Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745870 | XP_024639128.2 | 87.527 | 465 | 41 | 2 | 4 | 455 | 1 | 461 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745870 | sp|Q8S9H7|DIV_ANTMA | 63.014 | 73 | 23 | 2 | 264 | 335 | 134 | 203 | 1.06e-21 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745870 | G7K310 | 87.527 | 465 | 41 | 2 | 4 | 455 | 1 | 461 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0745870 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745870 | MtrunA17_Chr5g0440741 | 88.889 | 279 | 27 | 1 | 177 | 455 | 15 | 289 | 6.93e-170 | 478 |
| Msa0745870 | MtrunA17_Chr5g0440731 | 87.676 | 284 | 26 | 2 | 177 | 455 | 15 | 294 | 1.31e-168 | 475 |
| Msa0745870 | MtrunA17_Chr5g0440751 | 83.598 | 189 | 18 | 1 | 4 | 179 | 1 | 189 | 5.56e-106 | 312 |
| Msa0745870 | MtrunA17_Chr5g0440721 | 90.667 | 150 | 14 | 0 | 8 | 157 | 12 | 161 | 9.38e-95 | 283 |
| Msa0745870 | MtrunA17_Chr5g0440821 | 68.018 | 222 | 14 | 3 | 12 | 176 | 23 | 244 | 1.24e-86 | 284 |
| Msa0745870 | MtrunA17_Chr5g0409841 | 66.383 | 235 | 64 | 7 | 179 | 402 | 1 | 231 | 8.76e-86 | 262 |
| Msa0745870 | MtrunA17_Chr5g0409831 | 48.630 | 292 | 72 | 8 | 179 | 455 | 1 | 229 | 1.81e-62 | 202 |
| Msa0745870 | MtrunA17_Chr5g0409951 | 56.579 | 152 | 36 | 3 | 6 | 127 | 99 | 250 | 1.89e-40 | 145 |
| Msa0745870 | MtrunA17_Chr5g0409951 | 55.670 | 97 | 29 | 3 | 177 | 267 | 22 | 110 | 7.15e-19 | 86.3 |
| Msa0745870 | MtrunA17_Chr5g0429521 | 58.228 | 79 | 29 | 2 | 264 | 341 | 134 | 209 | 2.34e-22 | 97.1 |
| Msa0745870 | MtrunA17_Chr3g0104071 | 56.627 | 83 | 32 | 2 | 264 | 345 | 149 | 228 | 4.76e-22 | 96.7 |
| Msa0745870 | MtrunA17_Chr1g0162081 | 57.534 | 73 | 27 | 2 | 264 | 335 | 124 | 193 | 9.66e-22 | 95.1 |
| Msa0745870 | MtrunA17_Chr1g0210471 | 46.364 | 110 | 43 | 3 | 264 | 372 | 126 | 220 | 1.94e-21 | 93.2 |
| Msa0745870 | MtrunA17_Chr7g0241761 | 46.087 | 115 | 48 | 3 | 264 | 376 | 142 | 244 | 2.11e-21 | 94.4 |
| Msa0745870 | MtrunA17_Chr5g0436501 | 62.687 | 67 | 24 | 1 | 264 | 330 | 127 | 192 | 7.34e-21 | 92.0 |
| Msa0745870 | MtrunA17_Chr5g0409941 | 49.167 | 120 | 23 | 4 | 1 | 114 | 19 | 106 | 1.36e-20 | 86.7 |
| Msa0745870 | MtrunA17_Chr8g0365011 | 46.226 | 106 | 44 | 2 | 244 | 337 | 74 | 178 | 4.86e-20 | 90.1 |
| Msa0745870 | MtrunA17_Chr4g0062741 | 52.703 | 74 | 31 | 2 | 264 | 336 | 140 | 210 | 6.22e-20 | 90.1 |
| Msa0745870 | MtrunA17_Chr3g0135671 | 48.571 | 70 | 36 | 0 | 264 | 333 | 93 | 162 | 2.58e-18 | 84.0 |
| Msa0745870 | MtrunA17_Chr8g0364731 | 55.224 | 67 | 29 | 1 | 271 | 337 | 10 | 75 | 7.70e-18 | 81.3 |
| Msa0745870 | MtrunA17_Chr2g0331031 | 53.846 | 65 | 27 | 1 | 264 | 328 | 111 | 172 | 8.39e-18 | 84.7 |
| Msa0745870 | MtrunA17_Chr4g0055931 | 38.983 | 118 | 55 | 4 | 222 | 328 | 47 | 158 | 2.23e-17 | 82.8 |
| Msa0745870 | MtrunA17_Chr5g0432921 | 40.833 | 120 | 60 | 3 | 219 | 334 | 72 | 184 | 4.25e-17 | 80.1 |
| Msa0745870 | MtrunA17_Chr6g0488471 | 52.308 | 65 | 28 | 1 | 264 | 328 | 99 | 160 | 4.16e-16 | 78.6 |
| Msa0745870 | MtrunA17_Chr8g0389241 | 65.217 | 46 | 16 | 0 | 264 | 309 | 107 | 152 | 4.80e-16 | 78.2 |
| Msa0745870 | MtrunA17_Chr5g0415191 | 67.391 | 46 | 15 | 0 | 264 | 309 | 104 | 149 | 5.93e-16 | 78.6 |
| Msa0745870 | MtrunA17_Chr4g0059701 | 68.889 | 45 | 14 | 0 | 264 | 308 | 86 | 130 | 6.42e-16 | 78.2 |
| Msa0745870 | MtrunA17_Chr5g0432941 | 38.889 | 108 | 56 | 2 | 236 | 334 | 78 | 184 | 1.34e-15 | 75.9 |
| Msa0745870 | MtrunA17_Chr1g0192061 | 38.095 | 126 | 57 | 6 | 230 | 337 | 13 | 135 | 2.45e-15 | 74.3 |
| Msa0745870 | MtrunA17_Chr6g0452791 | 54.545 | 55 | 25 | 0 | 264 | 318 | 82 | 136 | 5.43e-15 | 72.8 |
| Msa0745870 | MtrunA17_Chr3g0092621 | 42.308 | 78 | 39 | 2 | 259 | 333 | 78 | 152 | 1.68e-14 | 71.6 |
| Msa0745870 | MtrunA17_Chr3g0113121 | 46.667 | 90 | 40 | 3 | 263 | 344 | 96 | 185 | 1.29e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745870 | AT5G58900.1 | 41.176 | 136 | 64 | 3 | 264 | 394 | 143 | 267 | 6.20e-23 | 99.0 |
| Msa0745870 | AT5G08520.1 | 56.579 | 76 | 30 | 1 | 264 | 339 | 120 | 192 | 3.38e-22 | 97.1 |
| Msa0745870 | AT5G04760.1 | 64.179 | 67 | 21 | 1 | 264 | 330 | 101 | 164 | 3.62e-22 | 94.7 |
| Msa0745870 | AT5G01200.1 | 61.429 | 70 | 23 | 2 | 264 | 332 | 148 | 214 | 4.03e-21 | 93.2 |
| Msa0745870 | AT2G38090.1 | 58.108 | 74 | 27 | 2 | 264 | 336 | 143 | 213 | 3.41e-20 | 91.3 |
| Msa0745870 | AT1G49010.1 | 53.247 | 77 | 32 | 2 | 264 | 339 | 136 | 209 | 5.01e-20 | 90.9 |
| Msa0745870 | AT5G61620.1 | 44.444 | 117 | 46 | 4 | 264 | 373 | 110 | 214 | 1.74e-18 | 86.7 |
| Msa0745870 | AT3G11280.2 | 50.000 | 92 | 37 | 3 | 264 | 351 | 129 | 215 | 2.52e-18 | 85.1 |
| Msa0745870 | AT3G11280.1 | 50.000 | 92 | 37 | 3 | 264 | 351 | 129 | 215 | 2.52e-18 | 85.1 |
| Msa0745870 | AT5G23650.1 | 52.632 | 76 | 33 | 1 | 264 | 339 | 122 | 194 | 2.60e-18 | 86.3 |
| Msa0745870 | AT3G10580.2 | 43.636 | 110 | 51 | 4 | 264 | 370 | 97 | 198 | 4.56e-18 | 84.0 |
| Msa0745870 | AT3G10580.1 | 40.000 | 130 | 60 | 5 | 251 | 370 | 77 | 198 | 6.37e-18 | 84.3 |
| Msa0745870 | AT5G47390.1 | 46.591 | 88 | 41 | 3 | 264 | 349 | 98 | 181 | 2.48e-17 | 83.6 |
| Msa0745870 | AT5G05790.2 | 54.667 | 75 | 27 | 2 | 264 | 334 | 133 | 204 | 2.51e-17 | 82.4 |
| Msa0745870 | AT5G05790.1 | 54.667 | 75 | 27 | 2 | 264 | 334 | 133 | 204 | 2.51e-17 | 82.4 |
| Msa0745870 | AT1G70000.1 | 56.667 | 60 | 19 | 1 | 257 | 309 | 86 | 145 | 1.71e-16 | 79.7 |
| Msa0745870 | AT1G70000.2 | 56.667 | 60 | 19 | 1 | 257 | 309 | 86 | 145 | 1.71e-16 | 79.7 |
| Msa0745870 | AT5G56840.1 | 55.172 | 58 | 26 | 0 | 264 | 321 | 93 | 150 | 2.59e-16 | 78.6 |
| Msa0745870 | AT4G09450.1 | 54.412 | 68 | 28 | 1 | 264 | 331 | 93 | 157 | 3.55e-16 | 77.4 |
| Msa0745870 | AT3G16350.1 | 65.217 | 46 | 16 | 0 | 264 | 309 | 139 | 184 | 1.13e-15 | 79.0 |
| Msa0745870 | AT1G74840.2 | 68.889 | 45 | 14 | 0 | 264 | 308 | 98 | 142 | 1.93e-15 | 76.3 |
| Msa0745870 | AT1G74840.1 | 68.889 | 45 | 14 | 0 | 264 | 308 | 98 | 142 | 2.69e-15 | 76.3 |
| Msa0745870 | AT1G19000.2 | 68.889 | 45 | 14 | 0 | 264 | 308 | 104 | 148 | 3.21e-15 | 76.3 |
| Msa0745870 | AT1G19000.1 | 68.889 | 45 | 14 | 0 | 264 | 308 | 104 | 148 | 3.21e-15 | 76.3 |
| Msa0745870 | AT3G10590.1 | 50.000 | 68 | 30 | 2 | 264 | 331 | 113 | 176 | 1.57e-12 | 67.0 |
Find 111 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCATATCTTTCACATTT+TGG | 0.099316 | 5_1:+67720624 | None:intergenic |
| TCACCTTGTTCTTGGATATT+TGG | 0.151843 | 5_1:+67721933 | None:intergenic |
| TCAACATGATTCATAGGTTT+TGG | 0.219569 | 5_1:+67722624 | None:intergenic |
| CCTGCTGCTGCCGGGGATAC+AGG | 0.250754 | 5_1:+67722059 | None:intergenic |
| CCTGGGGCATGACTTTCTTC+TGG | 0.281577 | 5_1:+67721014 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5_1:+67720239 | None:intergenic |
| TGTTGAGAATGTTTCTGTTC+AGG | 0.297487 | 5_1:-67722607 | Msa0745870:intron |
| TCACATGGTCACCTTGTTCT+TGG | 0.300281 | 5_1:+67721925 | None:intergenic |
| TCTGTCCAATGCCCTTTCCC+TGG | 0.314361 | 5_1:+67720996 | None:intergenic |
| CTGAACATGTTTGGCATCAT+TGG | 0.316454 | 5_1:+67722010 | None:intergenic |
| TGGATATTTGGCCTTCCATT+TGG | 0.317326 | 5_1:+67721945 | None:intergenic |
| CTGTCCAATGCCCTTTCCCT+GGG | 0.317893 | 5_1:+67720997 | None:intergenic |
| TATTTGAAGAAAAGTAATTA+TGG | 0.325126 | 5_1:-67722757 | None:intergenic |
| CCACCAAAATGTGAAAGATA+TGG | 0.352224 | 5_1:-67720627 | Msa0745870:CDS |
| TGAGAAGATGCGCAGCTTGT+TGG | 0.358077 | 5_1:-67720222 | Msa0745870:CDS |
| CACCGGAGGCTGAACATGTT+TGG | 0.362724 | 5_1:+67722001 | None:intergenic |
| ACATTCTCAACATGATTCAT+AGG | 0.366509 | 5_1:+67722618 | None:intergenic |
| TTGGATAAAGCAACACCAAC+TGG | 0.371101 | 5_1:+67720276 | None:intergenic |
| GATGTTCCTGTGTTGGTTGT+TGG | 0.372353 | 5_1:-67722684 | Msa0745870:CDS |
| AAACAGAAATCAAACGGTTC+TGG | 0.380690 | 5_1:-67722215 | Msa0745870:intron |
| TTTCTGTTGCGCTTGGGGCC+TGG | 0.382290 | 5_1:+67722146 | None:intergenic |
| TGCTATGCTCAGAGGGATCT+TGG | 0.382368 | 5_1:+67721171 | None:intergenic |
| AACCTTGTCCTGCTGCTGCC+GGG | 0.402092 | 5_1:+67722051 | None:intergenic |
| TTTGTGTTTCTGTTGCGCTT+GGG | 0.412088 | 5_1:+67722140 | None:intergenic |
| AAATATTTCAAAAGAATTTG+TGG | 0.425853 | 5_1:-67720699 | Msa0745870:CDS |
| ATTTGTGTTTCTGTTGCGCT+TGG | 0.430827 | 5_1:+67722139 | None:intergenic |
| TCCTTTAGTCACTGCTCCTA+TGG | 0.430956 | 5_1:-67720369 | Msa0745870:CDS |
| GGATTCTCGCCATTAGGATA+AGG | 0.435944 | 5_1:+67722086 | None:intergenic |
| TATGCTGTTAATTATCCAAA+TGG | 0.436533 | 5_1:-67721960 | Msa0745870:CDS |
| GGCTTAGGATTCTCGCCATT+AGG | 0.439906 | 5_1:+67722080 | None:intergenic |
| TGTGAAAGATATGGAGAAGA+AGG | 0.441203 | 5_1:-67720618 | Msa0745870:CDS |
| GAACAACAACAGGAGAAAAC+TGG | 0.441684 | 5_1:-67721146 | Msa0745870:CDS |
| AATCGGTTCTACAATTCCTT+CGG | 0.444800 | 5_1:-67720414 | Msa0745870:CDS |
| GGTGATGGCATCTTATTCTT+CGG | 0.445274 | 5_1:+67722182 | None:intergenic |
| ATTGTTCTTGTTGTTTAAGA+TGG | 0.446908 | 5_1:+67720313 | None:intergenic |
| AAACCTTGTCCTGCTGCTGC+CGG | 0.447814 | 5_1:+67722050 | None:intergenic |
| ACCACCCGACTCAATGATAT+CGG | 0.449690 | 5_1:+67721121 | None:intergenic |
| ATGTTTGCCCTGGCAGGAAA+AGG | 0.462283 | 5_1:+67721879 | None:intergenic |
| GCGACGATGCCTTATCCTAA+TGG | 0.462440 | 5_1:-67722095 | Msa0745870:CDS |
| TTGGTGTTGCTTTATCCAAT+CGG | 0.462526 | 5_1:-67720272 | Msa0745870:CDS |
| CCTGTATCCCCGGCAGCAGC+AGG | 0.464792 | 5_1:-67722059 | Msa0745870:CDS |
| GGCTTTCGATAGCGCGGTGA+TGG | 0.464836 | 5_1:+67722167 | None:intergenic |
| ATGCCCCAGGGAAAGGGCAT+TGG | 0.473083 | 5_1:-67721001 | Msa0745870:CDS |
| GCTCATTTAAATCAATTTGA+AGG | 0.475975 | 5_1:+67721204 | None:intergenic |
| TCAAATTGATTTAAATGAGC+CGG | 0.477484 | 5_1:-67721201 | Msa0745870:CDS |
| TTGTGTTTCTGTTGCGCTTG+GGG | 0.482706 | 5_1:+67722141 | None:intergenic |
| GAAAGTCATGCCCCAGGGAA+AGG | 0.483047 | 5_1:-67721008 | Msa0745870:CDS |
| GCATAGCATGGAACAACAAC+AGG | 0.485938 | 5_1:-67721156 | Msa0745870:CDS |
| TCACCGCGCTATCGAAAGCC+AGG | 0.491564 | 5_1:-67722164 | Msa0745870:CDS |
| GCTGCCGGGGATACAGGCTT+AGG | 0.492601 | 5_1:+67722065 | None:intergenic |
| AAAGTCATGCCCCAGGGAAA+GGG | 0.493395 | 5_1:-67721007 | Msa0745870:CDS |
| ATAGGCATGTTTGCCCTGGC+AGG | 0.493753 | 5_1:+67721873 | None:intergenic |
| GAATCCTAAGCCTGTATCCC+CGG | 0.504373 | 5_1:-67722069 | Msa0745870:CDS |
| TGCCAAACATGTTCAGCCTC+CGG | 0.513848 | 5_1:-67722003 | Msa0745870:CDS |
| TAATTAACAGCATAAGCATT+CGG | 0.516489 | 5_1:+67721969 | None:intergenic |
| ATGTTGTGCTTGCTGCCAAT+CGG | 0.523993 | 5_1:-67720431 | Msa0745870:CDS |
| GCATGGCTAGCAATTTGAGT+TGG | 0.525594 | 5_1:+67720665 | None:intergenic |
| AGAAAGAGCTGGCCAAGACT+TGG | 0.525727 | 5_1:+67722659 | None:intergenic |
| GTGATTAAACAGAAATCAAA+CGG | 0.527832 | 5_1:-67722221 | Msa0745870:intron |
| GTAATTATGGTGAGGATCAG+AGG | 0.529504 | 5_1:-67722744 | Msa0745870:CDS |
| GTCTCATGTTGTTGTTCCAT+AGG | 0.529730 | 5_1:+67720353 | None:intergenic |
| TTGCATAGGCATGTTTGCCC+TGG | 0.530471 | 5_1:+67721869 | None:intergenic |
| GGCACCGATATCATTGAGTC+GGG | 0.531762 | 5_1:-67721125 | Msa0745870:CDS |
| CAAGGTGACCATGTGAATCA+TGG | 0.533701 | 5_1:-67721918 | Msa0745870:CDS |
| TGTTCCATGCTATGCTCAGA+GGG | 0.536332 | 5_1:+67721164 | None:intergenic |
| ATTAGAGTTTAGAATTGCAA+TGG | 0.542743 | 5_1:+67721097 | None:intergenic |
| GTCTGTTGCATTCCTTGAGG+AGG | 0.550846 | 5_1:+67720482 | None:intergenic |
| TGGTTGTTGGAACCAAGTCT+TGG | 0.553347 | 5_1:-67722671 | Msa0745870:CDS |
| TTTAAGATGGCAGTGTCTTG+AGG | 0.553601 | 5_1:+67720326 | None:intergenic |
| GGATAAGGCATCGTCGCCAC+AGG | 0.553867 | 5_1:+67722101 | None:intergenic |
| ATTTAAATCAATTTGAAGGA+GGG | 0.554059 | 5_1:+67721208 | None:intergenic |
| TCCATAGGAGCAGTGACTAA+AGG | 0.557140 | 5_1:+67720368 | None:intergenic |
| TTCGGATCTCCTTGCACCGG+AGG | 0.558249 | 5_1:+67721987 | None:intergenic |
| CATGTTCAGCCTCCGGTGCA+AGG | 0.562364 | 5_1:-67721996 | Msa0745870:CDS |
| CCAGAAGAAAGTCATGCCCC+AGG | 0.563168 | 5_1:-67721014 | Msa0745870:CDS |
| TTGGCATCATTGGCATGAGC+AGG | 0.563369 | 5_1:+67722020 | None:intergenic |
| ACCTTGTCCTGCTGCTGCCG+GGG | 0.566255 | 5_1:+67722052 | None:intergenic |
| TTGTTCCATGCTATGCTCAG+AGG | 0.567759 | 5_1:+67721163 | None:intergenic |
| GAGGGATCTTGGACTGAAGC+CGG | 0.570243 | 5_1:+67721182 | None:intergenic |
| CATTTAAATCAATTTGAAGG+AGG | 0.570848 | 5_1:+67721207 | None:intergenic |
| TCCCCGGCAGCAGCAGGACA+AGG | 0.572616 | 5_1:-67722053 | Msa0745870:CDS |
| TCAGGAAGTGTAGAACCGAT+TGG | 0.577352 | 5_1:+67720257 | None:intergenic |
| AAGTGTTGATGTTCCTGTGT+TGG | 0.580284 | 5_1:-67722691 | Msa0745870:CDS |
| GCATCATTGGCATGAGCAGG+TGG | 0.581815 | 5_1:+67722023 | None:intergenic |
| TGGCACCGATATCATTGAGT+CGG | 0.583638 | 5_1:-67721126 | Msa0745870:CDS |
| GAAGAAAAGTAATTATGGTG+AGG | 0.586984 | 5_1:-67722752 | None:intergenic |
| ACACTTTGTAGCTCAACTGA+AGG | 0.589388 | 5_1:+67720509 | None:intergenic |
| AGATCCCTCTGAGCATAGCA+TGG | 0.596307 | 5_1:-67721168 | Msa0745870:CDS |
| TGGATAAAGCAACACCAACT+GGG | 0.597123 | 5_1:+67720277 | None:intergenic |
| GTTTGAGCATGAGAAAGAGC+TGG | 0.597278 | 5_1:+67722648 | None:intergenic |
| CTGTTAATTATCCAAATGGA+AGG | 0.601168 | 5_1:-67721956 | Msa0745870:CDS |
| GAAGGAATTGTAGAACCGAT+TGG | 0.605792 | 5_1:+67720416 | None:intergenic |
| ATTAAACAAGAATGACACAT+TGG | 0.608999 | 5_1:-67720564 | Msa0745870:CDS |
| ACCGATATCATTGAGTCGGG+TGG | 0.615037 | 5_1:-67721122 | Msa0745870:CDS |
| GCATTCGGATCTCCTTGCAC+CGG | 0.618195 | 5_1:+67721984 | None:intergenic |
| CAAAGTGTGATTCCTCCTCA+AGG | 0.618896 | 5_1:-67720494 | Msa0745870:CDS |
| ATCGTCGCCACAGGAAAGTG+AGG | 0.619216 | 5_1:+67722110 | None:intergenic |
| CAGAAGAAAGTCATGCCCCA+GGG | 0.635297 | 5_1:-67721013 | Msa0745870:CDS |
| TGTCCAATGCCCTTTCCCTG+GGG | 0.640539 | 5_1:+67720998 | None:intergenic |
| GTGACCATGTGAATCATGGT+CGG | 0.644274 | 5_1:-67721914 | Msa0745870:CDS |
| AAGATGGCAGTGTCTTGAGG+AGG | 0.644314 | 5_1:+67720329 | None:intergenic |
| AGGCCAAATATCCAAGAACA+AGG | 0.648452 | 5_1:-67721936 | Msa0745870:CDS |
| TGACAACTTGCAAACCCAGT+TGG | 0.648867 | 5_1:-67720291 | Msa0745870:CDS |
| GGGCCTGGCTTTCGATAGCG+CGG | 0.653594 | 5_1:+67722161 | None:intergenic |
| ATTATGGTGAGGATCAGAGG+AGG | 0.653905 | 5_1:-67722741 | Msa0745870:CDS |
| AGGGAAAGGGCATTGGACAG+AGG | 0.658250 | 5_1:-67720994 | Msa0745870:CDS |
| GGATCAGAGGAGGAAAGCAG+AGG | 0.659593 | 5_1:-67722731 | Msa0745870:CDS |
| TTGGTTCCAACAACCAACAC+AGG | 0.665985 | 5_1:+67722678 | None:intergenic |
| TGTGTCTGTTGCATTCCTTG+AGG | 0.673315 | 5_1:+67720479 | None:intergenic |
| TGACACGCCTCACTTTCCTG+TGG | 0.696402 | 5_1:-67722117 | Msa0745870:CDS |
| GATGCCGACCATGATTCACA+TGG | 0.766610 | 5_1:+67721910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTCTTATAGTTGTATTTT+TGG | - | chr5_1:67721686-67721705 | Msa0745870:intron | 15.0% |
| !! | AAAAAATAACTTTCAAACAT+AGG | + | chr5_1:67722025-67722044 | None:intergenic | 15.0% |
| !! | AAATATTTCAAAAGAATTTG+TGG | - | chr5_1:67722256-67722275 | Msa0745870:intron | 15.0% |
| !! | TGTTAAACTAAATGAATAAG+TGG | + | chr5_1:67721165-67721184 | None:intergenic | 20.0% |
| !! | TGAAAGTTAAGAAAATTACT+TGG | + | chr5_1:67721497-67721516 | None:intergenic | 20.0% |
| !!! | ATTTTCTTAACTTTCATGAT+TGG | - | chr5_1:67721501-67721520 | Msa0745870:intron | 20.0% |
| !! | TAATTCAAATTGGATGAAAT+TGG | - | chr5_1:67721658-67721677 | Msa0745870:intron | 20.0% |
| !! | ATTTAAATCAATTTGAAGGA+GGG | + | chr5_1:67721750-67721769 | None:intergenic | 20.0% |
| !!! | TATATATAGGTTGTTTTTGA+AGG | - | chr5_1:67722202-67722221 | Msa0745870:CDS | 20.0% |
| !!! | ATATATAGGTTGTTTTTGAA+GGG | - | chr5_1:67722203-67722222 | Msa0745870:CDS | 20.0% |
| ! | TTCTTATGCTTGCAATAATA+TGG | + | chr5_1:67720516-67720535 | None:intergenic | 25.0% |
| ! | TAAACAACGAGTGAAAAATA+TGG | - | chr5_1:67720579-67720598 | Msa0745870:CDS | 25.0% |
| ! | TTCTACAATATTCTTAACTC+TGG | - | chr5_1:67720665-67720684 | Msa0745870:CDS | 25.0% |
| ! | TCTACAATATTCTTAACTCT+GGG | - | chr5_1:67720666-67720685 | Msa0745870:CDS | 25.0% |
| ! | GTGATTAAACAGAAATCAAA+CGG | - | chr5_1:67720734-67720753 | Msa0745870:CDS | 25.0% |
| ! | TAATTAACAGCATAAGCATT+CGG | + | chr5_1:67720989-67721008 | None:intergenic | 25.0% |
| ! | TATGCTGTTAATTATCCAAA+TGG | - | chr5_1:67720995-67721014 | Msa0745870:CDS | 25.0% |
| ! | ATTATGATATCTTCTCGTTA+TGG | - | chr5_1:67721446-67721465 | Msa0745870:intron | 25.0% |
| !!! | AGGCATAATTGATTTGATTA+AGG | - | chr5_1:67721540-67721559 | Msa0745870:intron | 25.0% |
| !!! | CATGCATCATATTTTTTGAA+TGG | + | chr5_1:67721632-67721651 | None:intergenic | 25.0% |
| ! | TTCAAAAAATATGATGCATG+TGG | - | chr5_1:67721632-67721651 | Msa0745870:intron | 25.0% |
| ! | CATGTGGATATAATTCAAAT+TGG | - | chr5_1:67721648-67721667 | Msa0745870:intron | 25.0% |
| !!! | TATTTTTGGTATAGAAAGCA+TGG | - | chr5_1:67721700-67721719 | Msa0745870:intron | 25.0% |
| ! | CATTTAAATCAATTTGAAGG+AGG | + | chr5_1:67721751-67721770 | None:intergenic | 25.0% |
| ! | GCTCATTTAAATCAATTTGA+AGG | + | chr5_1:67721754-67721773 | None:intergenic | 25.0% |
| !! | TCAAATTGATTTAAATGAGC+CGG | - | chr5_1:67721754-67721773 | Msa0745870:intron | 25.0% |
| !! | ATTAGAGTTTAGAATTGCAA+TGG | + | chr5_1:67721861-67721880 | None:intergenic | 25.0% |
| ! | CACATTCATTCTCTATATAT+AGG | - | chr5_1:67722189-67722208 | Msa0745870:CDS | 25.0% |
| !!! | TATATAGGTTGTTTTTGAAG+GGG | - | chr5_1:67722204-67722223 | Msa0745870:CDS | 25.0% |
| !!! | TTGGTGGATAAAGTATTTTT+GGG | + | chr5_1:67722315-67722334 | None:intergenic | 25.0% |
| !!! | TTTGGTGGATAAAGTATTTT+TGG | + | chr5_1:67722316-67722335 | None:intergenic | 25.0% |
| ! | ATTAAACAAGAATGACACAT+TGG | - | chr5_1:67722391-67722410 | Msa0745870:intron | 25.0% |
| !!! | ATTGTTCTTGTTGTTTAAGA+TGG | + | chr5_1:67722645-67722664 | None:intergenic | 25.0% |
| ! | TCAACATGATTCATAGGTTT+TGG | + | chr5_1:67720334-67720353 | None:intergenic | 30.0% |
| ACATTCTCAACATGATTCAT+AGG | + | chr5_1:67720340-67720359 | None:intergenic | 30.0% | |
| !!! | ATTGTTTTTTTTCCCTTCGA+TGG | - | chr5_1:67720628-67720647 | Msa0745870:CDS | 30.0% |
| TTTAATCACAGATCCATACA+CGG | + | chr5_1:67720723-67720742 | None:intergenic | 30.0% | |
| CTGTTAATTATCCAAATGGA+AGG | - | chr5_1:67720999-67721018 | Msa0745870:CDS | 30.0% | |
| ! | GAAATTTTACTGTGTTGCAT+AGG | + | chr5_1:67721103-67721122 | None:intergenic | 30.0% |
| AATTGCATGAAGTGCATATA+TGG | + | chr5_1:67721140-67721159 | None:intergenic | 30.0% | |
| ACTCAATGAAGTTCATTCAA+AGG | + | chr5_1:67721205-67721224 | None:intergenic | 30.0% | |
| TTACTTTGATACCATTGAAG+TGG | - | chr5_1:67721377-67721396 | Msa0745870:intron | 30.0% | |
| !!! | GCATCATTTTTTGAGTAAAC+CGG | - | chr5_1:67721562-67721581 | Msa0745870:intron | 30.0% |
| !!! | CATCATTTTTTGAGTAAACC+GGG | - | chr5_1:67721563-67721582 | Msa0745870:intron | 30.0% |
| ! | TCTCCATATCTTTCACATTT+TGG | + | chr5_1:67722334-67722353 | None:intergenic | 30.0% |
| AGAAGGAGAAAAAGAGAAAA+AGG | - | chr5_1:67722354-67722373 | Msa0745870:intron | 30.0% | |
| ! | TTCTCAAGTTTGTTCATATC+AGG | + | chr5_1:67722719-67722738 | None:intergenic | 30.0% |
| ! | TGTTGAGAATGTTTCTGTTC+AGG | - | chr5_1:67720348-67720367 | Msa0745870:CDS | 35.0% |
| !! | CAGCTTTTATTTCCATCGAA+GGG | + | chr5_1:67720643-67720662 | None:intergenic | 35.0% |
| !! | ACAGCTTTTATTTCCATCGA+AGG | + | chr5_1:67720644-67720663 | None:intergenic | 35.0% |
| AAACAGAAATCAAACGGTTC+TGG | - | chr5_1:67720740-67720759 | Msa0745870:CDS | 35.0% | |
| TCACCTTGTTCTTGGATATT+TGG | + | chr5_1:67721025-67721044 | None:intergenic | 35.0% | |
| ! | TCTCGTTATGGTTCTGTAAT+TGG | - | chr5_1:67721458-67721477 | Msa0745870:intron | 35.0% |
| !! | CTGTAATTGGTTTGAGTAAC+TGG | - | chr5_1:67721471-67721490 | Msa0745870:intron | 35.0% |
| ! | TTGGCTAGTTCATCTGATTA+AGG | - | chr5_1:67721520-67721539 | Msa0745870:intron | 35.0% |
| TTGAAGGGGATGAAAAAACA+TGG | - | chr5_1:67722218-67722237 | Msa0745870:intron | 35.0% | |
| GGGATGAAAAAACATGGAAA+GGG | - | chr5_1:67722224-67722243 | Msa0745870:intron | 35.0% | |
| !!! | GGATAAAGTATTTTTGGGCA+TGG | + | chr5_1:67722310-67722329 | None:intergenic | 35.0% |
| ! | CCATATCTTTCACATTTTGG+TGG | + | chr5_1:67722331-67722350 | None:intergenic | 35.0% |
| CCACCAAAATGTGAAAGATA+TGG | - | chr5_1:67722328-67722347 | Msa0745870:intron | 35.0% | |
| TGTGAAAGATATGGAGAAGA+AGG | - | chr5_1:67722337-67722356 | Msa0745870:intron | 35.0% | |
| ! | AATCGGTTCTACAATTCCTT+CGG | - | chr5_1:67722541-67722560 | Msa0745870:intron | 35.0% |
| !! | TTGGTGTTGCTTTATCCAAT+CGG | - | chr5_1:67722683-67722702 | Msa0745870:CDS | 35.0% |
| GTAATTATGGTGAGGATCAG+AGG | - | chr5_1:67720211-67720230 | Msa0745870:CDS | 40.0% | |
| !! | AAGTGTTGATGTTCCTGTGT+TGG | - | chr5_1:67720264-67720283 | Msa0745870:CDS | 40.0% |
| GCGAGTCAACAAATCTGTTT+AGG | - | chr5_1:67720601-67720620 | Msa0745870:CDS | 40.0% | |
| ! | TTTGCCTGATTTTCCGTGTA+TGG | - | chr5_1:67720707-67720726 | Msa0745870:CDS | 40.0% |
| AGATCCATACACGGAAAATC+AGG | + | chr5_1:67720714-67720733 | None:intergenic | 40.0% | |
| ! | GGTGATGGCATCTTATTCTT+CGG | + | chr5_1:67720776-67720795 | None:intergenic | 40.0% |
| ! | TTTGTGTTTCTGTTGCGCTT+GGG | + | chr5_1:67720818-67720837 | None:intergenic | 40.0% |
| ! | ATTTGTGTTTCTGTTGCGCT+TGG | + | chr5_1:67720819-67720838 | None:intergenic | 40.0% |
| CTGAACATGTTTGGCATCAT+TGG | + | chr5_1:67720948-67720967 | None:intergenic | 40.0% | |
| ! | TGGATATTTGGCCTTCCATT+TGG | + | chr5_1:67721013-67721032 | None:intergenic | 40.0% |
| AGGCCAAATATCCAAGAACA+AGG | - | chr5_1:67721019-67721038 | Msa0745870:CDS | 40.0% | |
| TGCATGAAGTGCATATATGG+AGG | + | chr5_1:67721137-67721156 | None:intergenic | 40.0% | |
| !! | AAGATTCTAGCTTAACCCTC+TGG | - | chr5_1:67721295-67721314 | Msa0745870:intron | 40.0% |
| !!! | TTAACCCTCTGGTGCTTTTT+TGG | - | chr5_1:67721306-67721325 | Msa0745870:intron | 40.0% |
| !!! | TAACCCTCTGGTGCTTTTTT+GGG | - | chr5_1:67721307-67721326 | Msa0745870:intron | 40.0% |
| !! | ATACCCAAAAAAGCACCAGA+GGG | + | chr5_1:67721313-67721332 | None:intergenic | 40.0% |
| !! | AATACCCAAAAAAGCACCAG+AGG | + | chr5_1:67721314-67721333 | None:intergenic | 40.0% |
| GCAACTAAAAGCCACTTCAA+TGG | + | chr5_1:67721391-67721410 | None:intergenic | 40.0% | |
| GAACAACAACAGGAGAAAAC+TGG | - | chr5_1:67721809-67721828 | Msa0745870:intron | 40.0% | |
| GGGGATGAAAAAACATGGAA+AGG | - | chr5_1:67722223-67722242 | Msa0745870:intron | 40.0% | |
| ACACTTTGTAGCTCAACTGA+AGG | + | chr5_1:67722449-67722468 | None:intergenic | 40.0% | |
| GAAGGAATTGTAGAACCGAT+TGG | + | chr5_1:67722542-67722561 | None:intergenic | 40.0% | |
| ! | GTCTCATGTTGTTGTTCCAT+AGG | + | chr5_1:67722605-67722624 | None:intergenic | 40.0% |
| ! | TTTAAGATGGCAGTGTCTTG+AGG | + | chr5_1:67722632-67722651 | None:intergenic | 40.0% |
| TGGATAAAGCAACACCAACT+GGG | + | chr5_1:67722681-67722700 | None:intergenic | 40.0% | |
| TTGGATAAAGCAACACCAAC+TGG | + | chr5_1:67722682-67722701 | None:intergenic | 40.0% | |
| ATTATGGTGAGGATCAGAGG+AGG | - | chr5_1:67720214-67720233 | Msa0745870:CDS | 45.0% | |
| !! | GATGTTCCTGTGTTGGTTGT+TGG | - | chr5_1:67720271-67720290 | Msa0745870:CDS | 45.0% |
| TTGGTTCCAACAACCAACAC+AGG | + | chr5_1:67720280-67720299 | None:intergenic | 45.0% | |
| TGGTTGTTGGAACCAAGTCT+TGG | - | chr5_1:67720284-67720303 | Msa0745870:CDS | 45.0% | |
| GTTTGAGCATGAGAAAGAGC+TGG | + | chr5_1:67720310-67720329 | None:intergenic | 45.0% | |
| ! | TTGTGTTTCTGTTGCGCTTG+GGG | + | chr5_1:67720817-67720836 | None:intergenic | 45.0% |
| GGATTCTCGCCATTAGGATA+AGG | + | chr5_1:67720872-67720891 | None:intergenic | 45.0% | |
| TCACATGGTCACCTTGTTCT+TGG | + | chr5_1:67721033-67721052 | None:intergenic | 45.0% | |
| CAAGGTGACCATGTGAATCA+TGG | - | chr5_1:67721037-67721056 | Msa0745870:CDS | 45.0% | |
| GTGACCATGTGAATCATGGT+CGG | - | chr5_1:67721041-67721060 | Msa0745870:CDS | 45.0% | |
| ! | ATCAAAGACCTTTTCCTGCC+AGG | - | chr5_1:67721068-67721087 | Msa0745870:CDS | 45.0% |
| ! | TCAAAGACCTTTTCCTGCCA+GGG | - | chr5_1:67721069-67721088 | Msa0745870:CDS | 45.0% |
| TGTTCCATGCTATGCTCAGA+GGG | + | chr5_1:67721794-67721813 | None:intergenic | 45.0% | |
| TTGTTCCATGCTATGCTCAG+AGG | + | chr5_1:67721795-67721814 | None:intergenic | 45.0% | |
| GCATAGCATGGAACAACAAC+AGG | - | chr5_1:67721799-67721818 | Msa0745870:intron | 45.0% | |
| !! | TGGCACCGATATCATTGAGT+CGG | - | chr5_1:67721829-67721848 | Msa0745870:intron | 45.0% |
| ACCACCCGACTCAATGATAT+CGG | + | chr5_1:67721837-67721856 | None:intergenic | 45.0% | |
| AAAAACATGGAAAGGGACGC+TGG | - | chr5_1:67722231-67722250 | Msa0745870:intron | 45.0% | |
| GCATGGCTAGCAATTTGAGT+TGG | + | chr5_1:67722293-67722312 | None:intergenic | 45.0% | |
| CAAAGTGTGATTCCTCCTCA+AGG | - | chr5_1:67722461-67722480 | Msa0745870:intron | 45.0% | |
| TGTGTCTGTTGCATTCCTTG+AGG | + | chr5_1:67722479-67722498 | None:intergenic | 45.0% | |
| ! | ATGTTGTGCTTGCTGCCAAT+CGG | - | chr5_1:67722524-67722543 | Msa0745870:intron | 45.0% |
| !! | TCGTTTTGTTGCTCAACCGA+AGG | + | chr5_1:67722560-67722579 | None:intergenic | 45.0% |
| TCCTTTAGTCACTGCTCCTA+TGG | - | chr5_1:67722586-67722605 | Msa0745870:intron | 45.0% | |
| TCCATAGGAGCAGTGACTAA+AGG | + | chr5_1:67722590-67722609 | None:intergenic | 45.0% | |
| TGACAACTTGCAAACCCAGT+TGG | - | chr5_1:67722664-67722683 | Msa0745870:CDS | 45.0% | |
| ! | TCAGGAAGTGTAGAACCGAT+TGG | + | chr5_1:67722701-67722720 | None:intergenic | 45.0% |
| AGAAAGAGCTGGCCAAGACT+TGG | + | chr5_1:67720299-67720318 | None:intergenic | 50.0% | |
| GCGACGATGCCTTATCCTAA+TGG | - | chr5_1:67720860-67720879 | Msa0745870:intron | 50.0% | |
| GGCTTAGGATTCTCGCCATT+AGG | + | chr5_1:67720878-67720897 | None:intergenic | 50.0% | |
| GAATCCTAAGCCTGTATCCC+CGG | - | chr5_1:67720886-67720905 | Msa0745870:intron | 50.0% | |
| TTGGCATCATTGGCATGAGC+AGG | + | chr5_1:67720938-67720957 | None:intergenic | 50.0% | |
| TGCCAAACATGTTCAGCCTC+CGG | - | chr5_1:67720952-67720971 | Msa0745870:intron | 50.0% | |
| GATGCCGACCATGATTCACA+TGG | + | chr5_1:67721048-67721067 | None:intergenic | 50.0% | |
| ATGTTTGCCCTGGCAGGAAA+AGG | + | chr5_1:67721079-67721098 | None:intergenic | 50.0% | |
| TTGCATAGGCATGTTTGCCC+TGG | + | chr5_1:67721089-67721108 | None:intergenic | 50.0% | |
| TGAGTAAACCGGGTGATGCT+AGG | - | chr5_1:67721573-67721592 | Msa0745870:intron | 50.0% | |
| GAGTAAACCGGGTGATGCTA+GGG | - | chr5_1:67721574-67721593 | Msa0745870:intron | 50.0% | |
| TCTTAGTCCCTAGCATCACC+CGG | + | chr5_1:67721584-67721603 | None:intergenic | 50.0% | |
| TGCTATGCTCAGAGGGATCT+TGG | + | chr5_1:67721787-67721806 | None:intergenic | 50.0% | |
| AGATCCCTCTGAGCATAGCA+TGG | - | chr5_1:67721787-67721806 | Msa0745870:intron | 50.0% | |
| !! | GGCACCGATATCATTGAGTC+GGG | - | chr5_1:67721830-67721849 | Msa0745870:intron | 50.0% |
| ACCGATATCATTGAGTCGGG+TGG | - | chr5_1:67721833-67721852 | Msa0745870:intron | 50.0% | |
| CAGAAGAAAGTCATGCCCCA+GGG | - | chr5_1:67721942-67721961 | Msa0745870:CDS | 50.0% | |
| AAAGTCATGCCCCAGGGAAA+GGG | - | chr5_1:67721948-67721967 | Msa0745870:CDS | 50.0% | |
| GTCTGTTGCATTCCTTGAGG+AGG | + | chr5_1:67722476-67722495 | None:intergenic | 50.0% | |
| AAGATGGCAGTGTCTTGAGG+AGG | + | chr5_1:67722629-67722648 | None:intergenic | 50.0% | |
| TGAGAAGATGCGCAGCTTGT+TGG | - | chr5_1:67722733-67722752 | Msa0745870:CDS | 50.0% | |
| GGATCAGAGGAGGAAAGCAG+AGG | - | chr5_1:67720224-67720243 | Msa0745870:CDS | 55.0% | |
| TGACACGCCTCACTTTCCTG+TGG | - | chr5_1:67720838-67720857 | Msa0745870:intron | 55.0% | |
| ATCGTCGCCACAGGAAAGTG+AGG | + | chr5_1:67720848-67720867 | None:intergenic | 55.0% | |
| AAACCTTGTCCTGCTGCTGC+CGG | + | chr5_1:67720908-67720927 | None:intergenic | 55.0% | |
| GCATCATTGGCATGAGCAGG+TGG | + | chr5_1:67720935-67720954 | None:intergenic | 55.0% | |
| CACCGGAGGCTGAACATGTT+TGG | + | chr5_1:67720957-67720976 | None:intergenic | 55.0% | |
| GCATTCGGATCTCCTTGCAC+CGG | + | chr5_1:67720974-67720993 | None:intergenic | 55.0% | |
| ATAGGCATGTTTGCCCTGGC+AGG | + | chr5_1:67721085-67721104 | None:intergenic | 55.0% | |
| GAGGGATCTTGGACTGAAGC+CGG | + | chr5_1:67721776-67721795 | None:intergenic | 55.0% | |
| CCTGGGGCATGACTTTCTTC+TGG | + | chr5_1:67721944-67721963 | None:intergenic | 55.0% | |
| CCAGAAGAAAGTCATGCCCC+AGG | - | chr5_1:67721941-67721960 | Msa0745870:CDS | 55.0% | |
| GAAAGTCATGCCCCAGGGAA+AGG | - | chr5_1:67721947-67721966 | Msa0745870:CDS | 55.0% | |
| TGTCCAATGCCCTTTCCCTG+GGG | + | chr5_1:67721960-67721979 | None:intergenic | 55.0% | |
| CTGTCCAATGCCCTTTCCCT+GGG | + | chr5_1:67721961-67721980 | None:intergenic | 55.0% | |
| TCTGTCCAATGCCCTTTCCC+TGG | + | chr5_1:67721962-67721981 | None:intergenic | 55.0% | |
| !! | AGGGAAAGGGCATTGGACAG+AGG | - | chr5_1:67721961-67721980 | Msa0745870:CDS | 55.0% |
| GGCTTTCGATAGCGCGGTGA+TGG | + | chr5_1:67720791-67720810 | None:intergenic | 60.0% | |
| TCACCGCGCTATCGAAAGCC+AGG | - | chr5_1:67720791-67720810 | Msa0745870:intron | 60.0% | |
| TTTCTGTTGCGCTTGGGGCC+TGG | + | chr5_1:67720812-67720831 | None:intergenic | 60.0% | |
| !! | GGATAAGGCATCGTCGCCAC+AGG | + | chr5_1:67720857-67720876 | None:intergenic | 60.0% |
| AACCTTGTCCTGCTGCTGCC+GGG | + | chr5_1:67720907-67720926 | None:intergenic | 60.0% | |
| CATGTTCAGCCTCCGGTGCA+AGG | - | chr5_1:67720959-67720978 | Msa0745870:intron | 60.0% | |
| TTCGGATCTCCTTGCACCGG+AGG | + | chr5_1:67720971-67720990 | None:intergenic | 60.0% | |
| ! | ATGCCCCAGGGAAAGGGCAT+TGG | - | chr5_1:67721954-67721973 | Msa0745870:CDS | 60.0% |
| ! | GGGCCTGGCTTTCGATAGCG+CGG | + | chr5_1:67720797-67720816 | None:intergenic | 65.0% |
| GCTGCCGGGGATACAGGCTT+AGG | + | chr5_1:67720893-67720912 | None:intergenic | 65.0% | |
| ACCTTGTCCTGCTGCTGCCG+GGG | + | chr5_1:67720906-67720925 | None:intergenic | 65.0% | |
| CCTGCTGCTGCCGGGGATAC+AGG | + | chr5_1:67720899-67720918 | None:intergenic | 70.0% | |
| CCTGTATCCCCGGCAGCAGC+AGG | - | chr5_1:67720896-67720915 | Msa0745870:intron | 70.0% | |
| TCCCCGGCAGCAGCAGGACA+AGG | - | chr5_1:67720902-67720921 | Msa0745870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 67720208 | 67722769 | 67720208 | ID=Msa0745870;Name=Msa0745870 |
| chr5_1 | mRNA | 67720208 | 67722769 | 67720208 | ID=Msa0745870-mRNA-1;Parent=Msa0745870;Name=Msa0745870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|4|0|455 |
| chr5_1 | exon | 67722608 | 67722769 | 67722608 | ID=Msa0745870-mRNA-1:exon:20205;Parent=Msa0745870-mRNA-1 |
| chr5_1 | exon | 67721865 | 67722231 | 67721865 | ID=Msa0745870-mRNA-1:exon:20204;Parent=Msa0745870-mRNA-1 |
| chr5_1 | exon | 67720984 | 67721263 | 67720984 | ID=Msa0745870-mRNA-1:exon:20203;Parent=Msa0745870-mRNA-1 |
| chr5_1 | exon | 67720208 | 67720766 | 67720208 | ID=Msa0745870-mRNA-1:exon:20202;Parent=Msa0745870-mRNA-1 |
| chr5_1 | CDS | 67722608 | 67722769 | 67722608 | ID=Msa0745870-mRNA-1:cds;Parent=Msa0745870-mRNA-1 |
| chr5_1 | CDS | 67721865 | 67722231 | 67721865 | ID=Msa0745870-mRNA-1:cds;Parent=Msa0745870-mRNA-1 |
| chr5_1 | CDS | 67720984 | 67721263 | 67720984 | ID=Msa0745870-mRNA-1:cds;Parent=Msa0745870-mRNA-1 |
| chr5_1 | CDS | 67720208 | 67720766 | 67720208 | ID=Msa0745870-mRNA-1:cds;Parent=Msa0745870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
