AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0743590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743590 MtrunA17_Chr5g0445311 94.343 548 28 1 1 548 1 545 0.0 1067
Msa0743590 MtrunA17_Chr3g0101131 66.955 578 141 8 15 548 24 595 0.0 743
Msa0743590 MtrunA17_Chr3g0079691 43.524 471 170 12 41 433 109 561 1.90e-95 305
Msa0743590 MtrunA17_Chr3g0079691 46.914 81 40 2 203 280 495 575 2.08e-13 73.2
Msa0743590 MtrunA17_Chr5g0432161 43.836 438 157 13 45 431 86 485 1.78e-88 284
Msa0743590 MtrunA17_Chr5g0432161 50.704 71 21 2 203 259 421 491 1.34e-12 70.5
Msa0743590 MtrunA17_Chr3g0106491 45.012 411 170 11 39 431 57 429 1.43e-87 279
Msa0743590 MtrunA17_Chr7g0218081 40.523 459 198 14 29 462 95 503 1.95e-86 276
Msa0743590 MtrunA17_Chr5g0418191 51.568 287 125 6 202 481 150 429 2.11e-81 261
Msa0743590 MtrunA17_Chr7g0243891 40.678 413 178 10 51 432 63 439 1.81e-80 262
Msa0743590 MtrunA17_Chr7g0249311 48.621 290 94 3 196 433 172 458 5.41e-78 258
Msa0743590 MtrunA17_Chr7g0249311 50.685 73 33 2 203 272 392 464 5.89e-13 71.6
Msa0743590 MtrunA17_Chr4g0004911 40.609 394 177 14 47 429 51 398 2.31e-74 244
Msa0743590 MtrunA17_Chr4g0042831 49.412 255 92 5 185 436 127 347 1.27e-71 234
Msa0743590 MtrunA17_Chr4g0042831 36.232 138 77 3 367 503 145 272 1.21e-13 72.8
Msa0743590 MtrunA17_Chr7g0263531 46.125 271 137 4 164 426 151 420 3.89e-71 234
Msa0743590 MtrunA17_Chr5g0447701 42.742 248 130 5 202 445 91 330 3.89e-51 180
Msa0743590 MtrunA17_Chr5g0447701 50.000 64 31 1 365 428 90 152 1.34e-12 69.7
Msa0743590 MtrunA17_Chr4g0074001 40.496 242 125 6 202 429 185 421 4.57e-48 174
Msa0743590 MtrunA17_Chr4g0074001 53.731 67 30 1 202 267 358 424 5.22e-15 77.8
Msa0743590 MtrunA17_Chr7g0249301 78.049 82 18 0 348 429 273 354 3.70e-41 152
Msa0743590 MtrunA17_Chr7g0249301 43.624 149 72 4 196 342 55 193 2.24e-26 110
Msa0743590 MtrunA17_Chr7g0249301 59.016 61 24 1 366 426 61 120 8.22e-15 76.3
Msa0743590 MtrunA17_Chr7g0249301 55.000 60 26 1 203 261 292 351 9.55e-13 70.1
Msa0743590 MtrunA17_Chr5g0447711 32.192 292 143 6 163 434 41 297 1.27e-36 138
Msa0743590 MtrunA17_Chr1g0188941 69.737 76 23 0 351 426 35 110 1.50e-33 123
Msa0743590 MtrunA17_Chr1g0188941 50.000 62 30 1 203 263 51 112 1.31e-15 73.2
Msa0743590 MtrunA17_Chr8g0335811 61.250 80 31 0 344 423 131 210 5.57e-30 117
Msa0743590 MtrunA17_Chr8g0335811 51.389 72 34 1 188 258 139 210 5.97e-15 74.3
Msa0743590 MtrunA17_Chr3g0129361 63.514 74 27 0 350 423 127 200 1.25e-29 116
Msa0743590 MtrunA17_Chr3g0129361 47.222 72 37 1 188 258 129 200 1.51e-13 70.1
Msa0743590 MtrunA17_Chr7g0270191 59.770 87 35 0 351 437 129 215 1.31e-28 115
Msa0743590 MtrunA17_Chr7g0270191 41.781 146 78 5 204 345 146 288 4.20e-20 90.9
Msa0743590 MtrunA17_Chr5g0418781 57.292 96 37 2 348 442 105 197 4.58e-28 113
Msa0743590 MtrunA17_Chr5g0418781 62.500 56 20 1 204 258 125 180 1.69e-14 73.9
Msa0743590 MtrunA17_Chr8g0383351 61.333 75 28 1 350 423 142 216 5.28e-28 112
Msa0743590 MtrunA17_Chr8g0383351 54.386 57 25 1 203 258 160 216 1.45e-13 70.5
Msa0743590 MtrunA17_Chr2g0294231 57.609 92 39 0 351 442 187 278 6.16e-28 115
Msa0743590 MtrunA17_Chr2g0294231 52.000 75 35 1 188 261 188 262 2.75e-15 77.8
Msa0743590 MtrunA17_Chr1g0194481 58.140 86 36 0 347 432 138 223 1.12e-27 113
Msa0743590 MtrunA17_Chr1g0194481 48.810 84 42 1 188 270 143 226 3.16e-16 80.1
Msa0743590 MtrunA17_Chr4g0051881 63.158 76 28 0 353 428 164 239 1.84e-27 113
Msa0743590 MtrunA17_Chr4g0051881 59.322 59 23 1 204 261 179 237 5.79e-15 76.3
Msa0743590 MtrunA17_Chr5g0443131 61.333 75 29 0 353 427 143 217 9.12e-27 110
Msa0743590 MtrunA17_Chr5g0443131 57.627 59 24 1 204 261 158 216 2.91e-13 70.9
Msa0743590 MtrunA17_Chr1g0150801 59.211 76 30 1 348 423 84 158 1.28e-26 105
Msa0743590 MtrunA17_Chr1g0150801 50.000 58 28 1 203 259 102 159 2.26e-11 62.4
Msa0743590 MtrunA17_Chr7g0270831 47.222 108 48 3 335 441 188 287 2.03e-25 108
Msa0743590 MtrunA17_Chr8g0386241 53.571 84 39 0 348 431 84 167 2.50e-25 102
Msa0743590 MtrunA17_Chr8g0386241 56.897 58 24 1 203 259 103 160 7.07e-16 75.9
Msa0743590 MtrunA17_Chr7g0224801 63.235 68 25 0 358 425 84 151 4.26e-25 102
Msa0743590 MtrunA17_Chr7g0224801 55.172 58 25 1 203 259 93 150 2.03e-15 74.3
Msa0743590 MtrunA17_Chr8g0383251 47.191 89 47 0 354 442 95 183 1.26e-24 101
Msa0743590 MtrunA17_Chr2g0288871 55.128 78 34 1 350 426 288 365 7.77e-24 105
Msa0743590 MtrunA17_Chr2g0288871 34.091 132 64 4 133 261 254 365 3.49e-13 72.0
Msa0743590 MtrunA17_Chr4g0075201 55.000 80 35 1 350 428 250 329 1.10e-23 104
Msa0743590 MtrunA17_Chr4g0075201 50.820 61 28 2 203 261 267 327 7.53e-12 67.8
Msa0743590 MtrunA17_Chr2g0322391 55.000 80 35 1 350 428 332 411 1.34e-23 104
Msa0743590 MtrunA17_Chr3g0099641 52.564 78 36 1 350 426 234 311 1.58e-23 103
Msa0743590 MtrunA17_Chr3g0129321 53.333 75 35 0 353 427 104 178 5.77e-23 97.1
Msa0743590 MtrunA17_Chr3g0129321 50.000 60 29 1 203 261 118 177 4.72e-12 65.5
Msa0743590 MtrunA17_Chr4g0025061 48.889 90 45 1 340 428 333 422 9.29e-23 102
Msa0743590 MtrunA17_Chr4g0051181 55.000 80 35 1 349 427 225 304 9.46e-23 101
Msa0743590 MtrunA17_Chr4g0051181 52.459 61 27 2 203 261 243 303 6.55e-12 67.8
Msa0743590 MtrunA17_Chr4g0060271 43.333 120 66 2 309 426 196 315 9.59e-23 102
Msa0743590 MtrunA17_Chr4g0060271 50.820 61 28 2 203 261 255 315 3.38e-11 65.9
Msa0743590 MtrunA17_Chr4g0068541 40.580 138 76 3 351 487 192 324 1.04e-22 100
Msa0743590 MtrunA17_Chr4g0068541 61.667 60 22 1 203 261 208 267 3.15e-15 77.8
Msa0743590 MtrunA17_Chr5g0401821 48.958 96 37 2 331 425 174 258 2.06e-22 97.1
Msa0743590 MtrunA17_Chr7g0248721 57.692 78 32 1 346 423 120 196 2.96e-22 95.5
Msa0743590 MtrunA17_Chr7g0248721 56.897 58 23 2 203 259 141 197 7.03e-14 71.2
Msa0743590 MtrunA17_Chr4g0053281 45.545 101 43 2 332 431 242 331 4.16e-22 97.8
Msa0743590 MtrunA17_Chr1g0189391 38.686 137 80 2 291 423 18 154 5.56e-22 97.4
Msa0743590 MtrunA17_Chr1g0147881 52.381 84 36 2 346 428 244 324 1.88e-21 95.9
Msa0743590 MtrunA17_Chr6g0485431 41.228 114 66 1 314 426 101 214 1.96e-21 96.3
Msa0743590 MtrunA17_Chr7g0216891 47.253 91 47 1 342 431 194 284 4.45e-21 97.1
Msa0743590 MtrunA17_Chr7g0216891 52.542 59 26 2 203 259 219 277 3.26e-11 65.9
Msa0743590 MtrunA17_Chr5g0432071 44.898 98 44 2 174 261 65 162 6.98e-21 91.3
Msa0743590 MtrunA17_Chr5g0432071 51.613 62 29 1 367 428 104 164 1.45e-14 72.8
Msa0743590 MtrunA17_Chr2g0302391 50.633 79 38 1 351 428 195 273 7.40e-21 95.1
Msa0743590 MtrunA17_Chr3g0136961 61.017 59 22 1 366 423 137 195 1.82e-20 92.0
Msa0743590 MtrunA17_Chr4g0025051 53.333 75 34 1 354 427 322 396 2.16e-20 94.7
Msa0743590 MtrunA17_Chr7g0238921 63.158 57 21 0 367 423 124 180 2.52e-20 92.0
Msa0743590 MtrunA17_Chr7g0238921 57.895 57 23 1 203 258 124 180 3.58e-13 70.9
Msa0743590 MtrunA17_Chr2g0333851 57.812 64 26 1 365 427 167 230 1.00e-19 90.1
Msa0743590 MtrunA17_Chr2g0333851 48.333 60 29 2 204 261 170 229 2.49e-11 65.1
Msa0743590 MtrunA17_Chr1g0150281 57.895 57 23 1 368 423 141 197 3.13e-19 88.2
Msa0743590 MtrunA17_Chr4g0071521 52.703 74 34 1 351 423 229 302 4.81e-19 88.2
Msa0743590 MtrunA17_Chr4g0001361 57.143 63 26 1 365 426 160 222 1.59e-18 86.7
Msa0743590 MtrunA17_Chr4g0001361 47.143 70 34 3 204 271 163 231 5.44e-12 67.0
Msa0743590 MtrunA17_Chr1g0184691 59.016 61 24 1 364 423 290 350 2.12e-18 87.0
Msa0743590 MtrunA17_Chr1g0150271 49.206 63 31 1 365 426 99 161 9.20e-18 83.2
Msa0743590 MtrunA17_Chr8g0379461 48.485 66 33 1 368 432 77 142 3.26e-17 81.3
Msa0743590 MtrunA17_Chr7g0228941 52.459 61 28 1 364 423 49 109 5.91e-17 77.4
Msa0743590 MtrunA17_Chr3g0139021 48.000 75 38 1 351 424 298 372 1.41e-16 82.0
Msa0743590 MtrunA17_Chr7g0270051 50.000 70 34 1 368 436 54 123 1.91e-16 79.7
Msa0743590 MtrunA17_Chr7g0270051 51.667 60 27 2 204 261 54 113 4.65e-12 66.6
Msa0743590 MtrunA17_Chr2g0289181 47.297 74 38 1 356 428 3 76 2.53e-16 78.6
Msa0743590 MtrunA17_Chr2g0289181 44.286 70 37 2 204 271 15 84 4.48e-11 63.2
Msa0743590 MtrunA17_Chr2g0284321 45.679 81 39 2 354 429 18 98 3.07e-16 77.8
Msa0743590 MtrunA17_Chr2g0284321 36.449 107 59 4 204 307 36 136 3.21e-13 68.9
Msa0743590 MtrunA17_Chr2g0319961 50.000 64 31 1 368 430 81 144 3.49e-16 79.0
Msa0743590 MtrunA17_Chr8g0387501 49.254 67 33 1 366 431 128 194 5.46e-16 78.6
Msa0743590 MtrunA17_Chr8g0387501 45.714 70 35 3 204 271 130 198 2.35e-11 64.7
Msa0743590 MtrunA17_Chr1g0188961 64.000 50 18 0 387 436 3 52 1.11e-15 71.6
Msa0743590 MtrunA17_Chr4g0024391 42.500 80 45 1 350 428 212 291 1.79e-15 79.0
Msa0743590 MtrunA17_Chr8g0348311 50.769 65 31 1 368 431 156 220 3.44e-15 77.0
Msa0743590 MtrunA17_Chr2g0293481 39.583 96 46 3 368 454 268 360 5.43e-15 77.4
Msa0743590 MtrunA17_Chr6g0468181 51.351 74 35 1 213 285 12 85 9.21e-15 70.9
Msa0743590 MtrunA17_Chr7g0248691 39.048 105 47 3 328 431 131 219 1.12e-14 75.5
Msa0743590 MtrunA17_Chr1g0202461 46.479 71 34 2 368 437 262 329 9.43e-14 73.2
Msa0743590 MtrunA17_Chr4g0009881 50.847 59 28 1 204 262 18 75 1.74e-13 67.0
Msa0743590 MtrunA17_Chr3g0126391 50.847 59 26 1 366 421 132 190 7.94e-13 69.7
Msa0743590 MtrunA17_Chr3g0126391 48.529 68 29 3 193 256 125 190 2.24e-11 65.5
Msa0743590 MtrunA17_Chr5g0419241 54.348 46 21 0 350 395 60 105 1.54e-12 64.3
Msa0743590 MtrunA17_Chr8g0387981 50.000 58 26 1 367 421 132 189 6.22e-12 67.4
Msa0743590 MtrunA17_Chr8g0387981 52.632 57 23 2 204 256 133 189 8.17e-11 63.9
Msa0743590 MtrunA17_Chr8g0347251 47.143 70 31 3 191 256 126 193 1.37e-11 66.2
Msa0743590 MtrunA17_Chr7g0275531 47.458 59 28 1 366 421 117 175 1.54e-11 65.9
Msa0743590 MtrunA17_Chr7g0275531 43.038 79 39 3 194 266 109 187 4.33e-11 64.3
Msa0743590 MtrunA17_Chr1g0188971 62.162 37 14 0 351 387 46 82 8.03e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743590 AT4G26640.2 54.745 548 196 15 27 548 36 557 2.89e-178 514
Msa0743590 AT4G26640.7 54.328 543 196 15 32 548 1 517 9.59e-175 504
Msa0743590 AT4G26640.1 52.767 506 187 15 69 548 6 485 3.00e-154 450
Msa0743590 AT4G26640.5 60.377 371 100 12 202 548 34 381 1.33e-140 412
Msa0743590 AT4G26640.6 60.377 371 100 12 202 548 34 381 1.33e-140 412
Msa0743590 AT4G26640.4 60.377 371 100 12 202 548 34 381 1.33e-140 412
Msa0743590 AT4G26640.3 60.377 371 100 12 202 548 34 381 1.33e-140 412
Msa0743590 AT5G56270.1 44.072 447 187 11 41 429 108 549 3.90e-91 294
Msa0743590 AT2G03340.1 41.627 418 191 13 28 435 109 483 6.71e-85 273
Msa0743590 AT2G38470.1 50.916 273 94 6 189 433 168 428 2.23e-78 256
Msa0743590 AT1G13960.1 40.227 440 178 16 15 426 86 468 4.62e-78 255
Msa0743590 AT4G26440.1 40.046 437 165 11 39 443 77 448 1.81e-75 249
Msa0743590 AT4G26440.1 38.136 118 61 3 367 473 178 294 1.69e-13 73.6
Msa0743590 AT4G26440.1 48.718 78 37 1 203 277 372 449 4.98e-12 68.9
Msa0743590 AT1G13960.2 53.942 241 95 5 202 426 75 315 2.30e-75 243
Msa0743590 AT5G07100.1 39.461 408 128 11 23 429 7 296 8.16e-72 232
Msa0743590 AT5G07100.1 39.167 120 57 3 335 441 77 193 1.67e-17 84.0
Msa0743590 AT3G01080.2 54.148 229 72 5 202 426 204 403 9.21e-70 231
Msa0743590 AT5G07100.2 51.082 231 64 4 200 429 21 203 1.18e-69 223
Msa0743590 AT5G07100.2 46.512 86 44 1 358 441 15 100 6.45e-16 77.4
Msa0743590 AT5G07100.2 46.250 80 42 1 185 263 123 202 1.57e-12 67.4
Msa0743590 AT5G07100.4 51.082 231 64 4 200 429 21 203 1.18e-69 223
Msa0743590 AT5G07100.4 46.512 86 44 1 358 441 15 100 6.45e-16 77.4
Msa0743590 AT5G07100.4 46.250 80 42 1 185 263 123 202 1.57e-12 67.4
Msa0743590 AT5G07100.5 51.082 231 64 4 200 429 21 203 1.18e-69 223
Msa0743590 AT5G07100.5 46.512 86 44 1 358 441 15 100 6.45e-16 77.4
Msa0743590 AT5G07100.5 46.250 80 42 1 185 263 123 202 1.57e-12 67.4
Msa0743590 AT5G07100.3 51.082 231 64 4 200 429 21 203 1.18e-69 223
Msa0743590 AT5G07100.3 46.512 86 44 1 358 441 15 100 6.45e-16 77.4
Msa0743590 AT5G07100.3 46.250 80 42 1 185 263 123 202 1.57e-12 67.4
Msa0743590 AT3G01080.1 54.148 229 72 5 202 426 166 365 1.24e-69 230
Msa0743590 AT2G30250.1 52.381 231 104 3 200 428 163 389 2.05e-69 229
Msa0743590 AT2G04880.2 48.387 248 100 4 204 433 112 349 7.73e-67 224
Msa0743590 AT2G04880.1 44.610 269 103 4 204 433 112 373 3.80e-64 218
Msa0743590 AT2G04880.1 61.667 60 22 1 203 261 307 366 5.50e-17 84.3
Msa0743590 AT2G04880.1 48.438 64 32 1 365 428 109 171 1.95e-13 73.2
Msa0743590 AT2G37260.2 45.420 262 101 6 195 425 75 325 2.15e-57 196
Msa0743590 AT2G37260.2 55.738 61 26 1 368 428 84 143 8.68e-15 76.3
Msa0743590 AT2G37260.3 45.420 262 101 6 195 425 77 327 2.29e-57 196
Msa0743590 AT2G37260.3 55.738 61 26 1 368 428 86 145 8.67e-15 76.3
Msa0743590 AT2G37260.1 45.420 262 101 6 195 425 157 407 8.39e-57 196
Msa0743590 AT2G37260.1 55.738 61 26 1 368 428 166 225 1.06e-14 76.6
Msa0743590 AT4G30935.1 39.080 261 131 7 202 446 167 415 9.15e-47 170
Msa0743590 AT4G12020.6 44.500 200 102 4 197 387 462 661 1.36e-39 155
Msa0743590 AT4G12020.6 38.679 106 50 4 366 457 467 571 1.11e-12 71.6
Msa0743590 AT4G12020.8 44.500 200 102 4 197 387 462 661 1.36e-39 155
Msa0743590 AT4G12020.8 38.679 106 50 4 366 457 467 571 1.11e-12 71.6
Msa0743590 AT4G12020.3 44.500 200 102 4 197 387 462 661 1.52e-39 155
Msa0743590 AT4G12020.3 38.679 106 50 4 366 457 467 571 1.08e-12 71.6
Msa0743590 AT4G12020.1 44.500 200 102 4 197 387 462 661 1.63e-39 155
Msa0743590 AT4G12020.1 38.679 106 50 4 366 457 467 571 1.14e-12 71.6
Msa0743590 AT4G12020.9 44.500 200 102 4 197 387 462 661 1.63e-39 155
Msa0743590 AT4G12020.9 38.679 106 50 4 366 457 467 571 1.14e-12 71.6
Msa0743590 AT4G12020.2 44.500 200 102 4 197 387 462 661 1.77e-39 155
Msa0743590 AT4G12020.2 38.679 106 50 4 366 457 467 571 1.11e-12 71.6
Msa0743590 AT4G12020.7 44.500 200 102 4 197 387 462 661 1.77e-39 155
Msa0743590 AT4G12020.7 38.679 106 50 4 366 457 467 571 1.18e-12 71.6
Msa0743590 AT4G12020.10 44.500 200 102 4 197 387 462 661 1.78e-39 155
Msa0743590 AT4G12020.10 38.679 106 50 4 366 457 467 571 1.09e-12 71.6
Msa0743590 AT4G12020.11 44.500 200 102 4 197 387 462 661 1.81e-39 154
Msa0743590 AT4G12020.11 38.679 106 50 4 366 457 467 571 1.60e-12 71.2
Msa0743590 AT4G12020.4 44.500 200 102 4 197 387 462 661 1.90e-39 154
Msa0743590 AT4G12020.4 38.679 106 50 4 366 457 467 571 1.09e-12 71.6
Msa0743590 AT4G12020.5 44.500 200 102 4 197 387 395 594 2.08e-39 154
Msa0743590 AT4G12020.5 38.679 106 50 4 366 457 400 504 1.22e-12 71.6
Msa0743590 AT2G44745.1 57.143 91 38 1 344 434 122 211 9.19e-31 119
Msa0743590 AT2G44745.1 51.389 72 34 1 188 258 130 201 7.86e-15 74.3
Msa0743590 AT4G18170.1 45.833 144 54 2 347 472 152 289 1.56e-29 119
Msa0743590 AT4G18170.1 57.627 59 24 1 204 261 173 231 2.28e-14 74.7
Msa0743590 AT4G39410.1 63.158 76 28 0 348 423 204 279 3.35e-29 117
Msa0743590 AT4G39410.1 45.833 72 38 1 188 258 208 279 1.52e-11 65.9
Msa0743590 AT1G29860.1 62.821 78 29 0 351 428 120 197 3.72e-28 114
Msa0743590 AT1G29860.1 59.322 59 23 1 204 261 137 195 2.18e-14 74.3
Msa0743590 AT1G69310.4 64.474 76 27 0 348 423 128 203 1.43e-27 112
Msa0743590 AT1G69310.4 60.714 56 21 1 204 258 148 203 7.06e-14 72.8
Msa0743590 AT1G69310.2 64.474 76 27 0 348 423 128 203 1.43e-27 112
Msa0743590 AT1G69310.2 60.714 56 21 1 204 258 148 203 7.06e-14 72.8
Msa0743590 AT1G69310.1 64.474 76 27 0 348 423 128 203 1.43e-27 112
Msa0743590 AT1G69310.1 60.714 56 21 1 204 258 148 203 7.06e-14 72.8
Msa0743590 AT5G26170.1 62.857 70 26 0 354 423 100 169 2.24e-27 108
Msa0743590 AT5G26170.1 49.123 57 28 1 203 258 113 169 4.05e-11 62.4
Msa0743590 AT3G01080.3 68.000 75 22 1 202 276 204 276 4.42e-27 112
Msa0743590 AT3G01080.3 55.556 63 27 1 367 429 205 266 3.16e-16 80.5
Msa0743590 AT2G47260.1 63.158 76 28 0 351 426 158 233 8.01e-27 111
Msa0743590 AT2G47260.1 48.718 78 39 1 204 280 175 252 5.21e-14 73.9
Msa0743590 AT5G46350.1 58.750 80 33 0 353 432 169 248 1.32e-26 110
Msa0743590 AT5G46350.1 55.932 59 25 1 204 261 184 242 6.72e-14 73.6
Msa0743590 AT5G49520.1 61.842 76 29 0 351 426 205 280 1.83e-26 112
Msa0743590 AT5G49520.1 58.333 60 24 1 203 261 221 280 3.04e-14 75.1
Msa0743590 AT5G13080.1 58.667 75 31 0 354 428 54 128 4.79e-26 104
Msa0743590 AT5G13080.1 53.448 58 26 1 203 259 67 124 8.82e-15 72.0
Msa0743590 AT3G01970.1 53.933 89 41 0 354 442 52 140 5.59e-26 103
Msa0743590 AT3G01970.1 48.485 66 33 1 203 267 65 130 6.33e-14 69.7
Msa0743590 AT1G55600.1 62.667 75 28 0 354 428 294 368 7.58e-26 111
Msa0743590 AT1G55600.1 56.667 60 25 1 203 261 307 366 1.66e-14 76.6
Msa0743590 AT5G41570.1 60.563 71 28 0 353 423 84 154 5.10e-25 102
Msa0743590 AT5G41570.1 51.724 58 27 1 203 259 98 155 3.50e-13 68.6
Msa0743590 AT4G04450.2 57.500 80 33 1 350 428 181 260 1.04e-24 107
Msa0743590 AT1G64000.1 60.000 70 28 0 354 423 101 170 1.37e-24 101
Msa0743590 AT1G64000.1 51.724 58 27 1 203 259 114 171 9.89e-14 70.5
Msa0743590 AT5G64810.1 56.338 71 31 0 354 424 97 167 3.24e-24 100
Msa0743590 AT4G04450.1 57.500 80 33 1 350 428 275 354 4.67e-24 106
Msa0743590 AT2G46130.1 56.579 76 33 0 348 423 11 86 6.13e-24 97.1
Msa0743590 AT2G46130.1 46.154 78 41 1 183 259 10 87 6.47e-16 74.3
Msa0743590 AT1G62300.1 56.410 78 33 1 350 426 295 372 1.81e-23 104
Msa0743590 AT1G62300.1 37.000 100 57 3 168 261 273 372 2.67e-11 66.6
Msa0743590 AT4G22070.4 56.410 78 33 1 350 426 280 357 2.36e-23 104
Msa0743590 AT4G22070.3 56.410 78 33 1 350 426 280 357 2.36e-23 104
Msa0743590 AT4G22070.2 56.410 78 33 1 350 426 280 357 2.36e-23 104
Msa0743590 AT4G22070.1 56.410 78 33 1 350 426 280 357 2.36e-23 104
Msa0743590 AT1G69310.3 60.526 76 26 1 348 423 128 199 7.14e-23 99.4
Msa0743590 AT3G62340.1 59.459 74 30 0 353 426 104 177 1.97e-22 97.8
Msa0743590 AT3G62340.1 56.667 60 25 1 203 261 118 177 1.02e-13 72.0
Msa0743590 AT1G68150.1 55.128 78 34 1 351 427 219 296 2.65e-22 99.4
Msa0743590 AT1G68150.1 52.459 61 27 2 203 261 235 295 4.85e-12 68.2
Msa0743590 AT4G01720.1 54.430 79 35 1 349 426 221 299 3.94e-22 100
Msa0743590 AT5G15130.2 48.193 83 42 1 350 431 168 250 5.50e-22 99.8
Msa0743590 AT5G15130.2 50.820 61 28 2 203 261 185 245 6.37e-11 65.5
Msa0743590 AT5G15130.1 48.193 83 42 1 350 431 210 292 6.69e-22 99.8
Msa0743590 AT5G15130.1 50.820 61 28 2 203 261 227 287 7.10e-11 65.1
Msa0743590 AT1G18860.1 52.564 78 36 1 350 426 222 299 1.47e-21 98.6
Msa0743590 AT1G18860.1 52.459 61 27 2 203 261 239 299 8.04e-11 65.1
Msa0743590 AT2G21900.1 43.564 101 52 2 333 428 70 170 2.42e-21 92.8
Msa0743590 AT2G21900.1 50.000 60 29 1 203 261 109 168 4.21e-13 68.9
Msa0743590 AT5G43290.1 42.105 114 46 3 330 423 57 170 2.96e-20 91.3
Msa0743590 AT5G43290.1 47.872 94 43 3 166 258 82 170 2.17e-14 73.9
Msa0743590 AT2G23320.1 51.250 80 38 1 347 425 220 299 3.02e-20 92.4
Msa0743590 AT4G31550.2 56.000 75 32 1 351 424 229 303 3.31e-20 92.4
Msa0743590 AT4G31550.1 56.000 75 32 1 351 424 230 304 3.32e-20 92.4
Msa0743590 AT4G31800.2 37.097 124 61 3 366 485 110 220 7.42e-20 89.7
Msa0743590 AT4G31800.1 37.097 124 61 3 366 485 175 285 1.58e-19 90.1
Msa0743590 AT4G24240.1 51.852 81 35 2 346 425 263 340 2.00e-19 90.5
Msa0743590 AT2G46130.2 52.632 76 32 1 348 423 11 82 2.61e-19 84.0
Msa0743590 AT2G46130.2 42.308 78 40 2 183 259 10 83 2.60e-11 60.8
Msa0743590 AT1G80840.1 41.346 104 50 2 346 438 115 218 3.08e-19 89.0
Msa0743590 AT1G80840.1 26.667 210 133 5 57 261 13 206 7.39e-12 67.0
Msa0743590 AT5G28650.1 41.346 104 49 2 331 433 237 329 7.18e-19 88.6
Msa0743590 AT2G30590.1 54.054 74 33 1 351 423 297 370 7.48e-19 89.0
Msa0743590 AT4G23550.1 46.753 77 40 1 356 431 129 205 7.68e-19 87.8
Msa0743590 AT2G24570.1 55.405 74 32 1 351 423 227 300 9.53e-19 87.8
Msa0743590 AT2G25000.2 51.562 64 30 1 366 428 102 165 1.53e-18 85.5
Msa0743590 AT2G25000.4 51.562 64 30 1 366 428 102 165 1.53e-18 85.5
Msa0743590 AT3G04670.1 41.346 104 49 2 331 433 237 329 1.55e-18 87.4
Msa0743590 AT2G25000.3 51.562 64 30 1 366 428 124 187 3.53e-18 84.7
Msa0743590 AT2G25000.1 51.562 64 30 1 366 428 145 208 5.06e-18 84.7
Msa0743590 AT1G69810.2 44.444 90 46 3 350 437 128 215 3.28e-17 83.6
Msa0743590 AT1G69810.2 41.892 74 40 2 201 271 143 216 2.84e-11 65.5
Msa0743590 AT1G69810.1 44.444 90 46 3 350 437 186 273 4.40e-17 84.0
Msa0743590 AT1G69810.1 41.892 74 40 2 201 271 201 274 3.16e-11 65.9
Msa0743590 AT1G29280.1 49.231 65 32 1 368 431 75 139 1.89e-16 80.1
Msa0743590 AT1G29280.1 46.575 73 33 4 191 261 66 134 5.69e-11 63.5
Msa0743590 AT4G01250.1 53.846 65 29 1 368 431 129 193 2.27e-16 80.5
Msa0743590 AT3G58710.2 40.541 111 62 3 326 433 30 139 1.26e-15 77.8
Msa0743590 AT3G58710.1 49.275 69 32 2 368 433 72 140 3.17e-15 76.6
Msa0743590 AT5G52830.1 42.683 82 45 2 351 431 150 230 3.68e-15 77.4
Msa0743590 AT5G52830.1 48.387 62 30 2 202 261 164 225 8.38e-11 64.3
Msa0743590 AT2G34830.1 47.692 65 33 1 368 431 216 280 7.85e-15 77.4
Msa0743590 AT2G34830.2 47.692 65 33 1 368 431 225 289 7.98e-15 77.4
Msa0743590 AT1G30650.1 47.692 65 33 1 368 431 218 282 1.27e-14 76.6
Msa0743590 AT5G45050.1 47.692 65 33 1 368 431 1181 1245 1.31e-13 74.7
Msa0743590 AT5G45050.4 47.692 65 33 1 368 431 1042 1106 1.36e-13 74.7
Msa0743590 AT5G45050.2 47.692 65 33 1 368 431 1153 1217 1.41e-13 74.3
Msa0743590 AT4G23810.1 50.000 64 26 3 197 256 154 215 1.07e-12 69.7
Msa0743590 AT2G46400.1 35.922 103 53 2 322 421 69 161 4.61e-12 67.4
Msa0743590 AT2G40740.1 47.059 68 29 3 193 256 166 230 1.69e-11 65.9
Msa0743590 AT2G40740.1 43.056 72 35 2 367 432 173 244 1.94e-11 65.5
Msa0743590 AT4G11070.2 36.134 119 63 5 142 256 57 166 1.89e-11 65.5
Msa0743590 AT2G40740.3 43.056 72 35 2 367 432 182 253 2.28e-11 65.5
Msa0743590 AT2G40740.3 47.059 68 29 3 193 256 175 239 2.34e-11 65.5
Msa0743590 AT3G56400.1 34.615 104 55 3 362 452 115 218 2.84e-11 65.1
Msa0743590 AT4G11070.1 36.134 119 63 5 142 256 89 198 2.85e-11 65.5
Msa0743590 AT5G24110.1 48.276 58 26 2 203 256 113 170 4.09e-11 64.7
Msa0743590 AT1G66560.1 48.276 58 27 1 367 421 103 160 4.41e-11 63.9

Find 171 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTTGTTTGGTTGAGGTTT+AGG 0.208711 5_1:-64014892 None:intergenic
TCGACAGACAAGAATAAAAT+TGG 0.229290 5_1:+64016007 Msa0743590:CDS
GGATACCGCTGGCGTAAATA+TGG 0.253314 5_1:+64015402 Msa0743590:CDS
AAATGCTGCTATCCGAATTT+AGG 0.269734 5_1:+64016108 Msa0743590:CDS
TTCAATACCAGCACTGTTAA+TGG 0.270744 5_1:+64014298 Msa0743590:CDS
GGATACAATTGGCGAAAGTA+TGG 0.277636 5_1:+64014730 Msa0743590:CDS
CGATAACAGGGCATCTTCTT+TGG 0.279235 5_1:+64014957 Msa0743590:CDS
AACTGATTGCTCTGGACTAT+TGG 0.284827 5_1:-64015100 None:intergenic
TCAAGCTTTAAACTGTTCTA+TGG 0.285827 5_1:+64014234 Msa0743590:CDS
AATCACTGAGATAATATATA+AGG 0.289665 5_1:+64014855 Msa0743590:CDS
TACTGTAATAATAAATTTCA+TGG 0.302681 5_1:-64016323 None:intergenic
CACAAAGGCAACACTGCTAA+TGG 0.304713 5_1:+64014688 Msa0743590:CDS
TTGATTGCTATTCCTAAATT+CGG 0.328818 5_1:-64016120 None:intergenic
TCGAGAGTTAAGATAGAGAT+AGG 0.328824 5_1:-64012352 None:intergenic
CATTAGCAGTGTTGCCTTTG+TGG 0.336033 5_1:-64014687 None:intergenic
CTTTCCACGTGTTTCCTAAC+GGG 0.337493 5_1:-64015873 None:intergenic
TATGAGCGAAGTTGATATAT+TGG 0.356592 5_1:+64015374 Msa0743590:CDS
CCAGCAGAGTATCGGTTGTT+TGG 0.364215 5_1:-64014904 None:intergenic
AAGGAGAGAGATCCGATAAC+AGG 0.368713 5_1:+64014944 Msa0743590:CDS
CCCATTGATCCGAATCGAAC+TGG 0.370192 5_1:+64012427 Msa0743590:CDS
GCAGTGTTGCCTTTGTGGTT+AGG 0.370912 5_1:-64014682 None:intergenic
ATTATGAACAAACTTGAAAC+TGG 0.377335 5_1:-64016159 None:intergenic
CCCAGTTCGATTCGGATCAA+TGG 0.381738 5_1:-64012428 None:intergenic
CAAAGAAGATGCCCTGTTAT+CGG 0.382806 5_1:-64014956 None:intergenic
TTGAAGCATGCAGAAGTTAC+AGG 0.389514 5_1:-64014280 None:intergenic
TTTGAACAGGTGATGATGAT+AGG 0.389808 5_1:-64014612 None:intergenic
AACCATGGGAAGAATACTAA+TGG 0.391787 5_1:+64016298 Msa0743590:CDS
TAAACCACAAGATAGAAATA+TGG 0.401369 5_1:+64014345 Msa0743590:CDS
AACTGTTCTATGGCTTCTGC+TGG 0.409079 5_1:+64014244 Msa0743590:CDS
TATGTTGTAATTACAGCTTT+CGG 0.411726 5_1:-64015909 None:intergenic
GTGTTTCCTAACGGGGCAAC+CGG 0.414596 5_1:-64015865 None:intergenic
TCTACTCAAGTGGAAGGTTC+AGG 0.415708 5_1:+64014520 Msa0743590:CDS
GATCCGAATCGAACTGGGTC+GGG 0.420694 5_1:+64012433 Msa0743590:CDS
ACCATGGGAAGAATACTAAT+GGG 0.424995 5_1:+64016299 Msa0743590:CDS
AACAGTTTAAAGCTTGAAGA+AGG 0.428892 5_1:-64014228 None:intergenic
TATCCATCATTTGATGATTG+AGG 0.434013 5_1:-64014712 None:intergenic
GCAAGGATATACCTTGGGTT+AGG 0.435936 5_1:-64015447 None:intergenic
ATCTTCTCCATTAAATGAAA+AGG 0.439104 5_1:+64014561 Msa0743590:CDS
CGCTCCCGTCGATGTCAATT+CGG 0.440733 5_1:+64014654 Msa0743590:CDS
CTTCCCATGGTTTGTGAGCA+AGG 0.441194 5_1:-64016287 None:intergenic
CCCCATTAGTATTCTTCCCA+TGG 0.444938 5_1:-64016300 None:intergenic
ATCATCATCACCTGTTCAAA+TGG 0.445905 5_1:+64014615 Msa0743590:CDS
ACAAAGGCAACACTGCTAAT+GGG 0.447362 5_1:+64014689 Msa0743590:CDS
TTCATGTTTGAAAGAAGAAC+CGG 0.449237 5_1:-64012568 None:intergenic
CTCGAGATCGGAAGCTTCGC+CGG 0.450239 5_1:-64012490 None:intergenic
GAGTATCGGTTGTTTGGTTG+AGG 0.452499 5_1:-64014898 None:intergenic
TGACCCGACCCAGTTCGATT+CGG 0.453678 5_1:-64012436 None:intergenic
ATCACTGAGATAATATATAA+GGG 0.454298 5_1:+64014856 Msa0743590:CDS
CAAATGCCGGTTGCCCCGTT+AGG 0.456890 5_1:+64015859 Msa0743590:CDS
CGAGAGTTAAGATAGAGATA+GGG 0.456970 5_1:-64012351 None:intergenic
TATCCGAGAGCCACGGGTTG+TGG 0.458528 5_1:+64015344 Msa0743590:CDS
GACACAAATCCAGCACCATC+TGG 0.458624 5_1:-64015144 None:intergenic
GGGTGTCCCTTCGCCGGAGT+TGG 0.461210 5_1:-64012407 None:intergenic
CATCAAATGATGGATACAAT+TGG 0.461233 5_1:+64014719 Msa0743590:CDS
GTTGCCACAACTGATTGCTC+TGG 0.469396 5_1:-64015108 None:intergenic
TGTCCCTTCGCCGGAGTTGG+TGG 0.471029 5_1:-64012404 None:intergenic
GTATAGTCCGACGTCGTTGT+TGG 0.471201 5_1:+64012540 Msa0743590:CDS
CCAGTTCGATTCGGATCAAT+GGG 0.472051 5_1:-64012427 None:intergenic
AACAGGGCATCTTCTTTGGC+TGG 0.474402 5_1:+64014961 Msa0743590:CDS
TCTTCTTTGGCTGGCCGAGA+TGG 0.475333 5_1:+64014970 Msa0743590:CDS
ATTGTCTTCTTTGTCAGAGA+TGG 0.478079 5_1:-64012310 None:intergenic
ACCACCACCAACTCCGGCGA+AGG 0.482330 5_1:+64012400 Msa0743590:CDS
GGTTCTTCTTTCAAACATGA+AGG 0.483334 5_1:+64012570 Msa0743590:CDS
AATAACGGTTCAAATCCGTT+TGG 0.484421 5_1:+64016215 Msa0743590:CDS
ATACTATTAGTCTTGACCTT+GGG 0.486591 5_1:+64016039 Msa0743590:CDS
ATGGGAATCAGCTCCACGGC+TGG 0.488519 5_1:+64016062 Msa0743590:CDS
GACGTCGTTGTTGGAGTCTC+CGG 0.489196 5_1:+64012549 Msa0743590:CDS
CCCTTCGCCGGAGTTGGTGG+TGG 0.489782 5_1:-64012401 None:intergenic
CTGGAACTAACCATTTGAAC+AGG 0.490509 5_1:-64014625 None:intergenic
ATCAAACCCATCGTTTGTCC+TGG 0.491762 5_1:-64015169 None:intergenic
AGATAGAGATAGGGGTATAA+TGG 0.492748 5_1:-64012342 None:intergenic
ATCAATGGGTGTCCCTTCGC+CGG 0.493461 5_1:-64012413 None:intergenic
GTTGAGCCTTCACCGACTAC+AGG 0.494072 5_1:+64014202 Msa0743590:CDS
TCTAGAGAAAATAGAAATGA+TGG 0.497207 5_1:+64016239 Msa0743590:CDS
TCTTTCCACGTGTTTCCTAA+CGG 0.500924 5_1:-64015874 None:intergenic
GCTGTAATTACAACATATGA+AGG 0.501085 5_1:+64015915 Msa0743590:CDS
TACTACAGTGTTCTAAATAA+CGG 0.502889 5_1:+64016200 Msa0743590:CDS
ATTACCATATTTCTATCTTG+TGG 0.504868 5_1:-64014349 None:intergenic
TATTACAAATGTACAAATGC+CGG 0.506175 5_1:+64015846 Msa0743590:CDS
ATCATACCTTGGCTTTGAGA+AGG 0.507869 5_1:-64015202 None:intergenic
AATGGAGAAGATCGAAATGA+TGG 0.509457 5_1:-64014550 None:intergenic
GATACCGCTGGCGTAAATAT+GGG 0.511485 5_1:+64015403 Msa0743590:CDS
ATCGACGGGAGCGCTAGTGC+TGG 0.511862 5_1:-64014644 None:intergenic
GATACTATTAGTCTTGACCT+TGG 0.514318 5_1:+64016038 Msa0743590:CDS
ACATGGCTGTTGAAGTCTGC+AGG 0.515095 5_1:-64014487 None:intergenic
GAAGCAACCACCACCAACTC+CGG 0.517386 5_1:+64012394 Msa0743590:CDS
CAACGACGTCGGACTATACC+CGG 0.520778 5_1:-64012536 None:intergenic
TGGCGGGTATATAGCTTCAA+AGG 0.528848 5_1:+64016388 Msa0743590:three_prime_UTR
ATTAGTCTTGACCTTGGGAT+GGG 0.529726 5_1:+64016044 Msa0743590:CDS
TCATACCTTGGCTTTGAGAA+GGG 0.529778 5_1:-64015201 None:intergenic
GAGAGTTAAGATAGAGATAG+GGG 0.531870 5_1:-64012350 None:intergenic
CAAGTGGAAGGTTCAGGAAA+CGG 0.532286 5_1:+64014526 Msa0743590:CDS
TTTAGAACACTGTAGTATAC+CGG 0.534325 5_1:-64016194 None:intergenic
TATTAGTCTTGACCTTGGGA+TGG 0.534330 5_1:+64016043 Msa0743590:CDS
GTACCACAACCCGTGGCTCT+CGG 0.534490 5_1:-64015347 None:intergenic
AGTAGTAGCCATGACATGGC+AGG 0.536137 5_1:+64015969 Msa0743590:CDS
CCAAACAACCGATACTCTGC+TGG 0.537004 5_1:+64014904 Msa0743590:CDS
GGGCCTCAATCATCAAATGA+TGG 0.539104 5_1:+64014709 Msa0743590:CDS
AATTAGATTGAAAGTCAACC+TGG 0.539594 5_1:-64016515 None:intergenic
GATCTTAGTCCAGATGGTGC+TGG 0.542226 5_1:+64015135 Msa0743590:CDS
ACGGCTGGAAATAGATCGAA+TGG 0.543020 5_1:+64016077 Msa0743590:CDS
ATTCGATCTATTTCCAGCCG+TGG 0.544228 5_1:-64016075 None:intergenic
TATAGTAGTAGTATTGATAG+TGG 0.547018 5_1:+64016490 Msa0743590:three_prime_UTR
GGTGGTTGCTTCCATTGTGA+CGG 0.547944 5_1:-64012383 None:intergenic
ATGCACGGCGACCTCGAGAT+CGG 0.549767 5_1:-64012502 None:intergenic
ACAACCCGTGGCTCTCGGAT+AGG 0.549884 5_1:-64015342 None:intergenic
CCATTGATCCGAATCGAACT+GGG 0.550113 5_1:+64012428 Msa0743590:CDS
TAAGCCTATCCGAGAGCCAC+GGG 0.556300 5_1:+64015338 Msa0743590:CDS
GAAGTTGATATATTGGATGA+TGG 0.565114 5_1:+64015381 Msa0743590:CDS
TCATAATACTACCTCAGCTC+CGG 0.566675 5_1:+64016175 Msa0743590:CDS
TCATCCGAATTGACATCGAC+GGG 0.567171 5_1:-64014658 None:intergenic
AGGGACCCTGTAGTCGGTGA+AGG 0.567986 5_1:-64014208 None:intergenic
GATACAATTGGCGAAAGTAT+GGG 0.568812 5_1:+64014731 Msa0743590:CDS
ACAGTTTAAAGCTTGAAGAA+GGG 0.569142 5_1:-64014227 None:intergenic
ACAAATGATCTTAGTCCAGA+TGG 0.571624 5_1:+64015129 Msa0743590:CDS
CGATAACATCGCCGTCACAA+TGG 0.574088 5_1:+64012372 Msa0743590:exon
AAGATACAAGCTGATGTCGC+CGG 0.575531 5_1:+64012471 Msa0743590:CDS
TGTCAGAGATGGTGAGAGAG+TGG 0.576790 5_1:-64012299 None:intergenic
CCACCACCAACTCCGGCGAA+GGG 0.580167 5_1:+64012401 Msa0743590:CDS
TGGGTCGGGTCAAAATTCAA+TGG 0.582215 5_1:+64012447 Msa0743590:CDS
GGAAATAGATCGAATGGGCA+AGG 0.582572 5_1:+64016083 Msa0743590:CDS
TCTAGCCGGTATTACCATCT+CGG 0.583473 5_1:-64014984 None:intergenic
ATATGGGCAGAAGGTTGTGA+GGG 0.586496 5_1:+64015419 Msa0743590:CDS
GTAGTATTGATAGTGGCTCC+AGG 0.587040 5_1:+64016497 Msa0743590:three_prime_UTR
TGTCGACCAGGACAAACGAT+GGG 0.588080 5_1:+64015163 Msa0743590:CDS
TCTCGGATAGGCTTAACTAC+AGG 0.589498 5_1:-64015330 None:intergenic
TAACAGAACCAGCAGAGTAT+CGG 0.592680 5_1:-64014912 None:intergenic
GTGCTGGATTTGTGTCGACC+AGG 0.599764 5_1:+64015151 Msa0743590:CDS
GTATCCTTGCTCACAAACCA+TGG 0.602949 5_1:+64016283 Msa0743590:CDS
ATGATCCCTTCTCAAAGCCA+AGG 0.603638 5_1:+64015196 Msa0743590:CDS
TTGAGCCTTCACCGACTACA+GGG 0.605193 5_1:+64014203 Msa0743590:CDS
CCGTGCATCACAATACCCGC+CGG 0.606013 5_1:+64012517 Msa0743590:CDS
TTTCCACGTGTTTCCTAACG+GGG 0.607409 5_1:-64015872 None:intergenic
TGGAGCTGATTCCCATCCCA+AGG 0.608733 5_1:-64016055 None:intergenic
CTGGCGTAAATATGGGCAGA+AGG 0.610110 5_1:+64015410 Msa0743590:CDS
GAAATAGATCGAATGGGCAA+GGG 0.610553 5_1:+64016084 Msa0743590:CDS
TTAAGCCTATCCGAGAGCCA+CGG 0.611015 5_1:+64015337 Msa0743590:CDS
CGTGCATCACAATACCCGCC+GGG 0.611416 5_1:+64012518 Msa0743590:CDS
AATATGGGCAGAAGGTTGTG+AGG 0.611794 5_1:+64015418 Msa0743590:CDS
TTGCATGTCCTGCCATGTCA+TGG 0.612210 5_1:-64015977 None:intergenic
CGGCTGGAAATAGATCGAAT+GGG 0.612520 5_1:+64016078 Msa0743590:CDS
TTCATCCGAATTGACATCGA+CGG 0.614196 5_1:-64014659 None:intergenic
TGATCCGAATCGAACTGGGT+CGG 0.615553 5_1:+64012432 Msa0743590:CDS
GTGTCGACCAGGACAAACGA+TGG 0.617293 5_1:+64015162 Msa0743590:CDS
TATTGGATGATGGATACCGC+TGG 0.617305 5_1:+64015391 Msa0743590:CDS
CGGCGAAGCTTCCGATCTCG+AGG 0.618256 5_1:+64012491 Msa0743590:CDS
TGGCTACTACTCCTTGCGGC+AGG 0.622630 5_1:-64015957 None:intergenic
GTGAGCAAGGATACGCGGAA+TGG 0.624598 5_1:-64016274 None:intergenic
ATCATGATGTACCTGCCGCA+AGG 0.626676 5_1:+64015946 Msa0743590:CDS
AGGAGAGAGATCCGATAACA+GGG 0.627701 5_1:+64014945 Msa0743590:CDS
TATCCTTGCTCACAAACCAT+GGG 0.628514 5_1:+64016284 Msa0743590:CDS
TAGTCCAGAGCAATCAGTTG+TGG 0.629779 5_1:+64015104 Msa0743590:CDS
TGAAGAAGGGACCCTGTAGT+CGG 0.633505 5_1:-64014214 None:intergenic
AAGGAGTAGTAGCCATGACA+TGG 0.636348 5_1:+64015965 Msa0743590:CDS
CCGGCGGGTATTGTGATGCA+CGG 0.645844 5_1:-64012517 None:intergenic
TGAGGGGAAATCCTAACCCA+AGG 0.652567 5_1:+64015436 Msa0743590:CDS
TCTGCCCATATTTACGCCAG+CGG 0.654849 5_1:-64015407 None:intergenic
GTCATGGCTACTACTCCTTG+CGG 0.655788 5_1:-64015961 None:intergenic
GACGTCGGACTATACCCGGC+GGG 0.657888 5_1:-64012532 None:intergenic
GGTTTGTGAGCAAGGATACG+CGG 0.665746 5_1:-64016279 None:intergenic
ACTGTAGTATACCGGAGCTG+AGG 0.669005 5_1:-64016186 None:intergenic
TGGGATGGGAATCAGCTCCA+CGG 0.679215 5_1:+64016058 Msa0743590:CDS
TATGGGCAGAAGGTTGTGAG+GGG 0.687237 5_1:+64015420 Msa0743590:CDS
CCATGGGAAGAATACTAATG+GGG 0.691385 5_1:+64016300 Msa0743590:CDS
ATAGTCTGTACCACAACCCG+TGG 0.696081 5_1:-64015354 None:intergenic
TCGGATGAACCTAACCACAA+AGG 0.702575 5_1:+64014673 Msa0743590:CDS
GGAGACTCCAACAACGACGT+CGG 0.702898 5_1:-64012547 None:intergenic
GGTTCTGTTATGTCTACACA+AGG 0.712252 5_1:+64014925 Msa0743590:CDS
TTGCCCCGTTAGGAAACACG+TGG 0.715334 5_1:+64015869 Msa0743590:CDS
CGACGTCGGACTATACCCGG+CGG 0.765121 5_1:-64012533 None:intergenic
GTACATTTGTAATAGCTGCG+CGG 0.802944 5_1:-64014781 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTGAAAATGAAAAA+TGG + chr5_1:64012652-64012671 Msa0743590:intron 10.0%
!! AAAAATTGAAAATGAAAAAT+GGG + chr5_1:64012653-64012672 Msa0743590:intron 10.0%
!! AAAAAGTAGAAAATAAAAAA+TGG + chr5_1:64012968-64012987 Msa0743590:intron 10.0%
!! AAAAGTAGAAAATAAAAAAT+GGG + chr5_1:64012969-64012988 Msa0743590:intron 10.0%
!! TGAAATAAGTAATATTAAAA+TGG - chr5_1:64015025-64015044 None:intergenic 10.0%
!! TTATTTCAAAGAAAATAATT+TGG + chr5_1:64015037-64015056 Msa0743590:intron 10.0%
!! ATAGTAAAAAATATGTACTT+TGG + chr5_1:64012626-64012645 Msa0743590:intron 15.0%
!!! TAATAATCACTTTTTGTAAT+TGG + chr5_1:64012757-64012776 Msa0743590:intron 15.0%
!!! TGTTTTTTTACTTACAATAT+GGG + chr5_1:64012806-64012825 Msa0743590:intron 15.0%
!!! ATAAAAAGATTGTATTTTGA+GGG + chr5_1:64012903-64012922 Msa0743590:intron 15.0%
!! TAATTATCACTTTCTATAAA+TGG + chr5_1:64013086-64013105 Msa0743590:intron 15.0%
!! ATAAGAATTTATAACTTCAT+AGG - chr5_1:64013279-64013298 None:intergenic 15.0%
!!! TTTGTTTGATTTTGTTTTAA+CGG + chr5_1:64013544-64013563 Msa0743590:intron 15.0%
!!! TTTCCTTTTTTATTTGAAAT+CGG - chr5_1:64013904-64013923 None:intergenic 15.0%
!!! ATAAAAAAGGAAATATTTTC+AGG + chr5_1:64013911-64013930 Msa0743590:intron 15.0%
!! ATCTTATTATCATTCTTATT+TGG + chr5_1:64015816-64015835 Msa0743590:intron 15.0%
!! TACTGTAATAATAAATTTCA+TGG - chr5_1:64016326-64016345 None:intergenic 15.0%
!! AAAACAAAACATTCTACTTA+TGG - chr5_1:64012699-64012718 None:intergenic 20.0%
!!! AAGTAGAATGTTTTGTTTTT+TGG + chr5_1:64012700-64012719 Msa0743590:intron 20.0%
!!! CTGTTTTTTTACTTACAATA+TGG + chr5_1:64012805-64012824 Msa0743590:intron 20.0%
!!! AAATACAATCTTTTTATGAC+TGG - chr5_1:64012900-64012919 None:intergenic 20.0%
!!! CATAAAAAGATTGTATTTTG+AGG + chr5_1:64012902-64012921 Msa0743590:intron 20.0%
!!! TTGTTTTTTGTTGCTAATTT+TGG + chr5_1:64013029-64013048 Msa0743590:intron 20.0%
!! AAGTGATAATTAACTCTAAT+GGG - chr5_1:64013078-64013097 None:intergenic 20.0%
!! AAAGTGATAATTAACTCTAA+TGG - chr5_1:64013079-64013098 None:intergenic 20.0%
!!! ATTTATAACTTCATAGGTTT+TGG - chr5_1:64013273-64013292 None:intergenic 20.0%
!! TTTGATCCTTTATGTATTAA+TGG + chr5_1:64013359-64013378 Msa0743590:intron 20.0%
!!! TAATAAATCTTCCTTTTGAT+TGG + chr5_1:64013502-64013521 Msa0743590:intron 20.0%
!!! AACTTTTCCAAGATTTTTTT+TGG + chr5_1:64013806-64013825 Msa0743590:intron 20.0%
!! ATTCCGATTTCAAATAAAAA+AGG + chr5_1:64013898-64013917 Msa0743590:intron 20.0%
!!! TTTGAAATCAGTAATAACTA+TGG - chr5_1:64014052-64014071 None:intergenic 20.0%
!!! ATAGTTATTACTGATTTCAA+AGG + chr5_1:64014051-64014070 Msa0743590:intron 20.0%
!! TAATACTAAACTACAATTCT+CGG - chr5_1:64014162-64014181 None:intergenic 20.0%
!! ACACTTTGATGAAAATAAAT+TGG + chr5_1:64014383-64014402 Msa0743590:intron 20.0%
!! AATCACTGAGATAATATATA+AGG + chr5_1:64014855-64014874 Msa0743590:CDS 20.0%
!! ATCACTGAGATAATATATAA+GGG + chr5_1:64014856-64014875 Msa0743590:CDS 20.0%
!!! TTTTTTATTGAGCAGAAAAA+TGG + chr5_1:64015284-64015303 Msa0743590:intron 20.0%
!! ACAAAAGACATATGTTAAAT+TGG - chr5_1:64015508-64015527 None:intergenic 20.0%
!! GTATGTTTATAATCATTGAT+GGG - chr5_1:64015753-64015772 None:intergenic 20.0%
!! TGTATGTTTATAATCATTGA+TGG - chr5_1:64015754-64015773 None:intergenic 20.0%
!!! AAAAAATCTCATTTTCTGTA+AGG + chr5_1:64016413-64016432 Msa0743590:three_prime_UTR 20.0%
! GTAAAAAATATGTACTTTGG+AGG + chr5_1:64012629-64012648 Msa0743590:intron 25.0%
! AAGTGATTATTAACTCTAGT+GGG - chr5_1:64012749-64012768 None:intergenic 25.0%
! AAAGTGATTATTAACTCTAG+TGG - chr5_1:64012750-64012769 None:intergenic 25.0%
!!! TTTTTTACTTACAATATGGG+TGG + chr5_1:64012809-64012828 Msa0743590:intron 25.0%
! TTGTGTAATTGTGTTATCTT+AGG + chr5_1:64012943-64012962 Msa0743590:intron 25.0%
! AAACAACAACATTCTACTAA+TGG - chr5_1:64013015-64013034 None:intergenic 25.0%
! AGCAGCTAAAATTGTATATA+TGG + chr5_1:64013157-64013176 Msa0743590:intron 25.0%
! GCAGCTAAAATTGTATATAT+GGG + chr5_1:64013158-64013177 Msa0743590:intron 25.0%
! CAGCTAAAATTGTATATATG+GGG + chr5_1:64013159-64013178 Msa0743590:intron 25.0%
! TCCTTTATGTATTAATGGTT+AGG + chr5_1:64013364-64013383 Msa0743590:intron 25.0%
! ACCTAACCATTAATACATAA+AGG - chr5_1:64013368-64013387 None:intergenic 25.0%
! AAAATCAATCCACTAATCAT+TGG - chr5_1:64013641-64013660 None:intergenic 25.0%
! TGCTGAAAGAATATAGTATA+AGG + chr5_1:64013670-64013689 Msa0743590:intron 25.0%
! TGTCATAAAGATATGTGAAA+AGG + chr5_1:64013695-64013714 Msa0743590:intron 25.0%
! ATTCTGTGCTATATTCATAT+TGG + chr5_1:64013780-64013799 Msa0743590:intron 25.0%
! CTTGTAACCAAAAAAAATCT+TGG - chr5_1:64013816-64013835 None:intergenic 25.0%
! TTTGTTTATGCTCAATTGTA+GGG + chr5_1:64013947-64013966 Msa0743590:intron 25.0%
!!! AATCTATACTAGGTTGTTTT+TGG + chr5_1:64013994-64014013 Msa0743590:intron 25.0%
! TAAACCACAAGATAGAAATA+TGG + chr5_1:64014345-64014364 Msa0743590:CDS 25.0%
!! ATTACCATATTTCTATCTTG+TGG - chr5_1:64014352-64014371 None:intergenic 25.0%
! TTAAAATGAGTGAATAGCAT+TGG - chr5_1:64014463-64014482 None:intergenic 25.0%
!! AATGCTATTCACTCATTTTA+AGG + chr5_1:64014462-64014481 Msa0743590:intron 25.0%
! ATCTTCTCCATTAAATGAAA+AGG + chr5_1:64014561-64014580 Msa0743590:CDS 25.0%
! ATAATTAAGGTCAAATGTCT+AGG + chr5_1:64015223-64015242 Msa0743590:intron 25.0%
! TCTTAATCTGTAGTGTTTAT+TGG + chr5_1:64015543-64015562 Msa0743590:intron 25.0%
!! TATTATCATTCTTATTTGGC+AGG + chr5_1:64015820-64015839 Msa0743590:intron 25.0%
! TATTACAAATGTACAAATGC+CGG + chr5_1:64015846-64015865 Msa0743590:CDS 25.0%
! TATGTTGTAATTACAGCTTT+CGG - chr5_1:64015912-64015931 None:intergenic 25.0%
!! TTGATTGCTATTCCTAAATT+CGG - chr5_1:64016123-64016142 None:intergenic 25.0%
! ATTATGAACAAACTTGAAAC+TGG - chr5_1:64016162-64016181 None:intergenic 25.0%
!! TACTACAGTGTTCTAAATAA+CGG + chr5_1:64016200-64016219 Msa0743590:CDS 25.0%
! TCTAGAGAAAATAGAAATGA+TGG + chr5_1:64016239-64016258 Msa0743590:CDS 25.0%
!!! TATAGTAGTAGTATTGATAG+TGG + chr5_1:64016490-64016509 Msa0743590:three_prime_UTR 25.0%
TTCATGTTTGAAAGAAGAAC+CGG - chr5_1:64012571-64012590 None:intergenic 30.0%
! TCAGTTTTCGAAGTGTAATT+TGG + chr5_1:64012593-64012612 Msa0743590:intron 30.0%
!! TTTTGAGGGAGAATTTTCAA+AGG + chr5_1:64012917-64012936 Msa0743590:intron 30.0%
! TTTGAGGGAGAATTTTCAAA+GGG + chr5_1:64012918-64012937 Msa0743590:intron 30.0%
CTAAAATTGTATATATGGGG+TGG + chr5_1:64013162-64013181 Msa0743590:intron 30.0%
CTTCCAAAAGATAACATTTG+AGG - chr5_1:64013197-64013216 None:intergenic 30.0%
! CTCAAATGTTATCTTTTGGA+AGG + chr5_1:64013195-64013214 Msa0743590:intron 30.0%
! TGTGCCTTAGAATTTTGTAT+TGG + chr5_1:64013397-64013416 Msa0743590:intron 30.0%
GCATCCAATACAAAATTCTA+AGG - chr5_1:64013404-64013423 None:intergenic 30.0%
GCTTAAACACTGTATTATGT+TGG + chr5_1:64013429-64013448 Msa0743590:intron 30.0%
TAGAAGAATCCAGATGTTAA+TGG + chr5_1:64013729-64013748 Msa0743590:intron 30.0%
ACAGATTAAGACCATTATTC+AGG - chr5_1:64013755-64013774 None:intergenic 30.0%
! CTTTGTTTATGCTCAATTGT+AGG + chr5_1:64013946-64013965 Msa0743590:intron 30.0%
CTTGCTGATAAATCTATACT+AGG + chr5_1:64013984-64014003 Msa0743590:intron 30.0%
! CAGATGATTTTGTATATGCT+CGG + chr5_1:64014023-64014042 Msa0743590:intron 30.0%
!! TCAATTGATTGCTGTTTGTT+TGG + chr5_1:64014074-64014093 Msa0743590:intron 30.0%
!! CAATTGATTGCTGTTTGTTT+GGG + chr5_1:64014075-64014094 Msa0743590:intron 30.0%
!! AATTGATTGCTGTTTGTTTG+GGG + chr5_1:64014076-64014095 Msa0743590:intron 30.0%
TATTTGTTTCATTGCTTTGC+AGG + chr5_1:64014180-64014199 Msa0743590:intron 30.0%
! ACAGTTTAAAGCTTGAAGAA+GGG - chr5_1:64014230-64014249 None:intergenic 30.0%
! AACAGTTTAAAGCTTGAAGA+AGG - chr5_1:64014231-64014250 None:intergenic 30.0%
!! TCAAGCTTTAAACTGTTCTA+TGG + chr5_1:64014234-64014253 Msa0743590:CDS 30.0%
! GCTATCTCCTTTTCATTTAA+TGG - chr5_1:64014571-64014590 None:intergenic 30.0%
! TATCCATCATTTGATGATTG+AGG - chr5_1:64014715-64014734 None:intergenic 30.0%
!! CATCAAATGATGGATACAAT+TGG + chr5_1:64014719-64014738 Msa0743590:CDS 30.0%
TATGGGCAAAAACATGTTAA+AGG + chr5_1:64014748-64014767 Msa0743590:CDS 30.0%
ATGGGCAAAAACATGTTAAA+GGG + chr5_1:64014749-64014768 Msa0743590:CDS 30.0%
!!! AGTTTTTTCACTTCACAGTT+AGG - chr5_1:64014811-64014830 None:intergenic 30.0%
AAGCCAAGGTATGATAATTA+AGG + chr5_1:64015210-64015229 Msa0743590:intron 30.0%
TGACCTTAATTATCATACCT+TGG - chr5_1:64015216-64015235 None:intergenic 30.0%
!! TATGAGCGAAGTTGATATAT+TGG + chr5_1:64015374-64015393 Msa0743590:CDS 30.0%
!! GAAGTTGATATATTGGATGA+TGG + chr5_1:64015381-64015400 Msa0743590:CDS 30.0%
GTATATCCTTGCATGAAATT+AGG + chr5_1:64015458-64015477 Msa0743590:intron 30.0%
CTATTTCCTAATTTCATGCA+AGG - chr5_1:64015467-64015486 None:intergenic 30.0%
!! TGATGGGTTTGATGAAATTA+CGG - chr5_1:64015737-64015756 None:intergenic 30.0%
GCTGTAATTACAACATATGA+AGG + chr5_1:64015915-64015934 Msa0743590:CDS 30.0%
TCGACAGACAAGAATAAAAT+TGG + chr5_1:64016007-64016026 Msa0743590:CDS 30.0%
!! ATACTATTAGTCTTGACCTT+GGG + chr5_1:64016039-64016058 Msa0743590:CDS 30.0%
! TTTAGAACACTGTAGTATAC+CGG - chr5_1:64016197-64016216 None:intergenic 30.0%
!!! CTATTTTCTCTAGAACCAAA+CGG - chr5_1:64016233-64016252 None:intergenic 30.0%
!!! AGTAGCATTGTGTTGTTTTT+TGG + chr5_1:64016368-64016387 Msa0743590:three_prime_UTR 30.0%
AATTAGATTGAAAGTCAACC+TGG - chr5_1:64016518-64016537 None:intergenic 30.0%
ATTGTCTTCTTTGTCAGAGA+TGG - chr5_1:64012313-64012332 None:intergenic 35.0%
! AGATAGAGATAGGGGTATAA+TGG - chr5_1:64012345-64012364 None:intergenic 35.0%
GAGAGTTAAGATAGAGATAG+GGG - chr5_1:64012353-64012372 None:intergenic 35.0%
CGAGAGTTAAGATAGAGATA+GGG - chr5_1:64012354-64012373 None:intergenic 35.0%
TCGAGAGTTAAGATAGAGAT+AGG - chr5_1:64012355-64012374 None:intergenic 35.0%
GGTTCTTCTTTCAAACATGA+AGG + chr5_1:64012570-64012589 Msa0743590:CDS 35.0%
! TTTCGAAGTGTAATTTGGTG+AGG + chr5_1:64012598-64012617 Msa0743590:intron 35.0%
! TTCGAAGTGTAATTTGGTGA+GGG + chr5_1:64012599-64012618 Msa0743590:intron 35.0%
!! TGGTCTCAAATCTTAGCTTT+TGG + chr5_1:64012836-64012855 Msa0743590:intron 35.0%
!! GGTCTCAAATCTTAGCTTTT+GGG + chr5_1:64012837-64012856 Msa0743590:intron 35.0%
! TGGCCTCAAATGTTATCTTT+TGG + chr5_1:64013191-64013210 Msa0743590:intron 35.0%
!!! TCTTCCTTTTGATTGGTTTC+TGG + chr5_1:64013509-64013528 Msa0743590:intron 35.0%
!! TTGTTTTGTACTGCACTAAG+TGG + chr5_1:64013594-64013613 Msa0743590:intron 35.0%
AATGCTTTGCCAATGATTAG+TGG + chr5_1:64013629-64013648 Msa0743590:intron 35.0%
TTATTCAGGCCATTAACATC+TGG - chr5_1:64013741-64013760 None:intergenic 35.0%
GATGTTAATGGCCTGAATAA+TGG + chr5_1:64013741-64013760 Msa0743590:intron 35.0%
!! ATTGATTGCTGTTTGTTTGG+GGG + chr5_1:64014077-64014096 Msa0743590:intron 35.0%
TTCAATACCAGCACTGTTAA+TGG + chr5_1:64014298-64014317 Msa0743590:CDS 35.0%
! GAGTAGATTTTTCGCTAACA+TGG - chr5_1:64014507-64014526 None:intergenic 35.0%
TAGCGAAAAATCTACTCAAG+TGG + chr5_1:64014510-64014529 Msa0743590:CDS 35.0%
GAAAAATCTACTCAAGTGGA+AGG + chr5_1:64014514-64014533 Msa0743590:CDS 35.0%
AATGGAGAAGATCGAAATGA+TGG - chr5_1:64014553-64014572 None:intergenic 35.0%
! TTTGAACAGGTGATGATGAT+AGG - chr5_1:64014615-64014634 None:intergenic 35.0%
ATCATCATCACCTGTTCAAA+TGG + chr5_1:64014615-64014634 Msa0743590:CDS 35.0%
! GATACAATTGGCGAAAGTAT+GGG + chr5_1:64014731-64014750 Msa0743590:CDS 35.0%
ACAAATGATCTTAGTCCAGA+TGG + chr5_1:64015129-64015148 Msa0743590:CDS 35.0%
TTGAGCAGAAAAATGGAACT+CGG + chr5_1:64015291-64015310 Msa0743590:intron 35.0%
TTCATGCAAGGATATACCTT+GGG - chr5_1:64015455-64015474 None:intergenic 35.0%
TTTCATGCAAGGATATACCT+TGG - chr5_1:64015456-64015475 None:intergenic 35.0%
!! GATACTATTAGTCTTGACCT+TGG + chr5_1:64016038-64016057 Msa0743590:CDS 35.0%
AAATGCTGCTATCCGAATTT+AGG + chr5_1:64016108-64016127 Msa0743590:CDS 35.0%
AATAACGGTTCAAATCCGTT+TGG + chr5_1:64016215-64016234 Msa0743590:CDS 35.0%
AACCATGGGAAGAATACTAA+TGG + chr5_1:64016298-64016317 Msa0743590:CDS 35.0%
ACCATGGGAAGAATACTAAT+GGG + chr5_1:64016299-64016318 Msa0743590:CDS 35.0%
!!! AGCATTGTGTTGTTTTTTGG+CGG + chr5_1:64016371-64016390 Msa0743590:three_prime_UTR 35.0%
AATTCGACACGAGACTAAAC+AGG - chr5_1:64013308-64013327 None:intergenic 40.0%
GAAGCCAGAAACCAATCAAA+AGG - chr5_1:64013516-64013535 None:intergenic 40.0%
TTGAAGCATGCAGAAGTTAC+AGG - chr5_1:64014283-64014302 None:intergenic 40.0%
! TTTTCTGCCATTAACAGTGC+TGG - chr5_1:64014308-64014327 None:intergenic 40.0%
CTGGAACTAACCATTTGAAC+AGG - chr5_1:64014628-64014647 None:intergenic 40.0%
TTCATCCGAATTGACATCGA+CGG - chr5_1:64014662-64014681 None:intergenic 40.0%
ACAAAGGCAACACTGCTAAT+GGG + chr5_1:64014689-64014708 Msa0743590:CDS 40.0%
GGATACAATTGGCGAAAGTA+TGG + chr5_1:64014730-64014749 Msa0743590:CDS 40.0%
GTACATTTGTAATAGCTGCG+CGG - chr5_1:64014784-64014803 None:intergenic 40.0%
! CTTTTTGAACGCTCTCATGA+TGG + chr5_1:64014829-64014848 Msa0743590:CDS 40.0%
TAACAGAACCAGCAGAGTAT+CGG - chr5_1:64014915-64014934 None:intergenic 40.0%
GGTTCTGTTATGTCTACACA+AGG + chr5_1:64014925-64014944 Msa0743590:CDS 40.0%
CAAAGAAGATGCCCTGTTAT+CGG - chr5_1:64014959-64014978 None:intergenic 40.0%
! AACTGATTGCTCTGGACTAT+TGG - chr5_1:64015103-64015122 None:intergenic 40.0%
!! TCATACCTTGGCTTTGAGAA+GGG - chr5_1:64015204-64015223 None:intergenic 40.0%
!! ATCATACCTTGGCTTTGAGA+AGG - chr5_1:64015205-64015224 None:intergenic 40.0%
TGTGCTTGCTTTCTGACAAA+TGG + chr5_1:64015260-64015279 Msa0743590:intron 40.0%
TGGGTTTGATGAAATTACGG+TGG - chr5_1:64015734-64015753 None:intergenic 40.0%
TCTTTCCACGTGTTTCCTAA+CGG - chr5_1:64015877-64015896 None:intergenic 40.0%
!! TATTAGTCTTGACCTTGGGA+TGG + chr5_1:64016043-64016062 Msa0743590:CDS 40.0%
!! ATTAGTCTTGACCTTGGGAT+GGG + chr5_1:64016044-64016063 Msa0743590:CDS 40.0%
GAAATAGATCGAATGGGCAA+GGG + chr5_1:64016084-64016103 Msa0743590:CDS 40.0%
TCATAATACTACCTCAGCTC+CGG + chr5_1:64016175-64016194 Msa0743590:CDS 40.0%
TATCCTTGCTCACAAACCAT+GGG + chr5_1:64016284-64016303 Msa0743590:CDS 40.0%
CCATGGGAAGAATACTAATG+GGG + chr5_1:64016300-64016319 Msa0743590:CDS 40.0%
!!! GCATTGTGTTGTTTTTTGGC+GGG + chr5_1:64016372-64016391 Msa0743590:three_prime_UTR 40.0%
!! CCAGTTCGATTCGGATCAAT+GGG - chr5_1:64012430-64012449 None:intergenic 45.0%
CCATTGATCCGAATCGAACT+GGG + chr5_1:64012428-64012447 Msa0743590:CDS 45.0%
TGGGTCGGGTCAAAATTCAA+TGG + chr5_1:64012447-64012466 Msa0743590:CDS 45.0%
AAGATACAAGCTGATGTCGC+CGG + chr5_1:64012471-64012490 Msa0743590:CDS 45.0%
CTTACAATATGGGTGGTGAG+TGG + chr5_1:64012816-64012835 Msa0743590:intron 45.0%
TATATATGGGGTGGTGTGAG+TGG + chr5_1:64013171-64013190 Msa0743590:intron 45.0%
TTATCAGCAAGCAATGCGAG+CGG - chr5_1:64013975-64013994 None:intergenic 45.0%
! TGCTGTTTGTTTGGGGGTTT+AGG + chr5_1:64014083-64014102 Msa0743590:intron 45.0%
GCTGTTTGTTTGGGGGTTTA+GGG + chr5_1:64014084-64014103 Msa0743590:intron 45.0%
AACTGTTCTATGGCTTCTGC+TGG + chr5_1:64014244-64014263 Msa0743590:CDS 45.0%
TCTACTCAAGTGGAAGGTTC+AGG + chr5_1:64014520-64014539 Msa0743590:CDS 45.0%
CAAGTGGAAGGTTCAGGAAA+CGG + chr5_1:64014526-64014545 Msa0743590:CDS 45.0%
TCATCCGAATTGACATCGAC+GGG - chr5_1:64014661-64014680 None:intergenic 45.0%
TCGGATGAACCTAACCACAA+AGG + chr5_1:64014673-64014692 Msa0743590:CDS 45.0%
CATTAGCAGTGTTGCCTTTG+TGG - chr5_1:64014690-64014709 None:intergenic 45.0%
CACAAAGGCAACACTGCTAA+TGG + chr5_1:64014688-64014707 Msa0743590:CDS 45.0%
GGGCCTCAATCATCAAATGA+TGG + chr5_1:64014709-64014728 Msa0743590:CDS 45.0%
CGGTTGTTTGGTTGAGGTTT+AGG - chr5_1:64014895-64014914 None:intergenic 45.0%
!! GAGTATCGGTTGTTTGGTTG+AGG - chr5_1:64014901-64014920 None:intergenic 45.0%
AAGGAGAGAGATCCGATAAC+AGG + chr5_1:64014944-64014963 Msa0743590:CDS 45.0%
AGGAGAGAGATCCGATAACA+GGG + chr5_1:64014945-64014964 Msa0743590:CDS 45.0%
! CGATAACAGGGCATCTTCTT+TGG + chr5_1:64014957-64014976 Msa0743590:CDS 45.0%
TCTAGCCGGTATTACCATCT+CGG - chr5_1:64014987-64015006 None:intergenic 45.0%
AGCAACGAGAAACATCTAGC+CGG - chr5_1:64015001-64015020 None:intergenic 45.0%
TAGTCCAGAGCAATCAGTTG+TGG + chr5_1:64015104-64015123 Msa0743590:CDS 45.0%
ATCAAACCCATCGTTTGTCC+TGG - chr5_1:64015172-64015191 None:intergenic 45.0%
ATGATCCCTTCTCAAAGCCA+AGG + chr5_1:64015196-64015215 Msa0743590:CDS 45.0%
TCTCGGATAGGCTTAACTAC+AGG - chr5_1:64015333-64015352 None:intergenic 45.0%
!! TATTGGATGATGGATACCGC+TGG + chr5_1:64015391-64015410 Msa0743590:CDS 45.0%
GATACCGCTGGCGTAAATAT+GGG + chr5_1:64015403-64015422 Msa0743590:CDS 45.0%
AATATGGGCAGAAGGTTGTG+AGG + chr5_1:64015418-64015437 Msa0743590:CDS 45.0%
ATATGGGCAGAAGGTTGTGA+GGG + chr5_1:64015419-64015438 Msa0743590:CDS 45.0%
GCAAGGATATACCTTGGGTT+AGG - chr5_1:64015450-64015469 None:intergenic 45.0%
TTTCCACGTGTTTCCTAACG+GGG - chr5_1:64015875-64015894 None:intergenic 45.0%
CTTTCCACGTGTTTCCTAAC+GGG - chr5_1:64015876-64015895 None:intergenic 45.0%
AAGGAGTAGTAGCCATGACA+TGG + chr5_1:64015965-64015984 Msa0743590:CDS 45.0%
ATTCGATCTATTTCCAGCCG+TGG - chr5_1:64016078-64016097 None:intergenic 45.0%
ACGGCTGGAAATAGATCGAA+TGG + chr5_1:64016077-64016096 Msa0743590:CDS 45.0%
CGGCTGGAAATAGATCGAAT+GGG + chr5_1:64016078-64016097 Msa0743590:CDS 45.0%
GGAAATAGATCGAATGGGCA+AGG + chr5_1:64016083-64016102 Msa0743590:CDS 45.0%
GTATCCTTGCTCACAAACCA+TGG + chr5_1:64016283-64016302 Msa0743590:CDS 45.0%
CCCCATTAGTATTCTTCCCA+TGG - chr5_1:64016303-64016322 None:intergenic 45.0%
! TGGCGGGTATATAGCTTCAA+AGG + chr5_1:64016388-64016407 Msa0743590:three_prime_UTR 45.0%
!! GTAGTATTGATAGTGGCTCC+AGG + chr5_1:64016497-64016516 Msa0743590:three_prime_UTR 45.0%
TGTCAGAGATGGTGAGAGAG+TGG - chr5_1:64012302-64012321 None:intergenic 50.0%
CGATAACATCGCCGTCACAA+TGG + chr5_1:64012372-64012391 Msa0743590:exon 50.0%
GGTGGTTGCTTCCATTGTGA+CGG - chr5_1:64012386-64012405 None:intergenic 50.0%
CCCATTGATCCGAATCGAAC+TGG + chr5_1:64012427-64012446 Msa0743590:CDS 50.0%
!! CCCAGTTCGATTCGGATCAA+TGG - chr5_1:64012431-64012450 None:intergenic 50.0%
TGATCCGAATCGAACTGGGT+CGG + chr5_1:64012432-64012451 Msa0743590:CDS 50.0%
GTATAGTCCGACGTCGTTGT+TGG + chr5_1:64012540-64012559 Msa0743590:CDS 50.0%
! TTGAGCCTTCACCGACTACA+GGG + chr5_1:64014203-64014222 Msa0743590:CDS 50.0%
TGAAGAAGGGACCCTGTAGT+CGG - chr5_1:64014217-64014236 None:intergenic 50.0%
ACATGGCTGTTGAAGTCTGC+AGG - chr5_1:64014490-64014509 None:intergenic 50.0%
GCAGTGTTGCCTTTGTGGTT+AGG - chr5_1:64014685-64014704 None:intergenic 50.0%
!! CCAGCAGAGTATCGGTTGTT+TGG - chr5_1:64014907-64014926 None:intergenic 50.0%
CCAAACAACCGATACTCTGC+TGG + chr5_1:64014904-64014923 Msa0743590:CDS 50.0%
! AACAGGGCATCTTCTTTGGC+TGG + chr5_1:64014961-64014980 Msa0743590:CDS 50.0%
GTTGCCACAACTGATTGCTC+TGG - chr5_1:64015111-64015130 None:intergenic 50.0%
GATCTTAGTCCAGATGGTGC+TGG + chr5_1:64015135-64015154 Msa0743590:CDS 50.0%
GACACAAATCCAGCACCATC+TGG - chr5_1:64015147-64015166 None:intergenic 50.0%
TGTCGACCAGGACAAACGAT+GGG + chr5_1:64015163-64015182 Msa0743590:CDS 50.0%
TTAAGCCTATCCGAGAGCCA+CGG + chr5_1:64015337-64015356 Msa0743590:CDS 50.0%
ATAGTCTGTACCACAACCCG+TGG - chr5_1:64015357-64015376 None:intergenic 50.0%
GGATACCGCTGGCGTAAATA+TGG + chr5_1:64015402-64015421 Msa0743590:CDS 50.0%
TCTGCCCATATTTACGCCAG+CGG - chr5_1:64015410-64015429 None:intergenic 50.0%
CTGGCGTAAATATGGGCAGA+AGG + chr5_1:64015410-64015429 Msa0743590:CDS 50.0%
TATGGGCAGAAGGTTGTGAG+GGG + chr5_1:64015420-64015439 Msa0743590:CDS 50.0%
TGAGGGGAAATCCTAACCCA+AGG + chr5_1:64015436-64015455 Msa0743590:CDS 50.0%
ACATGCACTTAGTCAGCAGC+AGG - chr5_1:64015686-64015705 None:intergenic 50.0%
ATCATGATGTACCTGCCGCA+AGG + chr5_1:64015946-64015965 Msa0743590:CDS 50.0%
GTCATGGCTACTACTCCTTG+CGG - chr5_1:64015964-64015983 None:intergenic 50.0%
AGTAGTAGCCATGACATGGC+AGG + chr5_1:64015969-64015988 Msa0743590:CDS 50.0%
TTGCATGTCCTGCCATGTCA+TGG - chr5_1:64015980-64015999 None:intergenic 50.0%
ACTGTAGTATACCGGAGCTG+AGG - chr5_1:64016189-64016208 None:intergenic 50.0%
GGTTTGTGAGCAAGGATACG+CGG - chr5_1:64016282-64016301 None:intergenic 50.0%
! CTTCCCATGGTTTGTGAGCA+AGG - chr5_1:64016290-64016309 None:intergenic 50.0%
GAAGCAACCACCACCAACTC+CGG + chr5_1:64012394-64012413 Msa0743590:CDS 55.0%
ATCAATGGGTGTCCCTTCGC+CGG - chr5_1:64012416-64012435 None:intergenic 55.0%
GATCCGAATCGAACTGGGTC+GGG + chr5_1:64012433-64012452 Msa0743590:CDS 55.0%
TGACCCGACCCAGTTCGATT+CGG - chr5_1:64012439-64012458 None:intergenic 55.0%
CAACGACGTCGGACTATACC+CGG - chr5_1:64012539-64012558 None:intergenic 55.0%
GGAGACTCCAACAACGACGT+CGG - chr5_1:64012550-64012569 None:intergenic 55.0%
GACGTCGTTGTTGGAGTCTC+CGG + chr5_1:64012549-64012568 Msa0743590:CDS 55.0%
! GTTGAGCCTTCACCGACTAC+AGG + chr5_1:64014202-64014221 Msa0743590:CDS 55.0%
CGCTCCCGTCGATGTCAATT+CGG + chr5_1:64014654-64014673 Msa0743590:CDS 55.0%
! TCTTCTTTGGCTGGCCGAGA+TGG + chr5_1:64014970-64014989 Msa0743590:CDS 55.0%
GCTGGCCGAGATGGTAATAC+CGG + chr5_1:64014979-64014998 Msa0743590:intron 55.0%
! GTGCTGGATTTGTGTCGACC+AGG + chr5_1:64015151-64015170 Msa0743590:CDS 55.0%
! GTGTCGACCAGGACAAACGA+TGG + chr5_1:64015162-64015181 Msa0743590:CDS 55.0%
TAAGCCTATCCGAGAGCCAC+GGG + chr5_1:64015338-64015357 Msa0743590:CDS 55.0%
GTGTTTCCTAACGGGGCAAC+CGG - chr5_1:64015868-64015887 None:intergenic 55.0%
TTGCCCCGTTAGGAAACACG+TGG + chr5_1:64015869-64015888 Msa0743590:CDS 55.0%
! TGGAGCTGATTCCCATCCCA+AGG - chr5_1:64016058-64016077 None:intergenic 55.0%
TGGGATGGGAATCAGCTCCA+CGG + chr5_1:64016058-64016077 Msa0743590:CDS 55.0%
GTGAGCAAGGATACGCGGAA+TGG - chr5_1:64016277-64016296 None:intergenic 55.0%
CTCGAGATCGGAAGCTTCGC+CGG - chr5_1:64012493-64012512 None:intergenic 60.0%
ATGCACGGCGACCTCGAGAT+CGG - chr5_1:64012505-64012524 None:intergenic 60.0%
! CCGGCGGGTATTGTGATGCA+CGG - chr5_1:64012520-64012539 None:intergenic 60.0%
CCGTGCATCACAATACCCGC+CGG + chr5_1:64012517-64012536 Msa0743590:CDS 60.0%
CGTGCATCACAATACCCGCC+GGG + chr5_1:64012518-64012537 Msa0743590:CDS 60.0%
AGGGACCCTGTAGTCGGTGA+AGG - chr5_1:64014211-64014230 None:intergenic 60.0%
ACAACCCGTGGCTCTCGGAT+AGG - chr5_1:64015345-64015364 None:intergenic 60.0%
! TATCCGAGAGCCACGGGTTG+TGG + chr5_1:64015344-64015363 Msa0743590:CDS 60.0%
GTACCACAACCCGTGGCTCT+CGG - chr5_1:64015350-64015369 None:intergenic 60.0%
! CAAATGCCGGTTGCCCCGTT+AGG + chr5_1:64015859-64015878 Msa0743590:CDS 60.0%
TGGCTACTACTCCTTGCGGC+AGG - chr5_1:64015960-64015979 None:intergenic 60.0%
ATGGGAATCAGCTCCACGGC+TGG + chr5_1:64016062-64016081 Msa0743590:CDS 60.0%
ACCACCACCAACTCCGGCGA+AGG + chr5_1:64012400-64012419 Msa0743590:CDS 65.0%
CCACCACCAACTCCGGCGAA+GGG + chr5_1:64012401-64012420 Msa0743590:CDS 65.0%
TGTCCCTTCGCCGGAGTTGG+TGG - chr5_1:64012407-64012426 None:intergenic 65.0%
CGGCGAAGCTTCCGATCTCG+AGG + chr5_1:64012491-64012510 Msa0743590:CDS 65.0%
GACGTCGGACTATACCCGGC+GGG - chr5_1:64012535-64012554 None:intergenic 65.0%
CGACGTCGGACTATACCCGG+CGG - chr5_1:64012536-64012555 None:intergenic 65.0%
!! ATCGACGGGAGCGCTAGTGC+TGG - chr5_1:64014647-64014666 None:intergenic 65.0%
!! CCCTTCGCCGGAGTTGGTGG+TGG - chr5_1:64012404-64012423 None:intergenic 70.0%
GGGTGTCCCTTCGCCGGAGT+TGG - chr5_1:64012410-64012429 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 64012207 64016582 64012207 ID=Msa0743590;Name=Msa0743590
chr5_1 mRNA 64012207 64016582 64012207 ID=Msa0743590-mRNA-1;Parent=Msa0743590;Name=Msa0743590-mRNA-1;_AED=0.14;_eAED=0.14;_QI=184|1|1|1|0.83|0.71|7|232|548
chr5_1 exon 64012207 64012591 64012207 ID=Msa0743590-mRNA-1:exon:18924;Parent=Msa0743590-mRNA-1
chr5_1 exon 64014202 64014366 64014202 ID=Msa0743590-mRNA-1:exon:18925;Parent=Msa0743590-mRNA-1
chr5_1 exon 64014484 64014991 64014484 ID=Msa0743590-mRNA-1:exon:18926;Parent=Msa0743590-mRNA-1
chr5_1 exon 64015091 64015217 64015091 ID=Msa0743590-mRNA-1:exon:18927;Parent=Msa0743590-mRNA-1
chr5_1 exon 64015299 64015457 64015299 ID=Msa0743590-mRNA-1:exon:18928;Parent=Msa0743590-mRNA-1
chr5_1 exon 64015842 64016334 64015842 ID=Msa0743590-mRNA-1:exon:18929;Parent=Msa0743590-mRNA-1
chr5_1 exon 64016357 64016582 64016357 ID=Msa0743590-mRNA-1:exon:18930;Parent=Msa0743590-mRNA-1
chr5_1 five_prime_UTR 64012207 64012390 64012207 ID=Msa0743590-mRNA-1:five_prime_utr;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64012391 64012591 64012391 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64014202 64014366 64014202 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64014484 64014991 64014484 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64015091 64015217 64015091 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64015299 64015457 64015299 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 CDS 64015842 64016328 64015842 ID=Msa0743590-mRNA-1:cds;Parent=Msa0743590-mRNA-1
chr5_1 three_prime_UTR 64016329 64016334 64016329 ID=Msa0743590-mRNA-1:three_prime_utr;Parent=Msa0743590-mRNA-1
chr5_1 three_prime_UTR 64016357 64016582 64016357 ID=Msa0743590-mRNA-1:three_prime_utr;Parent=Msa0743590-mRNA-1
Gene Sequence

>Msa0743590

ATGGAAGCAACCACCACCAACTCCGGCGAAGGGACACCCATTGATCCGAATCGAACTGGGTCGGGTCAAAATTCAATGGCAAGATACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACAATACCCGCCGGGTATAGTCCGACGTCGTTGTTGGAGTCTCCGGTTCTTCTTTCAAACATGAAGGTTGAGCCTTCACCGACTACAGGGTCCCTTCTTCAAGCTTTAAACTGTTCTATGGCTTCTGCTGGTTCTGCTACATTTCCTGTAACTTCTGCATGCTTCAATACCAGCACTGTTAATGGCAGAAAATCAAGTTTCTTTGAGTTTAAACCACAAGATAGAAATATGGTTCCTGCAGACTTCAACAGCCATGTTAGCGAAAAATCTACTCAAGTGGAAGGTTCAGGAAACGGTCCATCATTTCGATCTTCTCCATTAAATGAAAAGGAGATAGCAGATCAATCTAATGAATTAAGCCTATCATCATCACCTGTTCAAATGGTTAGTTCCAGCACTAGCGCTCCCGTCGATGTCAATTCGGATGAACCTAACCACAAAGGCAACACTGCTAATGGGCCTCAATCATCAAATGATGGATACAATTGGCGAAAGTATGGGCAAAAACATGTTAAAGGGAGTGAGTTTCCGCGCAGCTATTACAAATGTACGCATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATATATAAGGGAACACATGATCATCCTAAACCTCAACCAAACAACCGATACTCTGCTGGTTCTGTTATGTCTACACAAGGAGAGAGATCCGATAACAGGGCATCTTCTTTGGCTGGCCGAGATGACAAAGCATCCAATAGTCCAGAGCAATCAGTTGTGGCAACAAATGATCTTAGTCCAGATGGTGCTGGATTTGTGTCGACCAGGACAAACGATGGGTTTGATGAAGATGATCCCTTCTCAAAGCCAAGAAAAATGGAACTCGGAAATGCTGACATCATTCCTGTAGTTAAGCCTATCCGAGAGCCACGGGTTGTGGTACAGACTATGAGCGAAGTTGATATATTGGATGATGGATACCGCTGGCGTAAATATGGGCAGAAGGTTGTGAGGGGAAATCCTAACCCAAGGAGTTATTACAAATGTACAAATGCCGGTTGCCCCGTTAGGAAACACGTGGAAAGAGCATCACATGATCCGAAAGCTGTAATTACAACATATGAAGGCAAACACAATCATGATGTACCTGCCGCAAGGAGTAGTAGCCATGACATGGCAGGACATGCAACTTCATTTCGACAGACAAGAATAAAATTGGAAGAAAATGATACTATTAGTCTTGACCTTGGGATGGGAATCAGCTCCACGGCTGGAAATAGATCGAATGGGCAAGGGAAAATGCTGCTATCCGAATTTAGGAATAGCAATCAAACTCACACAAGCAATTCCAGTTTCAAGTTTGTTCATAATACTACCTCAGCTCCGGTATACTACAGTGTTCTAAATAACGGTTCAAATCCGTTTGGTTCTAGAGAAAATAGAAATGATGGTTCGTCTTTAAACCATTCCGCGTATCCTTGCTCACAAACCATGGGAAGAATACTAATGGGGCCATGA
Protein sequence

>Msa0743590

MEATTTNSGEGTPIDPNRTGSGQNSMARYKLMSPAKLPISRSPCITIPAGYSPTSLLESPVLLSNMKVEPSPTTGSLLQALNCSMASAGSATFPVTSACFNTSTVNGRKSSFFEFKPQDRNMVPADFNSHVSEKSTQVEGSGNGPSFRSSPLNEKEIADQSNELSLSSSPVQMVSSSTSAPVDVNSDEPNHKGNTANGPQSSNDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNNRYSAGSVMSTQGERSDNRASSLAGRDDKASNSPEQSVVATNDLSPDGAGFVSTRTNDGFDEDDPFSKPRKMELGNADIIPVVKPIREPRVVVQTMSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGHATSFRQTRIKLEENDTISLDLGMGISSTAGNRSNGQGKMLLSEFRNSNQTHTSNSSFKFVHNTTSAPVYYSVLNNGSNPFGSRENRNDGSSLNHSAYPCSQTMGRILMGP*