Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747150 | XP_003622663.1 | 90.476 | 315 | 30 | 0 | 6 | 320 | 1 | 315 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747150 | sp|Q9ZSH7|Y4158_ARATH | 39.130 | 115 | 69 | 1 | 8 | 121 | 19 | 133 | 5.45e-22 | 94.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747150 | G7KVV4 | 90.476 | 315 | 30 | 0 | 6 | 320 | 1 | 315 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0747150 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747150 | MtrunA17_Chr7g0233521 | 90.942 | 276 | 25 | 0 | 33 | 308 | 1 | 276 | 0.0 | 527 |
| Msa0747150 | MtrunA17_Chr7g0233541 | 75.085 | 293 | 56 | 4 | 33 | 308 | 1 | 293 | 1.67e-158 | 444 |
| Msa0747150 | MtrunA17_Chr7g0233561 | 66.149 | 322 | 90 | 5 | 5 | 308 | 5 | 325 | 7.39e-148 | 419 |
| Msa0747150 | MtrunA17_Chr3g0131891 | 64.907 | 322 | 88 | 6 | 3 | 308 | 4 | 316 | 7.07e-143 | 406 |
| Msa0747150 | MtrunA17_Chr7g0233531 | 64.948 | 291 | 72 | 5 | 33 | 308 | 1 | 276 | 5.06e-127 | 364 |
| Msa0747150 | MtrunA17_Chr7g0233571 | 63.256 | 215 | 62 | 1 | 10 | 207 | 2 | 216 | 2.01e-94 | 279 |
| Msa0747150 | MtrunA17_Chr8g0390841 | 37.049 | 305 | 157 | 6 | 16 | 295 | 37 | 331 | 1.16e-52 | 181 |
| Msa0747150 | MtrunA17_Chr1g0163071 | 34.098 | 305 | 155 | 7 | 33 | 302 | 1 | 294 | 1.02e-47 | 162 |
| Msa0747150 | MtrunA17_Chr1g0208771 | 33.110 | 299 | 156 | 7 | 34 | 302 | 13 | 297 | 7.03e-47 | 164 |
| Msa0747150 | MtrunA17_Chr3g0103181 | 33.887 | 301 | 156 | 11 | 11 | 294 | 5 | 279 | 2.26e-40 | 142 |
| Msa0747150 | MtrunA17_Chr1g0163251 | 33.673 | 294 | 169 | 11 | 18 | 301 | 9 | 286 | 1.09e-34 | 130 |
| Msa0747150 | MtrunA17_Chr1g0163181 | 32.632 | 285 | 167 | 7 | 27 | 293 | 14 | 291 | 1.91e-34 | 130 |
| Msa0747150 | MtrunA17_Chr1g0163231 | 30.303 | 297 | 164 | 9 | 15 | 293 | 6 | 277 | 3.80e-33 | 124 |
| Msa0747150 | MtrunA17_Chr1g0171611 | 31.010 | 287 | 163 | 7 | 15 | 293 | 6 | 265 | 2.50e-32 | 121 |
| Msa0747150 | MtrunA17_Chr1g0163261 | 31.529 | 314 | 160 | 10 | 15 | 302 | 6 | 290 | 3.42e-31 | 119 |
| Msa0747150 | MtrunA17_Chr1g0163221 | 30.795 | 302 | 178 | 8 | 10 | 294 | 3 | 290 | 1.19e-30 | 118 |
| Msa0747150 | MtrunA17_Chr3g0103191 | 50.000 | 106 | 51 | 1 | 11 | 116 | 5 | 108 | 2.08e-30 | 115 |
| Msa0747150 | MtrunA17_Chr3g0103151 | 50.000 | 102 | 49 | 1 | 15 | 116 | 9 | 108 | 8.56e-29 | 108 |
| Msa0747150 | MtrunA17_Chr4g0067431 | 29.139 | 302 | 188 | 7 | 16 | 294 | 13 | 311 | 1.18e-28 | 112 |
| Msa0747150 | MtrunA17_Chr3g0103171 | 29.197 | 274 | 167 | 7 | 34 | 294 | 6 | 265 | 2.72e-28 | 110 |
| Msa0747150 | MtrunA17_Chr5g0419201 | 47.475 | 99 | 52 | 0 | 18 | 116 | 16 | 114 | 3.83e-28 | 107 |
| Msa0747150 | MtrunA17_Chr5g0429931 | 27.473 | 273 | 152 | 7 | 34 | 298 | 11 | 245 | 6.76e-26 | 103 |
| Msa0747150 | MtrunA17_Chr1g0163201 | 30.389 | 283 | 160 | 10 | 34 | 295 | 19 | 285 | 2.73e-25 | 104 |
| Msa0747150 | MtrunA17_Chr3g0077451 | 27.174 | 276 | 144 | 7 | 32 | 298 | 10 | 237 | 5.49e-25 | 100 |
| Msa0747150 | MtrunA17_Chr3g0077411 | 27.397 | 292 | 172 | 8 | 16 | 298 | 260 | 520 | 4.40e-24 | 102 |
| Msa0747150 | MtrunA17_Chr3g0077411 | 23.810 | 273 | 155 | 7 | 18 | 290 | 25 | 244 | 2.38e-18 | 85.5 |
| Msa0747150 | MtrunA17_Chr6g0467351 | 40.769 | 130 | 68 | 2 | 16 | 136 | 13 | 142 | 7.66e-23 | 94.7 |
| Msa0747150 | MtrunA17_Chr1g0154131 | 28.205 | 273 | 179 | 7 | 29 | 287 | 193 | 462 | 8.47e-23 | 98.6 |
| Msa0747150 | MtrunA17_Chr1g0154161 | 25.256 | 293 | 211 | 5 | 16 | 303 | 28 | 317 | 5.26e-21 | 91.7 |
| Msa0747150 | MtrunA17_Chr4g0033961 | 40.952 | 105 | 60 | 1 | 18 | 120 | 6 | 110 | 1.80e-20 | 91.3 |
| Msa0747150 | MtrunA17_Chr4g0033961 | 33.835 | 133 | 80 | 4 | 170 | 300 | 267 | 393 | 5.55e-14 | 72.0 |
| Msa0747150 | MtrunA17_Chr1g0163131 | 30.033 | 303 | 180 | 10 | 11 | 291 | 11 | 303 | 2.98e-20 | 89.4 |
| Msa0747150 | MtrunA17_Chr1g0163101 | 38.298 | 141 | 75 | 3 | 14 | 154 | 13 | 141 | 3.35e-20 | 86.3 |
| Msa0747150 | MtrunA17_Chr3g0103201 | 29.741 | 232 | 141 | 7 | 73 | 294 | 1 | 220 | 4.29e-20 | 87.0 |
| Msa0747150 | MtrunA17_Chr1g0154041 | 25.077 | 323 | 167 | 7 | 32 | 287 | 29 | 343 | 4.39e-20 | 90.9 |
| Msa0747150 | MtrunA17_Chr1g0154171 | 25.309 | 324 | 190 | 8 | 19 | 294 | 23 | 342 | 4.85e-20 | 89.4 |
| Msa0747150 | MtrunA17_Chr1g0163191 | 46.667 | 90 | 46 | 1 | 27 | 116 | 14 | 101 | 7.02e-20 | 85.1 |
| Msa0747150 | MtrunA17_Chr1g0162441 | 39.394 | 99 | 60 | 0 | 18 | 116 | 7 | 105 | 8.18e-20 | 89.4 |
| Msa0747150 | MtrunA17_Chr1g0162441 | 29.861 | 144 | 94 | 3 | 170 | 312 | 272 | 409 | 1.24e-13 | 71.2 |
| Msa0747150 | MtrunA17_Chr1g0154071 | 24.189 | 339 | 194 | 10 | 19 | 300 | 157 | 489 | 1.26e-19 | 89.4 |
| Msa0747150 | MtrunA17_Chr1g0163241 | 48.193 | 83 | 41 | 1 | 34 | 116 | 23 | 103 | 6.63e-19 | 82.4 |
| Msa0747150 | MtrunA17_Chr1g0154191 | 25.072 | 347 | 187 | 8 | 11 | 293 | 15 | 352 | 2.71e-18 | 84.7 |
| Msa0747150 | MtrunA17_Chr3g0077461 | 28.205 | 273 | 142 | 8 | 18 | 286 | 237 | 459 | 5.29e-18 | 84.3 |
| Msa0747150 | MtrunA17_Chr3g0077461 | 34.884 | 86 | 56 | 0 | 34 | 119 | 23 | 108 | 1.78e-15 | 76.6 |
| Msa0747150 | MtrunA17_Chr1g0163121 | 39.837 | 123 | 61 | 3 | 32 | 154 | 9 | 118 | 5.68e-18 | 79.3 |
| Msa0747150 | MtrunA17_Chr1g0163061 | 42.857 | 105 | 59 | 1 | 16 | 119 | 13 | 117 | 7.81e-18 | 82.0 |
| Msa0747150 | MtrunA17_Chr3g0077421 | 27.642 | 246 | 122 | 8 | 62 | 298 | 1 | 199 | 2.34e-17 | 79.0 |
| Msa0747150 | MtrunA17_Chr3g0077441 | 27.642 | 246 | 122 | 8 | 62 | 298 | 1 | 199 | 2.34e-17 | 79.0 |
| Msa0747150 | MtrunA17_Chr3g0077431 | 26.829 | 246 | 123 | 6 | 62 | 298 | 1 | 198 | 8.97e-17 | 77.4 |
| Msa0747150 | MtrunA17_Chr3g0077381 | 30.508 | 118 | 77 | 1 | 32 | 144 | 34 | 151 | 1.90e-15 | 76.6 |
| Msa0747150 | MtrunA17_Chr3g0077381 | 30.833 | 120 | 82 | 1 | 12 | 130 | 240 | 359 | 1.02e-13 | 71.6 |
| Msa0747150 | MtrunA17_Chr1g0162411 | 36.364 | 99 | 61 | 1 | 18 | 116 | 7 | 103 | 5.15e-15 | 75.5 |
| Msa0747150 | MtrunA17_Chr4g0009491 | 31.667 | 120 | 81 | 1 | 12 | 130 | 218 | 337 | 7.89e-15 | 74.7 |
| Msa0747150 | MtrunA17_Chr4g0009491 | 30.631 | 111 | 72 | 1 | 32 | 137 | 11 | 121 | 1.73e-14 | 73.6 |
| Msa0747150 | MtrunA17_Chr1g0163141 | 35.593 | 118 | 73 | 2 | 32 | 149 | 9 | 123 | 8.89e-15 | 71.6 |
| Msa0747150 | MtrunA17_Chr6g0476181 | 46.429 | 84 | 42 | 2 | 33 | 116 | 1 | 81 | 5.75e-14 | 68.6 |
| Msa0747150 | MtrunA17_Chr1g0162161 | 34.426 | 122 | 67 | 3 | 33 | 154 | 3 | 111 | 6.67e-14 | 68.6 |
| Msa0747150 | MtrunA17_Chr1g0154101 | 26.702 | 191 | 118 | 4 | 19 | 188 | 184 | 373 | 7.07e-14 | 72.4 |
| Msa0747150 | MtrunA17_Chr1g0154101 | 30.667 | 150 | 94 | 2 | 16 | 159 | 23 | 168 | 9.95e-13 | 68.9 |
| Msa0747150 | MtrunA17_Chr1g0154101 | 33.333 | 135 | 81 | 4 | 159 | 287 | 463 | 594 | 1.53e-11 | 65.5 |
| Msa0747150 | MtrunA17_Chr1g0163081 | 36.923 | 130 | 67 | 5 | 33 | 162 | 5 | 119 | 7.84e-14 | 67.8 |
| Msa0747150 | MtrunA17_Chr3g0077361 | 23.913 | 276 | 137 | 9 | 18 | 282 | 40 | 253 | 1.11e-12 | 68.6 |
| Msa0747150 | MtrunA17_Chr1g0154151 | 30.769 | 169 | 85 | 3 | 21 | 189 | 14 | 150 | 4.37e-12 | 65.9 |
| Msa0747150 | MtrunA17_Chr1g0154251 | 35.556 | 90 | 58 | 0 | 19 | 108 | 27 | 116 | 6.85e-12 | 66.2 |
| Msa0747150 | MtrunA17_Chr1g0154211 | 33.673 | 98 | 64 | 1 | 11 | 108 | 16 | 112 | 2.06e-11 | 64.3 |
| Msa0747150 | MtrunA17_Chr1g0154241 | 30.657 | 137 | 91 | 2 | 31 | 163 | 34 | 170 | 3.67e-11 | 62.8 |
| Msa0747150 | MtrunA17_Chr1g0163161 | 35.897 | 117 | 61 | 4 | 46 | 162 | 1 | 103 | 6.03e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747150 | AT4G01580.1 | 39.130 | 115 | 69 | 1 | 8 | 121 | 19 | 133 | 5.54e-23 | 94.4 |
| Msa0747150 | AT1G49475.1 | 44.660 | 103 | 56 | 1 | 17 | 119 | 33 | 134 | 1.94e-22 | 93.2 |
| Msa0747150 | AT3G18990.1 | 44.444 | 99 | 55 | 0 | 18 | 116 | 6 | 104 | 3.41e-22 | 95.5 |
| Msa0747150 | AT3G18990.1 | 29.221 | 154 | 101 | 3 | 142 | 295 | 191 | 336 | 8.68e-13 | 68.6 |
| Msa0747150 | AT3G18990.2 | 44.444 | 99 | 55 | 0 | 18 | 116 | 6 | 104 | 5.33e-22 | 95.5 |
| Msa0747150 | AT3G18990.2 | 29.299 | 157 | 103 | 3 | 142 | 298 | 191 | 339 | 5.33e-13 | 69.3 |
| Msa0747150 | AT3G18960.2 | 38.261 | 115 | 70 | 1 | 8 | 121 | 19 | 133 | 7.87e-22 | 91.7 |
| Msa0747150 | AT3G18960.1 | 38.261 | 115 | 70 | 1 | 8 | 121 | 19 | 133 | 1.05e-21 | 91.7 |
| Msa0747150 | AT3G18960.3 | 43.182 | 88 | 50 | 0 | 34 | 121 | 9 | 96 | 6.57e-18 | 80.1 |
| Msa0747150 | AT1G49480.3 | 31.746 | 126 | 80 | 2 | 170 | 295 | 102 | 221 | 7.84e-14 | 70.1 |
| Msa0747150 | AT1G49480.1 | 31.746 | 126 | 80 | 2 | 170 | 295 | 102 | 221 | 7.84e-14 | 70.1 |
| Msa0747150 | AT1G49480.2 | 31.746 | 126 | 80 | 2 | 170 | 295 | 102 | 221 | 7.84e-14 | 70.1 |
Find 49 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTTAAATGAAGGAATT+TGG | 0.170862 | 5_1:+70798937 | Msa0747150:CDS |
| TGCAAAATGGAAATTAAATT+TGG | 0.194062 | 5_1:+70797974 | Msa0747150:CDS |
| GATCAAAATGTGGTCCTTTA+AGG | 0.199640 | 5_1:-70798986 | None:intergenic |
| TATTTCTCCACAAACTTTCT+TGG | 0.217927 | 5_1:-70797906 | None:intergenic |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 5_1:+70797909 | Msa0747150:CDS |
| CTAATCAGGATGGCCCTTAA+AGG | 0.293814 | 5_1:+70798972 | Msa0747150:CDS |
| CGTGGAACACCGATTTCTTA+TGG | 0.302917 | 5_1:+70798483 | Msa0747150:CDS |
| GAATGGATAATTTATCTCTA+AGG | 0.305393 | 5_1:-70798135 | None:intergenic |
| CCAAAGAGTTGCAGCTAAAA+AGG | 0.311285 | 5_1:+70798157 | Msa0747150:CDS |
| TTCCATCAACCACGTGAAAT+AGG | 0.327923 | 5_1:+70798221 | Msa0747150:CDS |
| AGACTCCAAATGGTGCAAAA+TGG | 0.337543 | 5_1:+70797961 | Msa0747150:CDS |
| CTTTAAGGGCCATCCTGATT+AGG | 0.340540 | 5_1:-70798971 | None:intergenic |
| ATCCTGATTAGGTACTTTGC+AGG | 0.384916 | 5_1:-70798960 | None:intergenic |
| TGGTAATAGACACTTTGATT+TGG | 0.391800 | 5_1:+70798890 | Msa0747150:CDS |
| GGCAAGGTATGGTTTGAAAA+AGG | 0.397029 | 5_1:+70798008 | Msa0747150:CDS |
| CAGAATATACCATGTATGTT+TGG | 0.402598 | 5_1:+70798870 | Msa0747150:intron |
| TTCCTATTTCACGTGGTTGA+TGG | 0.411563 | 5_1:-70798223 | None:intergenic |
| GTTTATTTGTTGTTAAATGA+AGG | 0.421453 | 5_1:+70798930 | Msa0747150:CDS |
| GGCCTGCAAAGTACCTAATC+AGG | 0.423211 | 5_1:+70798958 | Msa0747150:CDS |
| ATCAAAATGTGGTCCTTTAA+GGG | 0.426344 | 5_1:-70798985 | None:intergenic |
| GATGATGCCAAGAAAGTTTG+TGG | 0.440968 | 5_1:+70797899 | Msa0747150:intron |
| GATATTTGAAAAGCAGAAGA+TGG | 0.469802 | 5_1:-70798070 | None:intergenic |
| AGCAACTTACCATAAGAAAT+CGG | 0.473971 | 5_1:-70798492 | None:intergenic |
| GAGAAGCGTCTTCTTTCACT+TGG | 0.480156 | 5_1:-70799252 | None:intergenic |
| TTTGTGGAGAAATATGGAAA+AGG | 0.487637 | 5_1:+70797915 | Msa0747150:CDS |
| TGAAGTTGAGAAATTGCAAA+AGG | 0.487851 | 5_1:+70798259 | Msa0747150:CDS |
| ATATATCTAAAGACTCCAAA+TGG | 0.494837 | 5_1:+70797951 | Msa0747150:CDS |
| TTAGCTGCAACTCTTTGGAA+TGG | 0.508092 | 5_1:-70798152 | None:intergenic |
| TCTAAAGATGTGAACAATGA+AGG | 0.509907 | 5_1:-70799099 | None:intergenic |
| AAGGACAACAACTTGAAAGT+TGG | 0.541070 | 5_1:+70799035 | Msa0747150:CDS |
| TGATCTCACAACTGGGTGGA+AGG | 0.545838 | 5_1:+70799004 | Msa0747150:CDS |
| CGCATGACAACAACAAAGGA+TGG | 0.548509 | 5_1:-70798451 | None:intergenic |
| CTTGCTCAAAATCTTCATGA+AGG | 0.562390 | 5_1:+70797022 | Msa0747150:CDS |
| TTTGATTTGGATAAGAAGAG+AGG | 0.576081 | 5_1:+70798903 | Msa0747150:CDS |
| CCACGTGAAATAGGAAGCAA+TGG | 0.577300 | 5_1:+70798230 | Msa0747150:CDS |
| AGAAGCGTCTTCTTTCACTT+GGG | 0.584312 | 5_1:-70799251 | None:intergenic |
| GATCATCACTCTCTAGCTGA+TGG | 0.591483 | 5_1:+70798047 | Msa0747150:CDS |
| GTGAAAGAAGACGCTTCTCA+AGG | 0.597202 | 5_1:+70799256 | Msa0747150:CDS |
| GTAGCAACTTTGCATCATGC+TGG | 0.604292 | 5_1:+70798281 | Msa0747150:CDS |
| CCATTGCTTCCTATTTCACG+TGG | 0.606111 | 5_1:-70798230 | None:intergenic |
| TAGCAAGCAGTACTCACTCA+TGG | 0.607806 | 5_1:+70796952 | None:intergenic |
| TGCAAAGTACCTAATCAGGA+TGG | 0.618749 | 5_1:+70798962 | Msa0747150:CDS |
| TGGTTGATGGAATTCAAAAG+AGG | 0.624709 | 5_1:-70798210 | None:intergenic |
| TGTCTATTACCAAACATACA+TGG | 0.629066 | 5_1:-70798879 | None:intergenic |
| TGGGTGGAAGGCATTTGCAA+AGG | 0.645012 | 5_1:+70799016 | Msa0747150:CDS |
| TGTCATGCGTGCATCATACG+TGG | 0.677837 | 5_1:+70798465 | Msa0747150:CDS |
| TGCACGCATGACAACAACAA+AGG | 0.693553 | 5_1:-70798455 | None:intergenic |
| CCAGTTGTGAGATCAAAATG+TGG | 0.701103 | 5_1:-70798996 | None:intergenic |
| CATGCTGGCAGAGAGTCCAA+AGG | 0.714363 | 5_1:+70798296 | Msa0747150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGTTTTAAAATAAAAAATTA+AGG | - | chr5_1:70797440-70797459 | None:intergenic | 10.0% |
| !!! | GGTTTTAAAATAAAAAATTA+AGG | - | chr5_1:70797440-70797459 | None:intergenic | 10.0% |
| !! | ATTATCACATAAATGTTTAT+TGG | + | chr5_1:70798709-70798728 | Msa0747150:intron | 15.0% |
| !! | ATTATCACATAAATGTTTAT+TGG | + | chr5_1:70798709-70798728 | Msa0747150:intron | 15.0% |
| !! | TAAGGAAAAAAAGTTCAAAT+TGG | - | chr5_1:70797422-70797441 | None:intergenic | 20.0% |
| !! | ATAATTAAGAAAAATGCACA+TGG | + | chr5_1:70797576-70797595 | Msa0747150:intron | 20.0% |
| !!! | ACAAATTTTTTTCCTCAAAA+GGG | + | chr5_1:70797627-70797646 | Msa0747150:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr5_1:70797974-70797993 | Msa0747150:CDS | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr5_1:70797987-70798006 | Msa0747150:CDS | 20.0% |
| !! | TATCTGATTGAATAATTGTT+AGG | - | chr5_1:70798690-70798709 | None:intergenic | 20.0% |
| !! | AAAAATTAGAAAGTTCTTGT+TGG | - | chr5_1:70798818-70798837 | None:intergenic | 20.0% |
| !!! | CATTTATCTTTTCTTTTGAT+TGG | + | chr5_1:70798847-70798866 | Msa0747150:intron | 20.0% |
| !!! | GTTTATTTGTTGTTAAATGA+AGG | + | chr5_1:70798930-70798949 | Msa0747150:CDS | 20.0% |
| !! | TAAGGAAAAAAAGTTCAAAT+TGG | - | chr5_1:70797422-70797441 | None:intergenic | 20.0% |
| !! | ATAATTAAGAAAAATGCACA+TGG | + | chr5_1:70797576-70797595 | Msa0747150:intron | 20.0% |
| !!! | ACAAATTTTTTTCCTCAAAA+GGG | + | chr5_1:70797627-70797646 | Msa0747150:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr5_1:70797974-70797993 | Msa0747150:CDS | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr5_1:70797987-70798006 | Msa0747150:CDS | 20.0% |
| !! | TATCTGATTGAATAATTGTT+AGG | - | chr5_1:70798690-70798709 | None:intergenic | 20.0% |
| !! | AAAAATTAGAAAGTTCTTGT+TGG | - | chr5_1:70798818-70798837 | None:intergenic | 20.0% |
| !!! | CATTTATCTTTTCTTTTGAT+TGG | + | chr5_1:70798847-70798866 | Msa0747150:intron | 20.0% |
| !!! | GTTTATTTGTTGTTAAATGA+AGG | + | chr5_1:70798930-70798949 | Msa0747150:CDS | 20.0% |
| ! | CAAGTATTATCTTGAAAAAG+CGG | - | chr5_1:70797006-70797025 | None:intergenic | 25.0% |
| ! | AATAAGAGAATCTAAGTCAA+AGG | - | chr5_1:70797060-70797079 | None:intergenic | 25.0% |
| ! | TTATTATGACACAAGTTTGT+TGG | + | chr5_1:70797180-70797199 | Msa0747150:intron | 25.0% |
| ! | TTAGTTGAGATAAGATCTAT+GGG | - | chr5_1:70797262-70797281 | None:intergenic | 25.0% |
| ! | AAAAAAAATATGTCGCTACA+TGG | + | chr5_1:70797388-70797407 | Msa0747150:intron | 25.0% |
| ! | TGCATATGAGCTTATATTTA+GGG | + | chr5_1:70797604-70797623 | Msa0747150:intron | 25.0% |
| !!! | GACAAATTTTTTTCCTCAAA+AGG | + | chr5_1:70797626-70797645 | Msa0747150:intron | 25.0% |
| !!! | CAAATTTTTTTCCTCAAAAG+GGG | + | chr5_1:70797628-70797647 | Msa0747150:intron | 25.0% |
| !! | TGTAAATAACAATTCGAGTT+TGG | + | chr5_1:70797654-70797673 | Msa0747150:intron | 25.0% |
| !! | AATTACTTAGTCTTCTAATC+TGG | - | chr5_1:70797796-70797815 | None:intergenic | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | + | chr5_1:70797951-70797970 | Msa0747150:CDS | 25.0% |
| ! | GAATGGATAATTTATCTCTA+AGG | - | chr5_1:70798138-70798157 | None:intergenic | 25.0% |
| ! | TGCAAAATTTGAACACAATA+AGG | - | chr5_1:70798362-70798381 | None:intergenic | 25.0% |
| !! | TTATTGTGTTCAAATTTTGC+AGG | + | chr5_1:70798361-70798380 | Msa0747150:intron | 25.0% |
| !! | TATTGTGTTCAAATTTTGCA+GGG | + | chr5_1:70798362-70798381 | Msa0747150:intron | 25.0% |
| ! | TGTTGTTAAATGAAGGAATT+TGG | + | chr5_1:70798937-70798956 | Msa0747150:CDS | 25.0% |
| ! | CAAGTATTATCTTGAAAAAG+CGG | - | chr5_1:70797006-70797025 | None:intergenic | 25.0% |
| ! | AATAAGAGAATCTAAGTCAA+AGG | - | chr5_1:70797060-70797079 | None:intergenic | 25.0% |
| ! | TTATTATGACACAAGTTTGT+TGG | + | chr5_1:70797180-70797199 | Msa0747150:intron | 25.0% |
| ! | TTAGTTGAGATAAGATCTAT+GGG | - | chr5_1:70797262-70797281 | None:intergenic | 25.0% |
| ! | AAAAAAAATATGTCGCTACA+TGG | + | chr5_1:70797388-70797407 | Msa0747150:intron | 25.0% |
| ! | TGCATATGAGCTTATATTTA+GGG | + | chr5_1:70797604-70797623 | Msa0747150:intron | 25.0% |
| !!! | GACAAATTTTTTTCCTCAAA+AGG | + | chr5_1:70797626-70797645 | Msa0747150:intron | 25.0% |
| !!! | CAAATTTTTTTCCTCAAAAG+GGG | + | chr5_1:70797628-70797647 | Msa0747150:intron | 25.0% |
| !! | TGTAAATAACAATTCGAGTT+TGG | + | chr5_1:70797654-70797673 | Msa0747150:intron | 25.0% |
| !! | AATTACTTAGTCTTCTAATC+TGG | - | chr5_1:70797796-70797815 | None:intergenic | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | + | chr5_1:70797951-70797970 | Msa0747150:CDS | 25.0% |
| ! | GAATGGATAATTTATCTCTA+AGG | - | chr5_1:70798138-70798157 | None:intergenic | 25.0% |
| ! | TGCAAAATTTGAACACAATA+AGG | - | chr5_1:70798362-70798381 | None:intergenic | 25.0% |
| !! | TTATTGTGTTCAAATTTTGC+AGG | + | chr5_1:70798361-70798380 | Msa0747150:intron | 25.0% |
| !! | TATTGTGTTCAAATTTTGCA+GGG | + | chr5_1:70798362-70798381 | Msa0747150:intron | 25.0% |
| ! | TGTTGTTAAATGAAGGAATT+TGG | + | chr5_1:70798937-70798956 | Msa0747150:CDS | 25.0% |
| ATTATCTTGAAAAAGCGGAT+TGG | - | chr5_1:70797001-70797020 | None:intergenic | 30.0% | |
| TTGAGTTAGATTCTTTGTTC+AGG | + | chr5_1:70797093-70797112 | Msa0747150:intron | 30.0% | |
| GTTAGTTGAGATAAGATCTA+TGG | - | chr5_1:70797263-70797282 | None:intergenic | 30.0% | |
| AACAAATTGCCGAAATTGTT+AGG | + | chr5_1:70797280-70797299 | Msa0747150:intron | 30.0% | |
| AACTCACACACATAATTAAG+TGG | - | chr5_1:70797329-70797348 | None:intergenic | 30.0% | |
| AAGTTAATTACTTGCAGGTT+TGG | - | chr5_1:70797461-70797480 | None:intergenic | 30.0% | |
| AAACCTGCAAGTAATTAACT+TGG | + | chr5_1:70797460-70797479 | Msa0747150:intron | 30.0% | |
| AACCTGCAAGTAATTAACTT+GGG | + | chr5_1:70797461-70797480 | Msa0747150:intron | 30.0% | |
| TAGCATGTATCATGACATAT+TGG | + | chr5_1:70797489-70797508 | Msa0747150:intron | 30.0% | |
| TGTTAGATAGCATTGTTAGA+TGG | - | chr5_1:70797548-70797567 | None:intergenic | 30.0% | |
| TCTAACAATGCTATCTAACA+AGG | + | chr5_1:70797548-70797567 | Msa0747150:intron | 30.0% | |
| CTAACAATGCTATCTAACAA+GGG | + | chr5_1:70797549-70797568 | Msa0747150:intron | 30.0% | |
| CTGCATATGAGCTTATATTT+AGG | + | chr5_1:70797603-70797622 | Msa0747150:intron | 30.0% | |
| ! | TTGGTCCACTAATTTTATGA+TGG | + | chr5_1:70797673-70797692 | Msa0747150:intron | 30.0% |
| CAAGTCCATCATAAAATTAG+TGG | - | chr5_1:70797681-70797700 | None:intergenic | 30.0% | |
| GTTTCATTAGGCTACAAATT+TGG | - | chr5_1:70797708-70797727 | None:intergenic | 30.0% | |
| TTTGTAGCCTAATGAAACTA+TGG | + | chr5_1:70797710-70797729 | Msa0747150:intron | 30.0% | |
| TTGTAGCCTAATGAAACTAT+GGG | + | chr5_1:70797711-70797730 | Msa0747150:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | - | chr5_1:70797909-70797928 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | + | chr5_1:70797909-70797928 | Msa0747150:CDS | 30.0% | |
| TTTGTGGAGAAATATGGAAA+AGG | + | chr5_1:70797915-70797934 | Msa0747150:CDS | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr5_1:70797969-70797988 | None:intergenic | 30.0% |
| GATATTTGAAAAGCAGAAGA+TGG | - | chr5_1:70798073-70798092 | None:intergenic | 30.0% | |
| TGAAGTTGAGAAATTGCAAA+AGG | + | chr5_1:70798259-70798278 | Msa0747150:CDS | 30.0% | |
| GACTCAATCTTATATACCTT+TGG | - | chr5_1:70798315-70798334 | None:intergenic | 30.0% | |
| AGCAACTTACCATAAGAAAT+CGG | - | chr5_1:70798495-70798514 | None:intergenic | 30.0% | |
| CAGAATATACCATGTATGTT+TGG | + | chr5_1:70798870-70798889 | Msa0747150:intron | 30.0% | |
| TGTCTATTACCAAACATACA+TGG | - | chr5_1:70798882-70798901 | None:intergenic | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | + | chr5_1:70798890-70798909 | Msa0747150:CDS | 30.0% | |
| !! | TTTGATTTGGATAAGAAGAG+AGG | + | chr5_1:70798903-70798922 | Msa0747150:CDS | 30.0% |
| ATCAAAATGTGGTCCTTTAA+GGG | - | chr5_1:70798988-70799007 | None:intergenic | 30.0% | |
| TCTAAAGATGTGAACAATGA+AGG | - | chr5_1:70799102-70799121 | None:intergenic | 30.0% | |
| ATTATCTTGAAAAAGCGGAT+TGG | - | chr5_1:70797001-70797020 | None:intergenic | 30.0% | |
| TTGAGTTAGATTCTTTGTTC+AGG | + | chr5_1:70797093-70797112 | Msa0747150:intron | 30.0% | |
| GTTAGTTGAGATAAGATCTA+TGG | - | chr5_1:70797263-70797282 | None:intergenic | 30.0% | |
| AACAAATTGCCGAAATTGTT+AGG | + | chr5_1:70797280-70797299 | Msa0747150:intron | 30.0% | |
| AACTCACACACATAATTAAG+TGG | - | chr5_1:70797329-70797348 | None:intergenic | 30.0% | |
| AAGTTAATTACTTGCAGGTT+TGG | - | chr5_1:70797461-70797480 | None:intergenic | 30.0% | |
| AAACCTGCAAGTAATTAACT+TGG | + | chr5_1:70797460-70797479 | Msa0747150:intron | 30.0% | |
| AACCTGCAAGTAATTAACTT+GGG | + | chr5_1:70797461-70797480 | Msa0747150:intron | 30.0% | |
| TAGCATGTATCATGACATAT+TGG | + | chr5_1:70797489-70797508 | Msa0747150:intron | 30.0% | |
| TGTTAGATAGCATTGTTAGA+TGG | - | chr5_1:70797548-70797567 | None:intergenic | 30.0% | |
| TCTAACAATGCTATCTAACA+AGG | + | chr5_1:70797548-70797567 | Msa0747150:intron | 30.0% | |
| CTAACAATGCTATCTAACAA+GGG | + | chr5_1:70797549-70797568 | Msa0747150:intron | 30.0% | |
| CTGCATATGAGCTTATATTT+AGG | + | chr5_1:70797603-70797622 | Msa0747150:intron | 30.0% | |
| ! | TTGGTCCACTAATTTTATGA+TGG | + | chr5_1:70797673-70797692 | Msa0747150:intron | 30.0% |
| CAAGTCCATCATAAAATTAG+TGG | - | chr5_1:70797681-70797700 | None:intergenic | 30.0% | |
| GTTTCATTAGGCTACAAATT+TGG | - | chr5_1:70797708-70797727 | None:intergenic | 30.0% | |
| TTTGTAGCCTAATGAAACTA+TGG | + | chr5_1:70797710-70797729 | Msa0747150:intron | 30.0% | |
| TTGTAGCCTAATGAAACTAT+GGG | + | chr5_1:70797711-70797730 | Msa0747150:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | - | chr5_1:70797909-70797928 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | + | chr5_1:70797909-70797928 | Msa0747150:CDS | 30.0% | |
| TTTGTGGAGAAATATGGAAA+AGG | + | chr5_1:70797915-70797934 | Msa0747150:CDS | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr5_1:70797969-70797988 | None:intergenic | 30.0% |
| GATATTTGAAAAGCAGAAGA+TGG | - | chr5_1:70798073-70798092 | None:intergenic | 30.0% | |
| TGAAGTTGAGAAATTGCAAA+AGG | + | chr5_1:70798259-70798278 | Msa0747150:CDS | 30.0% | |
| GACTCAATCTTATATACCTT+TGG | - | chr5_1:70798315-70798334 | None:intergenic | 30.0% | |
| AGCAACTTACCATAAGAAAT+CGG | - | chr5_1:70798495-70798514 | None:intergenic | 30.0% | |
| CAGAATATACCATGTATGTT+TGG | + | chr5_1:70798870-70798889 | Msa0747150:intron | 30.0% | |
| TGTCTATTACCAAACATACA+TGG | - | chr5_1:70798882-70798901 | None:intergenic | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | + | chr5_1:70798890-70798909 | Msa0747150:CDS | 30.0% | |
| !! | TTTGATTTGGATAAGAAGAG+AGG | + | chr5_1:70798903-70798922 | Msa0747150:CDS | 30.0% |
| ATCAAAATGTGGTCCTTTAA+GGG | - | chr5_1:70798988-70799007 | None:intergenic | 30.0% | |
| TCTAAAGATGTGAACAATGA+AGG | - | chr5_1:70799102-70799121 | None:intergenic | 30.0% | |
| CTTGCTCAAAATCTTCATGA+AGG | + | chr5_1:70797022-70797041 | Msa0747150:CDS | 35.0% | |
| !! | AGTTTGTTGGTCATAGTTTG+TGG | + | chr5_1:70797193-70797212 | Msa0747150:intron | 35.0% |
| ! | GTTTGTTGGTCATAGTTTGT+GGG | + | chr5_1:70797194-70797213 | Msa0747150:intron | 35.0% |
| TACCCAAGTTAATTACTTGC+AGG | - | chr5_1:70797466-70797485 | None:intergenic | 35.0% | |
| GACATATTGGACTACCAAAA+TGG | + | chr5_1:70797502-70797521 | Msa0747150:intron | 35.0% | |
| TATTGGACTACCAAAATGGA+AGG | + | chr5_1:70797506-70797525 | Msa0747150:intron | 35.0% | |
| ATTGGACTACCAAAATGGAA+GGG | + | chr5_1:70797507-70797526 | Msa0747150:intron | 35.0% | |
| ! | TATTTACAAGTCCCCTTTTG+AGG | - | chr5_1:70797642-70797661 | None:intergenic | 35.0% |
| TCATTAGGCTACAAATTTGG+TGG | - | chr5_1:70797705-70797724 | None:intergenic | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | + | chr5_1:70797992-70798011 | Msa0747150:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | + | chr5_1:70797997-70798016 | Msa0747150:CDS | 35.0% | |
| AGGTATGGTTTGAAAAAGGT+TGG | + | chr5_1:70798012-70798031 | Msa0747150:CDS | 35.0% | |
| ! | AGCTTTTCTCTTTTGACCAT+TGG | - | chr5_1:70798186-70798205 | None:intergenic | 35.0% |
| !! | TGGTTGATGGAATTCAAAAG+AGG | - | chr5_1:70798213-70798232 | None:intergenic | 35.0% |
| TATTTCCCGTTGATACCAAT+TGG | + | chr5_1:70798625-70798644 | Msa0747150:intron | 35.0% | |
| AAGAACCAATTGGTATCAAC+GGG | - | chr5_1:70798633-70798652 | None:intergenic | 35.0% | |
| CAAGAACCAATTGGTATCAA+CGG | - | chr5_1:70798634-70798653 | None:intergenic | 35.0% | |
| AAAGAATTTCCCAGCTCAAA+TGG | + | chr5_1:70798659-70798678 | Msa0747150:intron | 35.0% | |
| GATCAAAATGTGGTCCTTTA+AGG | - | chr5_1:70798989-70799008 | None:intergenic | 35.0% | |
| !! | CACATTTTGATCTCACAACT+GGG | + | chr5_1:70798997-70799016 | Msa0747150:CDS | 35.0% |
| AAGGACAACAACTTGAAAGT+TGG | + | chr5_1:70799035-70799054 | Msa0747150:CDS | 35.0% | |
| ATTGTTCAGCATCTCAAAGT+AGG | + | chr5_1:70799144-70799163 | Msa0747150:intron | 35.0% | |
| CTTGCTCAAAATCTTCATGA+AGG | + | chr5_1:70797022-70797041 | Msa0747150:CDS | 35.0% | |
| !! | AGTTTGTTGGTCATAGTTTG+TGG | + | chr5_1:70797193-70797212 | Msa0747150:intron | 35.0% |
| ! | GTTTGTTGGTCATAGTTTGT+GGG | + | chr5_1:70797194-70797213 | Msa0747150:intron | 35.0% |
| TACCCAAGTTAATTACTTGC+AGG | - | chr5_1:70797466-70797485 | None:intergenic | 35.0% | |
| GACATATTGGACTACCAAAA+TGG | + | chr5_1:70797502-70797521 | Msa0747150:intron | 35.0% | |
| TATTGGACTACCAAAATGGA+AGG | + | chr5_1:70797506-70797525 | Msa0747150:intron | 35.0% | |
| ATTGGACTACCAAAATGGAA+GGG | + | chr5_1:70797507-70797526 | Msa0747150:intron | 35.0% | |
| ! | TATTTACAAGTCCCCTTTTG+AGG | - | chr5_1:70797642-70797661 | None:intergenic | 35.0% |
| TCATTAGGCTACAAATTTGG+TGG | - | chr5_1:70797705-70797724 | None:intergenic | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | + | chr5_1:70797992-70798011 | Msa0747150:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | + | chr5_1:70797997-70798016 | Msa0747150:CDS | 35.0% | |
| AGGTATGGTTTGAAAAAGGT+TGG | + | chr5_1:70798012-70798031 | Msa0747150:CDS | 35.0% | |
| ! | AGCTTTTCTCTTTTGACCAT+TGG | - | chr5_1:70798186-70798205 | None:intergenic | 35.0% |
| !! | TGGTTGATGGAATTCAAAAG+AGG | - | chr5_1:70798213-70798232 | None:intergenic | 35.0% |
| TATTTCCCGTTGATACCAAT+TGG | + | chr5_1:70798625-70798644 | Msa0747150:intron | 35.0% | |
| AAGAACCAATTGGTATCAAC+GGG | - | chr5_1:70798633-70798652 | None:intergenic | 35.0% | |
| CAAGAACCAATTGGTATCAA+CGG | - | chr5_1:70798634-70798653 | None:intergenic | 35.0% | |
| AAAGAATTTCCCAGCTCAAA+TGG | + | chr5_1:70798659-70798678 | Msa0747150:intron | 35.0% | |
| GATCAAAATGTGGTCCTTTA+AGG | - | chr5_1:70798989-70799008 | None:intergenic | 35.0% | |
| !! | CACATTTTGATCTCACAACT+GGG | + | chr5_1:70798997-70799016 | Msa0747150:CDS | 35.0% |
| AAGGACAACAACTTGAAAGT+TGG | + | chr5_1:70799035-70799054 | Msa0747150:CDS | 35.0% | |
| ATTGTTCAGCATCTCAAAGT+AGG | + | chr5_1:70799144-70799163 | Msa0747150:intron | 35.0% | |
| GACGTCTGACCTAACAATTT+CGG | - | chr5_1:70797292-70797311 | None:intergenic | 40.0% | |
| ! | TATCAATCGCCCTTCCATTT+TGG | - | chr5_1:70797519-70797538 | None:intergenic | 40.0% |
| TGCAGTCCGTTTACTCAATT+TGG | + | chr5_1:70797738-70797757 | Msa0747150:intron | 40.0% | |
| AGTGGGCCAAATTGAGTAAA+CGG | - | chr5_1:70797747-70797766 | None:intergenic | 40.0% | |
| TTTACTCAATTTGGCCCACT+TGG | + | chr5_1:70797747-70797766 | Msa0747150:intron | 40.0% | |
| CTAACTTGACCAATCCAAGT+GGG | - | chr5_1:70797764-70797783 | None:intergenic | 40.0% | |
| !! | TTGGATTGGTCAAGTTAGGT+CGG | + | chr5_1:70797766-70797785 | Msa0747150:intron | 40.0% |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr5_1:70797899-70797918 | Msa0747150:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr5_1:70797961-70797980 | Msa0747150:CDS | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+AGG | + | chr5_1:70798008-70798027 | Msa0747150:CDS | 40.0% | |
| ! | TTAGCTGCAACTCTTTGGAA+TGG | - | chr5_1:70798155-70798174 | None:intergenic | 40.0% |
| !!! | CCTTTTTAGCTGCAACTCTT+TGG | - | chr5_1:70798160-70798179 | None:intergenic | 40.0% |
| CCAAAGAGTTGCAGCTAAAA+AGG | + | chr5_1:70798157-70798176 | Msa0747150:CDS | 40.0% | |
| TTCCATCAACCACGTGAAAT+AGG | + | chr5_1:70798221-70798240 | Msa0747150:CDS | 40.0% | |
| TTCCTATTTCACGTGGTTGA+TGG | - | chr5_1:70798226-70798245 | None:intergenic | 40.0% | |
| CTTTCTCGACAAGAACCAAT+TGG | - | chr5_1:70798643-70798662 | None:intergenic | 40.0% | |
| AATTTCCCAGCTCAAATGGA+GGG | + | chr5_1:70798663-70798682 | Msa0747150:intron | 40.0% | |
| ATCCTGATTAGGTACTTTGC+AGG | - | chr5_1:70798963-70798982 | None:intergenic | 40.0% | |
| ! | TGCAAAGTACCTAATCAGGA+TGG | + | chr5_1:70798962-70798981 | Msa0747150:CDS | 40.0% |
| CCAGTTGTGAGATCAAAATG+TGG | - | chr5_1:70798999-70799018 | None:intergenic | 40.0% | |
| !! | CCACATTTTGATCTCACAAC+TGG | + | chr5_1:70798996-70799015 | Msa0747150:CDS | 40.0% |
| !! | ATTTTGATCTCACAACTGGG+TGG | + | chr5_1:70799000-70799019 | Msa0747150:CDS | 40.0% |
| !! | AGAAGCGTCTTCTTTCACTT+GGG | - | chr5_1:70799254-70799273 | None:intergenic | 40.0% |
| GACGTCTGACCTAACAATTT+CGG | - | chr5_1:70797292-70797311 | None:intergenic | 40.0% | |
| ! | TATCAATCGCCCTTCCATTT+TGG | - | chr5_1:70797519-70797538 | None:intergenic | 40.0% |
| TGCAGTCCGTTTACTCAATT+TGG | + | chr5_1:70797738-70797757 | Msa0747150:intron | 40.0% | |
| AGTGGGCCAAATTGAGTAAA+CGG | - | chr5_1:70797747-70797766 | None:intergenic | 40.0% | |
| TTTACTCAATTTGGCCCACT+TGG | + | chr5_1:70797747-70797766 | Msa0747150:intron | 40.0% | |
| CTAACTTGACCAATCCAAGT+GGG | - | chr5_1:70797764-70797783 | None:intergenic | 40.0% | |
| !! | TTGGATTGGTCAAGTTAGGT+CGG | + | chr5_1:70797766-70797785 | Msa0747150:intron | 40.0% |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr5_1:70797899-70797918 | Msa0747150:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr5_1:70797961-70797980 | Msa0747150:CDS | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+AGG | + | chr5_1:70798008-70798027 | Msa0747150:CDS | 40.0% | |
| ! | TTAGCTGCAACTCTTTGGAA+TGG | - | chr5_1:70798155-70798174 | None:intergenic | 40.0% |
| !!! | CCTTTTTAGCTGCAACTCTT+TGG | - | chr5_1:70798160-70798179 | None:intergenic | 40.0% |
| CCAAAGAGTTGCAGCTAAAA+AGG | + | chr5_1:70798157-70798176 | Msa0747150:CDS | 40.0% | |
| TTCCATCAACCACGTGAAAT+AGG | + | chr5_1:70798221-70798240 | Msa0747150:CDS | 40.0% | |
| TTCCTATTTCACGTGGTTGA+TGG | - | chr5_1:70798226-70798245 | None:intergenic | 40.0% | |
| CTTTCTCGACAAGAACCAAT+TGG | - | chr5_1:70798643-70798662 | None:intergenic | 40.0% | |
| AATTTCCCAGCTCAAATGGA+GGG | + | chr5_1:70798663-70798682 | Msa0747150:intron | 40.0% | |
| ATCCTGATTAGGTACTTTGC+AGG | - | chr5_1:70798963-70798982 | None:intergenic | 40.0% | |
| ! | TGCAAAGTACCTAATCAGGA+TGG | + | chr5_1:70798962-70798981 | Msa0747150:CDS | 40.0% |
| CCAGTTGTGAGATCAAAATG+TGG | - | chr5_1:70798999-70799018 | None:intergenic | 40.0% | |
| !! | CCACATTTTGATCTCACAAC+TGG | + | chr5_1:70798996-70799015 | Msa0747150:CDS | 40.0% |
| !! | ATTTTGATCTCACAACTGGG+TGG | + | chr5_1:70799000-70799019 | Msa0747150:CDS | 40.0% |
| !! | AGAAGCGTCTTCTTTCACTT+GGG | - | chr5_1:70799254-70799273 | None:intergenic | 40.0% |
| GTAGCGACATAGATGAGTAG+AGG | - | chr5_1:70797235-70797254 | None:intergenic | 45.0% | |
| GTTAGGTCAGACGTCATGAT+CGG | + | chr5_1:70797297-70797316 | Msa0747150:intron | 45.0% | |
| TTAGGTCAGACGTCATGATC+GGG | + | chr5_1:70797298-70797317 | Msa0747150:intron | 45.0% | |
| AGCCTAATGAAACTATGGGC+TGG | + | chr5_1:70797715-70797734 | Msa0747150:intron | 45.0% | |
| CACCAGCCCATAGTTTCATT+AGG | - | chr5_1:70797720-70797739 | None:intergenic | 45.0% | |
| TCAATTTGGCCCACTTGGAT+TGG | + | chr5_1:70797752-70797771 | Msa0747150:intron | 45.0% | |
| CCTAACTTGACCAATCCAAG+TGG | - | chr5_1:70797765-70797784 | None:intergenic | 45.0% | |
| !! | CCACTTGGATTGGTCAAGTT+AGG | + | chr5_1:70797762-70797781 | Msa0747150:intron | 45.0% |
| ATTGGTCAAGTTAGGTCGGA+CGG | + | chr5_1:70797770-70797789 | Msa0747150:intron | 45.0% | |
| GATCATCACTCTCTAGCTGA+TGG | + | chr5_1:70798047-70798066 | Msa0747150:CDS | 45.0% | |
| GCAGCTAAAAAGGTCTCCAA+TGG | + | chr5_1:70798167-70798186 | Msa0747150:CDS | 45.0% | |
| CCATTGCTTCCTATTTCACG+TGG | - | chr5_1:70798233-70798252 | None:intergenic | 45.0% | |
| CCACGTGAAATAGGAAGCAA+TGG | + | chr5_1:70798230-70798249 | Msa0747150:CDS | 45.0% | |
| GTAGCAACTTTGCATCATGC+TGG | + | chr5_1:70798281-70798300 | Msa0747150:CDS | 45.0% | |
| CGCATGACAACAACAAAGGA+TGG | - | chr5_1:70798454-70798473 | None:intergenic | 45.0% | |
| TGCACGCATGACAACAACAA+AGG | - | chr5_1:70798458-70798477 | None:intergenic | 45.0% | |
| !! | CGTGGAACACCGATTTCTTA+TGG | + | chr5_1:70798483-70798502 | Msa0747150:CDS | 45.0% |
| ! | AACTACGTATGCACTGACGA+AGG | + | chr5_1:70798517-70798536 | Msa0747150:intron | 45.0% |
| GAATTTCCCAGCTCAAATGG+AGG | + | chr5_1:70798662-70798681 | Msa0747150:intron | 45.0% | |
| ! | CTTTAAGGGCCATCCTGATT+AGG | - | chr5_1:70798974-70798993 | None:intergenic | 45.0% |
| CTAATCAGGATGGCCCTTAA+AGG | + | chr5_1:70798972-70798991 | Msa0747150:CDS | 45.0% | |
| !! | GAGAAGCGTCTTCTTTCACT+TGG | - | chr5_1:70799255-70799274 | None:intergenic | 45.0% |
| GTGAAAGAAGACGCTTCTCA+AGG | + | chr5_1:70799256-70799275 | Msa0747150:CDS | 45.0% | |
| GTAGCGACATAGATGAGTAG+AGG | - | chr5_1:70797235-70797254 | None:intergenic | 45.0% | |
| GTTAGGTCAGACGTCATGAT+CGG | + | chr5_1:70797297-70797316 | Msa0747150:intron | 45.0% | |
| TTAGGTCAGACGTCATGATC+GGG | + | chr5_1:70797298-70797317 | Msa0747150:intron | 45.0% | |
| AGCCTAATGAAACTATGGGC+TGG | + | chr5_1:70797715-70797734 | Msa0747150:intron | 45.0% | |
| CACCAGCCCATAGTTTCATT+AGG | - | chr5_1:70797720-70797739 | None:intergenic | 45.0% | |
| TCAATTTGGCCCACTTGGAT+TGG | + | chr5_1:70797752-70797771 | Msa0747150:intron | 45.0% | |
| CCTAACTTGACCAATCCAAG+TGG | - | chr5_1:70797765-70797784 | None:intergenic | 45.0% | |
| !! | CCACTTGGATTGGTCAAGTT+AGG | + | chr5_1:70797762-70797781 | Msa0747150:intron | 45.0% |
| ATTGGTCAAGTTAGGTCGGA+CGG | + | chr5_1:70797770-70797789 | Msa0747150:intron | 45.0% | |
| GATCATCACTCTCTAGCTGA+TGG | + | chr5_1:70798047-70798066 | Msa0747150:CDS | 45.0% | |
| GCAGCTAAAAAGGTCTCCAA+TGG | + | chr5_1:70798167-70798186 | Msa0747150:CDS | 45.0% | |
| CCATTGCTTCCTATTTCACG+TGG | - | chr5_1:70798233-70798252 | None:intergenic | 45.0% | |
| CCACGTGAAATAGGAAGCAA+TGG | + | chr5_1:70798230-70798249 | Msa0747150:CDS | 45.0% | |
| GTAGCAACTTTGCATCATGC+TGG | + | chr5_1:70798281-70798300 | Msa0747150:CDS | 45.0% | |
| CGCATGACAACAACAAAGGA+TGG | - | chr5_1:70798454-70798473 | None:intergenic | 45.0% | |
| TGCACGCATGACAACAACAA+AGG | - | chr5_1:70798458-70798477 | None:intergenic | 45.0% | |
| !! | CGTGGAACACCGATTTCTTA+TGG | + | chr5_1:70798483-70798502 | Msa0747150:CDS | 45.0% |
| ! | AACTACGTATGCACTGACGA+AGG | + | chr5_1:70798517-70798536 | Msa0747150:intron | 45.0% |
| GAATTTCCCAGCTCAAATGG+AGG | + | chr5_1:70798662-70798681 | Msa0747150:intron | 45.0% | |
| ! | CTTTAAGGGCCATCCTGATT+AGG | - | chr5_1:70798974-70798993 | None:intergenic | 45.0% |
| CTAATCAGGATGGCCCTTAA+AGG | + | chr5_1:70798972-70798991 | Msa0747150:CDS | 45.0% | |
| !! | GAGAAGCGTCTTCTTTCACT+TGG | - | chr5_1:70799255-70799274 | None:intergenic | 45.0% |
| GTGAAAGAAGACGCTTCTCA+AGG | + | chr5_1:70799256-70799275 | Msa0747150:CDS | 45.0% | |
| TAGGTCAGACGTCATGATCG+GGG | + | chr5_1:70797299-70797318 | Msa0747150:intron | 50.0% | |
| TGTCATGCGTGCATCATACG+TGG | + | chr5_1:70798465-70798484 | Msa0747150:CDS | 50.0% | |
| TAGGACCCTCCATTTGAGCT+GGG | - | chr5_1:70798671-70798690 | None:intergenic | 50.0% | |
| TTAGGACCCTCCATTTGAGC+TGG | - | chr5_1:70798672-70798691 | None:intergenic | 50.0% | |
| ! | GGCCTGCAAAGTACCTAATC+AGG | + | chr5_1:70798958-70798977 | Msa0747150:CDS | 50.0% |
| TGATCTCACAACTGGGTGGA+AGG | + | chr5_1:70799004-70799023 | Msa0747150:CDS | 50.0% | |
| !! | TGGGTGGAAGGCATTTGCAA+AGG | + | chr5_1:70799016-70799035 | Msa0747150:CDS | 50.0% |
| TAGGTCAGACGTCATGATCG+GGG | + | chr5_1:70797299-70797318 | Msa0747150:intron | 50.0% | |
| TGTCATGCGTGCATCATACG+TGG | + | chr5_1:70798465-70798484 | Msa0747150:CDS | 50.0% | |
| TAGGACCCTCCATTTGAGCT+GGG | - | chr5_1:70798671-70798690 | None:intergenic | 50.0% | |
| TTAGGACCCTCCATTTGAGC+TGG | - | chr5_1:70798672-70798691 | None:intergenic | 50.0% | |
| ! | GGCCTGCAAAGTACCTAATC+AGG | + | chr5_1:70798958-70798977 | Msa0747150:CDS | 50.0% |
| TGATCTCACAACTGGGTGGA+AGG | + | chr5_1:70799004-70799023 | Msa0747150:CDS | 50.0% | |
| !! | TGGGTGGAAGGCATTTGCAA+AGG | + | chr5_1:70799016-70799035 | Msa0747150:CDS | 50.0% |
| CATGCTGGCAGAGAGTCCAA+AGG | + | chr5_1:70798296-70798315 | Msa0747150:CDS | 55.0% | |
| CATGCTGGCAGAGAGTCCAA+AGG | + | chr5_1:70798296-70798315 | Msa0747150:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 70796956 | 70799282 | 70796956 | ID=Msa0747150;Name=Msa0747150 |
| chr5_1 | mRNA | 70796956 | 70799282 | 70796956 | ID=Msa0747150-mRNA-1;Parent=Msa0747150;Name=Msa0747150-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.8|0.75|0.6|5|0|320 |
| chr5_1 | exon | 70796956 | 70797051 | 70796956 | ID=Msa0747150-mRNA-1:exon:20885;Parent=Msa0747150-mRNA-1 |
| chr5_1 | exon | 70797900 | 70798317 | 70797900 | ID=Msa0747150-mRNA-1:exon:20886;Parent=Msa0747150-mRNA-1 |
| chr5_1 | exon | 70798383 | 70798504 | 70798383 | ID=Msa0747150-mRNA-1:exon:20887;Parent=Msa0747150-mRNA-1 |
| chr5_1 | exon | 70798873 | 70799161 | 70798873 | ID=Msa0747150-mRNA-1:exon:20888;Parent=Msa0747150-mRNA-1 |
| chr5_1 | exon | 70799245 | 70799282 | 70799245 | ID=Msa0747150-mRNA-1:exon:20889;Parent=Msa0747150-mRNA-1 |
| chr5_1 | CDS | 70796956 | 70797051 | 70796956 | ID=Msa0747150-mRNA-1:cds;Parent=Msa0747150-mRNA-1 |
| chr5_1 | CDS | 70797900 | 70798317 | 70797900 | ID=Msa0747150-mRNA-1:cds;Parent=Msa0747150-mRNA-1 |
| chr5_1 | CDS | 70798383 | 70798504 | 70798383 | ID=Msa0747150-mRNA-1:cds;Parent=Msa0747150-mRNA-1 |
| chr5_1 | CDS | 70798873 | 70799161 | 70798873 | ID=Msa0747150-mRNA-1:cds;Parent=Msa0747150-mRNA-1 |
| chr5_1 | CDS | 70799245 | 70799282 | 70799245 | ID=Msa0747150-mRNA-1:cds;Parent=Msa0747150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
