Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744980 | XP_003618052.1 | 90.299 | 268 | 24 | 1 | 1 | 266 | 1 | 268 | 9.60e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744980 | G7K0M6 | 90.299 | 268 | 24 | 1 | 1 | 266 | 1 | 268 | 4.59e-173 | 487 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0744980 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744980 | MtrunA17_Chr5g0448221 | 90.299 | 268 | 24 | 1 | 1 | 266 | 1 | 268 | 8.83e-177 | 487 |
| Msa0744980 | MtrunA17_Chr2g0331601 | 30.374 | 214 | 94 | 8 | 18 | 207 | 105 | 287 | 9.42e-15 | 73.2 |
| Msa0744980 | MtrunA17_Chr1g0169561 | 32.039 | 206 | 84 | 9 | 44 | 202 | 14 | 210 | 1.50e-13 | 69.3 |
| Msa0744980 | MtrunA17_Chr1g0169521 | 31.282 | 195 | 85 | 7 | 49 | 202 | 24 | 210 | 3.24e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744980 | AT5G56200.1 | 44.048 | 84 | 41 | 1 | 60 | 137 | 77 | 160 | 1.17e-12 | 67.8 |
| Msa0744980 | AT2G26940.1 | 33.981 | 103 | 43 | 1 | 62 | 139 | 49 | 151 | 5.76e-12 | 65.1 |
Find 49 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATATTATTATCCTTATT+AGG | 0.131951 | 5_1:+66120096 | None:intergenic |
| ATACCCCTCCATTCCCTTTC+AGG | 0.172402 | 5_1:+66120123 | None:intergenic |
| GTGACCATGTAAAGCCTTAT+TGG | 0.177322 | 5_1:+66120158 | None:intergenic |
| ATCATCAATAACCAATTCTT+TGG | 0.220906 | 5_1:+66120026 | None:intergenic |
| CAATATTATTATCCTTATTA+GGG | 0.247792 | 5_1:+66120097 | None:intergenic |
| CATCAAACTTATTCTTCTTT+TGG | 0.256389 | 5_1:+66120587 | None:intergenic |
| AATAACCAATTCTTTGGAAT+TGG | 0.272420 | 5_1:+66120032 | None:intergenic |
| TCATCTTGATGATGATCCTT+TGG | 0.317224 | 5_1:+66120372 | None:intergenic |
| CGACAACTTCAATGAGGATT+TGG | 0.318999 | 5_1:-66119887 | Msa0744980:CDS |
| TGCATCCAATTCCAAAGAAT+TGG | 0.334606 | 5_1:-66120037 | Msa0744980:CDS |
| CTTTCCCTAGAGCTTGACTA+TGG | 0.341322 | 5_1:+66120262 | None:intergenic |
| TTGATGATGAATCAAAATCT+TGG | 0.371768 | 5_1:-66120011 | Msa0744980:CDS |
| TTCAGGTGTGGAAAAGGATT+AGG | 0.375373 | 5_1:-66120300 | Msa0744980:CDS |
| GAGGGGTATGAACCCTAATA+AGG | 0.375613 | 5_1:-66120109 | Msa0744980:CDS |
| TACCCCTCCATTCCCTTTCA+GGG | 0.375926 | 5_1:+66120124 | None:intergenic |
| AAAGAACTTCCAATCCAATA+AGG | 0.383910 | 5_1:-66120172 | Msa0744980:CDS |
| GTTGTCGTGTAAATGTTTAT+CGG | 0.409444 | 5_1:+66119903 | None:intergenic |
| TGATGATGAATCAAAATCTT+GGG | 0.427675 | 5_1:-66120010 | Msa0744980:CDS |
| CATGTAAAGCCTTATTGGAT+TGG | 0.438633 | 5_1:+66120163 | None:intergenic |
| TTTGGATGATGAGGATAAGA+AGG | 0.451348 | 5_1:-66119869 | Msa0744980:CDS |
| CAATCCAATAAGGCTTTACA+TGG | 0.457233 | 5_1:-66120162 | Msa0744980:CDS |
| GCTAATTGCAATTCTAATGA+TGG | 0.457837 | 5_1:-66120219 | Msa0744980:CDS |
| GCACGAAGATTGTTTAAAAC+CGG | 0.468350 | 5_1:-66119988 | Msa0744980:CDS |
| CCTAGTACTAGTGGTCTTGT+TGG | 0.468849 | 5_1:-66119835 | Msa0744980:CDS |
| CAAAAGAAGAATAAGTTTGA+TGG | 0.471977 | 5_1:-66120586 | Msa0744980:CDS |
| AGAATCCATAGTCAAGCTCT+AGG | 0.477759 | 5_1:-66120267 | Msa0744980:CDS |
| CATGAGATCTCACCCTGAAA+GGG | 0.502988 | 5_1:-66120136 | Msa0744980:CDS |
| CCAACAAGACCACTAGTACT+AGG | 0.509402 | 5_1:+66119835 | None:intergenic |
| TTGTTTAAAACCGGTAAAAG+AGG | 0.519380 | 5_1:-66119979 | Msa0744980:CDS |
| ACATGAGATCTCACCCTGAA+AGG | 0.521597 | 5_1:-66120137 | Msa0744980:CDS |
| AAGGATCATCATCAAGATGA+AGG | 0.523519 | 5_1:-66120369 | Msa0744980:CDS |
| TGATGGTGGTAGGATACATC+AGG | 0.528563 | 5_1:-66120569 | Msa0744980:intron |
| TAGTCAAGCTCTAGGGAAAG+AGG | 0.530133 | 5_1:-66120259 | Msa0744980:CDS |
| AGAATGACAATAACAAAAGA+AGG | 0.532053 | 5_1:-66119789 | Msa0744980:CDS |
| CAATGAGGATTTGGATGATG+AGG | 0.536568 | 5_1:-66119878 | Msa0744980:CDS |
| AGAATAAGTTTGATGGTGGT+AGG | 0.553715 | 5_1:-66120579 | Msa0744980:CDS |
| GATCTCACCCTGAAAGGGAA+TGG | 0.563550 | 5_1:-66120131 | Msa0744980:CDS |
| GAATCCATAGTCAAGCTCTA+GGG | 0.567403 | 5_1:-66120266 | Msa0744980:CDS |
| TCACCCTGAAAGGGAATGGA+GGG | 0.580204 | 5_1:-66120127 | Msa0744980:CDS |
| CTCACCCTGAAAGGGAATGG+AGG | 0.583418 | 5_1:-66120128 | Msa0744980:CDS |
| TAACAAAAGAAGGAAGAAGC+TGG | 0.586820 | 5_1:-66119779 | Msa0744980:CDS |
| GGTAAAAGAGGTCGTTCGAG+TGG | 0.603484 | 5_1:-66119967 | Msa0744980:CDS |
| AGTCAAGCTCTAGGGAAAGA+GGG | 0.609576 | 5_1:-66120258 | Msa0744980:CDS |
| AGGTGTGGAAAAGGATTAGG+TGG | 0.609624 | 5_1:-66120297 | Msa0744980:CDS |
| TTTACACGACAACTTCAATG+AGG | 0.617038 | 5_1:-66119893 | Msa0744980:CDS |
| AAGAAGAATAAGTTTGATGG+TGG | 0.622051 | 5_1:-66120583 | Msa0744980:CDS |
| AATGTTGTACCTAGTACTAG+TGG | 0.625803 | 5_1:-66119844 | Msa0744980:CDS |
| CACCCTGAAAGGGAATGGAG+GGG | 0.655548 | 5_1:-66120126 | Msa0744980:CDS |
| AGAGGGTGAGTCGAAAGCAA+AGG | 0.661254 | 5_1:-66120241 | Msa0744980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTTTAATAGAATTCT+AGG | - | chr5_1:66119857-66119876 | Msa0744980:CDS | 15.0% |
| !!! | TTTCTTTTAATAGAATTCTA+GGG | - | chr5_1:66119858-66119877 | Msa0744980:CDS | 15.0% |
| !!! | AATTTTGTAACAAAATTTTC+AGG | - | chr5_1:66120010-66120029 | Msa0744980:CDS | 15.0% |
| !! | CAATATTATTATCCTTATTA+GGG | + | chr5_1:66120233-66120252 | None:intergenic | 15.0% |
| !! | TCAATATTATTATCCTTATT+AGG | + | chr5_1:66120234-66120253 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTAATAGAATTCT+AGG | - | chr5_1:66119857-66119876 | Msa0744980:CDS | 15.0% |
| !!! | TTTCTTTTAATAGAATTCTA+GGG | - | chr5_1:66119858-66119877 | Msa0744980:CDS | 15.0% |
| !!! | AATTTTGTAACAAAATTTTC+AGG | - | chr5_1:66120010-66120029 | Msa0744980:CDS | 15.0% |
| !! | CAATATTATTATCCTTATTA+GGG | + | chr5_1:66120233-66120252 | None:intergenic | 15.0% |
| !! | TCAATATTATTATCCTTATT+AGG | + | chr5_1:66120234-66120253 | None:intergenic | 15.0% |
| !! | TAAAGTTTATGAAAAACCAA+AGG | - | chr5_1:66119939-66119958 | Msa0744980:CDS | 20.0% |
| !! | TAAAGTTTATGAAAAACCAA+AGG | - | chr5_1:66119939-66119958 | Msa0744980:CDS | 20.0% |
| !! | TTATTCTTCTTTTGGTCATT+GGG | + | chr5_1:66119735-66119754 | None:intergenic | 25.0% |
| !! | CATCAAACTTATTCTTCTTT+TGG | + | chr5_1:66119743-66119762 | None:intergenic | 25.0% |
| ! | CAAAAGAAGAATAAGTTTGA+TGG | - | chr5_1:66119741-66119760 | Msa0744980:CDS | 25.0% |
| !! | TAAACTTTTCTTCTTCTCTA+TGG | + | chr5_1:66119899-66119918 | None:intergenic | 25.0% |
| !!! | AATAACCAATTCTTTGGAAT+TGG | + | chr5_1:66120298-66120317 | None:intergenic | 25.0% |
| ! | ATCATCAATAACCAATTCTT+TGG | + | chr5_1:66120304-66120323 | None:intergenic | 25.0% |
| !!! | TTGATGATGAATCAAAATCT+TGG | - | chr5_1:66120316-66120335 | Msa0744980:CDS | 25.0% |
| !! | TGATGATGAATCAAAATCTT+GGG | - | chr5_1:66120317-66120336 | Msa0744980:CDS | 25.0% |
| ! | AGAATGACAATAACAAAAGA+AGG | - | chr5_1:66120538-66120557 | Msa0744980:intron | 25.0% |
| !! | TTATCTTTTGATGTTGAACA+TGG | + | chr5_1:66120588-66120607 | None:intergenic | 25.0% |
| !! | TTATTCTTCTTTTGGTCATT+GGG | + | chr5_1:66119735-66119754 | None:intergenic | 25.0% |
| !! | CATCAAACTTATTCTTCTTT+TGG | + | chr5_1:66119743-66119762 | None:intergenic | 25.0% |
| ! | CAAAAGAAGAATAAGTTTGA+TGG | - | chr5_1:66119741-66119760 | Msa0744980:CDS | 25.0% |
| !! | TAAACTTTTCTTCTTCTCTA+TGG | + | chr5_1:66119899-66119918 | None:intergenic | 25.0% |
| !!! | AATAACCAATTCTTTGGAAT+TGG | + | chr5_1:66120298-66120317 | None:intergenic | 25.0% |
| ! | ATCATCAATAACCAATTCTT+TGG | + | chr5_1:66120304-66120323 | None:intergenic | 25.0% |
| !!! | TTGATGATGAATCAAAATCT+TGG | - | chr5_1:66120316-66120335 | Msa0744980:CDS | 25.0% |
| !! | TGATGATGAATCAAAATCTT+GGG | - | chr5_1:66120317-66120336 | Msa0744980:CDS | 25.0% |
| ! | AGAATGACAATAACAAAAGA+AGG | - | chr5_1:66120538-66120557 | Msa0744980:intron | 25.0% |
| !! | TTATCTTTTGATGTTGAACA+TGG | + | chr5_1:66120588-66120607 | None:intergenic | 25.0% |
| ! | CTTATTCTTCTTTTGGTCAT+TGG | + | chr5_1:66119736-66119755 | None:intergenic | 30.0% |
| AAGAAGAATAAGTTTGATGG+TGG | - | chr5_1:66119744-66119763 | Msa0744980:CDS | 30.0% | |
| !!! | TGTAACAAAATTTTCAGGTG+TGG | - | chr5_1:66120015-66120034 | Msa0744980:CDS | 30.0% |
| !!! | AAAATTTTCAGGTGTGGAAA+AGG | - | chr5_1:66120021-66120040 | Msa0744980:CDS | 30.0% |
| GCTAATTGCAATTCTAATGA+TGG | - | chr5_1:66120108-66120127 | Msa0744980:CDS | 30.0% | |
| AAAGAACTTCCAATCCAATA+AGG | - | chr5_1:66120155-66120174 | Msa0744980:CDS | 30.0% | |
| ! | TTGTTTAAAACCGGTAAAAG+AGG | - | chr5_1:66120348-66120367 | Msa0744980:CDS | 30.0% |
| GTTGTCGTGTAAATGTTTAT+CGG | + | chr5_1:66120427-66120446 | None:intergenic | 30.0% | |
| ! | CTTATTCTTCTTTTGGTCAT+TGG | + | chr5_1:66119736-66119755 | None:intergenic | 30.0% |
| AAGAAGAATAAGTTTGATGG+TGG | - | chr5_1:66119744-66119763 | Msa0744980:CDS | 30.0% | |
| !!! | TGTAACAAAATTTTCAGGTG+TGG | - | chr5_1:66120015-66120034 | Msa0744980:CDS | 30.0% |
| !!! | AAAATTTTCAGGTGTGGAAA+AGG | - | chr5_1:66120021-66120040 | Msa0744980:CDS | 30.0% |
| GCTAATTGCAATTCTAATGA+TGG | - | chr5_1:66120108-66120127 | Msa0744980:CDS | 30.0% | |
| AAAGAACTTCCAATCCAATA+AGG | - | chr5_1:66120155-66120174 | Msa0744980:CDS | 30.0% | |
| ! | TTGTTTAAAACCGGTAAAAG+AGG | - | chr5_1:66120348-66120367 | Msa0744980:CDS | 30.0% |
| GTTGTCGTGTAAATGTTTAT+CGG | + | chr5_1:66120427-66120446 | None:intergenic | 30.0% | |
| !! | AGAATAAGTTTGATGGTGGT+AGG | - | chr5_1:66119748-66119767 | Msa0744980:CDS | 35.0% |
| ! | CTTCTTCTCTATGGTTTTCA+TGG | + | chr5_1:66119890-66119909 | None:intergenic | 35.0% |
| !! | TCATCTTGATGATGATCCTT+TGG | + | chr5_1:66119958-66119977 | None:intergenic | 35.0% |
| AAGGATCATCATCAAGATGA+AGG | - | chr5_1:66119958-66119977 | Msa0744980:CDS | 35.0% | |
| !! | CATGTAAAGCCTTATTGGAT+TGG | + | chr5_1:66120167-66120186 | None:intergenic | 35.0% |
| CAATCCAATAAGGCTTTACA+TGG | - | chr5_1:66120165-66120184 | Msa0744980:CDS | 35.0% | |
| TGCATCCAATTCCAAAGAAT+TGG | - | chr5_1:66120290-66120309 | Msa0744980:CDS | 35.0% | |
| ! | GCACGAAGATTGTTTAAAAC+CGG | - | chr5_1:66120339-66120358 | Msa0744980:CDS | 35.0% |
| TTTACACGACAACTTCAATG+AGG | - | chr5_1:66120434-66120453 | Msa0744980:CDS | 35.0% | |
| TTTGGATGATGAGGATAAGA+AGG | - | chr5_1:66120458-66120477 | Msa0744980:CDS | 35.0% | |
| AATGTTGTACCTAGTACTAG+TGG | - | chr5_1:66120483-66120502 | Msa0744980:intron | 35.0% | |
| TAACAAAAGAAGGAAGAAGC+TGG | - | chr5_1:66120548-66120567 | Msa0744980:intron | 35.0% | |
| !! | AGAATAAGTTTGATGGTGGT+AGG | - | chr5_1:66119748-66119767 | Msa0744980:CDS | 35.0% |
| ! | CTTCTTCTCTATGGTTTTCA+TGG | + | chr5_1:66119890-66119909 | None:intergenic | 35.0% |
| !! | TCATCTTGATGATGATCCTT+TGG | + | chr5_1:66119958-66119977 | None:intergenic | 35.0% |
| AAGGATCATCATCAAGATGA+AGG | - | chr5_1:66119958-66119977 | Msa0744980:CDS | 35.0% | |
| !! | CATGTAAAGCCTTATTGGAT+TGG | + | chr5_1:66120167-66120186 | None:intergenic | 35.0% |
| CAATCCAATAAGGCTTTACA+TGG | - | chr5_1:66120165-66120184 | Msa0744980:CDS | 35.0% | |
| TGCATCCAATTCCAAAGAAT+TGG | - | chr5_1:66120290-66120309 | Msa0744980:CDS | 35.0% | |
| ! | GCACGAAGATTGTTTAAAAC+CGG | - | chr5_1:66120339-66120358 | Msa0744980:CDS | 35.0% |
| TTTACACGACAACTTCAATG+AGG | - | chr5_1:66120434-66120453 | Msa0744980:CDS | 35.0% | |
| TTTGGATGATGAGGATAAGA+AGG | - | chr5_1:66120458-66120477 | Msa0744980:CDS | 35.0% | |
| AATGTTGTACCTAGTACTAG+TGG | - | chr5_1:66120483-66120502 | Msa0744980:intron | 35.0% | |
| TAACAAAAGAAGGAAGAAGC+TGG | - | chr5_1:66120548-66120567 | Msa0744980:intron | 35.0% | |
| TTCAGGTGTGGAAAAGGATT+AGG | - | chr5_1:66120027-66120046 | Msa0744980:CDS | 40.0% | |
| AGAATCCATAGTCAAGCTCT+AGG | - | chr5_1:66120060-66120079 | Msa0744980:CDS | 40.0% | |
| GAATCCATAGTCAAGCTCTA+GGG | - | chr5_1:66120061-66120080 | Msa0744980:CDS | 40.0% | |
| ! | GTGACCATGTAAAGCCTTAT+TGG | + | chr5_1:66120172-66120191 | None:intergenic | 40.0% |
| CGACAACTTCAATGAGGATT+TGG | - | chr5_1:66120440-66120459 | Msa0744980:CDS | 40.0% | |
| CAATGAGGATTTGGATGATG+AGG | - | chr5_1:66120449-66120468 | Msa0744980:CDS | 40.0% | |
| TTCAGGTGTGGAAAAGGATT+AGG | - | chr5_1:66120027-66120046 | Msa0744980:CDS | 40.0% | |
| AGAATCCATAGTCAAGCTCT+AGG | - | chr5_1:66120060-66120079 | Msa0744980:CDS | 40.0% | |
| GAATCCATAGTCAAGCTCTA+GGG | - | chr5_1:66120061-66120080 | Msa0744980:CDS | 40.0% | |
| ! | GTGACCATGTAAAGCCTTAT+TGG | + | chr5_1:66120172-66120191 | None:intergenic | 40.0% |
| CGACAACTTCAATGAGGATT+TGG | - | chr5_1:66120440-66120459 | Msa0744980:CDS | 40.0% | |
| CAATGAGGATTTGGATGATG+AGG | - | chr5_1:66120449-66120468 | Msa0744980:CDS | 40.0% | |
| !! | TGATGGTGGTAGGATACATC+AGG | - | chr5_1:66119758-66119777 | Msa0744980:CDS | 45.0% |
| AGGTGTGGAAAAGGATTAGG+TGG | - | chr5_1:66120030-66120049 | Msa0744980:CDS | 45.0% | |
| CTTTCCCTAGAGCTTGACTA+TGG | + | chr5_1:66120068-66120087 | None:intergenic | 45.0% | |
| !! | TAGTCAAGCTCTAGGGAAAG+AGG | - | chr5_1:66120068-66120087 | Msa0744980:CDS | 45.0% |
| !! | AGTCAAGCTCTAGGGAAAGA+GGG | - | chr5_1:66120069-66120088 | Msa0744980:CDS | 45.0% |
| ACATGAGATCTCACCCTGAA+AGG | - | chr5_1:66120190-66120209 | Msa0744980:CDS | 45.0% | |
| CATGAGATCTCACCCTGAAA+GGG | - | chr5_1:66120191-66120210 | Msa0744980:CDS | 45.0% | |
| ! | GAGGGGTATGAACCCTAATA+AGG | - | chr5_1:66120218-66120237 | Msa0744980:CDS | 45.0% |
| ! | ACTCGAACGACCTCTTTTAC+CGG | + | chr5_1:66120361-66120380 | None:intergenic | 45.0% |
| CCAACAAGACCACTAGTACT+AGG | + | chr5_1:66120495-66120514 | None:intergenic | 45.0% | |
| !! | CCTAGTACTAGTGGTCTTGT+TGG | - | chr5_1:66120492-66120511 | Msa0744980:intron | 45.0% |
| !! | TGATGGTGGTAGGATACATC+AGG | - | chr5_1:66119758-66119777 | Msa0744980:CDS | 45.0% |
| AGGTGTGGAAAAGGATTAGG+TGG | - | chr5_1:66120030-66120049 | Msa0744980:CDS | 45.0% | |
| CTTTCCCTAGAGCTTGACTA+TGG | + | chr5_1:66120068-66120087 | None:intergenic | 45.0% | |
| !! | TAGTCAAGCTCTAGGGAAAG+AGG | - | chr5_1:66120068-66120087 | Msa0744980:CDS | 45.0% |
| !! | AGTCAAGCTCTAGGGAAAGA+GGG | - | chr5_1:66120069-66120088 | Msa0744980:CDS | 45.0% |
| ACATGAGATCTCACCCTGAA+AGG | - | chr5_1:66120190-66120209 | Msa0744980:CDS | 45.0% | |
| CATGAGATCTCACCCTGAAA+GGG | - | chr5_1:66120191-66120210 | Msa0744980:CDS | 45.0% | |
| ! | GAGGGGTATGAACCCTAATA+AGG | - | chr5_1:66120218-66120237 | Msa0744980:CDS | 45.0% |
| ! | ACTCGAACGACCTCTTTTAC+CGG | + | chr5_1:66120361-66120380 | None:intergenic | 45.0% |
| CCAACAAGACCACTAGTACT+AGG | + | chr5_1:66120495-66120514 | None:intergenic | 45.0% | |
| !! | CCTAGTACTAGTGGTCTTGT+TGG | - | chr5_1:66120492-66120511 | Msa0744980:intron | 45.0% |
| !! | AAAGAATATTAAATATAAAA+AGG | + | chr5_1:66119799-66119818 | None:intergenic | 5.0% |
| !! | AAAGAATATTAAATATAAAA+AGG | + | chr5_1:66119799-66119818 | None:intergenic | 5.0% |
| AGAGGGTGAGTCGAAAGCAA+AGG | - | chr5_1:66120086-66120105 | Msa0744980:CDS | 50.0% | |
| GATCTCACCCTGAAAGGGAA+TGG | - | chr5_1:66120196-66120215 | Msa0744980:CDS | 50.0% | |
| TCACCCTGAAAGGGAATGGA+GGG | - | chr5_1:66120200-66120219 | Msa0744980:CDS | 50.0% | |
| TACCCCTCCATTCCCTTTCA+GGG | + | chr5_1:66120206-66120225 | None:intergenic | 50.0% | |
| ATACCCCTCCATTCCCTTTC+AGG | + | chr5_1:66120207-66120226 | None:intergenic | 50.0% | |
| GGTAAAAGAGGTCGTTCGAG+TGG | - | chr5_1:66120360-66120379 | Msa0744980:CDS | 50.0% | |
| AGAGGGTGAGTCGAAAGCAA+AGG | - | chr5_1:66120086-66120105 | Msa0744980:CDS | 50.0% | |
| GATCTCACCCTGAAAGGGAA+TGG | - | chr5_1:66120196-66120215 | Msa0744980:CDS | 50.0% | |
| TCACCCTGAAAGGGAATGGA+GGG | - | chr5_1:66120200-66120219 | Msa0744980:CDS | 50.0% | |
| TACCCCTCCATTCCCTTTCA+GGG | + | chr5_1:66120206-66120225 | None:intergenic | 50.0% | |
| ATACCCCTCCATTCCCTTTC+AGG | + | chr5_1:66120207-66120226 | None:intergenic | 50.0% | |
| GGTAAAAGAGGTCGTTCGAG+TGG | - | chr5_1:66120360-66120379 | Msa0744980:CDS | 50.0% | |
| CTCACCCTGAAAGGGAATGG+AGG | - | chr5_1:66120199-66120218 | Msa0744980:CDS | 55.0% | |
| CACCCTGAAAGGGAATGGAG+GGG | - | chr5_1:66120201-66120220 | Msa0744980:CDS | 55.0% | |
| CTCACCCTGAAAGGGAATGG+AGG | - | chr5_1:66120199-66120218 | Msa0744980:CDS | 55.0% | |
| CACCCTGAAAGGGAATGGAG+GGG | - | chr5_1:66120201-66120220 | Msa0744980:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 66119726 | 66120623 | 66119726 | ID=Msa0744980;Name=Msa0744980 |
| chr5_1 | mRNA | 66119726 | 66120623 | 66119726 | ID=Msa0744980-mRNA-1;Parent=Msa0744980;Name=Msa0744980-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|268 |
| chr5_1 | exon | 66120570 | 66120623 | 66120570 | ID=Msa0744980-mRNA-1:exon:19677;Parent=Msa0744980-mRNA-1 |
| chr5_1 | exon | 66119726 | 66120478 | 66119726 | ID=Msa0744980-mRNA-1:exon:19676;Parent=Msa0744980-mRNA-1 |
| chr5_1 | CDS | 66120570 | 66120623 | 66120570 | ID=Msa0744980-mRNA-1:cds;Parent=Msa0744980-mRNA-1 |
| chr5_1 | CDS | 66119726 | 66120478 | 66119726 | ID=Msa0744980-mRNA-1:cds;Parent=Msa0744980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
