AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0745950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745950 MtrunA17_Chr5g0441141 73.196 291 28 8 7 272 10 275 5.38e-136 384
Msa0745950 MtrunA17_Chr5g0440761 73.214 280 31 7 7 267 10 264 5.33e-133 377
Msa0745950 MtrunA17_Chr5g0440781 87.778 180 14 1 7 178 10 189 5.36e-112 320
Msa0745950 MtrunA17_Chr5g0441131 69.149 188 45 3 1 178 1 185 1.40e-80 241
Msa0745950 MtrunA17_Chr5g0425591 91.398 93 8 0 1 93 1 93 4.40e-58 180
Msa0745950 MtrunA17_Chr1g0192411 42.929 198 87 6 1 173 1 197 6.97e-41 145
Msa0745950 MtrunA17_Chr1g0154031 42.763 152 80 2 10 155 77 227 1.02e-38 140
Msa0745950 MtrunA17_Chr1g0151941 41.209 182 99 5 9 186 12 189 9.47e-38 133
Msa0745950 MtrunA17_Chr3g0099131 51.695 118 56 1 7 124 39 155 1.17e-37 139
Msa0745950 MtrunA17_Chr2g0322521 52.101 119 56 1 10 128 30 147 6.77e-37 134
Msa0745950 MtrunA17_Chr4g0072451 47.486 179 38 6 4 172 2 134 1.02e-36 127
Msa0745950 MtrunA17_Chr4g0037141 48.462 130 63 3 7 135 10 136 4.93e-36 130
Msa0745950 MtrunA17_Chr3g0103281 50.000 118 57 2 8 124 11 127 7.14e-36 130
Msa0745950 MtrunA17_Chr8g0354661 44.853 136 67 2 10 138 38 172 1.03e-35 134
Msa0745950 MtrunA17_Chr3g0080861 39.490 157 88 3 10 160 38 193 1.75e-35 132
Msa0745950 MtrunA17_Chr5g0410961 50.413 121 58 2 9 128 12 131 2.22e-35 129
Msa0745950 MtrunA17_Chr2g0323411 52.212 113 52 2 10 121 13 124 9.15e-35 127
Msa0745950 MtrunA17_Chr7g0228231 49.138 116 58 1 2 117 7 121 9.21e-35 124
Msa0745950 MtrunA17_Chr5g0395281 39.000 200 106 6 3 191 6 200 1.09e-34 127
Msa0745950 MtrunA17_Chr7g0274581 50.467 107 51 2 10 115 13 118 1.46e-34 124
Msa0745950 MtrunA17_Chr3g0131121 44.295 149 75 3 9 150 12 159 1.58e-34 126
Msa0745950 MtrunA17_Chr4g0048511 51.786 112 52 2 10 120 14 124 2.00e-34 127
Msa0745950 MtrunA17_Chr8g0385321 53.097 113 51 2 9 120 12 123 2.47e-34 126
Msa0745950 MtrunA17_Chr4g0022881 48.305 118 60 1 9 126 12 128 2.68e-34 124
Msa0745950 MtrunA17_Chr1g0167691 51.456 103 49 1 10 112 13 114 3.00e-34 124
Msa0745950 MtrunA17_Chr2g0281071 52.679 112 51 2 10 120 14 124 3.44e-34 126
Msa0745950 MtrunA17_Chr2g0328771 39.674 184 104 5 10 192 21 198 3.48e-34 125
Msa0745950 MtrunA17_Chr1g0187761 51.456 103 49 1 10 112 13 114 3.94e-34 124
Msa0745950 MtrunA17_Chr1g0203411 43.200 125 70 1 9 133 12 135 4.71e-34 125
Msa0745950 MtrunA17_Chr6g0450101 49.550 111 55 1 2 112 7 116 1.51e-33 121
Msa0745950 MtrunA17_Chr4g0032401 42.361 144 76 3 10 147 18 160 1.74e-33 124
Msa0745950 MtrunA17_Chr3g0115821 47.500 120 61 2 10 128 13 131 2.15e-33 124
Msa0745950 MtrunA17_Chr4g0039971 49.138 116 57 2 10 124 14 128 2.60e-33 124
Msa0745950 MtrunA17_Chr1g0167661 49.558 113 54 2 10 120 13 124 3.38e-33 121
Msa0745950 MtrunA17_Chr1g0211161 47.581 124 63 2 2 124 6 128 4.44e-33 120
Msa0745950 MtrunA17_Chr4g0058631 42.254 142 80 2 10 150 13 153 4.64e-33 124
Msa0745950 MtrunA17_Chr3g0117091 50.000 116 56 2 10 124 13 127 5.01e-33 123
Msa0745950 MtrunA17_Chr2g0309911 47.863 117 59 2 5 120 7 122 6.50e-33 122
Msa0745950 MtrunA17_Chr1g0193801 43.165 139 77 2 10 147 13 150 7.12e-33 124
Msa0745950 MtrunA17_Chr5g0435101 38.710 155 93 2 8 161 10 163 8.43e-33 119
Msa0745950 MtrunA17_Chr7g0270891 43.919 148 72 4 10 147 13 159 1.20e-32 122
Msa0745950 MtrunA17_Chr1g0193371 49.107 112 55 2 10 120 13 123 1.42e-32 122
Msa0745950 MtrunA17_Chr1g0152011 54.206 107 47 2 7 112 10 115 1.49e-32 122
Msa0745950 MtrunA17_Chr4g0022901 43.885 139 66 4 1 135 1 131 1.50e-32 120
Msa0745950 MtrunA17_Chr6g0453471 46.032 126 66 2 10 134 13 137 1.87e-32 122
Msa0745950 MtrunA17_Chr6g0452271 47.059 119 61 2 7 124 10 127 2.37e-32 121
Msa0745950 MtrunA17_Chr4g0044421 46.491 114 59 2 8 120 11 123 3.38e-32 117
Msa0745950 MtrunA17_Chr2g0323351 50.485 103 50 1 10 112 13 114 3.57e-32 119
Msa0745950 MtrunA17_Chr5g0400821 53.271 107 48 2 7 112 10 115 4.57e-32 120
Msa0745950 MtrunA17_Chr7g0217741 47.414 116 59 2 10 124 13 127 5.12e-32 120
Msa0745950 MtrunA17_Chr5g0434571 41.104 163 90 4 10 169 49 208 5.87e-32 120
Msa0745950 MtrunA17_Chr4g0022931 42.222 135 72 3 1 130 1 134 7.29e-32 118
Msa0745950 MtrunA17_Chr7g0228891 48.276 116 58 2 10 124 13 127 8.71e-32 118
Msa0745950 MtrunA17_Chr4g0054391 54.902 102 44 2 7 107 10 110 1.53e-31 118
Msa0745950 MtrunA17_Chr4g0042671 44.776 134 70 3 10 140 13 145 1.60e-31 120
Msa0745950 MtrunA17_Chr2g0327351 54.369 103 45 2 7 108 10 111 1.94e-31 118
Msa0745950 MtrunA17_Chr3g0110351 45.669 127 67 2 10 135 13 138 2.12e-31 118
Msa0745950 MtrunA17_Chr8g0349261 48.673 113 55 3 10 120 14 125 2.38e-31 117
Msa0745950 MtrunA17_Chr8g0342521 45.833 120 63 2 2 120 5 123 2.42e-31 119
Msa0745950 MtrunA17_Chr3g0088461 50.485 103 50 1 10 112 23 124 2.67e-31 119
Msa0745950 MtrunA17_Chr1g0209661 44.954 109 59 1 8 116 26 133 2.72e-31 118
Msa0745950 MtrunA17_Chr3g0135311 51.402 107 50 2 7 112 10 115 2.95e-31 119
Msa0745950 MtrunA17_Chr2g0330041 45.833 120 63 2 2 120 5 123 4.00e-31 119
Msa0745950 MtrunA17_Chr4g0022911 42.222 135 67 4 10 141 14 140 5.39e-31 117
Msa0745950 MtrunA17_Chr8g0343831 46.903 113 58 2 5 116 4 115 7.27e-31 115
Msa0745950 MtrunA17_Chr1g0193901 65.957 94 31 1 2 94 4 97 7.40e-31 111
Msa0745950 MtrunA17_Chr1g0193891 65.957 94 31 1 2 94 4 97 7.40e-31 111
Msa0745950 MtrunA17_Chr1g0193871 65.957 94 31 1 2 94 4 97 7.40e-31 111
Msa0745950 MtrunA17_Chr1g0193881 65.957 94 31 1 2 94 4 97 7.40e-31 111
Msa0745950 MtrunA17_Chr8g0342541 45.946 111 59 1 2 112 5 114 9.28e-31 117
Msa0745950 MtrunA17_Chr7g0261281 47.573 103 53 1 10 112 13 114 9.49e-31 115
Msa0745950 MtrunA17_Chr5g0417821 46.721 122 63 2 4 124 2 122 1.09e-30 115
Msa0745950 MtrunA17_Chr4g0028311 51.402 107 50 2 7 112 10 115 1.23e-30 116
Msa0745950 MtrunA17_Chr7g0271241 53.061 98 45 1 10 107 13 109 1.26e-30 117
Msa0745950 MtrunA17_Chr1g0180391 46.847 111 58 1 2 112 12 121 2.04e-30 114
Msa0745950 MtrunA17_Chr4g0072751 52.427 103 47 2 7 108 10 111 2.24e-30 116
Msa0745950 MtrunA17_Chr4g0060721 48.598 107 53 2 10 115 14 119 2.25e-30 116
Msa0745950 MtrunA17_Chr7g0264641 49.533 107 52 2 7 112 10 115 2.76e-30 114
Msa0745950 MtrunA17_Chr4g0068061 48.544 103 52 1 10 112 13 114 3.39e-30 115
Msa0745950 MtrunA17_Chr4g0022891 44.860 107 58 1 9 115 12 117 4.73e-30 113
Msa0745950 MtrunA17_Chr1g0194301 45.794 107 57 1 10 116 34 139 4.87e-30 114
Msa0745950 MtrunA17_Chr5g0397231 46.729 107 56 1 2 108 5 110 9.05e-30 114
Msa0745950 MtrunA17_Chr4g0057031 48.246 114 57 2 9 121 12 124 1.02e-29 113
Msa0745950 MtrunA17_Chr1g0186061 47.170 106 55 1 10 115 21 125 1.05e-29 112
Msa0745950 MtrunA17_Chr7g0217221 48.148 108 54 2 9 115 12 118 1.11e-29 112
Msa0745950 MtrunA17_Chr3g0121241 42.149 121 68 2 5 124 38 157 1.19e-29 113
Msa0745950 MtrunA17_Chr8g0387421 44.828 116 62 2 2 116 5 119 1.34e-29 114
Msa0745950 MtrunA17_Chr3g0092401 39.161 143 70 2 9 151 13 138 1.41e-29 113
Msa0745950 MtrunA17_Chr6g0453751 60.000 90 28 1 10 91 21 110 1.47e-29 108
Msa0745950 MtrunA17_Chr6g0453211 48.000 100 51 1 9 108 12 110 1.54e-29 113
Msa0745950 MtrunA17_Chr7g0254411 42.857 140 71 4 10 146 13 146 1.57e-29 114
Msa0745950 MtrunA17_Chr1g0194291 45.370 108 58 1 9 116 21 127 1.97e-29 112
Msa0745950 MtrunA17_Chr1g0194951 44.538 119 62 3 10 127 13 128 3.32e-29 113
Msa0745950 MtrunA17_Chr4g0055981 45.918 98 52 1 11 108 57 153 4.40e-29 110
Msa0745950 MtrunA17_Chr8g0346561 46.226 106 56 1 11 116 14 118 5.55e-29 111
Msa0745950 MtrunA17_Chr4g0068921 46.296 108 57 1 8 115 23 129 1.56e-28 107
Msa0745950 MtrunA17_Chr4g0070641 46.939 98 51 1 11 108 14 110 1.59e-28 107
Msa0745950 MtrunA17_Chr7g0275911 44.231 104 57 1 5 108 8 110 1.88e-28 109
Msa0745950 MtrunA17_Chr4g0013361 42.466 146 78 4 10 151 11 154 3.27e-28 109
Msa0745950 MtrunA17_Chr2g0293911 43.966 116 64 1 1 116 16 130 3.31e-28 110
Msa0745950 MtrunA17_Chr6g0470971 46.729 107 56 1 10 116 15 120 4.55e-28 108
Msa0745950 MtrunA17_Chr1g0203441 44.954 109 59 1 10 118 14 121 4.59e-28 108
Msa0745950 MtrunA17_Chr4g0070611 46.939 98 51 1 11 108 14 110 5.47e-28 109
Msa0745950 MtrunA17_Chr8g0342481 44.643 112 60 2 2 112 5 115 5.69e-28 110
Msa0745950 MtrunA17_Chr2g0311221 48.544 103 52 1 7 109 12 113 5.71e-28 109
Msa0745950 MtrunA17_Chr8g0334881 46.296 108 56 2 9 115 10 116 6.23e-28 109
Msa0745950 MtrunA17_Chr1g0168661 42.857 112 60 2 10 121 22 129 6.35e-28 107
Msa0745950 MtrunA17_Chr6g0487491 32.836 201 111 6 7 198 10 195 1.06e-27 107
Msa0745950 MtrunA17_Chr7g0269831 52.525 99 46 1 10 108 13 110 1.50e-27 108
Msa0745950 MtrunA17_Chr5g0434931 44.231 104 57 1 9 112 35 137 1.54e-27 107
Msa0745950 MtrunA17_Chr8g0360111 43.269 104 58 1 5 108 21 123 2.13e-27 106
Msa0745950 MtrunA17_Chr5g0434911 41.964 112 64 1 1 112 13 123 3.14e-27 106
Msa0745950 MtrunA17_Chr7g0240821 39.706 136 72 3 13 147 5 131 1.04e-26 103
Msa0745950 MtrunA17_Chr3g0099141 54.118 85 38 1 7 91 38 121 2.07e-26 100
Msa0745950 MtrunA17_Chr7g0220341 30.418 263 170 10 1 255 17 274 2.33e-26 104
Msa0745950 MtrunA17_Chr5g0434841 44.660 103 56 1 10 112 21 122 1.39e-25 103
Msa0745950 MtrunA17_Chr3g0117511 44.737 114 59 3 11 122 183 294 2.36e-25 104
Msa0745950 MtrunA17_Chr7g0228991 42.308 104 59 1 9 112 29 131 2.75e-25 101
Msa0745950 MtrunA17_Chr5g0434831 43.689 103 57 1 10 112 8 109 3.35e-25 99.0
Msa0745950 MtrunA17_Chr2g0327821 42.857 105 59 1 8 112 5 108 3.81e-25 100
Msa0745950 MtrunA17_Chr7g0247131 51.852 81 37 2 41 120 10 89 4.56e-25 100
Msa0745950 MtrunA17_Chr5g0401731 49.057 106 51 3 8 112 12 115 9.29e-25 100
Msa0745950 MtrunA17_Chr4g0030881 40.164 122 62 3 9 120 7 127 1.23e-24 99.4
Msa0745950 MtrunA17_Chr3g0133601 35.227 176 90 5 8 167 34 201 1.68e-24 98.2
Msa0745950 MtrunA17_Chr6g0454921 48.515 101 48 3 8 107 12 109 5.23e-24 96.3
Msa0745950 MtrunA17_Chr4g0008551 46.789 109 51 4 11 118 38 140 1.49e-23 98.2
Msa0745950 MtrunA17_Chr4g0058991 45.631 103 52 3 11 112 209 308 3.57e-23 98.2
Msa0745950 MtrunA17_Chr4g0053431 39.103 156 84 5 8 156 2 153 8.78e-23 94.4
Msa0745950 MtrunA17_Chr5g0429661 43.925 107 56 3 11 116 122 225 9.64e-23 95.9
Msa0745950 MtrunA17_Chr6g0460661 35.766 137 85 3 11 147 16 149 2.77e-22 90.5
Msa0745950 MtrunA17_Chr5g0397841 45.631 103 54 2 5 107 104 204 1.13e-21 94.0
Msa0745950 MtrunA17_Chr5g0437321 45.098 102 54 2 7 108 15 114 1.22e-21 91.7
Msa0745950 MtrunA17_Chr2g0323321 50.000 74 37 0 10 83 12 85 2.49e-21 86.7
Msa0745950 MtrunA17_Chr6g0480581 38.095 105 63 2 11 115 4 106 5.00e-21 89.0
Msa0745950 MtrunA17_Chr7g0228401 37.692 130 55 3 8 113 252 379 2.94e-20 90.1
Msa0745950 MtrunA17_Chr5g0395221 44.444 81 45 0 3 83 6 86 3.58e-20 82.8
Msa0745950 MtrunA17_Chr3g0125801 41.880 117 60 4 2 112 4 118 5.04e-20 87.4
Msa0745950 MtrunA17_Chr4g0042611 47.297 74 39 0 10 83 13 86 5.98e-20 82.0
Msa0745950 MtrunA17_Chr8g0342511 45.122 82 45 0 2 83 5 86 9.56e-20 81.6
Msa0745950 MtrunA17_Chr1g0157731 39.216 102 60 2 11 112 91 190 1.65e-19 88.2
Msa0745950 MtrunA17_Chr1g0157731 34.615 104 57 2 9 107 37 134 6.78e-14 71.6
Msa0745950 MtrunA17_Chr3g0139671 39.216 102 60 2 11 112 85 184 2.47e-19 87.8
Msa0745950 MtrunA17_Chr3g0139671 35.577 104 56 2 9 107 31 128 2.72e-14 72.8
Msa0745950 MtrunA17_Chr7g0228531 41.176 102 57 3 11 112 220 318 6.80e-19 85.9
Msa0745950 MtrunA17_Chr7g0238651 41.346 104 58 2 14 115 10 112 7.78e-19 85.1
Msa0745950 MtrunA17_Chr8g0342531 45.122 82 45 0 2 83 5 86 1.77e-18 80.5
Msa0745950 MtrunA17_Chr5g0417621 39.091 110 62 3 6 112 129 236 2.06e-18 84.3
Msa0745950 MtrunA17_Chr4g0042501 41.509 106 55 4 11 112 105 207 2.76e-18 84.0
Msa0745950 MtrunA17_Chr7g0238631 38.462 117 65 3 11 122 113 227 4.78e-18 83.6
Msa0745950 MtrunA17_Chr7g0238631 34.021 97 63 1 11 107 61 156 1.01e-12 67.8
Msa0745950 MtrunA17_Chr2g0294811 41.975 81 47 0 3 83 6 86 9.62e-18 77.0
Msa0745950 MtrunA17_Chr8g0342461 45.783 83 44 1 2 83 5 87 1.45e-17 77.4
Msa0745950 MtrunA17_Chr7g0228481 39.623 106 61 3 11 116 220 322 1.76e-17 81.6
Msa0745950 MtrunA17_Chr8g0342471 45.783 83 44 1 2 83 5 87 4.12e-17 76.3
Msa0745950 MtrunA17_Chr6g0460671 34.752 141 85 3 11 146 99 237 1.07e-16 79.0
Msa0745950 MtrunA17_Chr7g0254261 40.816 98 56 2 11 108 89 184 1.77e-16 78.2
Msa0745950 MtrunA17_Chr7g0229131 35.354 99 63 1 41 139 4 101 2.26e-16 75.1
Msa0745950 MtrunA17_Chr1g0177901 32.215 149 90 4 21 163 4 147 3.79e-16 75.1
Msa0745950 MtrunA17_Chr7g0233061 34.483 116 66 4 4 116 173 281 4.11e-16 77.4
Msa0745950 MtrunA17_Chr7g0229101 45.070 71 38 1 41 111 4 73 1.29e-15 73.6
Msa0745950 MtrunA17_Chr5g0434901 44.776 67 36 1 45 111 9 74 1.64e-15 71.2
Msa0745950 MtrunA17_Chr8g0362231 29.319 191 122 6 3 192 14 192 3.10e-15 75.1
Msa0745950 MtrunA17_Chr3g0093811 40.000 95 52 3 34 124 4 97 7.08e-15 72.8
Msa0745950 MtrunA17_Chr5g0416341 35.922 103 64 2 13 115 28 128 2.25e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745950 AT2G26960.1 44.304 158 75 2 11 156 22 178 4.80e-42 149
Msa0745950 AT5G55020.1 51.695 118 56 1 10 127 27 143 8.31e-39 142
Msa0745950 AT2G32460.1 49.573 117 58 1 10 126 19 134 1.50e-38 141
Msa0745950 AT2G32460.2 49.573 117 58 1 10 126 7 122 1.69e-38 140
Msa0745950 AT4G26930.1 45.324 139 71 2 10 148 20 153 9.41e-38 137
Msa0745950 AT4G38620.1 45.161 155 79 4 7 158 10 161 1.22e-37 134
Msa0745950 AT3G11440.2 50.000 120 59 1 10 129 42 160 2.01e-37 137
Msa0745950 AT5G06100.1 41.848 184 86 7 10 174 33 214 2.98e-37 137
Msa0745950 AT3G11440.3 50.000 120 59 1 10 129 42 160 4.01e-37 138
Msa0745950 AT3G11440.4 50.000 120 59 1 10 129 42 160 4.01e-37 138
Msa0745950 AT3G11440.1 50.000 120 59 1 10 129 42 160 4.01e-37 138
Msa0745950 AT5G06100.5 41.848 184 86 7 10 174 33 214 5.25e-37 137
Msa0745950 AT5G06100.2 41.848 184 86 7 10 174 33 214 5.25e-37 137
Msa0745950 AT5G06100.3 41.848 184 86 7 10 174 33 214 5.25e-37 137
Msa0745950 AT5G06100.4 41.848 184 86 7 10 174 33 214 5.25e-37 137
Msa0745950 AT5G56110.1 50.847 118 56 2 8 124 11 127 6.18e-37 133
Msa0745950 AT2G26950.1 51.304 115 55 1 11 125 18 131 1.97e-36 133
Msa0745950 AT4G09460.1 46.377 138 72 2 7 143 10 146 3.11e-36 129
Msa0745950 AT4G21440.1 52.679 112 51 2 10 120 13 123 4.44e-35 129
Msa0745950 AT1G35515.1 50.435 115 55 2 7 120 10 123 5.36e-35 125
Msa0745950 AT4G01680.3 45.255 137 70 3 10 142 13 148 6.80e-35 126
Msa0745950 AT5G26660.1 48.800 125 62 2 10 133 13 136 9.98e-35 128
Msa0745950 AT1G57560.2 39.655 174 93 3 10 182 13 175 1.37e-34 126
Msa0745950 AT5G54230.1 51.327 113 53 2 9 120 12 123 1.53e-34 127
Msa0745950 AT4G34990.1 45.985 137 70 3 9 144 12 145 2.72e-34 125
Msa0745950 AT3G27810.1 49.107 112 56 1 5 116 16 126 3.50e-34 124
Msa0745950 AT4G01680.1 45.255 137 70 3 10 142 13 148 3.87e-34 126
Msa0745950 AT3G12720.1 48.333 120 60 2 9 127 22 140 4.11e-34 125
Msa0745950 AT4G28110.1 51.754 114 53 2 9 121 12 124 4.48e-34 125
Msa0745950 AT3G61250.1 49.107 112 55 2 10 120 13 123 4.86e-34 125
Msa0745950 AT5G65230.1 47.656 128 65 2 3 129 6 132 7.97e-34 125
Msa0745950 AT1G22640.1 48.333 120 60 2 7 125 10 128 8.74e-34 123
Msa0745950 AT5G40350.1 50.000 106 52 1 7 112 15 119 9.20e-34 122
Msa0745950 AT4G05100.1 53.571 112 50 2 10 120 14 124 9.46e-34 125
Msa0745950 AT1G09540.1 51.786 112 52 2 10 120 13 123 1.43e-33 125
Msa0745950 AT5G10280.1 48.333 120 60 2 10 128 13 131 1.94e-33 124
Msa0745950 AT1G57560.1 50.862 116 55 2 10 124 13 127 2.20e-33 124
Msa0745950 AT5G16770.4 45.833 120 63 2 10 128 13 131 7.90e-33 122
Msa0745950 AT5G16770.3 45.833 120 63 2 10 128 13 131 7.90e-33 122
Msa0745950 AT3G01140.2 42.963 135 75 2 7 140 10 143 8.26e-33 123
Msa0745950 AT3G23250.1 49.057 106 52 2 10 114 13 117 9.75e-33 121
Msa0745950 AT3G01140.1 42.963 135 75 2 7 140 53 186 1.17e-32 123
Msa0745950 AT3G49690.1 54.206 107 47 2 7 112 10 115 1.35e-32 122
Msa0745950 AT3G01530.1 51.456 103 49 1 7 109 23 124 1.41e-32 119
Msa0745950 AT5G15310.4 45.600 125 66 2 10 133 13 136 1.61e-32 120
Msa0745950 AT5G16770.1 45.833 120 63 2 10 128 13 131 1.61e-32 122
Msa0745950 AT5G16770.2 45.833 120 63 2 10 128 13 131 1.61e-32 122
Msa0745950 AT2G16720.1 43.077 130 72 2 11 139 14 142 1.67e-32 120
Msa0745950 AT1G18570.1 47.414 116 59 2 10 124 14 128 2.36e-32 122
Msa0745950 AT5G15310.2 45.600 125 66 2 10 133 13 136 2.71e-32 121
Msa0745950 AT4G37780.1 50.893 112 51 3 9 117 12 122 2.91e-32 120
Msa0745950 AT5G15310.1 45.600 125 66 2 10 133 13 136 3.03e-32 121
Msa0745950 AT5G12870.1 48.696 115 58 1 2 116 11 124 3.12e-32 120
Msa0745950 AT4G17785.2 49.123 114 56 2 9 121 13 125 5.42e-32 121
Msa0745950 AT5G07690.1 34.597 211 113 7 10 196 13 222 5.73e-32 120
Msa0745950 AT1G74080.1 46.032 126 66 2 10 134 13 137 6.01e-32 120
Msa0745950 AT4G17785.1 49.123 114 56 2 9 121 13 125 6.16e-32 121
Msa0745950 AT5G14750.1 48.182 110 51 2 4 108 6 114 8.27e-32 117
Msa0745950 AT1G56160.1 50.000 104 51 1 9 112 14 116 8.78e-32 119
Msa0745950 AT5G65790.1 54.206 107 47 2 7 112 10 115 9.55e-32 120
Msa0745950 AT3G27920.1 49.515 103 51 1 10 112 15 116 1.18e-31 117
Msa0745950 AT1G16490.1 50.000 104 51 1 9 112 14 116 1.30e-31 118
Msa0745950 AT3G08500.1 49.057 106 53 1 10 115 31 135 1.33e-31 120
Msa0745950 AT5G52600.1 41.892 148 73 4 9 146 12 156 1.50e-31 116
Msa0745950 AT5G16600.1 46.923 130 65 3 10 138 13 139 1.57e-31 119
Msa0745950 AT3G02940.2 33.471 242 118 7 10 210 13 252 1.81e-31 119
Msa0745950 AT5G61420.2 45.690 116 61 2 10 124 13 127 1.82e-31 120
Msa0745950 AT3G02940.1 45.000 120 64 2 10 128 13 131 3.51e-31 118
Msa0745950 AT3G02940.3 45.000 120 64 2 10 128 13 131 3.51e-31 118
Msa0745950 AT3G13540.1 36.424 151 82 4 10 147 24 173 5.23e-31 116
Msa0745950 AT3G13890.2 48.077 104 53 1 9 112 12 114 5.86e-31 118
Msa0745950 AT2G47190.1 46.789 109 57 1 7 115 18 125 6.01e-31 116
Msa0745950 AT4G01680.2 41.611 149 70 4 10 142 13 160 6.41e-31 118
Msa0745950 AT5G40330.1 46.602 103 54 1 10 112 13 114 6.93e-31 115
Msa0745950 AT1G74430.1 43.363 113 62 2 10 121 13 124 7.25e-31 116
Msa0745950 AT1G79180.1 41.379 145 77 3 9 146 14 157 7.51e-31 117
Msa0745950 AT5G07700.1 45.690 116 61 2 10 124 13 127 7.65e-31 117
Msa0745950 AT5G07700.2 45.690 116 61 2 10 124 13 127 7.65e-31 117
Msa0745950 AT1G18710.1 42.982 114 63 2 10 122 13 125 9.30e-31 115
Msa0745950 AT2G31180.1 45.045 111 60 1 9 119 12 121 9.33e-31 115
Msa0745950 AT1G34670.1 36.413 184 98 4 10 175 13 195 1.01e-30 118
Msa0745950 AT3G12820.1 46.847 111 57 2 7 116 12 121 1.72e-30 114
Msa0745950 AT1G06180.1 49.515 103 51 1 10 112 13 114 1.98e-30 114
Msa0745950 AT4G22680.1 42.208 154 83 4 9 158 12 163 2.13e-30 115
Msa0745950 AT5G57620.1 51.786 112 51 3 7 116 10 120 2.21e-30 116
Msa0745950 AT5G60890.1 45.690 116 61 2 10 124 13 127 2.23e-30 115
Msa0745950 AT1G08810.1 49.533 107 52 2 10 115 13 118 3.00e-30 115
Msa0745950 AT1G74650.1 46.667 105 55 1 8 112 11 114 4.20e-30 115
Msa0745950 AT2G36890.1 46.154 117 61 2 7 122 10 125 5.18e-30 114
Msa0745950 AT3G28910.1 49.074 108 53 2 9 115 12 118 6.97e-30 115
Msa0745950 AT5G14340.1 44.828 116 62 2 10 124 25 139 7.15e-30 114
Msa0745950 AT1G66230.1 46.032 126 62 3 10 130 13 137 8.81e-30 114
Msa0745950 AT2G36890.2 46.154 117 61 2 7 122 51 166 8.88e-30 115
Msa0745950 AT1G68320.1 44.037 109 60 1 8 116 18 125 8.99e-30 114
Msa0745950 AT3G47600.1 48.148 108 54 2 9 115 12 118 9.94e-30 114
Msa0745950 AT1G48000.1 45.370 108 58 1 8 115 31 137 1.03e-29 112
Msa0745950 AT3G28470.1 49.020 102 51 1 7 108 10 110 1.12e-29 114
Msa0745950 AT5G23000.1 51.429 105 49 2 9 112 12 115 1.13e-29 114
Msa0745950 AT1G25340.1 43.636 110 61 1 7 116 16 124 1.23e-29 113
Msa0745950 AT1G63910.1 46.957 115 59 2 2 115 5 118 1.24e-29 115
Msa0745950 AT5G62320.1 43.382 136 68 3 10 137 14 148 2.89e-29 111
Msa0745950 AT5G62470.2 48.148 108 54 2 9 115 12 118 3.12e-29 114
Msa0745950 AT4G13480.1 48.113 106 54 1 10 115 7 111 9.65e-29 110
Msa0745950 AT3G24310.1 47.170 106 55 1 10 115 19 123 1.16e-28 110
Msa0745950 AT3G30210.1 33.503 197 106 5 10 184 28 221 1.97e-28 110
Msa0745950 AT2G47460.1 48.571 105 52 2 10 113 13 116 2.15e-28 112
Msa0745950 AT3G62610.1 32.661 248 147 8 10 252 13 245 2.16e-28 111
Msa0745950 AT3G13890.1 42.500 120 59 2 2 112 5 123 4.99e-28 110
Msa0745950 AT5G62470.1 48.148 108 53 3 9 115 12 117 5.57e-28 110
Msa0745950 AT3G60460.1 44.954 109 58 2 8 115 10 117 7.84e-28 108
Msa0745950 AT5G49330.1 46.465 99 52 1 10 108 13 110 1.82e-27 108
Msa0745950 AT5G35550.1 42.342 111 63 1 2 112 7 116 2.41e-27 106
Msa0745950 AT5G59780.3 43.966 116 61 2 8 120 7 121 6.07e-27 105
Msa0745950 AT3G53200.1 47.573 103 53 1 10 112 10 111 1.27e-26 104
Msa0745950 AT1G25340.2 41.818 110 58 2 7 116 16 119 1.31e-26 105
Msa0745950 AT4G12350.1 46.903 113 58 2 9 120 12 123 1.42e-26 105
Msa0745950 AT1G25340.3 43.396 106 54 2 7 112 16 115 1.85e-26 105
Msa0745950 AT3G46130.1 43.860 114 60 2 10 120 10 122 2.18e-26 104
Msa0745950 AT3G06490.1 46.789 109 57 1 8 116 18 125 2.26e-26 105
Msa0745950 AT1G56650.1 39.844 128 67 2 4 122 3 129 3.67e-26 103
Msa0745950 AT5G49620.1 44.954 109 59 1 8 116 25 132 1.30e-25 103
Msa0745950 AT1G79180.2 34.270 178 76 4 9 146 14 190 1.93e-25 103
Msa0745950 AT1G66380.1 43.810 105 58 1 4 108 3 106 2.12e-25 98.2
Msa0745950 AT3G48920.1 43.519 108 60 1 5 112 14 120 2.23e-25 101
Msa0745950 AT5G52260.1 46.903 113 56 2 10 122 13 121 3.28e-25 101
Msa0745950 AT1G66370.1 43.434 99 55 1 10 108 9 106 4.15e-25 100
Msa0745950 AT4G25560.1 45.631 103 55 1 10 112 11 112 4.87e-25 101
Msa0745950 AT5G26660.2 48.387 93 46 2 42 133 14 105 7.66e-25 101
Msa0745950 AT3G27785.1 41.593 113 64 2 4 116 182 292 9.34e-25 102
Msa0745950 AT4G18770.1 46.078 102 53 2 11 112 217 316 1.76e-24 102
Msa0745950 AT3G50060.1 49.533 107 51 3 7 112 2 106 2.56e-24 99.8
Msa0745950 AT1G66390.1 42.202 109 62 1 4 112 3 110 2.83e-24 98.6
Msa0745950 AT5G49620.2 40.984 122 59 1 8 116 25 146 6.59e-24 99.0
Msa0745950 AT5G40360.1 45.631 103 54 2 11 113 158 258 6.71e-24 99.4
Msa0745950 AT5G67300.1 48.598 107 52 3 7 112 2 106 2.81e-23 97.1
Msa0745950 AT4G37260.1 46.364 110 56 3 11 119 13 120 4.86e-23 96.7
Msa0745950 AT5G58850.1 45.872 109 55 3 5 112 99 204 5.53e-23 97.8
Msa0745950 AT2G23290.1 45.536 112 58 3 2 112 4 113 1.37e-22 95.1
Msa0745950 AT3G27810.2 50.667 75 36 1 42 116 4 77 2.66e-21 88.6
Msa0745950 AT5G40350.2 50.685 73 35 1 40 112 3 74 2.85e-21 88.2
Msa0745950 AT5G11050.1 44.660 103 53 3 11 112 105 204 6.45e-21 92.0
Msa0745950 AT2G25230.1 42.373 118 63 4 7 122 22 136 8.84e-21 88.6
Msa0745950 AT2G39880.1 47.059 102 52 2 11 112 50 149 9.81e-21 90.9
Msa0745950 AT3G09230.1 42.857 105 58 2 8 112 52 154 1.03e-20 90.9
Msa0745950 AT5G17800.1 36.054 147 86 4 1 141 80 224 1.52e-20 89.7
Msa0745950 AT3G53200.2 54.930 71 31 1 42 112 9 78 1.61e-20 87.4
Msa0745950 AT1G17950.1 40.517 116 60 4 11 119 5 118 1.97e-20 88.2
Msa0745950 AT1G69560.2 40.000 105 61 2 4 108 116 218 2.14e-20 89.7
Msa0745950 AT1G69560.1 40.909 110 60 3 4 110 100 207 2.23e-20 89.4
Msa0745950 AT3G55730.1 44.118 102 55 2 11 112 56 155 4.31e-20 89.4
Msa0745950 AT4G32730.1 40.171 117 67 3 11 126 87 201 5.05e-20 90.1
Msa0745950 AT4G32730.1 34.234 111 62 2 2 107 26 130 1.42e-14 73.9
Msa0745950 AT4G32730.5 40.171 117 67 3 11 126 87 201 5.62e-20 90.1
Msa0745950 AT4G32730.5 34.234 111 62 2 2 107 26 130 1.32e-14 73.9
Msa0745950 AT4G32730.4 40.171 117 67 3 11 126 87 201 5.62e-20 90.1
Msa0745950 AT4G32730.4 34.234 111 62 2 2 107 26 130 1.32e-14 73.9
Msa0745950 AT4G32730.3 40.171 117 67 3 11 126 87 201 5.62e-20 90.1
Msa0745950 AT4G32730.3 34.234 111 62 2 2 107 26 130 1.32e-14 73.9
Msa0745950 AT4G32730.2 40.171 117 67 3 11 126 87 201 5.62e-20 90.1
Msa0745950 AT4G32730.2 34.234 111 62 2 2 107 26 130 1.32e-14 73.9
Msa0745950 AT4G33450.1 38.679 106 60 3 10 112 18 121 1.79e-19 85.5
Msa0745950 AT2G37630.1 42.857 119 64 3 14 130 7 123 1.94e-19 87.0
Msa0745950 AT3G12820.2 50.000 74 35 2 44 116 1 73 2.66e-19 83.6
Msa0745950 AT5G11510.3 38.235 102 61 2 11 112 81 180 8.55e-19 86.7
Msa0745950 AT5G11510.3 33.962 106 69 1 2 107 20 124 2.88e-14 73.2
Msa0745950 AT5G11510.1 38.235 102 61 2 11 112 81 180 8.55e-19 86.7
Msa0745950 AT5G11510.1 33.962 106 69 1 2 107 20 124 2.88e-14 73.2
Msa0745950 AT5G11510.4 38.235 102 61 2 11 112 81 180 8.55e-19 86.7
Msa0745950 AT5G11510.4 33.962 106 69 1 2 107 20 124 2.88e-14 73.2
Msa0745950 AT1G73410.2 41.739 115 59 4 11 120 6 117 9.39e-19 82.4
Msa0745950 AT5G11510.2 38.235 102 61 2 11 112 81 180 1.07e-18 86.3
Msa0745950 AT5G11510.2 33.962 106 69 1 2 107 20 124 3.09e-14 72.8
Msa0745950 AT3G09370.2 40.000 105 61 2 8 112 132 234 1.09e-18 85.9
Msa0745950 AT3G09370.2 38.144 97 59 1 11 107 83 178 4.28e-15 75.1
Msa0745950 AT1G73410.1 41.739 115 59 4 11 120 6 117 1.15e-18 83.2
Msa0745950 AT5G11510.5 38.235 102 61 2 11 112 81 180 1.21e-18 85.9
Msa0745950 AT5G11510.5 33.962 106 69 1 2 107 20 124 3.66e-14 72.8
Msa0745950 AT5G14750.3 46.377 69 36 1 44 112 17 84 1.27e-18 81.3
Msa0745950 AT3G09370.3 40.000 105 61 2 8 112 140 242 1.40e-18 85.5
Msa0745950 AT3G09370.3 38.144 97 59 1 11 107 91 186 4.97e-15 75.1
Msa0745950 AT3G09370.1 40.000 105 61 2 8 112 127 229 1.50e-18 85.5
Msa0745950 AT3G09370.1 38.144 97 59 1 11 107 78 173 5.13e-15 75.1
Msa0745950 AT1G26780.1 41.509 106 55 4 11 112 98 200 1.87e-18 83.2
Msa0745950 AT1G26780.2 40.000 105 58 3 11 112 98 200 2.07e-18 84.3
Msa0745950 AT3G46130.3 46.988 83 40 2 41 120 9 90 2.09e-18 82.0
Msa0745950 AT5G59780.2 47.561 82 39 2 42 120 20 100 3.94e-18 81.3
Msa0745950 AT3G47600.2 49.333 75 36 2 42 115 39 112 3.97e-18 83.2
Msa0745950 AT5G02320.1 40.000 105 60 3 11 114 127 229 4.49e-18 84.0
Msa0745950 AT5G02320.1 35.052 97 62 1 11 107 75 170 1.50e-13 70.9
Msa0745950 AT5G02320.2 40.000 105 60 3 11 114 127 229 4.49e-18 84.0
Msa0745950 AT5G02320.2 35.052 97 62 1 11 107 75 170 1.50e-13 70.9
Msa0745950 AT5G02320.3 40.000 105 60 3 11 114 67 169 4.78e-18 84.0
Msa0745950 AT5G02320.3 35.052 97 62 1 11 107 15 110 1.55e-13 70.5
Msa0745950 AT3G46130.4 47.561 82 39 2 42 120 20 100 5.86e-18 81.3
Msa0745950 AT5G35550.2 34.821 112 60 2 42 153 50 148 1.36e-17 80.5
Msa0745950 AT4G00540.2 40.909 110 59 4 10 115 102 209 3.18e-17 81.3
Msa0745950 AT4G00540.1 40.909 110 59 4 10 115 100 207 3.55e-17 81.3
Msa0745950 AT5G40430.1 38.393 112 64 4 7 117 50 157 4.14e-17 79.0
Msa0745950 AT3G29020.1 38.393 112 64 3 4 112 58 167 5.83e-17 78.2
Msa0745950 AT3G29020.2 38.393 112 64 3 4 112 60 169 6.79e-17 79.3
Msa0745950 AT1G66380.2 47.761 67 35 0 5 71 4 70 1.27e-16 74.3
Msa0745950 AT1G66380.3 48.529 68 34 1 41 108 7 73 8.06e-16 72.0
Msa0745950 AT1G22640.3 46.479 71 36 2 56 125 2 71 1.38e-14 71.2
Msa0745950 AT1G14350.2 35.922 103 64 2 13 115 27 127 3.08e-14 72.4
Msa0745950 AT1G14350.1 35.922 103 64 2 13 115 27 127 3.08e-14 72.4
Msa0745950 AT2G02820.2 35.922 103 64 2 13 115 32 132 3.68e-14 72.4
Msa0745950 AT2G02820.1 35.922 103 64 2 13 115 32 132 4.12e-14 72.4
Msa0745950 AT2G02820.3 38.043 92 55 2 13 104 32 121 9.80e-14 70.5
Msa0745950 AT3G18100.1 39.796 98 57 2 9 106 544 639 2.98e-13 70.1
Msa0745950 AT3G18100.3 39.796 98 57 2 9 106 496 591 2.99e-13 70.1
Msa0745950 AT3G18100.4 39.796 98 57 2 9 106 383 478 4.28e-13 69.3
Msa0745950 AT3G18100.2 39.796 98 57 2 9 106 331 426 5.44e-13 68.9
Msa0745950 AT5G39700.1 35.354 99 62 2 10 108 55 151 3.41e-12 64.3
Msa0745950 AT3G23250.2 43.333 60 32 2 56 114 2 60 5.60e-11 61.6

Find 53 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCAGGGGTAGCATTAT+TGG 0.186386 5_1:+67925653 Msa0745950:intron
TAATATTTCATCTTCTTCTT+TGG 0.201233 5_1:-67924936 None:intergenic
CCTACAACCAGATGTGAAAA+AGG 0.249095 5_1:+67925063 Msa0745950:CDS
TCAGTATCATGGTGACTTTA+TGG 0.269513 5_1:+67925757 Msa0745950:CDS
ATAATGACATCAAGAACTTT+TGG 0.308735 5_1:+67925327 Msa0745950:CDS
ACATTATTGTAGAACATGTT+TGG 0.314107 5_1:-67925515 None:intergenic
CTTGTGAATCCTCAACTTGT+TGG 0.318952 5_1:-67925433 None:intergenic
AAAACCATGGAACAAGAAAT+TGG 0.347187 5_1:+67924972 Msa0745950:CDS
TTTCAGTTCTATGAAAAGTT+TGG 0.348485 5_1:+67925118 Msa0745950:CDS
GTACTTCAACATTGATTGAT+AGG 0.368810 5_1:+67925543 Msa0745950:CDS
ATGTATTGACTTCAGTAATA+TGG 0.373216 5_1:+67925865 Msa0745950:CDS
CATTATTGTAGAACATGTTT+GGG 0.379874 5_1:-67925514 None:intergenic
AAACCTCCTTGATGACTTCA+TGG 0.396227 5_1:+67925832 Msa0745950:CDS
ATGTCATTATCGCTTCTTCC+CGG 0.399929 5_1:-67925314 None:intergenic
CGTTCCAATTTCTTGTTCCA+TGG 0.405196 5_1:-67924976 None:intergenic
TCATCCGGTTCCATCTTGTC+AGG 0.436579 5_1:-67925395 None:intergenic
TCCTCAAATTCCACCACCTA+TGG 0.442042 5_1:+67925730 Msa0745950:CDS
GGATAGTCACCAAGCATCAT+AGG 0.444307 5_1:-67925710 None:intergenic
AAAAGTTTGGTGAACTCAAA+TGG 0.458696 5_1:+67925131 Msa0745950:CDS
TGAAATATTAAAAGCATATG+TGG 0.459693 5_1:+67924949 Msa0745950:CDS
TCCATAGGTGGTGGAATTTG+AGG 0.460831 5_1:-67925731 None:intergenic
CTACTATTCAACTCATCATC+CGG 0.471736 5_1:-67925410 None:intergenic
TGGAACTTCTCATATACCTA+TGG 0.477216 5_1:+67925673 Msa0745950:CDS
CTTCCTTCACCTATGATGCT+TGG 0.481674 5_1:+67925701 Msa0745950:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.484450 5_1:+67925032 Msa0745950:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 5_1:+67925385 Msa0745950:CDS
CGGTTCCATCTTGTCAGGGA+AGG 0.508810 5_1:-67925390 None:intergenic
CTTCCCTGACAAGATGGAAC+CGG 0.509188 5_1:+67925391 Msa0745950:CDS
ATGGAGGACGATGTTGAAGC+CGG 0.516340 5_1:+67925884 Msa0745950:CDS
CAAATGGTCTAAGCTGGCTC+AGG 0.532223 5_1:+67925147 Msa0745950:CDS
TACTGAGTCTCCATAGGTGG+TGG 0.534844 5_1:-67925740 None:intergenic
GAATAGTAGCCAACAAGTTG+AGG 0.541704 5_1:+67925424 Msa0745950:CDS
AAACATGTTCTACAATAATG+TGG 0.542808 5_1:+67925517 Msa0745950:CDS
TGAACTCAAATGGTCTAAGC+TGG 0.555890 5_1:+67925141 Msa0745950:CDS
ATGGTCTAAGCTGGCTCAGG+AGG 0.563124 5_1:+67925150 Msa0745950:CDS
AACATGTTCTACAATAATGT+GGG 0.571214 5_1:+67925518 Msa0745950:CDS
AGCATCATAGGTGAAGGAAG+TGG 0.575321 5_1:-67925698 None:intergenic
CCTATGGAGACTCAGTATCA+TGG 0.585538 5_1:+67925746 Msa0745950:CDS
CCATGATACTGAGTCTCCAT+AGG 0.586617 5_1:-67925746 None:intergenic
GGTGAAGGAAGTGGAGCCAT+AGG 0.590422 5_1:-67925689 None:intergenic
ATGGATCCATGAAGTCATCA+AGG 0.595005 5_1:-67925838 None:intergenic
TCACCAAGCATCATAGGTGA+AGG 0.597667 5_1:-67925704 None:intergenic
GGTTCCATCTTGTCAGGGAA+GGG 0.605286 5_1:-67925389 None:intergenic
AAAAGAAAACTTGAAAAGCG+TGG 0.617466 5_1:+67925359 Msa0745950:CDS
CTGAAGTCAATACATAGACA+TGG 0.618549 5_1:-67925857 None:intergenic
AAAGCATATGTGGAAAACCA+TGG 0.619332 5_1:+67924959 Msa0745950:CDS
CATCCGGTTCCATCTTGTCA+GGG 0.638065 5_1:-67925394 None:intergenic
TATTGACTTCAGTAATATGG+AGG 0.663394 5_1:+67925868 Msa0745950:CDS
ACTGTCAAATAAACGACCGC+CGG 0.667707 5_1:-67925903 None:intergenic
TGATACTGAGTCTCCATAGG+TGG 0.687296 5_1:-67925743 None:intergenic
GAGGACGATGTTGAAGCCGG+CGG 0.723885 5_1:+67925887 Msa0745950:CDS
GATCCATGAAGTCATCAAGG+AGG 0.752147 5_1:-67925835 None:intergenic
TGGAACAAGAAATTGGAACG+AGG 0.775000 5_1:+67924979 Msa0745950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAACATATAAAAGAAAA+TGG - chr5_1:67925590-67925609 None:intergenic 10.0%
!!! TTTTAACATATAAAAGAAAA+TGG - chr5_1:67925590-67925609 None:intergenic 10.0%
!!! TATTTTCTAAATTTCAATTG+TGG - chr5_1:67925476-67925495 None:intergenic 15.0%
!! ATGTTAAAATTGTTTATATG+AGG + chr5_1:67925601-67925620 Msa0745950:intron 15.0%
!!! TATTTTCTAAATTTCAATTG+TGG - chr5_1:67925476-67925495 None:intergenic 15.0%
!! ATGTTAAAATTGTTTATATG+AGG + chr5_1:67925601-67925620 Msa0745950:intron 15.0%
!! TAATATTTCATCTTCTTCTT+TGG - chr5_1:67924939-67924958 None:intergenic 20.0%
!!! TGAAATATTAAAAGCATATG+TGG + chr5_1:67924949-67924968 Msa0745950:CDS 20.0%
!! TAATATTTCATCTTCTTCTT+TGG - chr5_1:67924939-67924958 None:intergenic 20.0%
!!! TGAAATATTAAAAGCATATG+TGG + chr5_1:67924949-67924968 Msa0745950:CDS 20.0%
!!! GTTTTTTCTTCTTCACTAAA+TGG - chr5_1:67925091-67925110 None:intergenic 25.0%
! TTTCAGTTCTATGAAAAGTT+TGG + chr5_1:67925118-67925137 Msa0745950:CDS 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr5_1:67925327-67925346 Msa0745950:CDS 25.0%
! CATTATTGTAGAACATGTTT+GGG - chr5_1:67925517-67925536 None:intergenic 25.0%
! ACATTATTGTAGAACATGTT+TGG - chr5_1:67925518-67925537 None:intergenic 25.0%
! AAACATGTTCTACAATAATG+TGG + chr5_1:67925517-67925536 Msa0745950:CDS 25.0%
! AACATGTTCTACAATAATGT+GGG + chr5_1:67925518-67925537 Msa0745950:CDS 25.0%
! TACTTTCATCAATTTCTTTC+AGG + chr5_1:67925639-67925658 Msa0745950:intron 25.0%
! ACTTTCATCAATTTCTTTCA+GGG + chr5_1:67925640-67925659 Msa0745950:intron 25.0%
!!! ATGTATTGACTTCAGTAATA+TGG + chr5_1:67925865-67925884 Msa0745950:CDS 25.0%
!!! GTTTTTTCTTCTTCACTAAA+TGG - chr5_1:67925091-67925110 None:intergenic 25.0%
! TTTCAGTTCTATGAAAAGTT+TGG + chr5_1:67925118-67925137 Msa0745950:CDS 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr5_1:67925327-67925346 Msa0745950:CDS 25.0%
! CATTATTGTAGAACATGTTT+GGG - chr5_1:67925517-67925536 None:intergenic 25.0%
! ACATTATTGTAGAACATGTT+TGG - chr5_1:67925518-67925537 None:intergenic 25.0%
! AAACATGTTCTACAATAATG+TGG + chr5_1:67925517-67925536 Msa0745950:CDS 25.0%
! AACATGTTCTACAATAATGT+GGG + chr5_1:67925518-67925537 Msa0745950:CDS 25.0%
! TACTTTCATCAATTTCTTTC+AGG + chr5_1:67925639-67925658 Msa0745950:intron 25.0%
! ACTTTCATCAATTTCTTTCA+GGG + chr5_1:67925640-67925659 Msa0745950:intron 25.0%
!!! ATGTATTGACTTCAGTAATA+TGG + chr5_1:67925865-67925884 Msa0745950:CDS 25.0%
!!! CCATGTTCCTTTTTTAGTAT+CGG - chr5_1:67924915-67924934 None:intergenic 30.0%
AAAACCATGGAACAAGAAAT+TGG + chr5_1:67924972-67924991 Msa0745950:CDS 30.0%
! AAAAGTTTGGTGAACTCAAA+TGG + chr5_1:67925131-67925150 Msa0745950:CDS 30.0%
CAAGTGGTGAATATTATAGA+AGG - chr5_1:67925234-67925253 None:intergenic 30.0%
AAAAGAAAACTTGAAAAGCG+TGG + chr5_1:67925359-67925378 Msa0745950:CDS 30.0%
! TTTGGGACATCAAAAATTGA+TGG - chr5_1:67925500-67925519 None:intergenic 30.0%
! GTACTTCAACATTGATTGAT+AGG + chr5_1:67925543-67925562 Msa0745950:CDS 30.0%
CTTTCATCAATTTCTTTCAG+GGG + chr5_1:67925641-67925660 Msa0745950:intron 30.0%
! ACTTTATGGATCCAGATTTT+TGG + chr5_1:67925771-67925790 Msa0745950:CDS 30.0%
!! TATTGACTTCAGTAATATGG+AGG + chr5_1:67925868-67925887 Msa0745950:CDS 30.0%
!!! CCATGTTCCTTTTTTAGTAT+CGG - chr5_1:67924915-67924934 None:intergenic 30.0%
AAAACCATGGAACAAGAAAT+TGG + chr5_1:67924972-67924991 Msa0745950:CDS 30.0%
! AAAAGTTTGGTGAACTCAAA+TGG + chr5_1:67925131-67925150 Msa0745950:CDS 30.0%
CAAGTGGTGAATATTATAGA+AGG - chr5_1:67925234-67925253 None:intergenic 30.0%
AAAAGAAAACTTGAAAAGCG+TGG + chr5_1:67925359-67925378 Msa0745950:CDS 30.0%
! TTTGGGACATCAAAAATTGA+TGG - chr5_1:67925500-67925519 None:intergenic 30.0%
! GTACTTCAACATTGATTGAT+AGG + chr5_1:67925543-67925562 Msa0745950:CDS 30.0%
CTTTCATCAATTTCTTTCAG+GGG + chr5_1:67925641-67925660 Msa0745950:intron 30.0%
! ACTTTATGGATCCAGATTTT+TGG + chr5_1:67925771-67925790 Msa0745950:CDS 30.0%
!! TATTGACTTCAGTAATATGG+AGG + chr5_1:67925868-67925887 Msa0745950:CDS 30.0%
TCATCAGCCGATACTAAAAA+AGG + chr5_1:67924905-67924924 Msa0745950:CDS 35.0%
CCGATACTAAAAAAGGAACA+TGG + chr5_1:67924912-67924931 Msa0745950:CDS 35.0%
AAAGCATATGTGGAAAACCA+TGG + chr5_1:67924959-67924978 Msa0745950:CDS 35.0%
! GAACGAGGTATCAAAAAATG+CGG + chr5_1:67924994-67925013 Msa0745950:CDS 35.0%
! AACGAGGTATCAAAAAATGC+GGG + chr5_1:67924995-67925014 Msa0745950:CDS 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + chr5_1:67925032-67925051 Msa0745950:CDS 35.0%
CTACAACCAGATGTGAAAAA+GGG + chr5_1:67925064-67925083 Msa0745950:CDS 35.0%
CAAAATAAGCAACACACAAG+TGG - chr5_1:67925250-67925269 None:intergenic 35.0%
! GTTCTTTTTGTGTCAGTTAC+CGG + chr5_1:67925295-67925314 Msa0745950:intron 35.0%
! TTCTTTTTGTGTCAGTTACC+GGG + chr5_1:67925296-67925315 Msa0745950:intron 35.0%
CTACTATTCAACTCATCATC+CGG - chr5_1:67925413-67925432 None:intergenic 35.0%
TGGAACTTCTCATATACCTA+TGG + chr5_1:67925673-67925692 Msa0745950:CDS 35.0%
TCAGTATCATGGTGACTTTA+TGG + chr5_1:67925757-67925776 Msa0745950:CDS 35.0%
CTGTTGTGTAACCAAAAATC+TGG - chr5_1:67925785-67925804 None:intergenic 35.0%
CTGAAGTCAATACATAGACA+TGG - chr5_1:67925860-67925879 None:intergenic 35.0%
TCATCAGCCGATACTAAAAA+AGG + chr5_1:67924905-67924924 Msa0745950:CDS 35.0%
CCGATACTAAAAAAGGAACA+TGG + chr5_1:67924912-67924931 Msa0745950:CDS 35.0%
AAAGCATATGTGGAAAACCA+TGG + chr5_1:67924959-67924978 Msa0745950:CDS 35.0%
! GAACGAGGTATCAAAAAATG+CGG + chr5_1:67924994-67925013 Msa0745950:CDS 35.0%
! AACGAGGTATCAAAAAATGC+GGG + chr5_1:67924995-67925014 Msa0745950:CDS 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG + chr5_1:67925032-67925051 Msa0745950:CDS 35.0%
CTACAACCAGATGTGAAAAA+GGG + chr5_1:67925064-67925083 Msa0745950:CDS 35.0%
CAAAATAAGCAACACACAAG+TGG - chr5_1:67925250-67925269 None:intergenic 35.0%
! GTTCTTTTTGTGTCAGTTAC+CGG + chr5_1:67925295-67925314 Msa0745950:intron 35.0%
! TTCTTTTTGTGTCAGTTACC+GGG + chr5_1:67925296-67925315 Msa0745950:intron 35.0%
CTACTATTCAACTCATCATC+CGG - chr5_1:67925413-67925432 None:intergenic 35.0%
TGGAACTTCTCATATACCTA+TGG + chr5_1:67925673-67925692 Msa0745950:CDS 35.0%
TCAGTATCATGGTGACTTTA+TGG + chr5_1:67925757-67925776 Msa0745950:CDS 35.0%
CTGTTGTGTAACCAAAAATC+TGG - chr5_1:67925785-67925804 None:intergenic 35.0%
CTGAAGTCAATACATAGACA+TGG - chr5_1:67925860-67925879 None:intergenic 35.0%
CGTTCCAATTTCTTGTTCCA+TGG - chr5_1:67924979-67924998 None:intergenic 40.0%
TGGAACAAGAAATTGGAACG+AGG + chr5_1:67924979-67924998 Msa0745950:CDS 40.0%
! ACGAGGTATCAAAAAATGCG+GGG + chr5_1:67924996-67925015 Msa0745950:CDS 40.0%
!! CCTTTTTCACATCTGGTTGT+AGG - chr5_1:67925066-67925085 None:intergenic 40.0%
CCTACAACCAGATGTGAAAA+AGG + chr5_1:67925063-67925082 Msa0745950:CDS 40.0%
!! AATGGACCCTTTTTCACATC+TGG - chr5_1:67925073-67925092 None:intergenic 40.0%
TGAACTCAAATGGTCTAAGC+TGG + chr5_1:67925141-67925160 Msa0745950:CDS 40.0%
ATGTCATTATCGCTTCTTCC+CGG - chr5_1:67925317-67925336 None:intergenic 40.0%
GAATAGTAGCCAACAAGTTG+AGG + chr5_1:67925424-67925443 Msa0745950:CDS 40.0%
CTTGTGAATCCTCAACTTGT+TGG - chr5_1:67925436-67925455 None:intergenic 40.0%
TCTTTCAGGGGTAGCATTAT+TGG + chr5_1:67925653-67925672 Msa0745950:intron 40.0%
! AAACCTCCTTGATGACTTCA+TGG + chr5_1:67925832-67925851 Msa0745950:CDS 40.0%
ATGGATCCATGAAGTCATCA+AGG - chr5_1:67925841-67925860 None:intergenic 40.0%
CGTTCCAATTTCTTGTTCCA+TGG - chr5_1:67924979-67924998 None:intergenic 40.0%
TGGAACAAGAAATTGGAACG+AGG + chr5_1:67924979-67924998 Msa0745950:CDS 40.0%
! ACGAGGTATCAAAAAATGCG+GGG + chr5_1:67924996-67925015 Msa0745950:CDS 40.0%
!! CCTTTTTCACATCTGGTTGT+AGG - chr5_1:67925066-67925085 None:intergenic 40.0%
CCTACAACCAGATGTGAAAA+AGG + chr5_1:67925063-67925082 Msa0745950:CDS 40.0%
!! AATGGACCCTTTTTCACATC+TGG - chr5_1:67925073-67925092 None:intergenic 40.0%
TGAACTCAAATGGTCTAAGC+TGG + chr5_1:67925141-67925160 Msa0745950:CDS 40.0%
ATGTCATTATCGCTTCTTCC+CGG - chr5_1:67925317-67925336 None:intergenic 40.0%
GAATAGTAGCCAACAAGTTG+AGG + chr5_1:67925424-67925443 Msa0745950:CDS 40.0%
CTTGTGAATCCTCAACTTGT+TGG - chr5_1:67925436-67925455 None:intergenic 40.0%
TCTTTCAGGGGTAGCATTAT+TGG + chr5_1:67925653-67925672 Msa0745950:intron 40.0%
! AAACCTCCTTGATGACTTCA+TGG + chr5_1:67925832-67925851 Msa0745950:CDS 40.0%
ATGGATCCATGAAGTCATCA+AGG - chr5_1:67925841-67925860 None:intergenic 40.0%
AGCATCATAGGTGAAGGAAG+TGG - chr5_1:67925701-67925720 None:intergenic 45.0%
CTTCCTTCACCTATGATGCT+TGG + chr5_1:67925701-67925720 Msa0745950:CDS 45.0%
TCACCAAGCATCATAGGTGA+AGG - chr5_1:67925707-67925726 None:intergenic 45.0%
GGATAGTCACCAAGCATCAT+AGG - chr5_1:67925713-67925732 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + chr5_1:67925730-67925749 Msa0745950:CDS 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - chr5_1:67925734-67925753 None:intergenic 45.0%
TGATACTGAGTCTCCATAGG+TGG - chr5_1:67925746-67925765 None:intergenic 45.0%
CCATGATACTGAGTCTCCAT+AGG - chr5_1:67925749-67925768 None:intergenic 45.0%
CCTATGGAGACTCAGTATCA+TGG + chr5_1:67925746-67925765 Msa0745950:CDS 45.0%
GATCCATGAAGTCATCAAGG+AGG - chr5_1:67925838-67925857 None:intergenic 45.0%
ACTGTCAAATAAACGACCGC+CGG - chr5_1:67925906-67925925 None:intergenic 45.0%
AGCATCATAGGTGAAGGAAG+TGG - chr5_1:67925701-67925720 None:intergenic 45.0%
CTTCCTTCACCTATGATGCT+TGG + chr5_1:67925701-67925720 Msa0745950:CDS 45.0%
TCACCAAGCATCATAGGTGA+AGG - chr5_1:67925707-67925726 None:intergenic 45.0%
GGATAGTCACCAAGCATCAT+AGG - chr5_1:67925713-67925732 None:intergenic 45.0%
TCCTCAAATTCCACCACCTA+TGG + chr5_1:67925730-67925749 Msa0745950:CDS 45.0%
!! TCCATAGGTGGTGGAATTTG+AGG - chr5_1:67925734-67925753 None:intergenic 45.0%
TGATACTGAGTCTCCATAGG+TGG - chr5_1:67925746-67925765 None:intergenic 45.0%
CCATGATACTGAGTCTCCAT+AGG - chr5_1:67925749-67925768 None:intergenic 45.0%
CCTATGGAGACTCAGTATCA+TGG + chr5_1:67925746-67925765 Msa0745950:CDS 45.0%
GATCCATGAAGTCATCAAGG+AGG - chr5_1:67925838-67925857 None:intergenic 45.0%
ACTGTCAAATAAACGACCGC+CGG - chr5_1:67925906-67925925 None:intergenic 45.0%
! CAAATGGTCTAAGCTGGCTC+AGG + chr5_1:67925147-67925166 Msa0745950:CDS 50.0%
GGTTCCATCTTGTCAGGGAA+GGG - chr5_1:67925392-67925411 None:intergenic 50.0%
CTTCCCTGACAAGATGGAAC+CGG + chr5_1:67925391-67925410 Msa0745950:CDS 50.0%
CATCCGGTTCCATCTTGTCA+GGG - chr5_1:67925397-67925416 None:intergenic 50.0%
TCATCCGGTTCCATCTTGTC+AGG - chr5_1:67925398-67925417 None:intergenic 50.0%
TACTGAGTCTCCATAGGTGG+TGG - chr5_1:67925743-67925762 None:intergenic 50.0%
ATGGAGGACGATGTTGAAGC+CGG + chr5_1:67925884-67925903 Msa0745950:CDS 50.0%
! CAAATGGTCTAAGCTGGCTC+AGG + chr5_1:67925147-67925166 Msa0745950:CDS 50.0%
GGTTCCATCTTGTCAGGGAA+GGG - chr5_1:67925392-67925411 None:intergenic 50.0%
CTTCCCTGACAAGATGGAAC+CGG + chr5_1:67925391-67925410 Msa0745950:CDS 50.0%
CATCCGGTTCCATCTTGTCA+GGG - chr5_1:67925397-67925416 None:intergenic 50.0%
TCATCCGGTTCCATCTTGTC+AGG - chr5_1:67925398-67925417 None:intergenic 50.0%
TACTGAGTCTCCATAGGTGG+TGG - chr5_1:67925743-67925762 None:intergenic 50.0%
ATGGAGGACGATGTTGAAGC+CGG + chr5_1:67925884-67925903 Msa0745950:CDS 50.0%
! ATGGTCTAAGCTGGCTCAGG+AGG + chr5_1:67925150-67925169 Msa0745950:CDS 55.0%
GTCACCCTTCCCTGACAAGA+TGG + chr5_1:67925385-67925404 Msa0745950:CDS 55.0%
CGGTTCCATCTTGTCAGGGA+AGG - chr5_1:67925393-67925412 None:intergenic 55.0%
GGTGAAGGAAGTGGAGCCAT+AGG - chr5_1:67925692-67925711 None:intergenic 55.0%
! ATGGTCTAAGCTGGCTCAGG+AGG + chr5_1:67925150-67925169 Msa0745950:CDS 55.0%
GTCACCCTTCCCTGACAAGA+TGG + chr5_1:67925385-67925404 Msa0745950:CDS 55.0%
CGGTTCCATCTTGTCAGGGA+AGG - chr5_1:67925393-67925412 None:intergenic 55.0%
GGTGAAGGAAGTGGAGCCAT+AGG - chr5_1:67925692-67925711 None:intergenic 55.0%
GAGGACGATGTTGAAGCCGG+CGG + chr5_1:67925887-67925906 Msa0745950:CDS 60.0%
GAGGACGATGTTGAAGCCGG+CGG + chr5_1:67925887-67925906 Msa0745950:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 67924893 67925946 67924893 ID=Msa0745950;Name=Msa0745950
chr5_1 mRNA 67924893 67925946 67924893 ID=Msa0745950-mRNA-1;Parent=Msa0745950;Name=Msa0745950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|272
chr5_1 exon 67924893 67925171 67924893 ID=Msa0745950-mRNA-1:exon:20249;Parent=Msa0745950-mRNA-1
chr5_1 exon 67925311 67925564 67925311 ID=Msa0745950-mRNA-1:exon:20250;Parent=Msa0745950-mRNA-1
chr5_1 exon 67925661 67925946 67925661 ID=Msa0745950-mRNA-1:exon:20251;Parent=Msa0745950-mRNA-1
chr5_1 CDS 67924893 67925171 67924893 ID=Msa0745950-mRNA-1:cds;Parent=Msa0745950-mRNA-1
chr5_1 CDS 67925311 67925564 67925311 ID=Msa0745950-mRNA-1:cds;Parent=Msa0745950-mRNA-1
chr5_1 CDS 67925661 67925946 67925661 ID=Msa0745950-mRNA-1:cds;Parent=Msa0745950-mRNA-1
Gene Sequence

>Msa0745950

ATGTCTTCATCATCATCAGCCGATACTAAAAAAGGAACATGGTCCAAAGAAGAAGATGAAATATTAAAAGCATATGTGGAAAACCATGGAACAAGAAATTGGAACGAGGTATCAAAAAATGCGGGGCTTATACGTTGCTGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTACAACCAGATGTGAAAAAGGGTCCATTTAGTGAAGAAGAAAAAACAAAAGTTTTTCAGTTCTATGAAAAGTTTGGTGAACTCAAATGGTCTAAGCTGGCTCAGGAGTTACCGGGAAGAAGCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAAAGAAAACTTGAAAAGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACCGGATGATGAGTTGAATAGTAGCCAACAAGTTGAGGATTCACAAGAAGATGAATCTAATATACCACAATTGAAATTTAGAAAATATCCATCAATTTTTGATGTCCCAAACATGTTCTACAATAATGTGGGAAGTACTTCAACATTGATTGATAGGGGTAGCATTATTGGAACTTCTCATATACCTATGGCTCCACTTCCTTCACCTATGATGCTTGGTGACTATCCTCAAATTCCACCACCTATGGAGACTCAGTATCATGGTGACTTTATGGATCCAGATTTTTGGTTACACAACAGTTCATTAGACAATGACGATGCTGAAGCAAACCTCCTTGATGACTTCATGGATCCATGTCTATGTATTGACTTCAGTAATATGGAGGACGATGTTGAAGCCGGCGGTCGTTTATTTGACAGTAACTTGCATGACAAGATATAA
Protein sequence

>Msa0745950

MSSSSSADTKKGTWSKEEDEILKAYVENHGTRNWNEVSKNAGLIRCCKSCRLRWYNHLQPDVKKGPFSEEEKTKVFQFYEKFGELKWSKLAQELPGRSDNDIKNFWNARKRKLEKRGLSPFPDKMEPDDELNSSQQVEDSQEDESNIPQLKFRKYPSIFDVPNMFYNNVGSTSTLIDRGSIIGTSHIPMAPLPSPMMLGDYPQIPPPMETQYHGDFMDPDFWLHNSSLDNDDAEANLLDDFMDPCLCIDFSNMEDDVEAGGRLFDSNLHDKI*