Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744200 | XP_039689000.1 | 83.982 | 437 | 26 | 1 | 12 | 404 | 74 | 510 | 0.0 | 749 |
| Msa0744200 | XP_039689000.1 | 93.836 | 146 | 9 | 0 | 403 | 548 | 620 | 765 | 5.62e-83 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744200 | sp|Q9SZL8|FRS5_ARATH | 33.803 | 426 | 236 | 4 | 22 | 404 | 70 | 492 | 1.13e-75 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744200 | A2Q1A1 | 50.000 | 154 | 69 | 2 | 403 | 548 | 625 | 778 | 9.36e-35 | 150 |
| Msa0744200 | A2Q1A1 | 59.817 | 438 | 128 | 3 | 14 | 404 | 81 | 517 | 1.39e-178 | 533 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0744200 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744200 | MtrunA17_Chr2g0296781 | 40.952 | 315 | 183 | 3 | 93 | 406 | 98 | 410 | 1.13e-76 | 256 |
| Msa0744200 | MtrunA17_Chr1g0202341 | 34.579 | 428 | 237 | 5 | 17 | 404 | 43 | 467 | 1.95e-74 | 249 |
| Msa0744200 | MtrunA17_Chr5g0448761 | 33.645 | 428 | 234 | 5 | 22 | 402 | 57 | 481 | 7.51e-73 | 247 |
| Msa0744200 | MtrunA17_Chr6g0477261 | 41.333 | 300 | 173 | 3 | 108 | 406 | 2 | 299 | 1.55e-72 | 244 |
| Msa0744200 | MtrunA17_Chr8g0363841 | 33.493 | 418 | 234 | 8 | 14 | 390 | 5 | 419 | 9.37e-71 | 239 |
| Msa0744200 | MtrunA17_Chr5g0441581 | 32.783 | 424 | 247 | 8 | 16 | 406 | 20 | 438 | 1.26e-70 | 239 |
| Msa0744200 | MtrunA17_Chr1g0207551 | 31.787 | 431 | 241 | 8 | 20 | 406 | 29 | 450 | 1.15e-64 | 225 |
| Msa0744200 | MtrunA17_Chr2g0324011 | 30.211 | 427 | 259 | 4 | 16 | 404 | 1 | 426 | 8.37e-64 | 219 |
| Msa0744200 | MtrunA17_Chr1g0203051 | 35.093 | 322 | 199 | 4 | 86 | 404 | 177 | 491 | 1.87e-63 | 219 |
| Msa0744200 | MtrunA17_Chr3g0080351 | 31.220 | 410 | 245 | 9 | 20 | 397 | 71 | 475 | 2.15e-63 | 222 |
| Msa0744200 | MtrunA17_Chr2g0287651 | 31.220 | 410 | 227 | 5 | 31 | 395 | 81 | 480 | 9.80e-63 | 221 |
| Msa0744200 | MtrunA17_Chr2g0287061 | 33.846 | 390 | 244 | 8 | 23 | 407 | 181 | 561 | 3.18e-61 | 216 |
| Msa0744200 | MtrunA17_Chr1g0196541 | 36.207 | 290 | 178 | 4 | 116 | 402 | 121 | 406 | 3.62e-59 | 209 |
| Msa0744200 | MtrunA17_Chr3g0118611 | 36.471 | 255 | 153 | 2 | 153 | 407 | 113 | 358 | 2.52e-57 | 204 |
| Msa0744200 | MtrunA17_Chr5g0448511 | 38.430 | 242 | 148 | 1 | 161 | 402 | 13 | 253 | 1.27e-56 | 198 |
| Msa0744200 | MtrunA17_Chr2g0329031 | 31.897 | 348 | 215 | 6 | 72 | 406 | 85 | 423 | 6.86e-56 | 200 |
| Msa0744200 | MtrunA17_Chr6g0458391 | 30.729 | 384 | 227 | 6 | 25 | 378 | 225 | 599 | 8.35e-55 | 197 |
| Msa0744200 | MtrunA17_Chr3g0082121 | 30.549 | 419 | 243 | 8 | 25 | 404 | 43 | 452 | 9.92e-54 | 193 |
| Msa0744200 | MtrunA17_Chr2g0291581 | 29.455 | 404 | 259 | 6 | 25 | 404 | 71 | 472 | 1.63e-53 | 192 |
| Msa0744200 | MtrunA17_Chr5g0440451 | 37.255 | 255 | 151 | 2 | 153 | 407 | 216 | 461 | 7.16e-53 | 193 |
| Msa0744200 | MtrunA17_Chr1g0198761 | 30.390 | 385 | 250 | 7 | 26 | 406 | 106 | 476 | 1.23e-49 | 182 |
| Msa0744200 | MtrunA17_Chr1g0164591 | 33.096 | 281 | 180 | 3 | 98 | 378 | 35 | 307 | 5.93e-49 | 172 |
| Msa0744200 | MtrunA17_Chr2g0291591 | 27.525 | 396 | 246 | 7 | 20 | 378 | 59 | 450 | 3.87e-48 | 176 |
| Msa0744200 | MtrunA17_Chr5g0431001 | 28.733 | 442 | 259 | 9 | 11 | 399 | 45 | 483 | 5.34e-48 | 174 |
| Msa0744200 | MtrunA17_Chr1g0203721 | 25.339 | 442 | 282 | 9 | 27 | 425 | 65 | 501 | 1.93e-44 | 168 |
| Msa0744200 | MtrunA17_Chr2g0294841 | 26.386 | 451 | 271 | 12 | 23 | 422 | 43 | 483 | 3.53e-40 | 155 |
| Msa0744200 | MtrunA17_Chr2g0276841 | 25.000 | 432 | 267 | 8 | 25 | 406 | 70 | 494 | 3.99e-38 | 149 |
| Msa0744200 | MtrunA17_Chr7g0258861 | 31.802 | 283 | 150 | 6 | 24 | 264 | 9 | 290 | 1.07e-34 | 133 |
| Msa0744200 | MtrunA17_Chr2g0290391 | 23.810 | 483 | 304 | 11 | 21 | 449 | 47 | 519 | 7.47e-34 | 136 |
| Msa0744200 | MtrunA17_Chr1g0149131 | 30.909 | 110 | 76 | 0 | 265 | 374 | 1 | 110 | 1.34e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744200 | AT4G38180.1 | 33.803 | 426 | 236 | 4 | 22 | 404 | 70 | 492 | 1.15e-76 | 258 |
| Msa0744200 | AT4G15090.1 | 32.715 | 431 | 236 | 9 | 20 | 404 | 46 | 468 | 1.69e-65 | 228 |
| Msa0744200 | AT4G15090.5 | 32.715 | 431 | 236 | 9 | 20 | 404 | 46 | 468 | 1.69e-65 | 228 |
| Msa0744200 | AT4G15090.3 | 32.715 | 431 | 236 | 9 | 20 | 404 | 46 | 468 | 1.69e-65 | 228 |
| Msa0744200 | AT4G15090.2 | 32.715 | 431 | 236 | 9 | 20 | 404 | 46 | 468 | 1.69e-65 | 228 |
| Msa0744200 | AT4G15090.4 | 32.715 | 431 | 236 | 9 | 20 | 404 | 46 | 468 | 1.69e-65 | 228 |
| Msa0744200 | AT3G22170.2 | 29.257 | 417 | 257 | 7 | 23 | 406 | 68 | 479 | 3.91e-59 | 211 |
| Msa0744200 | AT3G22170.1 | 29.257 | 417 | 257 | 7 | 23 | 406 | 68 | 479 | 3.91e-59 | 211 |
| Msa0744200 | AT2G27110.2 | 30.303 | 396 | 251 | 7 | 24 | 402 | 48 | 435 | 2.51e-57 | 206 |
| Msa0744200 | AT2G27110.1 | 30.303 | 396 | 251 | 7 | 24 | 402 | 48 | 435 | 2.51e-57 | 206 |
| Msa0744200 | AT2G27110.3 | 37.037 | 243 | 150 | 1 | 160 | 402 | 51 | 290 | 3.42e-57 | 203 |
| Msa0744200 | AT3G06250.2 | 32.242 | 397 | 234 | 11 | 24 | 406 | 189 | 564 | 3.76e-55 | 199 |
| Msa0744200 | AT3G06250.1 | 32.242 | 397 | 234 | 11 | 24 | 406 | 189 | 564 | 3.76e-55 | 199 |
| Msa0744200 | AT3G06250.3 | 32.242 | 397 | 234 | 11 | 24 | 406 | 189 | 564 | 3.76e-55 | 199 |
| Msa0744200 | AT1G52520.1 | 28.922 | 408 | 258 | 10 | 25 | 404 | 85 | 488 | 1.03e-50 | 185 |
| Msa0744200 | AT5G18960.2 | 29.504 | 383 | 214 | 9 | 24 | 378 | 210 | 564 | 1.74e-48 | 180 |
| Msa0744200 | AT5G18960.1 | 29.504 | 383 | 214 | 9 | 24 | 378 | 210 | 564 | 1.74e-48 | 180 |
| Msa0744200 | AT2G32250.5 | 36.364 | 231 | 146 | 1 | 167 | 397 | 176 | 405 | 2.19e-48 | 179 |
| Msa0744200 | AT2G32250.7 | 35.294 | 238 | 153 | 1 | 167 | 404 | 135 | 371 | 3.21e-48 | 179 |
| Msa0744200 | AT1G80010.1 | 35.124 | 242 | 156 | 1 | 163 | 404 | 274 | 514 | 3.22e-48 | 179 |
| Msa0744200 | AT2G32250.8 | 35.294 | 238 | 153 | 1 | 167 | 404 | 135 | 371 | 3.51e-48 | 179 |
| Msa0744200 | AT2G32250.2 | 35.294 | 238 | 153 | 1 | 167 | 404 | 176 | 412 | 3.62e-48 | 179 |
| Msa0744200 | AT2G32250.4 | 35.294 | 238 | 153 | 1 | 167 | 404 | 176 | 412 | 3.62e-48 | 179 |
| Msa0744200 | AT2G32250.6 | 35.294 | 238 | 153 | 1 | 167 | 404 | 176 | 412 | 4.12e-48 | 179 |
| Msa0744200 | AT2G32250.1 | 35.294 | 238 | 153 | 1 | 167 | 404 | 176 | 412 | 4.12e-48 | 179 |
| Msa0744200 | AT2G32250.3 | 35.294 | 238 | 153 | 1 | 167 | 404 | 176 | 412 | 4.12e-48 | 179 |
| Msa0744200 | AT4G38170.1 | 38.017 | 242 | 143 | 4 | 162 | 402 | 20 | 255 | 4.40e-48 | 176 |
| Msa0744200 | AT1G76320.3 | 34.286 | 245 | 160 | 1 | 160 | 404 | 162 | 405 | 2.14e-47 | 176 |
| Msa0744200 | AT4G19990.5 | 32.398 | 392 | 223 | 10 | 28 | 390 | 24 | 402 | 4.18e-47 | 176 |
| Msa0744200 | AT4G19990.3 | 32.398 | 392 | 223 | 10 | 28 | 390 | 24 | 402 | 4.68e-47 | 176 |
| Msa0744200 | AT4G19990.4 | 32.398 | 392 | 223 | 10 | 28 | 390 | 24 | 402 | 4.68e-47 | 176 |
| Msa0744200 | AT4G19990.7 | 32.398 | 392 | 223 | 10 | 28 | 390 | 38 | 416 | 5.30e-47 | 176 |
| Msa0744200 | AT1G76320.2 | 34.286 | 245 | 160 | 1 | 160 | 404 | 162 | 405 | 5.55e-47 | 175 |
| Msa0744200 | AT1G76320.1 | 34.286 | 245 | 160 | 1 | 160 | 404 | 162 | 405 | 5.93e-47 | 175 |
| Msa0744200 | AT1G76320.4 | 34.286 | 245 | 160 | 1 | 160 | 404 | 162 | 405 | 5.93e-47 | 175 |
| Msa0744200 | AT4G19990.6 | 32.398 | 392 | 223 | 10 | 28 | 390 | 24 | 402 | 7.94e-47 | 175 |
| Msa0744200 | AT4G19990.2 | 32.398 | 392 | 223 | 10 | 28 | 390 | 24 | 402 | 7.94e-47 | 175 |
| Msa0744200 | AT4G19990.1 | 38.298 | 235 | 143 | 2 | 157 | 390 | 112 | 345 | 2.32e-45 | 170 |
| Msa0744200 | AT5G28530.3 | 26.639 | 488 | 286 | 15 | 20 | 449 | 50 | 523 | 7.44e-37 | 145 |
| Msa0744200 | AT5G28530.2 | 26.639 | 488 | 286 | 15 | 20 | 449 | 50 | 523 | 7.44e-37 | 145 |
| Msa0744200 | AT5G28530.1 | 26.531 | 490 | 288 | 15 | 20 | 449 | 50 | 527 | 1.18e-36 | 145 |
| Msa0744200 | AT1G10240.2 | 25.747 | 435 | 260 | 11 | 25 | 406 | 48 | 472 | 5.07e-36 | 143 |
| Msa0744200 | AT1G10240.1 | 25.747 | 435 | 260 | 11 | 25 | 406 | 48 | 472 | 5.07e-36 | 143 |
| Msa0744200 | AT5G28530.5 | 27.189 | 217 | 142 | 7 | 237 | 449 | 256 | 460 | 2.24e-15 | 79.7 |
| Msa0744200 | AT5G28530.4 | 26.941 | 219 | 144 | 7 | 237 | 449 | 256 | 464 | 3.44e-15 | 79.0 |
Find 89 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTAGTCTTTGCAAATTT+TGG | 0.090976 | 5_1:+64906959 | None:intergenic |
| AAATTGCTTCTTGTGTTAAA+TGG | 0.133780 | 5_1:-64907094 | Msa0744200:CDS |
| CATACCAATCCCCATAAATT+TGG | 0.150219 | 5_1:+64913233 | None:intergenic |
| GGGAACCTCTCCCAAATTTA+TGG | 0.209422 | 5_1:-64913244 | Msa0744200:CDS |
| TCCTTACCATCCTTCTTATT+TGG | 0.212526 | 5_1:+64908750 | None:intergenic |
| TTCTACTTCGTCAGGAATAT+TGG | 0.232123 | 5_1:+64906991 | None:intergenic |
| TTTAATTCATCATCACAATT+TGG | 0.253101 | 5_1:+64908936 | None:intergenic |
| TTGAGTTAGAAAAGAATAAA+TGG | 0.272170 | 5_1:-64907813 | Msa0744200:CDS |
| AGGACAGATGATTTGATTCT+TGG | 0.289591 | 5_1:-64907016 | Msa0744200:CDS |
| TACCTCATACGCATAATAAA+AGG | 0.300798 | 5_1:+64908323 | None:intergenic |
| TGAAACCACATCCCCAAATA+AGG | 0.310942 | 5_1:+64908239 | None:intergenic |
| CTATTCACAATGTGCTTACT+TGG | 0.311024 | 5_1:+64907250 | None:intergenic |
| AAGTTTCAAGTCATGTGTTT+GGG | 0.313111 | 5_1:-64907890 | Msa0744200:CDS |
| AATTGCTTCTTGTGTTAAAT+GGG | 0.315429 | 5_1:-64907093 | Msa0744200:CDS |
| AATTCAACCAAGTTAACATT+AGG | 0.328343 | 5_1:+64907661 | None:intergenic |
| AAAGTTTCAAGTCATGTGTT+TGG | 0.339166 | 5_1:-64907891 | Msa0744200:CDS |
| TCAAATACTTGTCCAATTGT+AGG | 0.344020 | 5_1:+64908912 | None:intergenic |
| GAAAGTGAGAATTCTTTCTA+TGG | 0.344600 | 5_1:-64907697 | Msa0744200:CDS |
| ATTCAAAGTCTTTAAATCTC+TGG | 0.356604 | 5_1:+64908407 | None:intergenic |
| GAATTCATCCTCATCATTCA+TGG | 0.363918 | 5_1:+64907918 | None:intergenic |
| CAAGTCTCTTCAAACTCATT+TGG | 0.379230 | 5_1:+64907856 | None:intergenic |
| TTTGGGCAGATGGTATTTGT+AGG | 0.408238 | 5_1:-64908272 | Msa0744200:CDS |
| GGAACCTCTCCCAAATTTAT+GGG | 0.412607 | 5_1:-64913243 | Msa0744200:CDS |
| ATACCAATCCCCATAAATTT+GGG | 0.418186 | 5_1:+64913234 | None:intergenic |
| AAAGTGTCTTTGAAATATGC+TGG | 0.421516 | 5_1:+64907754 | None:intergenic |
| AAACAATTGGATGGATTTGA+AGG | 0.422078 | 5_1:-64907055 | Msa0744200:CDS |
| GGAAGGATTTCTACTTCGTC+AGG | 0.426183 | 5_1:+64906983 | None:intergenic |
| TCTCCCAAATTTATGGGGAT+TGG | 0.428667 | 5_1:-64913237 | Msa0744200:intron |
| TTATTCCTTATTTGGGGATG+TGG | 0.431251 | 5_1:-64908244 | Msa0744200:CDS |
| GATGAATTAAAGCCTACAAT+TGG | 0.432711 | 5_1:-64908924 | Msa0744200:CDS |
| GGACAGATGATTTGATTCTT+GGG | 0.434817 | 5_1:-64907015 | Msa0744200:CDS |
| CAAATGAGTTTGAAGAGACT+TGG | 0.435988 | 5_1:-64907855 | Msa0744200:CDS |
| CAAGTAAGCACATTGTGAAT+AGG | 0.442114 | 5_1:-64907249 | Msa0744200:CDS |
| TTCAAAATGTTTCAGGCTGA+AGG | 0.454937 | 5_1:-64907328 | Msa0744200:intron |
| TCTGAATCCTAATGTTAACT+TGG | 0.461262 | 5_1:-64907668 | Msa0744200:intron |
| CTATGAAGAGACCGTTTCTC+AGG | 0.462729 | 5_1:-64908581 | Msa0744200:intron |
| CATAGCTGTGTGGAGAAGGC+TGG | 0.465632 | 5_1:-64907130 | Msa0744200:CDS |
| TGATCGGTTATTATAAGAGT+TGG | 0.470629 | 5_1:+64908045 | None:intergenic |
| CCAAAATTTGCAAAGACTAA+AGG | 0.474060 | 5_1:-64906959 | Msa0744200:CDS |
| GCATGTAGTAGAGCAAATAT+AGG | 0.483783 | 5_1:-64908516 | Msa0744200:CDS |
| GGGTTATTTGCCAAATAAGA+AGG | 0.490320 | 5_1:-64908760 | Msa0744200:CDS |
| GTTAAATGGGGTTGTTAACA+TGG | 0.491983 | 5_1:-64907080 | Msa0744200:CDS |
| GCCAAATAAGAAGGATGGTA+AGG | 0.493986 | 5_1:-64908751 | Msa0744200:CDS |
| AGGTAATAGATTGTCGATGA+TGG | 0.498326 | 5_1:+64908154 | None:intergenic |
| TTCCTTGCAGACCTGAGAAA+CGG | 0.505141 | 5_1:+64908570 | None:intergenic |
| GCGTATGAGGTAGGTGAAGA+AGG | 0.506620 | 5_1:-64908312 | Msa0744200:CDS |
| TGACATAGCTGACAATGTCT+TGG | 0.510088 | 5_1:-64907194 | Msa0744200:CDS |
| ACTTATTAAAAGAACAATGT+GGG | 0.512822 | 5_1:-64908476 | Msa0744200:CDS |
| TCTATAGCCACTTTCATGGA+AGG | 0.520478 | 5_1:+64908018 | None:intergenic |
| TCAAGATCCTTCCATGAAAG+TGG | 0.522014 | 5_1:-64908025 | Msa0744200:CDS |
| CTTACATAGCTGTGTGGAGA+AGG | 0.525967 | 5_1:-64907134 | Msa0744200:CDS |
| CATCGACAATCTATTACCTT+CGG | 0.531789 | 5_1:-64908150 | Msa0744200:CDS |
| AGAAAAGTGATTCATTCGTA+TGG | 0.536168 | 5_1:-64908107 | Msa0744200:CDS |
| TGTTTGAGATTCGAAGCACT+TGG | 0.538324 | 5_1:-64907780 | Msa0744200:CDS |
| GTTAGAAAAGAATAAATGGT+TGG | 0.538518 | 5_1:-64907809 | Msa0744200:CDS |
| GGTAGTGGTAAAAGAATCAA+AGG | 0.539060 | 5_1:-64906938 | Msa0744200:CDS |
| AAGAATCAAATCATCTGTCC+TGG | 0.550254 | 5_1:+64907018 | None:intergenic |
| TTTCATGGAAGGATCTTGAT+CGG | 0.556444 | 5_1:+64908029 | None:intergenic |
| TCTCCACACAGCTATGTAAG+TGG | 0.567374 | 5_1:+64907137 | None:intergenic |
| AAGTGTCTTTGAAATATGCT+GGG | 0.568081 | 5_1:+64907755 | None:intergenic |
| AAATGAGTTTGAAGAGACTT+GGG | 0.572608 | 5_1:-64907854 | Msa0744200:CDS |
| TTTGCAAAGACTAAAGGTAG+TGG | 0.573810 | 5_1:-64906953 | Msa0744200:CDS |
| AACAATTGGATGGATTTGAA+GGG | 0.574388 | 5_1:-64907054 | Msa0744200:CDS |
| AATCCCCATAAATTTGGGAG+AGG | 0.575312 | 5_1:+64913239 | None:intergenic |
| CTACTCATAGATTGTGCATG+TGG | 0.578093 | 5_1:-64907978 | Msa0744200:CDS |
| ACAAACTCATTTCTGATGTG+TGG | 0.578358 | 5_1:-64907162 | Msa0744200:CDS |
| ACACAAAGTATGTGTCTACA+AGG | 0.578783 | 5_1:+64907301 | None:intergenic |
| GGAGAAGGCTGGAAAAGATA+AGG | 0.578848 | 5_1:-64907119 | Msa0744200:CDS |
| TGATGGTTTATCCCGGTGAA+AGG | 0.578866 | 5_1:+64908171 | None:intergenic |
| CTTATTAAAAGAACAATGTG+GGG | 0.585685 | 5_1:-64908475 | Msa0744200:CDS |
| GACCGTTTCTCAGGTCTGCA+AGG | 0.589066 | 5_1:-64908572 | Msa0744200:CDS |
| AATCAAAGGTGGAAAAGAGA+AGG | 0.592127 | 5_1:-64906924 | Msa0744200:CDS |
| TATTTGCCAAATAAGAAGGA+TGG | 0.592394 | 5_1:-64908756 | Msa0744200:CDS |
| CACTTATTAAAAGAACAATG+TGG | 0.593122 | 5_1:-64908477 | Msa0744200:CDS |
| TTGTCGATGATGGTTTATCC+CGG | 0.594835 | 5_1:+64908164 | None:intergenic |
| AAGGGAGTTCTAAGAGAACC+AGG | 0.594888 | 5_1:-64907036 | Msa0744200:CDS |
| GCAAAGTGAATCTACTGTCA+AGG | 0.595204 | 5_1:-64908727 | Msa0744200:intron |
| TGTTATAAGTCCTACGCCGA+AGG | 0.599087 | 5_1:+64908134 | None:intergenic |
| CAATCTATTACCTTCGGCGT+AGG | 0.610128 | 5_1:-64908144 | Msa0744200:CDS |
| GTATTTGATACGTTAGCAGA+AGG | 0.613843 | 5_1:-64908897 | Msa0744200:CDS |
| AGTGGTAAAAGAATCAAAGG+TGG | 0.614504 | 5_1:-64906935 | Msa0744200:CDS |
| TCATACGCATAATAAAAGGA+TGG | 0.619753 | 5_1:+64908327 | None:intergenic |
| GTAAGCACATTGTGAATAGG+TGG | 0.621765 | 5_1:-64907246 | Msa0744200:CDS |
| GAACCTCTCCCAAATTTATG+GGG | 0.627969 | 5_1:-64913242 | Msa0744200:CDS |
| AGTTTCAAGTCATGTGTTTG+GGG | 0.653537 | 5_1:-64907889 | Msa0744200:CDS |
| ATTGCTTCTTGTGTTAAATG+GGG | 0.659997 | 5_1:-64907092 | Msa0744200:CDS |
| TTATTAAAAGAACAATGTGG+GGG | 0.667843 | 5_1:-64908474 | Msa0744200:CDS |
| AGGTGTTTCCATGAATGATG+AGG | 0.705279 | 5_1:-64907926 | Msa0744200:CDS |
| GAACCACTTACATAGCTGTG+TGG | 0.775450 | 5_1:-64907140 | Msa0744200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | - | chr5_1:64909682-64909701 | Msa0744200:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr5_1:64909996-64910015 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr5_1:64909682-64909701 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr5_1:64909682-64909701 | Msa0744200:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr5_1:64909996-64910015 | Msa0744200:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr5_1:64909682-64909701 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr5_1:64909996-64910015 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr5_1:64909996-64910015 | Msa0744200:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr5_1:64909682-64909701 | Msa0744200:intron | 0.0% |
| !!! | AATTTAATTATTCTTTTTGA+AGG | + | chr5_1:64907241-64907260 | None:intergenic | 10.0% |
| !! | ATTCAAAACAATTATTAATT+AGG | + | chr5_1:64907312-64907331 | None:intergenic | 10.0% |
| !! | TCATTATTATTCATTTATTT+CGG | - | chr5_1:64908319-64908338 | Msa0744200:CDS | 10.0% |
| !!! | ATTTGGTTTTTTTTTTTTTT+TGG | - | chr5_1:64908433-64908452 | Msa0744200:CDS | 10.0% |
| !! | GACAAAATATAATAAAAAAA+TGG | + | chr5_1:64908591-64908610 | None:intergenic | 10.0% |
| !! | ATATATATATATATATAGTC+AGG | + | chr5_1:64909679-64909698 | None:intergenic | 10.0% |
| !!! | ATAATTCTAAAATCTCATTT+TGG | - | chr5_1:64907405-64907424 | Msa0744200:intron | 15.0% |
| !!! | AATTTGAATAACTGATTTTT+CGG | - | chr5_1:64907557-64907576 | Msa0744200:intron | 15.0% |
| !!! | TAAAAACGTATTTTGATTAA+GGG | + | chr5_1:64907933-64907952 | None:intergenic | 15.0% |
| !!! | ATAAAAACGTATTTTGATTA+AGG | + | chr5_1:64907934-64907953 | None:intergenic | 15.0% |
| !! | AAAAATTGTTAAAAGTTGTT+GGG | - | chr5_1:64907992-64908011 | Msa0744200:CDS | 15.0% |
| !! | AAAAAAAAACCAAATTCTAA+AGG | + | chr5_1:64908428-64908447 | None:intergenic | 15.0% |
| !! | AAAAATTGAAATCAAAGAAA+GGG | + | chr5_1:64908541-64908560 | None:intergenic | 15.0% |
| !! | AAAAAATTGAAATCAAAGAA+AGG | + | chr5_1:64908542-64908561 | None:intergenic | 15.0% |
| !!! | GAATTAATTATTGCTTTTAT+TGG | - | chr5_1:64909091-64909110 | Msa0744200:intron | 15.0% |
| !! | TTAACTTAATTATATTTCAG+TGG | + | chr5_1:64909282-64909301 | None:intergenic | 15.0% |
| !!! | TAATATTGAAATGTAGATTT+TGG | - | chr5_1:64909339-64909358 | Msa0744200:intron | 15.0% |
| !! | TTACAAATGAAAATTAACAA+CGG | + | chr5_1:64909438-64909457 | None:intergenic | 15.0% |
| !!! | TTAATTTTCATTTGTAATAG+AGG | - | chr5_1:64909441-64909460 | Msa0744200:intron | 15.0% |
| !!! | TAATTTTCATTTGTAATAGA+GGG | - | chr5_1:64909442-64909461 | Msa0744200:intron | 15.0% |
| !! | GGAAAACATAATAAATAAAA+AGG | + | chr5_1:64911121-64911140 | None:intergenic | 15.0% |
| !! | TCTTCAATAAAATAATAGAA+AGG | + | chr5_1:64911142-64911161 | None:intergenic | 15.0% |
| !! | ATATATTTCAACATGAATTA+TGG | - | chr5_1:64912642-64912661 | Msa0744200:intron | 15.0% |
| !!! | GAAGTTAATTATTTTCCAAA+AGG | + | chr5_1:64907368-64907387 | None:intergenic | 20.0% |
| !! | TTAAAAAGCAAGTAAAAGAA+TGG | - | chr5_1:64907730-64907749 | Msa0744200:CDS | 20.0% |
| !! | GAAAAATTGTTAAAAGTTGT+TGG | - | chr5_1:64907991-64908010 | Msa0744200:CDS | 20.0% |
| !! | CATTCATTAAATGATGTATA+TGG | + | chr5_1:64908089-64908108 | None:intergenic | 20.0% |
| !!! | ACTTATGTTTTTTAATCTCA+TGG | + | chr5_1:64908201-64908220 | None:intergenic | 20.0% |
| !!! | AATTATGAATTTTTCAATGG+AGG | + | chr5_1:64908373-64908392 | None:intergenic | 20.0% |
| !!! | GGAAATTATGAATTTTTCAA+TGG | + | chr5_1:64908376-64908395 | None:intergenic | 20.0% |
| !!! | ACGATTCAGAATTATATTTT+AGG | - | chr5_1:64908745-64908764 | Msa0744200:CDS | 20.0% |
| !!! | ATTTTAGGAATGTTCAAAAA+AGG | - | chr5_1:64908760-64908779 | Msa0744200:CDS | 20.0% |
| !! | TTTAGATCAATACAAATGAA+TGG | + | chr5_1:64909606-64909625 | None:intergenic | 20.0% |
| !!! | ATTCATTTGTATTGATCTAA+AGG | - | chr5_1:64908987-64909006 | Msa0744200:intron | 20.0% |
| !!! | AATTTTTAATGAAAAACCTC+AGG | - | chr5_1:64909015-64909034 | Msa0744200:intron | 20.0% |
| !! | TTAATTATTACCTTCTTCTT+AGG | - | chr5_1:64909068-64909087 | Msa0744200:intron | 20.0% |
| !! | TAATTATTACCTTCTTCTTA+GGG | - | chr5_1:64909069-64909088 | Msa0744200:intron | 20.0% |
| !!! | AATTTTCATTTGTAATAGAG+GGG | - | chr5_1:64909443-64909462 | Msa0744200:intron | 20.0% |
| !!! | ATTCATTTGTATTGATCTAA+AGG | + | chr5_1:64908987-64909006 | None:intergenic | 20.0% |
| !! | TTTAGATCAATACAAATGAA+TGG | - | chr5_1:64909606-64909625 | Msa0744200:intron | 20.0% |
| !! | AAGTTAATAAATACACCTTA+AGG | - | chr5_1:64910113-64910132 | Msa0744200:intron | 20.0% |
| !! | AGCTAATTATAATATACCTA+AGG | + | chr5_1:64910741-64910760 | None:intergenic | 20.0% |
| !! | TAGGTATATTATAATTAGCT+TGG | - | chr5_1:64910741-64910760 | Msa0744200:intron | 20.0% |
| !!! | TTTTGTTCCTATTTTTTTGT+TGG | - | chr5_1:64910825-64910844 | Msa0744200:intron | 20.0% |
| !! | AATAGAACCAACAAAAAAAT+AGG | + | chr5_1:64910835-64910854 | None:intergenic | 20.0% |
| !! | CCAAACTAAGAAAAAAAAAT+AGG | + | chr5_1:64910955-64910974 | None:intergenic | 20.0% |
| !!! | CCTATTTTTTTTTCTTAGTT+TGG | - | chr5_1:64910952-64910971 | Msa0744200:intron | 20.0% |
| !! | TTTAATTCATCATCACAATT+TGG | + | chr5_1:64911201-64911220 | None:intergenic | 20.0% |
| !! | ACTTATTAAAAGAACAATGT+GGG | - | chr5_1:64911658-64911677 | Msa0744200:intron | 20.0% |
| !!! | TTTTGATAGATTACTTTAGA+AGG | - | chr5_1:64911769-64911788 | Msa0744200:intron | 20.0% |
| !! | AGGAAAAATTATTCCTTATT+TGG | - | chr5_1:64911882-64911901 | Msa0744200:intron | 20.0% |
| !!! | GGAAAAATTATTCCTTATTT+GGG | - | chr5_1:64911883-64911902 | Msa0744200:intron | 20.0% |
| !!! | GAAAAATTATTCCTTATTTG+GGG | - | chr5_1:64911884-64911903 | Msa0744200:intron | 20.0% |
| !!! | AAAAAAGTTTCTGAAAAAGT+AGG | - | chr5_1:64912188-64912207 | Msa0744200:intron | 20.0% |
| !! | TTGAGTTAGAAAAGAATAAA+TGG | - | chr5_1:64912321-64912340 | Msa0744200:intron | 20.0% |
| !!! | ATATTTCAAAGACACTTTTA+TGG | - | chr5_1:64912385-64912404 | Msa0744200:intron | 20.0% |
| !! | AAAATAAGAAAGATGAAGAT+GGG | - | chr5_1:64912690-64912709 | Msa0744200:intron | 20.0% |
| !! | TAAAGAATCCATCAATTTTC+AGG | + | chr5_1:64907758-64907777 | None:intergenic | 25.0% |
| ! | AATATGAAATAAAGGGAACT+TGG | - | chr5_1:64907875-64907894 | Msa0744200:CDS | 25.0% |
| !! | CAATTTTTCTGCACAATAAA+AGG | + | chr5_1:64907980-64907999 | None:intergenic | 25.0% |
| ! | TAATGACAAATGACTCATTT+AGG | + | chr5_1:64908239-64908258 | None:intergenic | 25.0% |
| !!! | CATTGATTTCCTTTAGAATT+TGG | - | chr5_1:64908416-64908435 | Msa0744200:CDS | 25.0% |
| ! | CATATAATATGTGGAGAATT+TGG | - | chr5_1:64908484-64908503 | Msa0744200:CDS | 25.0% |
| ! | ACAAAAGACAACAATTTAGA+AGG | + | chr5_1:64908566-64908585 | None:intergenic | 25.0% |
| ! | CCATGAGATTAAAAAAACAT+TGG | + | chr5_1:64908860-64908879 | None:intergenic | 25.0% |
| !!! | CCAATGTTTTTTTAATCTCA+TGG | - | chr5_1:64908857-64908876 | Msa0744200:CDS | 25.0% |
| ! | TAATTAATTCCCTAAGAAGA+AGG | + | chr5_1:64909081-64909100 | None:intergenic | 25.0% |
| !!! | TCATATCAAACCTTTTTTGT+TGG | - | chr5_1:64909192-64909211 | Msa0744200:intron | 25.0% |
| !! | AAAGATAACACTTCTTTTGA+TGG | - | chr5_1:64909231-64909250 | Msa0744200:intron | 25.0% |
| !! | TTTTGGTCAAAAACTTGAAA+TGG | - | chr5_1:64909356-64909375 | Msa0744200:intron | 25.0% |
| ! | GTCATTTCATATACTAATCA+GGG | + | chr5_1:64909390-64909409 | None:intergenic | 25.0% |
| !! | ATTTTCATTTGTAATAGAGG+GGG | - | chr5_1:64909444-64909463 | Msa0744200:intron | 25.0% |
| ! | TATATGGACTTCAAAAATTC+AGG | - | chr5_1:64909539-64909558 | Msa0744200:intron | 25.0% |
| ! | ACAAATGAATGGATATGATT+TGG | - | chr5_1:64909617-64909636 | Msa0744200:intron | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | - | chr5_1:64909749-64909768 | Msa0744200:intron | 25.0% |
| ! | TTCAAATTGATGTATTTGGT+TGG | + | chr5_1:64910642-64910661 | None:intergenic | 25.0% |
| ! | CCAATTCAAATTGATGTATT+TGG | + | chr5_1:64910646-64910665 | None:intergenic | 25.0% |
| ! | CCAAATACATCAATTTGAAT+TGG | - | chr5_1:64910643-64910662 | Msa0744200:intron | 25.0% |
| !!! | AACTTGTTTTCAAATTCCTT+AGG | - | chr5_1:64910722-64910741 | Msa0744200:intron | 25.0% |
| ! | ACAAAAAACAACTATCTCTT+AGG | + | chr5_1:64910811-64910830 | None:intergenic | 25.0% |
| !! | TCATCGACTATAGATAAAAA+CGG | - | chr5_1:64911315-64911334 | Msa0744200:intron | 25.0% |
| !!! | ATGCAAATGTTGTTTTCAAA+TGG | - | chr5_1:64911466-64911485 | Msa0744200:intron | 25.0% |
| !!! | TGCAAATGTTGTTTTCAAAT+GGG | - | chr5_1:64911467-64911486 | Msa0744200:intron | 25.0% |
| !! | CACATTGTTCTTTTAATAAG+TGG | + | chr5_1:64911659-64911678 | None:intergenic | 25.0% |
| ! | CACTTATTAAAAGAACAATG+TGG | - | chr5_1:64911657-64911676 | Msa0744200:intron | 25.0% |
| ! | CTTATTAAAAGAACAATGTG+GGG | - | chr5_1:64911659-64911678 | Msa0744200:intron | 25.0% |
| ! | TTATTAAAAGAACAATGTGG+GGG | - | chr5_1:64911660-64911679 | Msa0744200:intron | 25.0% |
| ! | ATTCAAAGTCTTTAAATCTC+TGG | + | chr5_1:64911730-64911749 | None:intergenic | 25.0% |
| !! | ATGGTTGTTTGAAAAGTTTT+TGG | - | chr5_1:64912046-64912065 | Msa0744200:intron | 25.0% |
| ! | GTTAGAAAAGAATAAATGGT+TGG | - | chr5_1:64912325-64912344 | Msa0744200:intron | 25.0% |
| ! | AATTCAACCAAGTTAACATT+AGG | + | chr5_1:64912476-64912495 | None:intergenic | 25.0% |
| ! | TTCTAAACCAAAACTATTGT+TGG | - | chr5_1:64912568-64912587 | Msa0744200:intron | 25.0% |
| ! | GAAAATAAGAAAGATGAAGA+TGG | - | chr5_1:64912689-64912708 | Msa0744200:intron | 25.0% |
| ! | TAAGATAATAGTGAGATCAA+TGG | - | chr5_1:64912731-64912750 | Msa0744200:intron | 25.0% |
| !!! | ACACATACTTTGTGTTTTAA+AGG | - | chr5_1:64912841-64912860 | Msa0744200:intron | 25.0% |
| !!! | CACATACTTTGTGTTTTAAA+GGG | - | chr5_1:64912842-64912861 | Msa0744200:intron | 25.0% |
| ! | AAATTGCTTCTTGTGTTAAA+TGG | - | chr5_1:64913040-64913059 | Msa0744200:intron | 25.0% |
| ! | AATTGCTTCTTGTGTTAAAT+GGG | - | chr5_1:64913041-64913060 | Msa0744200:intron | 25.0% |
| ! | TGTTAACATGGAAAAACAAT+TGG | - | chr5_1:64913066-64913085 | Msa0744200:intron | 25.0% |
| ATACCAATCCCCATAAATTT+GGG | + | chr5_1:64906903-64906922 | None:intergenic | 30.0% | |
| ! | GTTTCGAACTCTAGAAAATT+CGG | + | chr5_1:64907474-64907493 | None:intergenic | 30.0% |
| TGATACCTATCTTTCATCAA+AGG | + | chr5_1:64907508-64907527 | None:intergenic | 30.0% | |
| TTGATGAAAGATAGGTATCA+CGG | - | chr5_1:64907508-64907527 | Msa0744200:intron | 30.0% | |
| AACCGGCAATATGAAATAAA+GGG | - | chr5_1:64907868-64907887 | Msa0744200:CDS | 30.0% | |
| ! | TTCCCTTTATTTCATATTGC+CGG | + | chr5_1:64907873-64907892 | None:intergenic | 30.0% |
| !! | AATAAAAGGTTTTTCGGTTC+AGG | + | chr5_1:64907966-64907985 | None:intergenic | 30.0% |
| ! | CTGCACAATAAAAGGTTTTT+CGG | + | chr5_1:64907972-64907991 | None:intergenic | 30.0% |
| !! | CTAAAAGTGTTTGTTACGAT+GGG | + | chr5_1:64908027-64908046 | None:intergenic | 30.0% |
| GAAGAATAGATATCTCGAAA+TGG | + | chr5_1:64908397-64908416 | None:intergenic | 30.0% | |
| ATTGAAATCAAAGAAAGGGA+TGG | + | chr5_1:64908537-64908556 | None:intergenic | 30.0% | |
| TCATTCTCATAGTATATGTC+AGG | - | chr5_1:64908915-64908934 | Msa0744200:CDS | 30.0% | |
| ACAAATGAATGGACATGATT+TGG | + | chr5_1:64908977-64908996 | None:intergenic | 30.0% | |
| AAGGTAATAATTAATGCCCA+AGG | + | chr5_1:64909062-64909081 | None:intergenic | 30.0% | |
| CTTTAAGTGACCAACAAAAA+AGG | + | chr5_1:64909205-64909224 | None:intergenic | 30.0% | |
| CGTCATTTCATATACTAATC+AGG | + | chr5_1:64909391-64909410 | None:intergenic | 30.0% | |
| ! | TTTTCATTTGTAATAGAGGG+GGG | - | chr5_1:64909445-64909464 | Msa0744200:intron | 30.0% |
| ! | CTAATTCTTCTCTCTCATTT+TGG | + | chr5_1:64909501-64909520 | None:intergenic | 30.0% |
| TTATAGCAACATACACCTTA+GGG | + | chr5_1:64909784-64909803 | None:intergenic | 30.0% | |
| ACCTTCTAACAATAACAAGT+GGG | - | chr5_1:64909807-64909826 | Msa0744200:intron | 30.0% | |
| AAGTAGTTAATTACACCCTA+AGG | - | chr5_1:64909915-64909934 | Msa0744200:intron | 30.0% | |
| ACTCCCACATAAAAATTAGT+GGG | - | chr5_1:64909955-64909974 | Msa0744200:intron | 30.0% | |
| ! | ACACCCACTAATTTTTATGT+GGG | + | chr5_1:64909961-64909980 | None:intergenic | 30.0% |
| TTATAGCAACATACACCTTA+AGG | + | chr5_1:64909784-64909803 | None:intergenic | 30.0% | |
| ACCTTCTAACAAAAACAAGT+GGG | - | chr5_1:64910154-64910173 | Msa0744200:intron | 30.0% | |
| ! | ACTCCTTCTAAAAAGTAAGT+GGG | + | chr5_1:64910219-64910238 | None:intergenic | 30.0% |
| ! | TACTCCTTCTAAAAAGTAAG+TGG | + | chr5_1:64910220-64910239 | None:intergenic | 30.0% |
| GCAAGTGAATAACTAAAAAG+TGG | - | chr5_1:64910245-64910264 | Msa0744200:intron | 30.0% | |
| AAAGTGGTTAAATACACCTT+AGG | - | chr5_1:64910261-64910280 | Msa0744200:intron | 30.0% | |
| AAGTGGTTAAATACACCTTA+GGG | - | chr5_1:64910262-64910281 | Msa0744200:intron | 30.0% | |
| AAATTGATGTATTTGGTTGG+AGG | + | chr5_1:64910639-64910658 | None:intergenic | 30.0% | |
| ! | ATTATAATTAGCTTGGCTTG+AGG | - | chr5_1:64910748-64910767 | Msa0744200:intron | 30.0% |
| GATGAATTAAAGCCTACAAT+TGG | - | chr5_1:64911210-64911229 | Msa0744200:intron | 30.0% | |
| TCAAATACTTGTCCAATTGT+AGG | + | chr5_1:64911225-64911244 | None:intergenic | 30.0% | |
| !! | TATTTTGTTTGCTCGAAAGA+GGG | - | chr5_1:64911354-64911373 | Msa0744200:intron | 30.0% |
| TATTTGCCAAATAAGAAGGA+TGG | - | chr5_1:64911378-64911397 | Msa0744200:intron | 30.0% | |
| TGTCAAGGTTAAAAGAAGAA+GGG | - | chr5_1:64911422-64911441 | Msa0744200:intron | 30.0% | |
| !!! | AAATGTTGTTTTCAAATGGG+TGG | - | chr5_1:64911470-64911489 | Msa0744200:intron | 30.0% |
| !!! | AATGTTGTTTTCAAATGGGT+GGG | - | chr5_1:64911471-64911490 | Msa0744200:intron | 30.0% |
| TCATACGCATAATAAAAGGA+TGG | + | chr5_1:64911810-64911829 | None:intergenic | 30.0% | |
| ! | ATCCTTTTATTATGCGTATG+AGG | - | chr5_1:64911809-64911828 | Msa0744200:intron | 30.0% |
| TACCTCATACGCATAATAAA+AGG | + | chr5_1:64911814-64911833 | None:intergenic | 30.0% | |
| ! | TTTTATTATGCGTATGAGGT+AGG | - | chr5_1:64911813-64911832 | Msa0744200:intron | 30.0% |
| AGAAAAGTGATTCATTCGTA+TGG | - | chr5_1:64912027-64912046 | Msa0744200:intron | 30.0% | |
| !! | TGAAAAGTTTTTGGAAGCAA+TGG | - | chr5_1:64912055-64912074 | Msa0744200:intron | 30.0% |
| !! | GAAAAGTTTTTGGAAGCAAT+GGG | - | chr5_1:64912056-64912075 | Msa0744200:intron | 30.0% |
| TGATCGGTTATTATAAGAGT+TGG | + | chr5_1:64912092-64912111 | None:intergenic | 30.0% | |
| !! | ATTTTCTATAGCCACTTTCA+TGG | + | chr5_1:64912123-64912142 | None:intergenic | 30.0% |
| ! | AAAGTTTCAAGTCATGTGTT+TGG | - | chr5_1:64912243-64912262 | Msa0744200:intron | 30.0% |
| ! | AAGTTTCAAGTCATGTGTTT+GGG | - | chr5_1:64912244-64912263 | Msa0744200:intron | 30.0% |
| AAATGAGTTTGAAGAGACTT+GGG | - | chr5_1:64912280-64912299 | Msa0744200:intron | 30.0% | |
| !! | AAGTGTCTTTGAAATATGCT+GGG | + | chr5_1:64912382-64912401 | None:intergenic | 30.0% |
| !! | AAAGTGTCTTTGAAATATGC+TGG | + | chr5_1:64912383-64912402 | None:intergenic | 30.0% |
| GAAAGTGAGAATTCTTTCTA+TGG | - | chr5_1:64912437-64912456 | Msa0744200:intron | 30.0% | |
| TCTGAATCCTAATGTTAACT+TGG | - | chr5_1:64912466-64912485 | Msa0744200:intron | 30.0% | |
| TTGCTCATTCAAAATGTTTC+AGG | - | chr5_1:64912799-64912818 | Msa0744200:intron | 30.0% | |
| TTGTCAGCTATGTCAAAAAT+AGG | + | chr5_1:64912935-64912954 | None:intergenic | 30.0% | |
| ATTGCTTCTTGTGTTAAATG+GGG | - | chr5_1:64913042-64913061 | Msa0744200:intron | 30.0% | |
| AACATGGAAAAACAATTGGA+TGG | - | chr5_1:64913070-64913089 | Msa0744200:intron | 30.0% | |
| ! | AAACAATTGGATGGATTTGA+AGG | - | chr5_1:64913079-64913098 | Msa0744200:intron | 30.0% |
| ! | AACAATTGGATGGATTTGAA+GGG | - | chr5_1:64913080-64913099 | Msa0744200:intron | 30.0% |
| !! | TTAGTCTTTGCAAATTTTGG+TGG | + | chr5_1:64913175-64913194 | None:intergenic | 30.0% |
| !! | CCTTTAGTCTTTGCAAATTT+TGG | + | chr5_1:64913178-64913197 | None:intergenic | 30.0% |
| CCAAAATTTGCAAAGACTAA+AGG | - | chr5_1:64913175-64913194 | Msa0744200:intron | 30.0% | |
| CATACCAATCCCCATAAATT+TGG | + | chr5_1:64906904-64906923 | None:intergenic | 35.0% | |
| TATGAGATAGTGAAGCTCAA+GGG | - | chr5_1:64906920-64906939 | Msa0744200:CDS | 35.0% | |
| ATGGCTGAACAATCAAACTT+TGG | - | chr5_1:64907033-64907052 | Msa0744200:CDS | 35.0% | |
| TGGCTGAACAATCAAACTTT+GGG | - | chr5_1:64907034-64907053 | Msa0744200:CDS | 35.0% | |
| ! | ACTTCAATACGTAGTCCTTT+TGG | - | chr5_1:64907350-64907369 | Msa0744200:intron | 35.0% |
| TTCATCAAAGGAGTGAAGAA+GGG | + | chr5_1:64907496-64907515 | None:intergenic | 35.0% | |
| TTTCATCAAAGGAGTGAAGA+AGG | + | chr5_1:64907497-64907516 | None:intergenic | 35.0% | |
| TCACTCCTTTGATGAAAGAT+AGG | - | chr5_1:64907500-64907519 | Msa0744200:intron | 35.0% | |
| GAATGGAACCTGAAAATTGA+TGG | - | chr5_1:64907747-64907766 | Msa0744200:CDS | 35.0% | |
| CAACCGGCAATATGAAATAA+AGG | - | chr5_1:64907867-64907886 | Msa0744200:CDS | 35.0% | |
| !! | CCTAAAAGTGTTTGTTACGA+TGG | + | chr5_1:64908028-64908047 | None:intergenic | 35.0% |
| ! | CCATCGTAACAAACACTTTT+AGG | - | chr5_1:64908025-64908044 | Msa0744200:CDS | 35.0% |
| GAGCTCACACATATAATATG+TGG | - | chr5_1:64908475-64908494 | Msa0744200:CDS | 35.0% | |
| GGGATGGATGTGTATTTATA+TGG | + | chr5_1:64908521-64908540 | None:intergenic | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5_1:64909717-64909736 | Msa0744200:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5_1:64909723-64909742 | None:intergenic | 35.0% | |
| AAGTGGTTAAATACACCCTA+AGG | - | chr5_1:64909766-64909785 | Msa0744200:intron | 35.0% | |
| GTTATAGCAACATACACCTT+AGG | + | chr5_1:64909785-64909804 | None:intergenic | 35.0% | |
| CACCTTCTAACAATAACAAG+TGG | - | chr5_1:64909806-64909825 | Msa0744200:intron | 35.0% | |
| !! | ACCCACTTGTTATTGTTAGA+AGG | + | chr5_1:64909811-64909830 | None:intergenic | 35.0% |
| TGTGTTCTAGCAAATCCTAT+AGG | - | chr5_1:64909830-64909849 | Msa0744200:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5_1:64909717-64909736 | Msa0744200:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5_1:64909723-64909742 | None:intergenic | 35.0% | |
| TTTAGCAAAGCTACACCTTA+GGG | + | chr5_1:64909933-64909952 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAAGCTACACCTT+AGG | + | chr5_1:64909934-64909953 | None:intergenic | 35.0% |
| CACTCCCACATAAAAATTAG+TGG | - | chr5_1:64909954-64909973 | Msa0744200:intron | 35.0% | |
| ! | CACACCCACTAATTTTTATG+TGG | + | chr5_1:64909962-64909981 | None:intergenic | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5_1:64909717-64909736 | Msa0744200:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5_1:64909723-64909742 | None:intergenic | 35.0% | |
| CACCTTCTAACAAAAACAAG+TGG | - | chr5_1:64910153-64910172 | Msa0744200:intron | 35.0% | |
| !!! | ACCCACTTGTTTTTGTTAGA+AGG | + | chr5_1:64910158-64910177 | None:intergenic | 35.0% |
| !!! | ACACCCACTTACTTTTTAGA+AGG | - | chr5_1:64910213-64910232 | Msa0744200:intron | 35.0% |
| ! | AGAGGGATTTTCAAATGAGA+GGG | - | chr5_1:64910435-64910454 | Msa0744200:intron | 35.0% |
| GAGGATTAAATAGTGGTCAT+TGG | - | chr5_1:64910461-64910480 | Msa0744200:intron | 35.0% | |
| ! | TGGTCATTGGATTAGATAGA+TGG | - | chr5_1:64910474-64910493 | Msa0744200:intron | 35.0% |
| ! | AGTTGATGTATCTTTGTCCA+TGG | + | chr5_1:64910706-64910725 | None:intergenic | 35.0% |
| AACCACCTAAGATTAATGCA+GGG | + | chr5_1:64911013-64911032 | None:intergenic | 35.0% | |
| AAACCACCTAAGATTAATGC+AGG | + | chr5_1:64911014-64911033 | None:intergenic | 35.0% | |
| GTATTTGATACGTTAGCAGA+AGG | - | chr5_1:64911237-64911256 | Msa0744200:intron | 35.0% | |
| GAAAAATATGCACTCTCTGT+CGG | - | chr5_1:64911273-64911292 | Msa0744200:intron | 35.0% | |
| !! | GTATTTTGTTTGCTCGAAAG+AGG | - | chr5_1:64911353-64911372 | Msa0744200:intron | 35.0% |
| GGGTTATTTGCCAAATAAGA+AGG | - | chr5_1:64911374-64911393 | Msa0744200:intron | 35.0% | |
| TCCTTACCATCCTTCTTATT+TGG | + | chr5_1:64911387-64911406 | None:intergenic | 35.0% | |
| CTGTCAAGGTTAAAAGAAGA+AGG | - | chr5_1:64911421-64911440 | Msa0744200:intron | 35.0% | |
| !!! | ATGTTGTTTTCAAATGGGTG+GGG | - | chr5_1:64911472-64911491 | Msa0744200:intron | 35.0% |
| GCATGTAGTAGAGCAAATAT+AGG | - | chr5_1:64911618-64911637 | Msa0744200:intron | 35.0% | |
| ! | TTATTCCTTATTTGGGGATG+TGG | - | chr5_1:64911890-64911909 | Msa0744200:intron | 35.0% |
| ! | TTGATTTTTGCACCTTTCAC+CGG | - | chr5_1:64911951-64911970 | Msa0744200:intron | 35.0% |
| AGGTAATAGATTGTCGATGA+TGG | + | chr5_1:64911983-64912002 | None:intergenic | 35.0% | |
| CATCGACAATCTATTACCTT+CGG | - | chr5_1:64911984-64912003 | Msa0744200:intron | 35.0% | |
| TTTCATGGAAGGATCTTGAT+CGG | + | chr5_1:64912108-64912127 | None:intergenic | 35.0% | |
| GAATTCATCCTCATCATTCA+TGG | + | chr5_1:64912219-64912238 | None:intergenic | 35.0% | |
| ! | AGTTTCAAGTCATGTGTTTG+GGG | - | chr5_1:64912245-64912264 | Msa0744200:intron | 35.0% |
| CAAGTCTCTTCAAACTCATT+TGG | + | chr5_1:64912281-64912300 | None:intergenic | 35.0% | |
| CAAATGAGTTTGAAGAGACT+TGG | - | chr5_1:64912279-64912298 | Msa0744200:intron | 35.0% | |
| !! | CTTGGGTATTTTTGATGACA+AGG | - | chr5_1:64912297-64912316 | Msa0744200:intron | 35.0% |
| ! | TTCAAAGACACTTTTATGGC+AGG | - | chr5_1:64912389-64912408 | Msa0744200:intron | 35.0% |
| ! | TCAAAGACACTTTTATGGCA+GGG | - | chr5_1:64912390-64912409 | Msa0744200:intron | 35.0% |
| ! | CCATGTTCCAACAATAGTTT+TGG | + | chr5_1:64912578-64912597 | None:intergenic | 35.0% |
| CCAAAACTATTGTTGGAACA+TGG | - | chr5_1:64912575-64912594 | Msa0744200:intron | 35.0% | |
| TAAGAAAGATGAAGATGGGA+TGG | - | chr5_1:64912694-64912713 | Msa0744200:intron | 35.0% | |
| TTCAAAATGTTTCAGGCTGA+AGG | - | chr5_1:64912806-64912825 | Msa0744200:intron | 35.0% | |
| ACACAAAGTATGTGTCTACA+AGG | + | chr5_1:64912836-64912855 | None:intergenic | 35.0% | |
| CTATTCACAATGTGCTTACT+TGG | + | chr5_1:64912887-64912906 | None:intergenic | 35.0% | |
| CAAGTAAGCACATTGTGAAT+AGG | - | chr5_1:64912885-64912904 | Msa0744200:intron | 35.0% | |
| ACAAACTCATTTCTGATGTG+TGG | - | chr5_1:64912972-64912991 | Msa0744200:intron | 35.0% | |
| GTTAAATGGGGTTGTTAACA+TGG | - | chr5_1:64913054-64913073 | Msa0744200:intron | 35.0% | |
| AAGAATCAAATCATCTGTCC+TGG | + | chr5_1:64913119-64913138 | None:intergenic | 35.0% | |
| AGGACAGATGATTTGATTCT+TGG | - | chr5_1:64913118-64913137 | Msa0744200:intron | 35.0% | |
| GGACAGATGATTTGATTCTT+GGG | - | chr5_1:64913119-64913138 | Msa0744200:intron | 35.0% | |
| TTCTACTTCGTCAGGAATAT+TGG | + | chr5_1:64913146-64913165 | None:intergenic | 35.0% | |
| !! | TCTTTGCAAATTTTGGTGGA+AGG | + | chr5_1:64913171-64913190 | None:intergenic | 35.0% |
| TTTGCAAAGACTAAAGGTAG+TGG | - | chr5_1:64913181-64913200 | Msa0744200:intron | 35.0% | |
| ! | GGTAGTGGTAAAAGAATCAA+AGG | - | chr5_1:64913196-64913215 | Msa0744200:intron | 35.0% |
| AGTGGTAAAAGAATCAAAGG+TGG | - | chr5_1:64913199-64913218 | Msa0744200:intron | 35.0% | |
| AATCAAAGGTGGAAAAGAGA+AGG | - | chr5_1:64913210-64913229 | Msa0744200:intron | 35.0% | |
| GGAACCTCTCCCAAATTTAT+GGG | - | chr5_1:64906891-64906910 | Msa0744200:CDS | 40.0% | |
| GAACCTCTCCCAAATTTATG+GGG | - | chr5_1:64906892-64906911 | Msa0744200:CDS | 40.0% | |
| AATCCCCATAAATTTGGGAG+AGG | + | chr5_1:64906898-64906917 | None:intergenic | 40.0% | |
| TCTCCCAAATTTATGGGGAT+TGG | - | chr5_1:64906897-64906916 | Msa0744200:CDS | 40.0% | |
| GTATGAGATAGTGAAGCTCA+AGG | - | chr5_1:64906919-64906938 | Msa0744200:CDS | 40.0% | |
| ! | ACAATCAAACTTTGGGAGTG+AGG | - | chr5_1:64907041-64907060 | Msa0744200:CDS | 40.0% |
| ! | CAATCAAACTTTGGGAGTGA+GGG | - | chr5_1:64907042-64907061 | Msa0744200:CDS | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | - | chr5_1:64908449-64908468 | Msa0744200:CDS | 40.0% |
| TTCTTCCTCATGGATCAAAC+TGG | + | chr5_1:64908619-64908638 | None:intergenic | 40.0% | |
| AGTATCAAGCTTCTTCCTCA+TGG | + | chr5_1:64908629-64908648 | None:intergenic | 40.0% | |
| CAAGGAAGATTAGAGAGAAG+GGG | + | chr5_1:64909044-64909063 | None:intergenic | 40.0% | |
| CCAAGGAAGATTAGAGAGAA+GGG | + | chr5_1:64909045-64909064 | None:intergenic | 40.0% | |
| CCTTCTCTCTAATCTTCCTT+GGG | - | chr5_1:64909043-64909062 | Msa0744200:intron | 40.0% | |
| ! | ATTTTTGTCTGCATTCGCAC+AGG | - | chr5_1:64909155-64909174 | Msa0744200:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr5_1:64909716-64909735 | Msa0744200:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr5_1:64909724-64909743 | None:intergenic | 40.0% | |
| GTGTTCTAGCAAATGCCTAT+AGG | + | chr5_1:64909848-64909867 | None:intergenic | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr5_1:64909716-64909735 | Msa0744200:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr5_1:64909724-64909743 | None:intergenic | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr5_1:64909716-64909735 | Msa0744200:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr5_1:64909724-64909743 | None:intergenic | 40.0% | |
| TGTGTTCTAGCAAATCCTAC+AGG | - | chr5_1:64910177-64910196 | Msa0744200:intron | 40.0% | |
| GTGTTCTAGCAAATCCTACA+GGG | - | chr5_1:64910178-64910197 | Msa0744200:intron | 40.0% | |
| TGTTCTAGCAAATCCTACAG+GGG | - | chr5_1:64910179-64910198 | Msa0744200:intron | 40.0% | |
| TTTAGCAAAGCTACACCCTA+AGG | + | chr5_1:64910280-64910299 | None:intergenic | 40.0% | |
| ACTCCCACATAAAAACCAGT+GGG | - | chr5_1:64910302-64910321 | Msa0744200:intron | 40.0% | |
| !!! | ACACCCACTGGTTTTTATGT+GGG | + | chr5_1:64910308-64910327 | None:intergenic | 40.0% |
| TAGGGGATGTTTCAAATGAG+AGG | - | chr5_1:64910417-64910436 | Msa0744200:intron | 40.0% | |
| AGGGGATGTTTCAAATGAGA+GGG | - | chr5_1:64910418-64910437 | Msa0744200:intron | 40.0% | |
| ! | GAGAGGGATTTTCAAATGAG+AGG | - | chr5_1:64910434-64910453 | Msa0744200:intron | 40.0% |
| ! | TTTTCAAATGAGAGGGTGAG+AGG | - | chr5_1:64910442-64910461 | Msa0744200:intron | 40.0% |
| AGGGTGAGAGGATTAAATAG+TGG | - | chr5_1:64910454-64910473 | Msa0744200:intron | 40.0% | |
| GGTCAGTAATGAGAAGAACA+TGG | + | chr5_1:64910594-64910613 | None:intergenic | 40.0% | |
| GTTACGTTCATCATTCTCCA+TGG | - | chr5_1:64910686-64910705 | Msa0744200:intron | 40.0% | |
| CAACAACCAAATAGAACCAC+GGG | + | chr5_1:64910863-64910882 | None:intergenic | 40.0% | |
| CCAACAACCAAATAGAACCA+CGG | + | chr5_1:64910864-64910883 | None:intergenic | 40.0% | |
| AGAAGCCCTGCATTAATCTT+AGG | - | chr5_1:64911005-64911024 | Msa0744200:intron | 40.0% | |
| GCCAAATAAGAAGGATGGTA+AGG | - | chr5_1:64911383-64911402 | Msa0744200:intron | 40.0% | |
| GCAAAGTGAATCTACTGTCA+AGG | - | chr5_1:64911407-64911426 | Msa0744200:intron | 40.0% | |
| !!! | TGTTGTTTTCAAATGGGTGG+GGG | - | chr5_1:64911473-64911492 | Msa0744200:intron | 40.0% |
| TGTGGGGGTTATGAAAATGT+TGG | - | chr5_1:64911675-64911694 | Msa0744200:intron | 40.0% | |
| CCCAAAAAACATGCTTCAGT+CGG | + | chr5_1:64911848-64911867 | None:intergenic | 40.0% | |
| !!! | CCGACTGAAGCATGTTTTTT+GGG | - | chr5_1:64911845-64911864 | Msa0744200:intron | 40.0% |
| !!! | AAGCATGTTTTTTGGGCAGA+TGG | - | chr5_1:64911852-64911871 | Msa0744200:intron | 40.0% |
| TTTGGGCAGATGGTATTTGT+AGG | - | chr5_1:64911862-64911881 | Msa0744200:intron | 40.0% | |
| TGAAACCACATCCCCAAATA+AGG | + | chr5_1:64911898-64911917 | None:intergenic | 40.0% | |
| ! | TGATTTTTGCACCTTTCACC+GGG | - | chr5_1:64911952-64911971 | Msa0744200:intron | 40.0% |
| ! | TTGTCGATGATGGTTTATCC+CGG | + | chr5_1:64911973-64911992 | None:intergenic | 40.0% |
| !! | AAGTTTTTGGAAGCAATGGG+CGG | - | chr5_1:64912059-64912078 | Msa0744200:intron | 40.0% |
| TCAAGATCCTTCCATGAAAG+TGG | - | chr5_1:64912109-64912128 | Msa0744200:intron | 40.0% | |
| ! | TCTATAGCCACTTTCATGGA+AGG | + | chr5_1:64912119-64912138 | None:intergenic | 40.0% |
| CTACTCATAGATTGTGCATG+TGG | - | chr5_1:64912156-64912175 | Msa0744200:intron | 40.0% | |
| AGGTGTTTCCATGAATGATG+AGG | - | chr5_1:64912208-64912227 | Msa0744200:intron | 40.0% | |
| ! | TGTTTGAGATTCGAAGCACT+TGG | - | chr5_1:64912354-64912373 | Msa0744200:intron | 40.0% |
| ! | CAAAGACACTTTTATGGCAG+GGG | - | chr5_1:64912391-64912410 | Msa0744200:intron | 40.0% |
| ! | AATAGAAGCGCAACGACATA+AGG | - | chr5_1:64912517-64912536 | Msa0744200:intron | 40.0% |
| ! | TGAATTATGGATTGCATGCG+TGG | - | chr5_1:64912655-64912674 | Msa0744200:intron | 40.0% |
| GTAAGCACATTGTGAATAGG+TGG | - | chr5_1:64912888-64912907 | Msa0744200:intron | 40.0% | |
| TGACATAGCTGACAATGTCT+TGG | - | chr5_1:64912940-64912959 | Msa0744200:intron | 40.0% | |
| GGGAACCTCTCCCAAATTTA+TGG | - | chr5_1:64906890-64906909 | Msa0744200:CDS | 45.0% | |
| ATAGTGAAGCTCAAGGGAGA+AGG | - | chr5_1:64906926-64906945 | Msa0744200:CDS | 45.0% | |
| TTAACTAGCCATGCAGCAAC+CGG | - | chr5_1:64907851-64907870 | Msa0744200:CDS | 45.0% | |
| AATGGAGGAGATGAAGACCA+TGG | + | chr5_1:64908358-64908377 | None:intergenic | 45.0% | |
| GTGATCCAGTTTGATCCATG+AGG | - | chr5_1:64908611-64908630 | Msa0744200:intron | 45.0% | |
| TTAACGAATCCGTTGACACC+TGG | + | chr5_1:64908952-64908971 | None:intergenic | 45.0% | |
| CCCTTCTCTCTAATCTTCCT+TGG | - | chr5_1:64909042-64909061 | Msa0744200:intron | 45.0% | |
| CCCAAGGAAGATTAGAGAGA+AGG | + | chr5_1:64909046-64909065 | None:intergenic | 45.0% | |
| TCAACGAATCTGTTGACACC+TGG | - | chr5_1:64909642-64909661 | Msa0744200:intron | 45.0% | |
| ! | AAATCCTACAGGGGTTTGCT+AGG | - | chr5_1:64910188-64910207 | Msa0744200:intron | 45.0% |
| CACTCCCACATAAAAACCAG+TGG | - | chr5_1:64910301-64910320 | Msa0744200:intron | 45.0% | |
| !!! | CACACCCACTGGTTTTTATG+TGG | + | chr5_1:64910309-64910328 | None:intergenic | 45.0% |
| CTTTGTTAGAACACACCCAC+TGG | + | chr5_1:64910320-64910339 | None:intergenic | 45.0% | |
| GCAACGCGCGTATCATAAAT+TGG | + | chr5_1:64910546-64910565 | None:intergenic | 45.0% | |
| !! | TTGGTTCTATTTCTGTCCCG+TGG | - | chr5_1:64910844-64910863 | Msa0744200:intron | 45.0% |
| ! | TTCTGTCCCGTGGTTCTATT+TGG | - | chr5_1:64910854-64910873 | Msa0744200:intron | 45.0% |
| ! | CCGTGGTTCTATTTGGTTGT+TGG | - | chr5_1:64910861-64910880 | Msa0744200:intron | 45.0% |
| AGCCCTGCATTAATCTTAGG+TGG | - | chr5_1:64911008-64911027 | Msa0744200:intron | 45.0% | |
| ATAAAAACGGCGTGAAGCGT+TGG | - | chr5_1:64911328-64911347 | Msa0744200:intron | 45.0% | |
| GTGAAGCAAGTGGATGTGTA+TGG | + | chr5_1:64911533-64911552 | None:intergenic | 45.0% | |
| CTCTTCATAGGTGAAGCAAG+TGG | + | chr5_1:64911543-64911562 | None:intergenic | 45.0% | |
| CTGAGAAACGGTCTCTTCAT+AGG | + | chr5_1:64911555-64911574 | None:intergenic | 45.0% | |
| CTATGAAGAGACCGTTTCTC+AGG | - | chr5_1:64911553-64911572 | Msa0744200:intron | 45.0% | |
| TTCCTTGCAGACCTGAGAAA+CGG | + | chr5_1:64911567-64911586 | None:intergenic | 45.0% | |
| !!! | GCCGACTGAAGCATGTTTTT+TGG | - | chr5_1:64911844-64911863 | Msa0744200:intron | 45.0% |
| TGATGGTTTATCCCGGTGAA+AGG | + | chr5_1:64911966-64911985 | None:intergenic | 45.0% | |
| CAATCTATTACCTTCGGCGT+AGG | - | chr5_1:64911990-64912009 | Msa0744200:intron | 45.0% | |
| TGTTATAAGTCCTACGCCGA+AGG | + | chr5_1:64912003-64912022 | None:intergenic | 45.0% | |
| ! | TGTTGGAACATGGTATCGAG+AGG | - | chr5_1:64912585-64912604 | Msa0744200:intron | 45.0% |
| GAACCACTTACATAGCTGTG+TGG | - | chr5_1:64912994-64913013 | Msa0744200:intron | 45.0% | |
| TCTCCACACAGCTATGTAAG+TGG | + | chr5_1:64913000-64913019 | None:intergenic | 45.0% | |
| CTTACATAGCTGTGTGGAGA+AGG | - | chr5_1:64913000-64913019 | Msa0744200:intron | 45.0% | |
| GGAGAAGGCTGGAAAAGATA+AGG | - | chr5_1:64913015-64913034 | Msa0744200:intron | 45.0% | |
| !! | AAGGGAGTTCTAAGAGAACC+AGG | - | chr5_1:64913098-64913117 | Msa0744200:intron | 45.0% |
| GGAAGGATTTCTACTTCGTC+AGG | + | chr5_1:64913154-64913173 | None:intergenic | 45.0% | |
| !!! | ATAATATTCTTTTTTTAAAA+AGG | - | chr5_1:64908293-64908312 | Msa0744200:CDS | 5.0% |
| !!! | TAATATTCTTTTTTTAAAAA+GGG | - | chr5_1:64908294-64908313 | Msa0744200:CDS | 5.0% |
| !! | TTTAAATAAATGAAAATATA+TGG | - | chr5_1:64909523-64909542 | Msa0744200:intron | 5.0% |
| !! | CTATATATATATATATATAT+AGG | - | chr5_1:64909681-64909700 | Msa0744200:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr5_1:64909683-64909702 | Msa0744200:intron | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | chr5_1:64910031-64910050 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | - | chr5_1:64910031-64910050 | Msa0744200:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr5_1:64909683-64909702 | Msa0744200:intron | 5.0% |
| !!! | ATATTTATTTTGTTAATTTT+AGG | - | chr5_1:64911161-64911180 | Msa0744200:intron | 5.0% |
| GTCTATGCTTGGTCGCTCAA+GGG | + | chr5_1:64906971-64906990 | None:intergenic | 50.0% | |
| TCGACCTAAGCACGGTCTAT+TGG | - | chr5_1:64907005-64907024 | Msa0744200:CDS | 50.0% | |
| ACCTAAGCACGGTCTATTGG+AGG | - | chr5_1:64907008-64907027 | Msa0744200:CDS | 50.0% | |
| TCCTCCAATAGACCGTGCTT+AGG | + | chr5_1:64907012-64907031 | None:intergenic | 50.0% | |
| CTTCAATCACTGTTGCTGCG+CGG | + | chr5_1:64907795-64907814 | None:intergenic | 50.0% | |
| ! | TCATATTGCCGGTTGCTGCA+TGG | + | chr5_1:64907862-64907881 | None:intergenic | 50.0% |
| TCGGTCATCAACTCTCTCCA+TGG | - | chr5_1:64908338-64908357 | Msa0744200:CDS | 50.0% | |
| ! | ATGTGTGAGCTCTAGCCACT+AGG | + | chr5_1:64908467-64908486 | None:intergenic | 50.0% |
| AGAGGGGGGAAACGAAAATC+TGG | - | chr5_1:64909459-64909478 | Msa0744200:intron | 50.0% | |
| ! | CTGTTGACACCTGGTGTCAA+CGG | - | chr5_1:64909651-64909670 | Msa0744200:intron | 50.0% |
| GTATCCTAGCAAACCCCTGT+AGG | + | chr5_1:64910195-64910214 | None:intergenic | 50.0% | |
| GAAGTGAGAGGGAAGTGAGA+AGG | + | chr5_1:64910615-64910634 | None:intergenic | 50.0% | |
| TGGTTGGAGGTGAAGTGAGA+GGG | + | chr5_1:64910626-64910645 | None:intergenic | 50.0% | |
| TTGGTTGGAGGTGAAGTGAG+AGG | + | chr5_1:64910627-64910646 | None:intergenic | 50.0% | |
| ! | GTTTTCAAATGGGTGGGGGA+AGG | - | chr5_1:64911477-64911496 | Msa0744200:intron | 50.0% |
| GCGTATGAGGTAGGTGAAGA+AGG | - | chr5_1:64911822-64911841 | Msa0744200:intron | 50.0% | |
| ! | TGGATTGCATGCGTGGATTG+TGG | - | chr5_1:64912662-64912681 | Msa0744200:intron | 50.0% |
| GGTCTATGCTTGGTCGCTCA+AGG | + | chr5_1:64906972-64906991 | None:intergenic | 55.0% | |
| ACGCGACAAGGGTCTATGCT+TGG | + | chr5_1:64906982-64907001 | None:intergenic | 55.0% | |
| AGCATAGACCCTTGTCGCGT+TGG | - | chr5_1:64906982-64907001 | Msa0744200:CDS | 55.0% | |
| TAGGTCGACCAACGCGACAA+GGG | + | chr5_1:64906993-64907012 | None:intergenic | 55.0% | |
| TTAGGTCGACCAACGCGACA+AGG | + | chr5_1:64906994-64907013 | None:intergenic | 55.0% | |
| GCACGGTCTATTGGAGGACA+TGG | - | chr5_1:64907014-64907033 | Msa0744200:CDS | 55.0% | |
| TGTCAGGATCCGTTGACACC+AGG | - | chr5_1:64908931-64908950 | Msa0744200:CDS | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | + | chr5_1:64908943-64908962 | None:intergenic | 55.0% |
| CCGTTGACACCAGGTGTCAA+CGG | - | chr5_1:64908940-64908959 | Msa0744200:CDS | 55.0% | |
| TAGAGAGAAGGGGCTACCTG+AGG | + | chr5_1:64909034-64909053 | None:intergenic | 55.0% | |
| AGTCAGGATCCGTTGACACC+AGG | + | chr5_1:64909663-64909682 | None:intergenic | 55.0% | |
| GACCGTTTCTCAGGTCTGCA+AGG | - | chr5_1:64911562-64911581 | Msa0744200:intron | 55.0% | |
| CATAGCTGTGTGGAGAAGGC+TGG | - | chr5_1:64913004-64913023 | Msa0744200:intron | 55.0% | |
| ! | CGCGTTGGTCGACCTAAGCA+CGG | - | chr5_1:64906997-64907016 | Msa0744200:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 64906886 | 64913270 | 64906886 | ID=Msa0744200;Name=Msa0744200 |
| chr5_1 | mRNA | 64906886 | 64913270 | 64906886 | ID=Msa0744200-mRNA-1;Parent=Msa0744200;Name=Msa0744200-mRNA-1;_AED=0.35;_eAED=0.37;_QI=0|0|0|0.75|1|1|4|0|551 |
| chr5_1 | exon | 64913238 | 64913270 | 64913238 | ID=Msa0744200-mRNA-1:exon:19283;Parent=Msa0744200-mRNA-1 |
| chr5_1 | exon | 64908728 | 64908973 | 64908728 | ID=Msa0744200-mRNA-1:exon:19282;Parent=Msa0744200-mRNA-1 |
| chr5_1 | exon | 64907669 | 64908595 | 64907669 | ID=Msa0744200-mRNA-1:exon:19281;Parent=Msa0744200-mRNA-1 |
| chr5_1 | exon | 64906886 | 64907335 | 64906886 | ID=Msa0744200-mRNA-1:exon:19280;Parent=Msa0744200-mRNA-1 |
| chr5_1 | CDS | 64913238 | 64913270 | 64913238 | ID=Msa0744200-mRNA-1:cds;Parent=Msa0744200-mRNA-1 |
| chr5_1 | CDS | 64908728 | 64908973 | 64908728 | ID=Msa0744200-mRNA-1:cds;Parent=Msa0744200-mRNA-1 |
| chr5_1 | CDS | 64907669 | 64908595 | 64907669 | ID=Msa0744200-mRNA-1:cds;Parent=Msa0744200-mRNA-1 |
| chr5_1 | CDS | 64906886 | 64907335 | 64906886 | ID=Msa0744200-mRNA-1:cds;Parent=Msa0744200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
