Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0742930 | XP_003600003.2 | 67.589 | 253 | 29 | 4 | 17 | 229 | 3 | 242 | 5.35e-107 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0742930 | sp|Q9LT81|C3H39_ARATH | 27.245 | 323 | 103 | 11 | 21 | 218 | 61 | 376 | 3.85e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0742930 | G7J1X0 | 67.589 | 253 | 29 | 4 | 17 | 229 | 3 | 242 | 2.55e-107 | 318 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0742930 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0742930 | MtrunA17_Chr3g0098251 | 65.608 | 189 | 16 | 3 | 17 | 169 | 3 | 178 | 2.06e-79 | 237 |
| Msa0742930 | MtrunA17_Chr4g0063401 | 42.797 | 236 | 60 | 7 | 3 | 168 | 17 | 247 | 1.58e-48 | 159 |
| Msa0742930 | MtrunA17_Chr4g0063371 | 43.265 | 245 | 95 | 10 | 1 | 215 | 1 | 231 | 1.77e-45 | 151 |
| Msa0742930 | MtrunA17_Chr4g0063361 | 40.678 | 236 | 71 | 7 | 3 | 174 | 17 | 247 | 2.06e-45 | 151 |
| Msa0742930 | MtrunA17_Chr8g0360671 | 55.474 | 137 | 6 | 2 | 71 | 169 | 40 | 159 | 4.46e-42 | 140 |
| Msa0742930 | MtrunA17_Chr4g0063391 | 39.151 | 212 | 79 | 7 | 1 | 167 | 1 | 207 | 7.77e-35 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0742930 | AT3G19360.1 | 27.245 | 323 | 103 | 11 | 21 | 218 | 61 | 376 | 3.92e-24 | 99.4 |
| Msa0742930 | AT3G19360.2 | 27.245 | 323 | 103 | 11 | 21 | 218 | 61 | 376 | 3.92e-24 | 99.4 |
Find 74 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGAATGGATGCAGTTTC+TGG | 0.186612 | 5_1:-63078741 | Msa0742930:CDS |
| TTCCAGTAAGTGCCCCTTGC+TGG | 0.303703 | 5_1:+63078518 | None:intergenic |
| CTCCTCTGCACTTGGCAACT+TGG | 0.319220 | 5_1:+63077151 | None:intergenic |
| ATTCTTGGCCTCTTGTTCAT+TGG | 0.325984 | 5_1:+63078971 | None:intergenic |
| TTTGCCGCACCTAGATTTAC+TGG | 0.340449 | 5_1:+63077278 | None:intergenic |
| CTCTTGTTCATTGGAAATTG+AGG | 0.348272 | 5_1:+63078980 | None:intergenic |
| AGCCAGCAAGGGGCACTTAC+TGG | 0.351537 | 5_1:-63078520 | Msa0742930:CDS |
| ATATATGCTGATTGGATTGA+TGG | 0.352618 | 5_1:-63077191 | Msa0742930:CDS |
| CACTATGGTCATGGAGAAAC+AGG | 0.358530 | 5_1:-63078431 | Msa0742930:intron |
| CTAATAATTTGGAAGGCAAT+AGG | 0.358885 | 5_1:-63078553 | Msa0742930:intron |
| TAAGGCAGCCACCGCCGAAT+TGG | 0.369861 | 5_1:-63078787 | Msa0742930:CDS |
| AAGATATCGTTGTGGCGGTC+TGG | 0.379483 | 5_1:+63079013 | None:intergenic |
| AAACAAAGAGATGTCCCTTT+GGG | 0.390115 | 5_1:-63078463 | Msa0742930:CDS |
| CATGTTTCTTTGTTTGATGC+AGG | 0.393704 | 5_1:+63078911 | None:intergenic |
| TTTGGGGAGGACTGTCACTA+TGG | 0.414198 | 5_1:-63078446 | Msa0742930:CDS |
| TCCTCTGCACTTGGCAACTT+GGG | 0.415609 | 5_1:+63077152 | None:intergenic |
| TCTTGTTCATTGGAAATTGA+GGG | 0.440821 | 5_1:+63078981 | None:intergenic |
| TCAATACTATATATGCTGAT+TGG | 0.453146 | 5_1:-63077199 | Msa0742930:CDS |
| AATGGTGAGGAATGTCCTTA+TGG | 0.454214 | 5_1:-63078668 | Msa0742930:intron |
| CAGAAAATCATCCACAAGAT+GGG | 0.460278 | 5_1:-63078710 | Msa0742930:CDS |
| CCAGCTAGCTCCTTCCAATT+CGG | 0.468873 | 5_1:+63078773 | None:intergenic |
| CCATTGTAGTATTTCTTGCA+TGG | 0.471485 | 5_1:+63078686 | None:intergenic |
| CTGGCCCTCGCAACGAGGAA+TGG | 0.475242 | 5_1:-63078754 | Msa0742930:CDS |
| CTAAGAAGAAGCGTTTACTT+TGG | 0.481385 | 5_1:-63077241 | Msa0742930:CDS |
| CTCACGGGGTTGGTGAGATA+AGG | 0.482058 | 5_1:-63078805 | Msa0742930:CDS |
| CAAACAAAGAGATGTCCCTT+TGG | 0.488330 | 5_1:-63078464 | Msa0742930:CDS |
| TAGGTACAATGTTCACCTTT+CGG | 0.492110 | 5_1:+63078830 | None:intergenic |
| AGCTCCTTCCAATTCGGCGG+TGG | 0.493403 | 5_1:+63078779 | None:intergenic |
| ACCTAGATTTACTGGGATGC+TGG | 0.499172 | 5_1:+63077286 | None:intergenic |
| TCTTGCATGGCCCCATCTTG+TGG | 0.502722 | 5_1:+63078699 | None:intergenic |
| ACTCAAATCTCCTCTGCACT+TGG | 0.503462 | 5_1:+63077143 | None:intergenic |
| CCGAATTGGAAGGAGCTAGC+TGG | 0.508894 | 5_1:-63078773 | Msa0742930:CDS |
| AACATTGTACCTATGCTCAC+GGG | 0.508915 | 5_1:-63078820 | Msa0742930:CDS |
| TCAGAAAATCATCCACAAGA+TGG | 0.509619 | 5_1:-63078711 | Msa0742930:CDS |
| GATGCTGGTAGGTGCATCAT+TGG | 0.510548 | 5_1:+63077301 | None:intergenic |
| GTTTCTTTGTTTGATGCAGG+AGG | 0.513521 | 5_1:+63078914 | None:intergenic |
| TGCGGCAAAGGAAGAGGTGC+AGG | 0.513857 | 5_1:-63077264 | Msa0742930:CDS |
| ACCAGCATCCCAGTAAATCT+AGG | 0.516358 | 5_1:-63077287 | Msa0742930:CDS |
| TGTTTGCTGCCACATGGAAG+TGG | 0.525484 | 5_1:+63078481 | None:intergenic |
| TTGCCGCACCTAGATTTACT+GGG | 0.530568 | 5_1:+63077279 | None:intergenic |
| CTCAATTTCCAATGAACAAG+AGG | 0.531554 | 5_1:-63078979 | Msa0742930:CDS |
| TCTAGGTGCGGCAAAGGAAG+AGG | 0.531942 | 5_1:-63077270 | Msa0742930:CDS |
| GCAGCCACCGCCGAATTGGA+AGG | 0.538802 | 5_1:-63078783 | Msa0742930:CDS |
| GTCTGTGAACAAGCCAGCAA+GGG | 0.545575 | 5_1:-63078531 | Msa0742930:CDS |
| TGTACCTATGCTCACGGGGT+TGG | 0.546278 | 5_1:-63078815 | Msa0742930:CDS |
| TTTCTTTGTTTGATGCAGGA+GGG | 0.548120 | 5_1:+63078915 | None:intergenic |
| AGTAAATCTAGGTGCGGCAA+AGG | 0.550780 | 5_1:-63077276 | Msa0742930:CDS |
| GGTCTGTGAACAAGCCAGCA+AGG | 0.553295 | 5_1:-63078532 | Msa0742930:CDS |
| TAGTGACAGTCCTCCCCAAA+GGG | 0.553368 | 5_1:+63078449 | None:intergenic |
| TCTCTTTGTTTGCTGCCACA+TGG | 0.555148 | 5_1:+63078475 | None:intergenic |
| GCATCCATTCCTCGTTGCGA+GGG | 0.558892 | 5_1:+63078750 | None:intergenic |
| GAGGACTGTCACTATGGTCA+TGG | 0.559170 | 5_1:-63078440 | Msa0742930:CDS |
| TGCATCCATTCCTCGTTGCG+AGG | 0.561819 | 5_1:+63078749 | None:intergenic |
| AAGTTTGGTAATTGTCCGAA+AGG | 0.565778 | 5_1:-63078845 | Msa0742930:CDS |
| AGGAGGGCATATGAATGCAT+TGG | 0.578880 | 5_1:+63078931 | None:intergenic |
| GAACATTGTACCTATGCTCA+CGG | 0.579167 | 5_1:-63078821 | Msa0742930:CDS |
| GGCAACTTGGGAACAACAAG+AGG | 0.595878 | 5_1:+63077164 | None:intergenic |
| TCCCAAGTTGCCAAGTGCAG+AGG | 0.600962 | 5_1:-63077153 | Msa0742930:CDS |
| AGATTTACTGGGATGCTGGT+AGG | 0.604255 | 5_1:+63077290 | None:intergenic |
| CTCACCAACCCCGTGAGCAT+AGG | 0.617079 | 5_1:+63078811 | None:intergenic |
| GCTAGCTCCTTCCAATTCGG+CGG | 0.629242 | 5_1:+63078776 | None:intergenic |
| AGAAAATCATCCACAAGATG+GGG | 0.631611 | 5_1:-63078709 | Msa0742930:CDS |
| CTTCGAAGATATCGTTGTGG+CGG | 0.642878 | 5_1:+63079008 | None:intergenic |
| ATAGTGACAGTCCTCCCCAA+AGG | 0.646765 | 5_1:+63078448 | None:intergenic |
| AACAAAGAGATGTCCCTTTG+GGG | 0.647087 | 5_1:-63078462 | Msa0742930:CDS |
| TTGCTTCGAAGATATCGTTG+TGG | 0.652662 | 5_1:+63079005 | None:intergenic |
| AAAGAGATGTCCCTTTGGGG+AGG | 0.659239 | 5_1:-63078459 | Msa0742930:CDS |
| CAAGAAATACTACAATGGTG+AGG | 0.666991 | 5_1:-63078681 | Msa0742930:CDS |
| TCTGTGAACAAGCCAGCAAG+GGG | 0.667598 | 5_1:-63078530 | Msa0742930:CDS |
| GCTAGCTGGCCCTCGCAACG+AGG | 0.671934 | 5_1:-63078759 | Msa0742930:CDS |
| CCATGCAAGAAATACTACAA+TGG | 0.672367 | 5_1:-63078686 | Msa0742930:CDS |
| CATCCCAGTAAATCTAGGTG+CGG | 0.679945 | 5_1:-63077282 | Msa0742930:CDS |
| ACATTGTACCTATGCTCACG+GGG | 0.692970 | 5_1:-63078819 | Msa0742930:CDS |
| AGCTGTGTTCCACTTCCATG+TGG | 0.702956 | 5_1:-63078490 | Msa0742930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATAAGTTCAAGTT+TGG | - | chr5_1:63077307-63077326 | Msa0742930:CDS | 20.0% |
| !!! | ATAATTCTACTGTTTTGTTT+TGG | - | chr5_1:63077791-63077810 | Msa0742930:intron | 20.0% |
| !! | TTAATATGATCAATTACCTT+AGG | + | chr5_1:63077976-63077995 | None:intergenic | 20.0% |
| !! | AGGTAATTGATCATATTAAA+TGG | - | chr5_1:63077977-63077996 | Msa0742930:intron | 20.0% |
| !! | TTATAACAATCAAAACTGTT+TGG | - | chr5_1:63078784-63078803 | Msa0742930:CDS | 20.0% |
| !!! | ATTTTTCATAAGTTCAAGTT+TGG | - | chr5_1:63077307-63077326 | Msa0742930:CDS | 20.0% |
| !!! | ATAATTCTACTGTTTTGTTT+TGG | - | chr5_1:63077791-63077810 | Msa0742930:intron | 20.0% |
| !! | TTAATATGATCAATTACCTT+AGG | + | chr5_1:63077976-63077995 | None:intergenic | 20.0% |
| !! | AGGTAATTGATCATATTAAA+TGG | - | chr5_1:63077977-63077996 | Msa0742930:intron | 20.0% |
| !! | TTATAACAATCAAAACTGTT+TGG | - | chr5_1:63078784-63078803 | Msa0742930:CDS | 20.0% |
| !! | TGATTGTTTTCAGAAATTCT+TGG | + | chr5_1:63077214-63077233 | None:intergenic | 25.0% |
| !! | ATAAGAGTAGTTTTCTTCAT+AGG | - | chr5_1:63077524-63077543 | Msa0742930:intron | 25.0% |
| ! | GAAACAGGTAATGATAATAA+TGG | - | chr5_1:63077751-63077770 | Msa0742930:intron | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | - | chr5_1:63078968-63078987 | Msa0742930:CDS | 25.0% |
| !! | TGATTGTTTTCAGAAATTCT+TGG | + | chr5_1:63077214-63077233 | None:intergenic | 25.0% |
| !! | ATAAGAGTAGTTTTCTTCAT+AGG | - | chr5_1:63077524-63077543 | Msa0742930:intron | 25.0% |
| ! | GAAACAGGTAATGATAATAA+TGG | - | chr5_1:63077751-63077770 | Msa0742930:intron | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | - | chr5_1:63078968-63078987 | Msa0742930:CDS | 25.0% |
| TCTTGTTCATTGGAAATTGA+GGG | + | chr5_1:63077189-63077208 | None:intergenic | 30.0% | |
| AAACTACTCTTATCACCATA+AGG | + | chr5_1:63077517-63077536 | None:intergenic | 30.0% | |
| ! | TAGTTTTCTTCATAGGCTTA+GGG | - | chr5_1:63077531-63077550 | Msa0742930:intron | 30.0% |
| TGATTCTTGAAAATCAAGAG+AGG | - | chr5_1:63077555-63077574 | Msa0742930:intron | 30.0% | |
| !! | GATGGTTCTAATAATTTGGA+AGG | - | chr5_1:63077607-63077626 | Msa0742930:intron | 30.0% |
| CTAATAATTTGGAAGGCAAT+AGG | - | chr5_1:63077614-63077633 | Msa0742930:intron | 30.0% | |
| GGTAATGATAATAATGGTCT+TGG | - | chr5_1:63077757-63077776 | Msa0742930:intron | 30.0% | |
| TTATAGTGTTTGATTGTGTG+TGG | - | chr5_1:63077894-63077913 | Msa0742930:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | - | chr5_1:63077928-63077947 | Msa0742930:intron | 30.0% |
| TATGATCAATTACCTTAGGA+GGG | + | chr5_1:63077972-63077991 | None:intergenic | 30.0% | |
| ATATGATCAATTACCTTAGG+AGG | + | chr5_1:63077973-63077992 | None:intergenic | 30.0% | |
| ! | GTATTTAGTTCATTCATCAG+AGG | - | chr5_1:63078052-63078071 | Msa0742930:intron | 30.0% |
| TTGTTGTCAATTGTAGATCA+CGG | - | chr5_1:63078339-63078358 | Msa0742930:intron | 30.0% | |
| TGTCTGACTCATCAATAATT+TGG | - | chr5_1:63078543-63078562 | Msa0742930:intron | 30.0% | |
| !!! | CATTGCAAGGTTTTAAATAG+TGG | - | chr5_1:63078578-63078597 | Msa0742930:intron | 30.0% |
| TATGTTTGACTGCAACATTA+CGG | + | chr5_1:63078616-63078635 | None:intergenic | 30.0% | |
| ! | ATATATGCTGATTGGATTGA+TGG | - | chr5_1:63078976-63078995 | Msa0742930:CDS | 30.0% |
| TCTTGTTCATTGGAAATTGA+GGG | + | chr5_1:63077189-63077208 | None:intergenic | 30.0% | |
| AAACTACTCTTATCACCATA+AGG | + | chr5_1:63077517-63077536 | None:intergenic | 30.0% | |
| ! | TAGTTTTCTTCATAGGCTTA+GGG | - | chr5_1:63077531-63077550 | Msa0742930:intron | 30.0% |
| TGATTCTTGAAAATCAAGAG+AGG | - | chr5_1:63077555-63077574 | Msa0742930:intron | 30.0% | |
| !! | GATGGTTCTAATAATTTGGA+AGG | - | chr5_1:63077607-63077626 | Msa0742930:intron | 30.0% |
| CTAATAATTTGGAAGGCAAT+AGG | - | chr5_1:63077614-63077633 | Msa0742930:intron | 30.0% | |
| GGTAATGATAATAATGGTCT+TGG | - | chr5_1:63077757-63077776 | Msa0742930:intron | 30.0% | |
| TTATAGTGTTTGATTGTGTG+TGG | - | chr5_1:63077894-63077913 | Msa0742930:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | - | chr5_1:63077928-63077947 | Msa0742930:intron | 30.0% |
| TATGATCAATTACCTTAGGA+GGG | + | chr5_1:63077972-63077991 | None:intergenic | 30.0% | |
| ATATGATCAATTACCTTAGG+AGG | + | chr5_1:63077973-63077992 | None:intergenic | 30.0% | |
| ! | GTATTTAGTTCATTCATCAG+AGG | - | chr5_1:63078052-63078071 | Msa0742930:intron | 30.0% |
| TTGTTGTCAATTGTAGATCA+CGG | - | chr5_1:63078339-63078358 | Msa0742930:intron | 30.0% | |
| TGTCTGACTCATCAATAATT+TGG | - | chr5_1:63078543-63078562 | Msa0742930:intron | 30.0% | |
| !!! | CATTGCAAGGTTTTAAATAG+TGG | - | chr5_1:63078578-63078597 | Msa0742930:intron | 30.0% |
| TATGTTTGACTGCAACATTA+CGG | + | chr5_1:63078616-63078635 | None:intergenic | 30.0% | |
| ! | ATATATGCTGATTGGATTGA+TGG | - | chr5_1:63078976-63078995 | Msa0742930:CDS | 30.0% |
| CTCTTGTTCATTGGAAATTG+AGG | + | chr5_1:63077190-63077209 | None:intergenic | 35.0% | |
| CTCAATTTCCAATGAACAAG+AGG | - | chr5_1:63077188-63077207 | Msa0742930:CDS | 35.0% | |
| ! | TTTCTTTGTTTGATGCAGGA+GGG | + | chr5_1:63077255-63077274 | None:intergenic | 35.0% |
| ! | CATGTTTCTTTGTTTGATGC+AGG | + | chr5_1:63077259-63077278 | None:intergenic | 35.0% |
| ! | AAGTTTGGTAATTGTCCGAA+AGG | - | chr5_1:63077322-63077341 | Msa0742930:intron | 35.0% |
| TAGGTACAATGTTCACCTTT+CGG | + | chr5_1:63077340-63077359 | None:intergenic | 35.0% | |
| TCAGAAAATCATCCACAAGA+TGG | - | chr5_1:63077456-63077475 | Msa0742930:intron | 35.0% | |
| CAGAAAATCATCCACAAGAT+GGG | - | chr5_1:63077457-63077476 | Msa0742930:intron | 35.0% | |
| AGAAAATCATCCACAAGATG+GGG | - | chr5_1:63077458-63077477 | Msa0742930:intron | 35.0% | |
| CCATTGTAGTATTTCTTGCA+TGG | + | chr5_1:63077484-63077503 | None:intergenic | 35.0% | |
| CCATGCAAGAAATACTACAA+TGG | - | chr5_1:63077481-63077500 | Msa0742930:intron | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr5_1:63077486-63077505 | Msa0742930:intron | 35.0% | |
| ! | GTAGTTTTCTTCATAGGCTT+AGG | - | chr5_1:63077530-63077549 | Msa0742930:intron | 35.0% |
| !! | GCATTAAGCATTGGAAGTAT+CGG | - | chr5_1:63077583-63077602 | Msa0742930:intron | 35.0% |
| !! | CGGAGATGGTTCTAATAATT+TGG | - | chr5_1:63077603-63077622 | Msa0742930:intron | 35.0% |
| AAACAAAGAGATGTCCCTTT+GGG | - | chr5_1:63077704-63077723 | Msa0742930:intron | 35.0% | |
| ATGATCAATTACCTTAGGAG+GGG | + | chr5_1:63077971-63077990 | None:intergenic | 35.0% | |
| TCCTTGCTTATAGTTAAAGC+TGG | - | chr5_1:63078012-63078031 | Msa0742930:intron | 35.0% | |
| ! | ACCAGCTTTAACTATAAGCA+AGG | + | chr5_1:63078016-63078035 | None:intergenic | 35.0% |
| ! | TTTTCAAATTGCCACCATAG+CGG | - | chr5_1:63078137-63078156 | Msa0742930:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | + | chr5_1:63078194-63078213 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+CGG | - | chr5_1:63078197-63078216 | Msa0742930:intron | 35.0% | |
| GTTATCTTAAGTGGAATGGA+CGG | + | chr5_1:63078295-63078314 | None:intergenic | 35.0% | |
| GATCACGGAAAATTTCAGTT+TGG | - | chr5_1:63078354-63078373 | Msa0742930:intron | 35.0% | |
| ATATTGTGAAACAGCCACTA+TGG | + | chr5_1:63078412-63078431 | None:intergenic | 35.0% | |
| !! | GTGGCTGTTTCACAATATTT+TGG | - | chr5_1:63078414-63078433 | Msa0742930:intron | 35.0% |
| GAAGTACAAATCTCATTGCA+AGG | - | chr5_1:63078565-63078584 | Msa0742930:intron | 35.0% | |
| TAATGCAACTACAGTTGTGA+TGG | - | chr5_1:63078638-63078657 | Msa0742930:intron | 35.0% | |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr5_1:63078813-63078832 | None:intergenic | 35.0% | |
| !! | CTAAGAAGAAGCGTTTACTT+TGG | - | chr5_1:63078926-63078945 | Msa0742930:CDS | 35.0% |
| CTCTTGTTCATTGGAAATTG+AGG | + | chr5_1:63077190-63077209 | None:intergenic | 35.0% | |
| CTCAATTTCCAATGAACAAG+AGG | - | chr5_1:63077188-63077207 | Msa0742930:CDS | 35.0% | |
| ! | TTTCTTTGTTTGATGCAGGA+GGG | + | chr5_1:63077255-63077274 | None:intergenic | 35.0% |
| ! | CATGTTTCTTTGTTTGATGC+AGG | + | chr5_1:63077259-63077278 | None:intergenic | 35.0% |
| ! | AAGTTTGGTAATTGTCCGAA+AGG | - | chr5_1:63077322-63077341 | Msa0742930:intron | 35.0% |
| TAGGTACAATGTTCACCTTT+CGG | + | chr5_1:63077340-63077359 | None:intergenic | 35.0% | |
| TCAGAAAATCATCCACAAGA+TGG | - | chr5_1:63077456-63077475 | Msa0742930:intron | 35.0% | |
| CAGAAAATCATCCACAAGAT+GGG | - | chr5_1:63077457-63077476 | Msa0742930:intron | 35.0% | |
| AGAAAATCATCCACAAGATG+GGG | - | chr5_1:63077458-63077477 | Msa0742930:intron | 35.0% | |
| CCATTGTAGTATTTCTTGCA+TGG | + | chr5_1:63077484-63077503 | None:intergenic | 35.0% | |
| CCATGCAAGAAATACTACAA+TGG | - | chr5_1:63077481-63077500 | Msa0742930:intron | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr5_1:63077486-63077505 | Msa0742930:intron | 35.0% | |
| ! | GTAGTTTTCTTCATAGGCTT+AGG | - | chr5_1:63077530-63077549 | Msa0742930:intron | 35.0% |
| !! | GCATTAAGCATTGGAAGTAT+CGG | - | chr5_1:63077583-63077602 | Msa0742930:intron | 35.0% |
| !! | CGGAGATGGTTCTAATAATT+TGG | - | chr5_1:63077603-63077622 | Msa0742930:intron | 35.0% |
| AAACAAAGAGATGTCCCTTT+GGG | - | chr5_1:63077704-63077723 | Msa0742930:intron | 35.0% | |
| ATGATCAATTACCTTAGGAG+GGG | + | chr5_1:63077971-63077990 | None:intergenic | 35.0% | |
| TCCTTGCTTATAGTTAAAGC+TGG | - | chr5_1:63078012-63078031 | Msa0742930:intron | 35.0% | |
| ! | ACCAGCTTTAACTATAAGCA+AGG | + | chr5_1:63078016-63078035 | None:intergenic | 35.0% |
| ! | TTTTCAAATTGCCACCATAG+CGG | - | chr5_1:63078137-63078156 | Msa0742930:intron | 35.0% |
| ATAATAGCCATTGTAGCCTA+TGG | + | chr5_1:63078194-63078213 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+CGG | - | chr5_1:63078197-63078216 | Msa0742930:intron | 35.0% | |
| GTTATCTTAAGTGGAATGGA+CGG | + | chr5_1:63078295-63078314 | None:intergenic | 35.0% | |
| GATCACGGAAAATTTCAGTT+TGG | - | chr5_1:63078354-63078373 | Msa0742930:intron | 35.0% | |
| ATATTGTGAAACAGCCACTA+TGG | + | chr5_1:63078412-63078431 | None:intergenic | 35.0% | |
| !! | GTGGCTGTTTCACAATATTT+TGG | - | chr5_1:63078414-63078433 | Msa0742930:intron | 35.0% |
| GAAGTACAAATCTCATTGCA+AGG | - | chr5_1:63078565-63078584 | Msa0742930:intron | 35.0% | |
| TAATGCAACTACAGTTGTGA+TGG | - | chr5_1:63078638-63078657 | Msa0742930:intron | 35.0% | |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr5_1:63078813-63078832 | None:intergenic | 35.0% | |
| !! | CTAAGAAGAAGCGTTTACTT+TGG | - | chr5_1:63078926-63078945 | Msa0742930:CDS | 35.0% |
| TTGCTTCGAAGATATCGTTG+TGG | + | chr5_1:63077165-63077184 | None:intergenic | 40.0% | |
| ATTCTTGGCCTCTTGTTCAT+TGG | + | chr5_1:63077199-63077218 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGTTTGATGCAGG+AGG | + | chr5_1:63077256-63077275 | None:intergenic | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | - | chr5_1:63077346-63077365 | Msa0742930:intron | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | - | chr5_1:63077347-63077366 | Msa0742930:intron | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr5_1:63077499-63077518 | Msa0742930:intron | 40.0% | |
| ACTTCCAATGCTTAATGCAC+AGG | + | chr5_1:63077581-63077600 | None:intergenic | 40.0% | |
| CAAACAAAGAGATGTCCCTT+TGG | - | chr5_1:63077703-63077722 | Msa0742930:intron | 40.0% | |
| AACAAAGAGATGTCCCTTTG+GGG | - | chr5_1:63077705-63077724 | Msa0742930:intron | 40.0% | |
| ACATAAACTTTCCCCTCCTA+AGG | - | chr5_1:63077957-63077976 | Msa0742930:intron | 40.0% | |
| ATGGCAGCTAGCAAAAAATG+TGG | + | chr5_1:63078266-63078285 | None:intergenic | 40.0% | |
| CAGCGTTATCTTAAGTGGAA+TGG | + | chr5_1:63078299-63078318 | None:intergenic | 40.0% | |
| TAGAGCAGCGTTATCTTAAG+TGG | + | chr5_1:63078304-63078323 | None:intergenic | 40.0% | |
| CAATTCTATAGCGACCATAG+TGG | - | chr5_1:63078395-63078414 | Msa0742930:intron | 40.0% | |
| !!! | TAATGTTTTAGCCGCAATCG+TGG | - | chr5_1:63078679-63078698 | Msa0742930:CDS | 40.0% |
| AATGTTTCCAACCACGATTG+CGG | + | chr5_1:63078693-63078712 | None:intergenic | 40.0% | |
| GCAGAAACTGGTAAGACATT+TGG | + | chr5_1:63078847-63078866 | None:intergenic | 40.0% | |
| TTGCTTCGAAGATATCGTTG+TGG | + | chr5_1:63077165-63077184 | None:intergenic | 40.0% | |
| ATTCTTGGCCTCTTGTTCAT+TGG | + | chr5_1:63077199-63077218 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGTTTGATGCAGG+AGG | + | chr5_1:63077256-63077275 | None:intergenic | 40.0% |
| GAACATTGTACCTATGCTCA+CGG | - | chr5_1:63077346-63077365 | Msa0742930:intron | 40.0% | |
| AACATTGTACCTATGCTCAC+GGG | - | chr5_1:63077347-63077366 | Msa0742930:intron | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr5_1:63077499-63077518 | Msa0742930:intron | 40.0% | |
| ACTTCCAATGCTTAATGCAC+AGG | + | chr5_1:63077581-63077600 | None:intergenic | 40.0% | |
| CAAACAAAGAGATGTCCCTT+TGG | - | chr5_1:63077703-63077722 | Msa0742930:intron | 40.0% | |
| AACAAAGAGATGTCCCTTTG+GGG | - | chr5_1:63077705-63077724 | Msa0742930:intron | 40.0% | |
| ACATAAACTTTCCCCTCCTA+AGG | - | chr5_1:63077957-63077976 | Msa0742930:intron | 40.0% | |
| ATGGCAGCTAGCAAAAAATG+TGG | + | chr5_1:63078266-63078285 | None:intergenic | 40.0% | |
| CAGCGTTATCTTAAGTGGAA+TGG | + | chr5_1:63078299-63078318 | None:intergenic | 40.0% | |
| TAGAGCAGCGTTATCTTAAG+TGG | + | chr5_1:63078304-63078323 | None:intergenic | 40.0% | |
| CAATTCTATAGCGACCATAG+TGG | - | chr5_1:63078395-63078414 | Msa0742930:intron | 40.0% | |
| !!! | TAATGTTTTAGCCGCAATCG+TGG | - | chr5_1:63078679-63078698 | Msa0742930:CDS | 40.0% |
| AATGTTTCCAACCACGATTG+CGG | + | chr5_1:63078693-63078712 | None:intergenic | 40.0% | |
| GCAGAAACTGGTAAGACATT+TGG | + | chr5_1:63078847-63078866 | None:intergenic | 40.0% | |
| CTTCGAAGATATCGTTGTGG+CGG | + | chr5_1:63077162-63077181 | None:intergenic | 45.0% | |
| ! | AGGAGGGCATATGAATGCAT+TGG | + | chr5_1:63077239-63077258 | None:intergenic | 45.0% |
| ACATTGTACCTATGCTCACG+GGG | - | chr5_1:63077348-63077367 | Msa0742930:intron | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | - | chr5_1:63077589-63077608 | Msa0742930:intron | 45.0% |
| ! | TCTCTTTGTTTGCTGCCACA+TGG | + | chr5_1:63077695-63077714 | None:intergenic | 45.0% |
| CACTATGGTCATGGAGAAAC+AGG | - | chr5_1:63077736-63077755 | Msa0742930:intron | 45.0% | |
| !! | GCTGGTTCTGAATGAGCATT+TGG | - | chr5_1:63078030-63078049 | Msa0742930:intron | 45.0% |
| GCACAAAATCATCCATGCCT+TGG | + | chr5_1:63078165-63078184 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | + | chr5_1:63078191-63078210 | None:intergenic | 45.0% | |
| ATCCGGCATGTTTATGCCAT+AGG | - | chr5_1:63078214-63078233 | Msa0742930:intron | 45.0% | |
| ACAATGCAAGCATGGAGTTG+TGG | + | chr5_1:63078240-63078259 | None:intergenic | 45.0% | |
| TGTGGCATACAATGCAAGCA+TGG | + | chr5_1:63078248-63078267 | None:intergenic | 45.0% | |
| AGATAACGCTGCTCTATCTG+AGG | - | chr5_1:63078308-63078327 | Msa0742930:intron | 45.0% | |
| GCTATAGAATTGTTGCGCAG+CGG | + | chr5_1:63078387-63078406 | None:intergenic | 45.0% | |
| TGCAACTACAGTTGTGATGG+CGG | - | chr5_1:63078641-63078660 | Msa0742930:intron | 45.0% | |
| AGATTTACTGGGATGCTGGT+AGG | + | chr5_1:63078880-63078899 | None:intergenic | 45.0% | |
| ACCAGCATCCCAGTAAATCT+AGG | - | chr5_1:63078880-63078899 | Msa0742930:CDS | 45.0% | |
| ACCTAGATTTACTGGGATGC+TGG | + | chr5_1:63078884-63078903 | None:intergenic | 45.0% | |
| CATCCCAGTAAATCTAGGTG+CGG | - | chr5_1:63078885-63078904 | Msa0742930:CDS | 45.0% | |
| TTGCCGCACCTAGATTTACT+GGG | + | chr5_1:63078891-63078910 | None:intergenic | 45.0% | |
| TTTGCCGCACCTAGATTTAC+TGG | + | chr5_1:63078892-63078911 | None:intergenic | 45.0% | |
| AGTAAATCTAGGTGCGGCAA+AGG | - | chr5_1:63078891-63078910 | Msa0742930:CDS | 45.0% | |
| CTTCGAAGATATCGTTGTGG+CGG | + | chr5_1:63077162-63077181 | None:intergenic | 45.0% | |
| ! | AGGAGGGCATATGAATGCAT+TGG | + | chr5_1:63077239-63077258 | None:intergenic | 45.0% |
| ACATTGTACCTATGCTCACG+GGG | - | chr5_1:63077348-63077367 | Msa0742930:intron | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | - | chr5_1:63077589-63077608 | Msa0742930:intron | 45.0% |
| ! | TCTCTTTGTTTGCTGCCACA+TGG | + | chr5_1:63077695-63077714 | None:intergenic | 45.0% |
| CACTATGGTCATGGAGAAAC+AGG | - | chr5_1:63077736-63077755 | Msa0742930:intron | 45.0% | |
| !! | GCTGGTTCTGAATGAGCATT+TGG | - | chr5_1:63078030-63078049 | Msa0742930:intron | 45.0% |
| GCACAAAATCATCCATGCCT+TGG | + | chr5_1:63078165-63078184 | None:intergenic | 45.0% | |
| ATAGCCATTGTAGCCTATGG+CGG | + | chr5_1:63078191-63078210 | None:intergenic | 45.0% | |
| ATCCGGCATGTTTATGCCAT+AGG | - | chr5_1:63078214-63078233 | Msa0742930:intron | 45.0% | |
| ACAATGCAAGCATGGAGTTG+TGG | + | chr5_1:63078240-63078259 | None:intergenic | 45.0% | |
| TGTGGCATACAATGCAAGCA+TGG | + | chr5_1:63078248-63078267 | None:intergenic | 45.0% | |
| AGATAACGCTGCTCTATCTG+AGG | - | chr5_1:63078308-63078327 | Msa0742930:intron | 45.0% | |
| GCTATAGAATTGTTGCGCAG+CGG | + | chr5_1:63078387-63078406 | None:intergenic | 45.0% | |
| TGCAACTACAGTTGTGATGG+CGG | - | chr5_1:63078641-63078660 | Msa0742930:intron | 45.0% | |
| AGATTTACTGGGATGCTGGT+AGG | + | chr5_1:63078880-63078899 | None:intergenic | 45.0% | |
| ACCAGCATCCCAGTAAATCT+AGG | - | chr5_1:63078880-63078899 | Msa0742930:CDS | 45.0% | |
| ACCTAGATTTACTGGGATGC+TGG | + | chr5_1:63078884-63078903 | None:intergenic | 45.0% | |
| CATCCCAGTAAATCTAGGTG+CGG | - | chr5_1:63078885-63078904 | Msa0742930:CDS | 45.0% | |
| TTGCCGCACCTAGATTTACT+GGG | + | chr5_1:63078891-63078910 | None:intergenic | 45.0% | |
| TTTGCCGCACCTAGATTTAC+TGG | + | chr5_1:63078892-63078911 | None:intergenic | 45.0% | |
| AGTAAATCTAGGTGCGGCAA+AGG | - | chr5_1:63078891-63078910 | Msa0742930:CDS | 45.0% | |
| AAGATATCGTTGTGGCGGTC+TGG | + | chr5_1:63077157-63077176 | None:intergenic | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | + | chr5_1:63077397-63077416 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr5_1:63077426-63077445 | Msa0742930:intron | 50.0% | |
| GAGGCCTGTGCATTAAGCAT+TGG | - | chr5_1:63077574-63077593 | Msa0742930:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr5_1:63077636-63077655 | Msa0742930:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr5_1:63077637-63077656 | Msa0742930:intron | 50.0% | |
| AGCTGTGTTCCACTTCCATG+TGG | - | chr5_1:63077677-63077696 | Msa0742930:intron | 50.0% | |
| ! | TGTTTGCTGCCACATGGAAG+TGG | + | chr5_1:63077689-63077708 | None:intergenic | 50.0% |
| ! | AAAGAGATGTCCCTTTGGGG+AGG | - | chr5_1:63077708-63077727 | Msa0742930:intron | 50.0% |
| TAGTGACAGTCCTCCCCAAA+GGG | + | chr5_1:63077721-63077740 | None:intergenic | 50.0% | |
| ATAGTGACAGTCCTCCCCAA+AGG | + | chr5_1:63077722-63077741 | None:intergenic | 50.0% | |
| TTTGGGGAGGACTGTCACTA+TGG | - | chr5_1:63077721-63077740 | Msa0742930:intron | 50.0% | |
| GAGGACTGTCACTATGGTCA+TGG | - | chr5_1:63077727-63077746 | Msa0742930:intron | 50.0% | |
| GGCCTATGGCATAAACATGC+CGG | + | chr5_1:63078219-63078238 | None:intergenic | 50.0% | |
| AAGCATGGAGTTGTGGCCTA+TGG | + | chr5_1:63078233-63078252 | None:intergenic | 50.0% | |
| TCTTAAGTGGAATGGACGGC+AGG | + | chr5_1:63078291-63078310 | None:intergenic | 50.0% | |
| !! | GTTTTAGCCGCAATCGTGGT+TGG | - | chr5_1:63078683-63078702 | Msa0742930:CDS | 50.0% |
| GGTGCATCATTGGCAGAAAC+TGG | + | chr5_1:63078859-63078878 | None:intergenic | 50.0% | |
| GATGCTGGTAGGTGCATCAT+TGG | + | chr5_1:63078869-63078888 | None:intergenic | 50.0% | |
| GGCAACTTGGGAACAACAAG+AGG | + | chr5_1:63079006-63079025 | None:intergenic | 50.0% | |
| TCCTCTGCACTTGGCAACTT+GGG | + | chr5_1:63079018-63079037 | None:intergenic | 50.0% | |
| AAGATATCGTTGTGGCGGTC+TGG | + | chr5_1:63077157-63077176 | None:intergenic | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | + | chr5_1:63077397-63077416 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr5_1:63077426-63077445 | Msa0742930:intron | 50.0% | |
| GAGGCCTGTGCATTAAGCAT+TGG | - | chr5_1:63077574-63077593 | Msa0742930:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr5_1:63077636-63077655 | Msa0742930:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr5_1:63077637-63077656 | Msa0742930:intron | 50.0% | |
| AGCTGTGTTCCACTTCCATG+TGG | - | chr5_1:63077677-63077696 | Msa0742930:intron | 50.0% | |
| ! | TGTTTGCTGCCACATGGAAG+TGG | + | chr5_1:63077689-63077708 | None:intergenic | 50.0% |
| ! | AAAGAGATGTCCCTTTGGGG+AGG | - | chr5_1:63077708-63077727 | Msa0742930:intron | 50.0% |
| TAGTGACAGTCCTCCCCAAA+GGG | + | chr5_1:63077721-63077740 | None:intergenic | 50.0% | |
| ATAGTGACAGTCCTCCCCAA+AGG | + | chr5_1:63077722-63077741 | None:intergenic | 50.0% | |
| TTTGGGGAGGACTGTCACTA+TGG | - | chr5_1:63077721-63077740 | Msa0742930:intron | 50.0% | |
| GAGGACTGTCACTATGGTCA+TGG | - | chr5_1:63077727-63077746 | Msa0742930:intron | 50.0% | |
| GGCCTATGGCATAAACATGC+CGG | + | chr5_1:63078219-63078238 | None:intergenic | 50.0% | |
| AAGCATGGAGTTGTGGCCTA+TGG | + | chr5_1:63078233-63078252 | None:intergenic | 50.0% | |
| TCTTAAGTGGAATGGACGGC+AGG | + | chr5_1:63078291-63078310 | None:intergenic | 50.0% | |
| !! | GTTTTAGCCGCAATCGTGGT+TGG | - | chr5_1:63078683-63078702 | Msa0742930:CDS | 50.0% |
| GGTGCATCATTGGCAGAAAC+TGG | + | chr5_1:63078859-63078878 | None:intergenic | 50.0% | |
| GATGCTGGTAGGTGCATCAT+TGG | + | chr5_1:63078869-63078888 | None:intergenic | 50.0% | |
| GGCAACTTGGGAACAACAAG+AGG | + | chr5_1:63079006-63079025 | None:intergenic | 50.0% | |
| TCCTCTGCACTTGGCAACTT+GGG | + | chr5_1:63079018-63079037 | None:intergenic | 50.0% | |
| TGTACCTATGCTCACGGGGT+TGG | - | chr5_1:63077352-63077371 | Msa0742930:intron | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr5_1:63077362-63077381 | Msa0742930:intron | 55.0% |
| GCTAGCTCCTTCCAATTCGG+CGG | + | chr5_1:63077394-63077413 | None:intergenic | 55.0% | |
| CCGAATTGGAAGGAGCTAGC+TGG | - | chr5_1:63077394-63077413 | Msa0742930:intron | 55.0% | |
| GCATCCATTCCTCGTTGCGA+GGG | + | chr5_1:63077420-63077439 | None:intergenic | 55.0% | |
| TGCATCCATTCCTCGTTGCG+AGG | + | chr5_1:63077421-63077440 | None:intergenic | 55.0% | |
| TCTTGCATGGCCCCATCTTG+TGG | + | chr5_1:63077471-63077490 | None:intergenic | 55.0% | |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr5_1:63077635-63077654 | Msa0742930:intron | 55.0% | |
| TTCCAGTAAGTGCCCCTTGC+TGG | + | chr5_1:63077652-63077671 | None:intergenic | 55.0% | |
| ! | GATTTTGTGCCAGCCGCCAT+AGG | - | chr5_1:63078175-63078194 | Msa0742930:intron | 55.0% |
| GTGGAATGGACGGCAGGTTA+TGG | + | chr5_1:63078285-63078304 | None:intergenic | 55.0% | |
| TCTAGGTGCGGCAAAGGAAG+AGG | - | chr5_1:63078897-63078916 | Msa0742930:CDS | 55.0% | |
| TCCCAAGTTGCCAAGTGCAG+AGG | - | chr5_1:63079014-63079033 | Msa0742930:CDS | 55.0% | |
| CTCCTCTGCACTTGGCAACT+TGG | + | chr5_1:63079019-63079038 | None:intergenic | 55.0% | |
| TGTACCTATGCTCACGGGGT+TGG | - | chr5_1:63077352-63077371 | Msa0742930:intron | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr5_1:63077362-63077381 | Msa0742930:intron | 55.0% |
| GCTAGCTCCTTCCAATTCGG+CGG | + | chr5_1:63077394-63077413 | None:intergenic | 55.0% | |
| CCGAATTGGAAGGAGCTAGC+TGG | - | chr5_1:63077394-63077413 | Msa0742930:intron | 55.0% | |
| GCATCCATTCCTCGTTGCGA+GGG | + | chr5_1:63077420-63077439 | None:intergenic | 55.0% | |
| TGCATCCATTCCTCGTTGCG+AGG | + | chr5_1:63077421-63077440 | None:intergenic | 55.0% | |
| TCTTGCATGGCCCCATCTTG+TGG | + | chr5_1:63077471-63077490 | None:intergenic | 55.0% | |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr5_1:63077635-63077654 | Msa0742930:intron | 55.0% | |
| TTCCAGTAAGTGCCCCTTGC+TGG | + | chr5_1:63077652-63077671 | None:intergenic | 55.0% | |
| ! | GATTTTGTGCCAGCCGCCAT+AGG | - | chr5_1:63078175-63078194 | Msa0742930:intron | 55.0% |
| GTGGAATGGACGGCAGGTTA+TGG | + | chr5_1:63078285-63078304 | None:intergenic | 55.0% | |
| TCTAGGTGCGGCAAAGGAAG+AGG | - | chr5_1:63078897-63078916 | Msa0742930:CDS | 55.0% | |
| TCCCAAGTTGCCAAGTGCAG+AGG | - | chr5_1:63079014-63079033 | Msa0742930:CDS | 55.0% | |
| CTCCTCTGCACTTGGCAACT+TGG | + | chr5_1:63079019-63079038 | None:intergenic | 55.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr5_1:63077359-63077378 | None:intergenic | 60.0% | |
| TAAGGCAGCCACCGCCGAAT+TGG | - | chr5_1:63077380-63077399 | Msa0742930:intron | 60.0% | |
| AGCTCCTTCCAATTCGGCGG+TGG | + | chr5_1:63077391-63077410 | None:intergenic | 60.0% | |
| !! | AGCCAGCAAGGGGCACTTAC+TGG | - | chr5_1:63077647-63077666 | Msa0742930:intron | 60.0% |
| TTGCCACCATAGCGGCACCA+AGG | - | chr5_1:63078145-63078164 | Msa0742930:intron | 60.0% | |
| !! | ATGCCTTGGTGCCGCTATGG+TGG | + | chr5_1:63078151-63078170 | None:intergenic | 60.0% |
| ACCATAGCGGCACCAAGGCA+TGG | - | chr5_1:63078150-63078169 | Msa0742930:intron | 60.0% | |
| !! | TCCATGCCTTGGTGCCGCTA+TGG | + | chr5_1:63078154-63078173 | None:intergenic | 60.0% |
| CCATTGTAGCCTATGGCGGC+TGG | + | chr5_1:63078187-63078206 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | - | chr5_1:63078184-63078203 | Msa0742930:intron | 60.0% | |
| ! | TGCGGCAAAGGAAGAGGTGC+AGG | - | chr5_1:63078903-63078922 | Msa0742930:CDS | 60.0% |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr5_1:63077359-63077378 | None:intergenic | 60.0% | |
| TAAGGCAGCCACCGCCGAAT+TGG | - | chr5_1:63077380-63077399 | Msa0742930:intron | 60.0% | |
| AGCTCCTTCCAATTCGGCGG+TGG | + | chr5_1:63077391-63077410 | None:intergenic | 60.0% | |
| !! | AGCCAGCAAGGGGCACTTAC+TGG | - | chr5_1:63077647-63077666 | Msa0742930:intron | 60.0% |
| TTGCCACCATAGCGGCACCA+AGG | - | chr5_1:63078145-63078164 | Msa0742930:intron | 60.0% | |
| !! | ATGCCTTGGTGCCGCTATGG+TGG | + | chr5_1:63078151-63078170 | None:intergenic | 60.0% |
| ACCATAGCGGCACCAAGGCA+TGG | - | chr5_1:63078150-63078169 | Msa0742930:intron | 60.0% | |
| !! | TCCATGCCTTGGTGCCGCTA+TGG | + | chr5_1:63078154-63078173 | None:intergenic | 60.0% |
| CCATTGTAGCCTATGGCGGC+TGG | + | chr5_1:63078187-63078206 | None:intergenic | 60.0% | |
| CCAGCCGCCATAGGCTACAA+TGG | - | chr5_1:63078184-63078203 | Msa0742930:intron | 60.0% | |
| ! | TGCGGCAAAGGAAGAGGTGC+AGG | - | chr5_1:63078903-63078922 | Msa0742930:CDS | 60.0% |
| GCAGCCACCGCCGAATTGGA+AGG | - | chr5_1:63077384-63077403 | Msa0742930:intron | 65.0% | |
| CTGGCCCTCGCAACGAGGAA+TGG | - | chr5_1:63077413-63077432 | Msa0742930:intron | 65.0% | |
| GCAGCCACCGCCGAATTGGA+AGG | - | chr5_1:63077384-63077403 | Msa0742930:intron | 65.0% | |
| CTGGCCCTCGCAACGAGGAA+TGG | - | chr5_1:63077413-63077432 | Msa0742930:intron | 65.0% | |
| GCTAGCTGGCCCTCGCAACG+AGG | - | chr5_1:63077408-63077427 | Msa0742930:intron | 70.0% | |
| GCTAGCTGGCCCTCGCAACG+AGG | - | chr5_1:63077408-63077427 | Msa0742930:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 63077145 | 63079044 | 63077145 | ID=Msa0742930;Name=Msa0742930 |
| chr5_1 | mRNA | 63077145 | 63079044 | 63077145 | ID=Msa0742930-mRNA-1;Parent=Msa0742930;Name=Msa0742930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|229 |
| chr5_1 | exon | 63078669 | 63079044 | 63078669 | ID=Msa0742930-mRNA-1:exon:18548;Parent=Msa0742930-mRNA-1 |
| chr5_1 | exon | 63078432 | 63078560 | 63078432 | ID=Msa0742930-mRNA-1:exon:18547;Parent=Msa0742930-mRNA-1 |
| chr5_1 | exon | 63077145 | 63077329 | 63077145 | ID=Msa0742930-mRNA-1:exon:18546;Parent=Msa0742930-mRNA-1 |
| chr5_1 | CDS | 63078669 | 63079044 | 63078669 | ID=Msa0742930-mRNA-1:cds;Parent=Msa0742930-mRNA-1 |
| chr5_1 | CDS | 63078432 | 63078560 | 63078432 | ID=Msa0742930-mRNA-1:cds;Parent=Msa0742930-mRNA-1 |
| chr5_1 | CDS | 63077145 | 63077329 | 63077145 | ID=Msa0742930-mRNA-1:cds;Parent=Msa0742930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
