | chr5_1:59411251-59411270 | Msa0740470:CDS | 45.0% |
| TGTTCCATGCTATGCTCAGA+GGG | - | chr5_1:59411976-59411995 | None:intergenic | 45.0% | |
| TTGTTCCATGCTATGCTCAG+AGG | - | chr5_1:59411977-59411996 | None:intergenic | 45.0% | |
| GCATAGCATGGAACAACAAC+AGG | + | chr5_1:59411981-59412000 | Msa0740470:CDS | 45.0% | |
| !! | TGGCACCGATATCATTGAGT+CGG | + | chr5_1:59412011-59412030 | Msa0740470:CDS | 45.0% |
| ACCACCCGACTCAATGATAT+CGG | - | chr5_1:59412019-59412038 | None:intergenic | 45.0% | |
| AAAGTCATGCCCCAAGGAAA+GGG | + | chr5_1:59412130-59412149 | Msa0740470:CDS | 45.0% | |
| AAAAACATGGAAAGGGACGC+TGG | + | chr5_1:59412413-59412432 | Msa0740470:CDS | 45.0% | |
| CAAAGTGTGATTCCTCCTCA+AGG | + | chr5_1:59412643-59412662 | Msa0740470:CDS | 45.0% | |
| TGTGTCTGTTGCATTCCTTG+AGG | - | chr5_1:59412661-59412680 | None:intergenic | 45.0% | |
| ! | ATGTTGTGCTTGCTGCCAAT+CGG | + | chr5_1:59412706-59412725 | Msa0740470:CDS | 45.0% |
| !! | TCGTTTTGTTGCTCAACCGA+AGG | - | chr5_1:59412742-59412761 | None:intergenic | 45.0% |
| TCCTTTAGTCACTGCTCCTA+TGG | + | chr5_1:59412768-59412787 | Msa0740470:CDS | 45.0% | |
| TCCATAGGAGCAGTGACTAA+AGG | - | chr5_1:59412772-59412791 | None:intergenic | 45.0% | |
| TGACAACTTGCAAACCCAGT+TGG | + | chr5_1:59412846-59412865 | Msa0740470:CDS | 45.0% | |
| ! | TCAGGAAGTGTAGAACCGAT+TGG | - | chr5_1:59412883-59412902 | None:intergenic | 45.0% |
| TGAGAAGATGCGCAACTTGT+TGG | + | chr5_1:59412915-59412934 | Msa0740470:CDS | 45.0% | |
| AGAAAGAGCTGGCCAAGACT+TGG | - | chr5_1:59410481-59410500 | None:intergenic | 50.0% | |
| GCGACGATGCCTTATCCTAA+TGG | + | chr5_1:59411042-59411061 | Msa0740470:CDS | 50.0% | |
| GGCTTAGGATTCTCGCCATT+AGG | - | chr5_1:59411060-59411079 | None:intergenic | 50.0% | |
| GAATCCTAAGCCTGTATCCC+CGG | + | chr5_1:59411068-59411087 | Msa0740470:CDS | 50.0% | |
| TTGGCATCATTGGCATGAGC+AGG | - | chr5_1:59411120-59411139 | None:intergenic | 50.0% | |
| TGCCAAACATGTTCAGCCTC+CGG | + | chr5_1:59411134-59411153 | Msa0740470:CDS | 50.0% | |
| GATGCCGACCATGATTCACA+TGG | - | chr5_1:59411230-59411249 | None:intergenic | 50.0% | |
| ATGTTTGCCCTGGCAGGAAA+AGG | - | chr5_1:59411261-59411280 | None:intergenic | 50.0% | |
| TTGCATAGGCATGTTTGCCC+TGG | - | chr5_1:59411271-59411290 | None:intergenic | 50.0% | |
| TGAGTAAACCGGGTGATGCT+AGG | + | chr5_1:59411755-59411774 | Msa0740470:intron | 50.0% | |
| GAGTAAACCGGGTGATGCTA+GGG | + | chr5_1:59411756-59411775 | Msa0740470:intron | 50.0% | |
| TCTTAGTCCCTAGCATCACC+CGG | - | chr5_1:59411766-59411785 | None:intergenic | 50.0% | |
| TGCTATGCTCAGAGGGATCT+TGG | - | chr5_1:59411969-59411988 | None:intergenic | 50.0% | |
| AGATCCCTCTGAGCATAGCA+TGG | + | chr5_1:59411969-59411988 | Msa0740470:CDS | 50.0% | |
| !! | GGCACCGATATCATTGAGTC+GGG | + | chr5_1:59412012-59412031 | Msa0740470:CDS | 50.0% |
| ACCGATATCATTGAGTCGGG+TGG | + | chr5_1:59412015-59412034 | Msa0740470:CDS | 50.0% | |
| CTTGGGGCATGACTTTCTTC+TGG | - | chr5_1:59412126-59412145 | None:intergenic | 50.0% | |
| CAGAAGAAAGTCATGCCCCA+AGG | + | chr5_1:59412124-59412143 | Msa0740470:CDS | 50.0% | |
| GAAAGTCATGCCCCAAGGAA+AGG | + | chr5_1:59412129-59412148 | Msa0740470:CDS | 50.0% | |
| TGTCCAATGCCCTTTCCTTG+GGG | - | chr5_1:59412142-59412161 | None:intergenic | 50.0% | |
| CTGTCCAATGCCCTTTCCTT+GGG | - | chr5_1:59412143-59412162 | None:intergenic | 50.0% | |
| TCTGTCCAATGCCCTTTCCT+TGG | - | chr5_1:59412144-59412163 | None:intergenic | 50.0% | |
| !! | AAGGAAAGGGCATTGGACAG+AGG | + | chr5_1:59412143-59412162 | Msa0740470:CDS | 50.0% |
| GCATGGCTAGCAATCTGAGT+TGG | - | chr5_1:59412475-59412494 | None:intergenic | 50.0% | |
| GTCTGTTGCATTCCTTGAGG+AGG | - | chr5_1:59412658-59412677 | None:intergenic | 50.0% | |
| AAGATGGCAGTGTCTTGAGG+AGG | - | chr5_1:59412811-59412830 | None:intergenic | 50.0% | |
| TGACACGCCTCACTTTCCTG+TGG | + | chr5_1:59411020-59411039 | Msa0740470:CDS | 55.0% | |
| ATCGTCGCCACAGGAAAGTG+AGG | - | chr5_1:59411030-59411049 | None:intergenic | 55.0% | |
| AAACCTTGTCCTGCTGCTGC+CGG | - | chr5_1:59411090-59411109 | None:intergenic | 55.0% | |
| GCATCATTGGCATGAGCAGG+TGG | - | chr5_1:59411117-59411136 | None:intergenic | 55.0% | |
| CACCGGAGGCTGAACATGTT+TGG | - | chr5_1:59411139-59411158 | None:intergenic | 55.0% | |
| GCATTCGGATCTCCTTGCAC+CGG | - | chr5_1:59411156-59411175 | None:intergenic | 55.0% | |
| ATAGGCATGTTTGCCCTGGC+AGG | - | chr5_1:59411267-59411286 | None:intergenic | 55.0% | |
| GAGGGATCTTGGACTGAAGC+CGG | - | chr5_1:59411958-59411977 | None:intergenic | 55.0% | |
| ! | ATGCCCCAAGGAAAGGGCAT+TGG | + | chr5_1:59412136-59412155 | Msa0740470:CDS | 55.0% |
| GGCTTTCGATAGCGCGGTGA+TGG | - | chr5_1:59410973-59410992 | None:intergenic | 60.0% | |
| TCACCGCGCTATCGAAAGCC+AGG | + | chr5_1:59410973-59410992 | Msa0740470:CDS | 60.0% | |
| TTTCTGTTGCGCTTGGGGCC+TGG | - | chr5_1:59410994-59411013 | None:intergenic | 60.0% | |
| !! | GGATAAGGCATCGTCGCCAC+AGG | - | chr5_1:59411039-59411058 | None:intergenic | 60.0% |
| AACCTTGTCCTGCTGCTGCC+GGG | - | chr5_1:59411089-59411108 | None:intergenic | 60.0% | |
| CATGTTCAGCCTCCGGTGCA+AGG | + | chr5_1:59411141-59411160 | Msa0740470:CDS | 60.0% | |
| TTCGGATCTCCTTGCACCGG+AGG | - | chr5_1:59411153-59411172 | None:intergenic | 60.0% | |
| ! | GGGCCTGGCTTTCGATAGCG+CGG | - | chr5_1:59410979-59410998 | None:intergenic | 65.0% |
| GCTGCCGGGGATACAGGCTT+AGG | - | chr5_1:59411075-59411094 | None:intergenic | 65.0% | |
| ACCTTGTCCTGCTGCTGCCG+GGG | - | chr5_1:59411088-59411107 | None:intergenic | 65.0% | |
| CCTGCTGCTGCCGGGGATAC+AGG | - | chr5_1:59411081-59411100 | None:intergenic | 70.0% | |
| CCTGTATCCCCGGCAGCAGC+AGG | + | chr5_1:59411078-59411097 | Msa0740470:CDS | 70.0% | |
| TCCCCGGCAGCAGCAGGACA+AGG | + | chr5_1:59411084-59411103 | Msa0740470:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 59410378 | 59412951 | 59410378 | ID=Msa0740470;Name=Msa0740470 |
| chr5_1 | mRNA | 59410378 | 59412951 | 59410378 | ID=Msa0740470-mRNA-1;Parent=Msa0740470;Name=Msa0740470-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|1|1|4|0|459 |
| chr5_1 | exon | 59410378 | 59410551 | 59410378 | ID=Msa0740470-mRNA-1:exon:17111;Parent=Msa0740470-mRNA-1 |
| chr5_1 | exon | 59410928 | 59411294 | 59410928 | ID=Msa0740470-mRNA-1:exon:17112;Parent=Msa0740470-mRNA-1 |
| chr5_1 | exon | 59411896 | 59412175 | 59411896 | ID=Msa0740470-mRNA-1:exon:17113;Parent=Msa0740470-mRNA-1 |
| chr5_1 | exon | 59412393 | 59412951 | 59412393 | ID=Msa0740470-mRNA-1:exon:17114;Parent=Msa0740470-mRNA-1 |
| chr5_1 | CDS | 59410378 | 59410551 | 59410378 | ID=Msa0740470-mRNA-1:cds;Parent=Msa0740470-mRNA-1 |
| chr5_1 | CDS | 59410928 | 59411294 | 59410928 | ID=Msa0740470-mRNA-1:cds;Parent=Msa0740470-mRNA-1 |
| chr5_1 | CDS | 59411896 | 59412175 | 59411896 | ID=Msa0740470-mRNA-1:cds;Parent=Msa0740470-mRNA-1 |
| chr5_1 | CDS | 59412393 | 59412951 | 59412393 | ID=Msa0740470-mRNA-1:cds;Parent=Msa0740470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
