AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0751300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751300 MtrunA17_Chr5g0394621 76.923 169 37 1 1 167 1 169 9.80e-88 262
Msa0751300 MtrunA17_Chr5g0394621 67.347 147 43 3 163 307 35 178 2.77e-57 184
Msa0751300 MtrunA17_Chr5g0394631 71.765 170 46 1 1 168 1 170 9.30e-79 246
Msa0751300 MtrunA17_Chr5g0394631 75.776 161 31 5 13 167 222 380 5.07e-73 232
Msa0751300 MtrunA17_Chr5g0394631 84.615 130 17 2 168 294 249 378 2.07e-69 223
Msa0751300 MtrunA17_Chr5g0394631 61.224 147 52 3 163 307 35 178 1.79e-47 165
Msa0751300 MtrunA17_Chr1g0204971 63.314 169 60 1 1 167 1 169 2.37e-72 223
Msa0751300 MtrunA17_Chr1g0204971 58.015 131 50 3 166 294 40 167 3.79e-41 142
Msa0751300 MtrunA17_Chr1g0204951 63.905 169 59 1 1 167 1 169 2.09e-71 220
Msa0751300 MtrunA17_Chr1g0204951 61.069 131 46 3 166 294 40 167 3.54e-44 150
Msa0751300 MtrunA17_Chr7g0273661 44.000 150 83 1 17 166 4 152 2.99e-37 131
Msa0751300 MtrunA17_Chr7g0273661 41.228 114 64 1 181 294 41 151 7.83e-21 88.2
Msa0751300 MtrunA17_Chr7g0223361 42.667 150 84 2 16 165 3 150 9.10e-34 123
Msa0751300 MtrunA17_Chr7g0223361 44.068 118 62 3 178 295 38 151 2.88e-23 95.1
Msa0751300 MtrunA17_Chr7g0223351 38.323 167 99 3 20 185 7 170 3.57e-30 113
Msa0751300 MtrunA17_Chr7g0223351 42.478 113 60 3 182 294 42 149 3.55e-22 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751300 AT2G32020.1 55.034 149 62 3 20 167 18 162 1.72e-47 159
Msa0751300 AT2G32020.1 49.624 133 57 4 166 295 36 161 1.67e-29 112
Msa0751300 AT2G32030.1 53.378 148 64 3 21 167 24 167 2.04e-45 154
Msa0751300 AT2G32030.1 46.296 162 70 7 166 324 41 188 7.08e-29 110
Msa0751300 AT3G22560.1 38.562 153 91 2 16 166 2 153 3.00e-28 108
Msa0751300 AT3G22560.1 34.815 135 78 5 165 294 23 152 1.53e-16 77.0

Find 76 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGTTCTTAGGAAGTATT+TGG 0.241791 5_2:+4818609 Msa0751300:CDS
ATAATCTAAGCTCTATATAT+TGG 0.258828 5_2:+4818440 Msa0751300:CDS
TCCTAAGAACTCCCTCCTTT+TGG 0.260104 5_2:-4818600 None:intergenic
AGATTCAAATGTGCAGAAAT+TGG 0.260145 5_2:+4820736 Msa0751300:CDS
TGTTCTTGGCTCTAAATATT+GGG 0.264898 5_2:+4820762 Msa0751300:CDS
ATGAAAAGGTAGCCAAGTTC+TGG 0.273400 5_2:+4820569 Msa0751300:CDS
GCTTCAAGCCTTTCCAAGTA+TGG 0.276638 5_2:-4820844 None:intergenic
ATGTTCTTGGCTCTAAATAT+TGG 0.284971 5_2:+4820761 Msa0751300:CDS
ATCAAGGTCAGAAAGATTAA+AGG 0.290557 5_2:-4818206 None:intergenic
TAATCTAAGCTCTATATATT+GGG 0.291812 5_2:+4818441 Msa0751300:CDS
TGCTGTGAAACAAATTATTA+AGG 0.312252 5_2:+4818483 Msa0751300:CDS
TTGTTGATGTGGATAATTTA+TGG 0.328127 5_2:+4820869 Msa0751300:CDS
TGCCATAATGATCATGCTAT+TGG 0.333891 5_2:+4820673 Msa0751300:CDS
ACCCAATAGCATGATCATTA+TGG 0.341789 5_2:-4820675 None:intergenic
TCTCCAAGTATGAAAATTCA+TGG 0.373432 5_2:-4818513 None:intergenic
GCAGAAATTGGGTATGTTCT+TGG 0.375559 5_2:+4820748 Msa0751300:CDS
CCTTCGTCTTTGCTAGTGTA+AGG 0.376096 5_2:-4820598 None:intergenic
TTCAAAACGAGGGAGTTCTT+AGG 0.383905 5_2:+4820920 Msa0751300:CDS
GCTCTAAATATTGGGGTAAA+GGG 0.393083 5_2:+4820770 Msa0751300:CDS
TCCAAAAGGAGGGAGTTCTT+AGG 0.394554 5_2:+4818599 Msa0751300:CDS
TAAAGGGTCGGAGTGTGATT+TGG 0.396804 5_2:-4818189 None:intergenic
TGTGAAGCTTGCTGCTGAAC+AGG 0.399282 5_2:-4829494 Msa0751310:three_prime_UTR
ATTTGTGCGCGTAGGTGATA+TGG 0.401373 5_2:-4829584 Msa0751310:CDS
TGCATTGATGATCGTGCTAT+TGG 0.407515 5_2:+4818358 Msa0751300:CDS
GGCTCTAAATATTGGGGTAA+AGG 0.409136 5_2:+4820769 Msa0751300:CDS
ATTCAGTGAATTTCCATACT+TGG 0.413337 5_2:+4820831 Msa0751300:CDS
CACGTTTGCTGTGAAACAAA+TGG 0.422199 5_2:+4820798 Msa0751300:CDS
AGGAAACAATCTGCAGAACT+TGG 0.436712 5_2:+4818415 Msa0751300:CDS
TTCTGACCTTGATGATGTAA+TGG 0.440976 5_2:+4818216 Msa0751300:CDS
CCATCGTCTCTGCTGGTGTA+TGG 0.442715 5_2:-4818283 None:intergenic
CAAAGAGTAGTTGAGAAAGT+TGG 0.450786 5_2:+4820895 Msa0751300:CDS
GGTTGCCAAGTTCTGCTCTT+GGG 0.451345 5_2:+4818258 Msa0751300:CDS
CCCTCTGCAGTGTATTCATC+GGG 0.463366 5_2:-4829437 Msa0751310:three_prime_UTR
GATTCAAATGTGCAGAAATT+GGG 0.463802 5_2:+4820737 Msa0751300:CDS
GTTGATGCCATCGTCTCTGC+TGG 0.472064 5_2:-4818290 None:intergenic
TGCTGTGAAACAAATGGTTA+AGG 0.473285 5_2:+4820804 Msa0751300:CDS
TCCCTCTGCAGTGTATTCAT+CGG 0.475396 5_2:-4829438 Msa0751310:three_prime_UTR
TCAAGGTCAGAAAGATTAAA+GGG 0.477441 5_2:-4818205 None:intergenic
GCCATAATGATCATGCTATT+GGG 0.478546 5_2:+4820674 Msa0751300:CDS
TGAAAAGGTAGCCAAGTTCT+GGG 0.482152 5_2:+4820570 Msa0751300:CDS
CTTGTCGATGTTGAAAATGT+TGG 0.484592 5_2:+4818547 Msa0751300:CDS
GTGAATTTCCATACTTGGAA+AGG 0.490341 5_2:+4820836 Msa0751300:CDS
GCTCTATATATTGGGGCAAA+GGG 0.493310 5_2:+4818449 Msa0751300:CDS
AGGTTGCCAAGTTCTGCTCT+TGG 0.493839 5_2:+4818257 Msa0751300:CDS
GCTTGCTGCTGAACAGGAAA+CGG 0.499122 5_2:-4829488 Msa0751310:three_prime_UTR
CAAAGAGTGTTGGAGAAAGC+TGG 0.499760 5_2:+4818574 Msa0751300:CDS
AGCTCTATATATTGGGGCAA+AGG 0.501996 5_2:+4818448 Msa0751300:CDS
TTGTCGATGTTGAAAATGTT+GGG 0.503194 5_2:+4818548 Msa0751300:CDS
GGAGAAAGCTGGTTTCCAAA+AGG 0.547990 5_2:+4818585 Msa0751300:CDS
GAAAGCTGGTTTCCAAAAGG+AGG 0.562242 5_2:+4818588 Msa0751300:CDS
GATATGGTGTACTGTATACT+TGG 0.564892 5_2:-4829568 Msa0751310:CDS
TGTTGGGTCACAAAGAGTGT+TGG 0.566749 5_2:+4818564 Msa0751300:CDS
TGGTTCCCAAGAGCAGAACT+TGG 0.574822 5_2:-4818263 None:intergenic
GCTTGAAGCTCTTGTTGATG+TGG 0.580383 5_2:+4820858 Msa0751300:CDS
CCCGATGAATACACTGCAGA+GGG 0.584370 5_2:+4829437 Msa0751300:CDS
ACGGCGTGGAATTTGGCTCT+CGG 0.591742 5_2:-4829523 Msa0751310:three_prime_UTR
GTTCTTGGCTCTAAATATTG+GGG 0.592957 5_2:+4820763 Msa0751300:CDS
AATCTAAGCTCTATATATTG+GGG 0.593409 5_2:+4818442 Msa0751300:CDS
GCCACACCATTACATCATCA+AGG 0.594693 5_2:-4818222 None:intergenic
GGTCAGAAAGATTAAAGGGT+CGG 0.596865 5_2:-4818201 None:intergenic
TCACACCTGAAGATAAAAGC+AGG 0.598275 5_2:+4818395 Msa0751300:CDS
GGTGTGGCATACTGATGTAA+AGG 0.604925 5_2:+4818237 Msa0751300:CDS
GTGGCAGTAGACTGATGAAA+AGG 0.609111 5_2:+4820555 Msa0751300:intron
AAAAGGTAGCCAAGTTCTGG+GGG 0.620200 5_2:+4820572 Msa0751300:CDS
CCATACACCAGCAGAGACGA+TGG 0.622747 5_2:+4818283 Msa0751300:CDS
GAAAAGGTAGCCAAGTTCTG+GGG 0.624494 5_2:+4820571 Msa0751300:CDS
GATATGCCTCACAGCAAGAA+CGG 0.626057 5_2:+4829459 Msa0751300:CDS
AAAGCTGGTTTCCAAAAGGA+GGG 0.657724 5_2:+4818589 Msa0751300:CDS
CATTTGTTTCACAGCAAACG+TGG 0.659491 5_2:-4820797 None:intergenic
ATGGTGTACTGTATACTTGG+AGG 0.663058 5_2:-4829565 Msa0751310:CDS
GCCCGATGAATACACTGCAG+AGG 0.664055 5_2:+4829436 Msa0751300:CDS
ACATCACCGTTCTTGCTGTG+AGG 0.674400 5_2:-4829465 Msa0751310:three_prime_UTR
ACCTTGATGATGTAATGGTG+TGG 0.686805 5_2:+4818221 Msa0751300:CDS
GAGCTGTCATTTGTGCGCGT+AGG 0.698927 5_2:-4829592 Msa0751310:CDS
CCTTACACTAGCAAAGACGA+AGG 0.715657 5_2:+4820598 Msa0751300:CDS
AAAGGTAGCCAAGTTCTGGG+GGG 0.779565 5_2:+4820573 Msa0751300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAAATAAAATATT+TGG - chr5_2:4821480-4821499 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr5_2:4822934-4822953 Msa0751300:intron 0.0%
!! TATATATATATATATATATA+GGG + chr5_2:4822933-4822952 Msa0751300:intron 0.0%
!! TATATATATATATATATATA+GGG - chr5_2:4822933-4822952 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr5_2:4822934-4822953 None:intergenic 0.0%
!! TTATGTTATTATAATCTATA+AGG + chr5_2:4818859-4818878 Msa0751300:intron 10.0%
!!! TATATAATTTTTTCAAGTAT+TGG - chr5_2:4818914-4818933 None:intergenic 10.0%
!! AAGAAAAAAAATATTTCTTA+TGG - chr5_2:4819684-4819703 None:intergenic 10.0%
!!! TAAGAAATATTTTTTTTCTT+AGG + chr5_2:4819684-4819703 Msa0751300:intron 10.0%
!!! TTTCACAAATATTATTATTT+TGG + chr5_2:4819996-4820015 Msa0751300:intron 10.0%
!!! CATTTAATTTTTTTTTTAAC+CGG + chr5_2:4821853-4821872 Msa0751300:intron 10.0%
!!! TTTTATTATCTTTTTTTCAA+AGG + chr5_2:4821885-4821904 Msa0751300:intron 10.0%
!! TGAAAAATAGTTAAAAAAAT+CGG - chr5_2:4822158-4822177 None:intergenic 10.0%
!!! GTTTCATTTAATTTTTTTTA+AGG + chr5_2:4822544-4822563 Msa0751300:intron 10.0%
!! AAAAAGGTAATAAAATTAAA+TGG - chr5_2:4822575-4822594 None:intergenic 10.0%
!! AGAAAGAAAATAAAAATATT+TGG - chr5_2:4822704-4822723 None:intergenic 10.0%
!!! TCAAAACAAATTTAAAATAA+AGG - chr5_2:4824024-4824043 None:intergenic 10.0%
!! ACATATAATTTATAAAATGA+AGG - chr5_2:4826295-4826314 None:intergenic 10.0%
!! AAAATGAAACTTATTAAAGT+TGG - chr5_2:4818690-4818709 None:intergenic 15.0%
!! ACAAAAAAAATGTAATACAT+CGG - chr5_2:4818761-4818780 None:intergenic 15.0%
!! AAAGTTAAAACATAATCTTA+GGG + chr5_2:4818827-4818846 Msa0751300:intron 15.0%
!!! TTTTAATTGTAATCAAAATC+AGG - chr5_2:4818945-4818964 None:intergenic 15.0%
!!! TTTTTAACATCATATAGTAT+CGG + chr5_2:4819329-4819348 Msa0751300:intron 15.0%
!!! AAATATTTTTTTTCTTAGGT+GGG + chr5_2:4819688-4819707 Msa0751300:intron 15.0%
!!! TTTTATTTCATTCTAAATCT+TGG - chr5_2:4819879-4819898 None:intergenic 15.0%
!! AGAATGAAATAAAATAACTT+AGG + chr5_2:4819885-4819904 Msa0751300:intron 15.0%
!! TTATGGTAATATATTAACAA+TGG + chr5_2:4820032-4820051 Msa0751300:intron 15.0%
!!! GTTTCTTTTATGAATTAATT+TGG - chr5_2:4820420-4820439 None:intergenic 15.0%
!! AATAAAATATTTGGATAATG+AGG - chr5_2:4821471-4821490 None:intergenic 15.0%
!! CGGTTAAAAAAAAAATTAAA+TGG - chr5_2:4821855-4821874 None:intergenic 15.0%
!! AGAAAGGAAATAAAAATATT+TGG - chr5_2:4822009-4822028 None:intergenic 15.0%
!!! ATAATTTTTTTAATGTTGCT+TGG + chr5_2:4822117-4822136 Msa0751300:intron 15.0%
!! TACTTAATTGATATTGTATT+TGG - chr5_2:4822316-4822335 None:intergenic 15.0%
!!! TTTTATTACCTTTTTTTCAA+AGG + chr5_2:4822580-4822599 Msa0751300:intron 15.0%
!!! ATAAAATTCCTTTGAAAAAA+AGG - chr5_2:4821896-4821915 None:intergenic 15.0%
!! ATTATTTATGTTATTATTCC+AGG + chr5_2:4823599-4823618 Msa0751300:intron 15.0%
!!! ATGTTTAAAATATTTTCTGA+AGG - chr5_2:4823771-4823790 None:intergenic 15.0%
!!! TTTTTAAGTTAAATGTTGTT+TGG - chr5_2:4823952-4823971 None:intergenic 15.0%
!!! TTTTTTTTTTCAATTGTTAG+TGG + chr5_2:4824293-4824312 Msa0751300:intron 15.0%
!!! GTATTATTGTATTTCTATAT+AGG + chr5_2:4824734-4824753 Msa0751300:intron 15.0%
!! ATCTATAAGAACATTATAAT+CGG - chr5_2:4825290-4825309 None:intergenic 15.0%
!!! AATTTTTCTTAAGAAATCAT+CGG + chr5_2:4825312-4825331 Msa0751300:intron 15.0%
!! AAGTTTATAAATTCAACAAT+TGG - chr5_2:4825875-4825894 None:intergenic 15.0%
!!! ACATGATTTGAATTTTTTTA+CGG + chr5_2:4825923-4825942 Msa0751300:intron 15.0%
!! TTATGGATTTCTTTATATTT+AGG - chr5_2:4827267-4827286 None:intergenic 15.0%
!!! ATTTTGTATTATTGGTATTA+GGG - chr5_2:4827573-4827592 None:intergenic 15.0%
!!! TATTTTGTATTATTGGTATT+AGG - chr5_2:4827574-4827593 None:intergenic 15.0%
!!! ACTAATTTTTTGTTATCAAT+GGG - chr5_2:4828237-4828256 None:intergenic 15.0%
!! AGGTTAATTAAATTAAAATG+TGG - chr5_2:4828812-4828831 None:intergenic 15.0%
!! ATAATCTAAGCTCTATATAT+TGG + chr5_2:4818440-4818459 Msa0751300:CDS 20.0%
!! TAATCTAAGCTCTATATATT+GGG + chr5_2:4818441-4818460 Msa0751300:CDS 20.0%
!!! CATTTTTTTTGTGATATTTG+AGG + chr5_2:4818769-4818788 Msa0751300:intron 20.0%
!! CAAAGTTAAAACATAATCTT+AGG + chr5_2:4818826-4818845 Msa0751300:intron 20.0%
!!! ATCAAAGGTATATAAAATTG+TGG + chr5_2:4819039-4819058 Msa0751300:intron 20.0%
!!! TAGTATCGGTATTAAAAAAA+AGG + chr5_2:4819343-4819362 Msa0751300:intron 20.0%
!!! GAAATATTTTTTTTCTTAGG+TGG + chr5_2:4819687-4819706 Msa0751300:intron 20.0%
!!! TAAAAATGGTTTTCAATTGT+TGG + chr5_2:4819840-4819859 Msa0751300:intron 20.0%
!! TAAAATAACTTAGGTAACAT+AGG + chr5_2:4819894-4819913 Msa0751300:intron 20.0%
!! AAAATAACTTAGGTAACATA+GGG + chr5_2:4819895-4819914 Msa0751300:intron 20.0%
!! TTCATAAAAGAAACAAGTTA+TGG + chr5_2:4820426-4820445 Msa0751300:intron 20.0%
!!! TTATTAATTTATTGGTTGTC+CGG + chr5_2:4821114-4821133 Msa0751300:intron 20.0%
!! TTTGAATGCATAAAATTGAA+TGG + chr5_2:4821686-4821705 Msa0751300:intron 20.0%
!! GATAATAAAATTAAATGGAC+CGG - chr5_2:4821875-4821894 None:intergenic 20.0%
!! AGAGAAGTTGAAAAAAAAAA+CGG - chr5_2:4822271-4822290 None:intergenic 20.0%
!!! TTTTAATGCATAAAACTGAA+TGG + chr5_2:4822357-4822376 Msa0751300:intron 20.0%
!! CGGTTCAAAAAAAAATTAAA+AGG - chr5_2:4822525-4822544 None:intergenic 20.0%
!!! ATAAGTTAATTTGTTGAAAG+TGG + chr5_2:4823076-4823095 Msa0751300:intron 20.0%
!!! TAAGTTAATTTGTTGAAAGT+GGG + chr5_2:4823077-4823096 Msa0751300:intron 20.0%
!!! CATAGTTTGTTACAATATAA+AGG - chr5_2:4823398-4823417 None:intergenic 20.0%
!!! TTATAAGAATACCATAGTTT+TGG - chr5_2:4823528-4823547 None:intergenic 20.0%
!!! GACTTGTTAAATATTTGAAT+AGG - chr5_2:4823642-4823661 None:intergenic 20.0%
!!! TATTATTTTTTTATGGTGTC+CGG - chr5_2:4823904-4823923 None:intergenic 20.0%
!!! AATTTTAGCTTCTTTCTTAA+AGG + chr5_2:4823998-4824017 Msa0751300:intron 20.0%
!! GTAACATTGATAAATCATAA+AGG - chr5_2:4824916-4824935 None:intergenic 20.0%
!!! ATATTTTTTGGTTTCTTTCT+CGG + chr5_2:4824962-4824981 Msa0751300:intron 20.0%
!!! ATTTTTCTTAAGAAATCATC+GGG + chr5_2:4825313-4825332 Msa0751300:intron 20.0%
!! ACCAATTGTTACATATATTT+GGG - chr5_2:4825579-4825598 None:intergenic 20.0%
!! TGAATTTATAAACTTAGTCA+AGG + chr5_2:4825880-4825899 Msa0751300:intron 20.0%
!! ATTAACATTGTTGAAACAAA+CGG - chr5_2:4826153-4826172 None:intergenic 20.0%
!! TTTGTTTCAACAATGTTAAT+TGG + chr5_2:4826153-4826172 Msa0751300:intron 20.0%
!! TGACTTTATAAGAAGATAAT+AGG + chr5_2:4826215-4826234 Msa0751300:intron 20.0%
!!! TATTTGAACTTCTACTATTT+TGG + chr5_2:4826651-4826670 Msa0751300:intron 20.0%
!!! ATTTTGTCTGATGTAAATAT+TGG + chr5_2:4826735-4826754 Msa0751300:intron 20.0%
!! ATTAACGTTACATAATAGTT+AGG - chr5_2:4826811-4826830 None:intergenic 20.0%
!! ATCATTAACATGATACTAAT+TGG - chr5_2:4826862-4826881 None:intergenic 20.0%
!!! TTGATTTTCACATTTATGAA+CGG + chr5_2:4826935-4826954 Msa0751300:intron 20.0%
!! ATGAGAAATGAGAAAATTAA+GGG - chr5_2:4826991-4827010 None:intergenic 20.0%
!! AATGAGAAATGAGAAAATTA+AGG - chr5_2:4826992-4827011 None:intergenic 20.0%
!! TAATAAATATTGCACAAACT+CGG - chr5_2:4827064-4827083 None:intergenic 20.0%
!! TCATGTAAAAAAAAATCCAA+AGG - chr5_2:4827101-4827120 None:intergenic 20.0%
!! TAACTAGTTGAAATAAAAAC+AGG + chr5_2:4827154-4827173 Msa0751300:intron 20.0%
!! AACTAGTTGAAATAAAAACA+GGG + chr5_2:4827155-4827174 Msa0751300:intron 20.0%
!! TCATAATTGGATAAATACTT+TGG - chr5_2:4827191-4827210 None:intergenic 20.0%
!!! TAAGAAAATGTTTCCATTTT+TGG + chr5_2:4827508-4827527 Msa0751300:intron 20.0%
!!! AAGAAAATGTTTCCATTTTT+GGG + chr5_2:4827509-4827528 Msa0751300:intron 20.0%
!!! ACATGTCTATTTTGTATTAT+TGG - chr5_2:4827581-4827600 None:intergenic 20.0%
!!! ATTTAATCTCAATTTTGTTG+TGG - chr5_2:4827766-4827785 None:intergenic 20.0%
!! ATTGAGATTAAATTTCTCAT+TGG + chr5_2:4827773-4827792 Msa0751300:intron 20.0%
!!! CACTAATTTTTTGTTATCAA+TGG - chr5_2:4828238-4828257 None:intergenic 20.0%
!!! CATTGATAACAAAAAATTAG+TGG + chr5_2:4828236-4828255 Msa0751300:intron 20.0%
!! AAGTAATTTATGAGAATGTT+AGG + chr5_2:4828658-4828677 Msa0751300:intron 20.0%
!! ATATTTCATGAAATAAACCA+TGG - chr5_2:4828959-4828978 None:intergenic 20.0%
!! AAACAAAACATAGAATTGAT+TGG + chr5_2:4829143-4829162 Msa0751300:intron 20.0%
!! AATATGTAATCTTAAACCTT+TGG - chr5_2:4829207-4829226 Msa0751310:three_prime_UTR 20.0%
! AATCTAAGCTCTATATATTG+GGG + chr5_2:4818442-4818461 Msa0751300:CDS 25.0%
! TGCTGTGAAACAAATTATTA+AGG + chr5_2:4818483-4818502 Msa0751300:CDS 25.0%
!! ATTCCATGAATTTTCATACT+TGG + chr5_2:4818510-4818529 Msa0751300:CDS 25.0%
! AAATATCTCGTGAAATCTAT+TGG + chr5_2:4819275-4819294 Msa0751300:intron 25.0%
!! ATTCATTACTTGTTGCTTAT+CGG + chr5_2:4819411-4819430 Msa0751300:intron 25.0%
!! ATTCATTACTTGTTGCTTAT+CGG + chr5_2:4819411-4819430 Msa0751300:intron 25.0%
! AAACAACTCTAATTAAGAGA+CGG - chr5_2:4819742-4819761 None:intergenic 25.0%
! AAATAACTTAGGTAACATAG+GGG + chr5_2:4819896-4819915 Msa0751300:intron 25.0%
! AACTTGTCCAAAAATAACTT+AGG + chr5_2:4819923-4819942 Msa0751300:intron 25.0%
!!! TCTAACACCTAAGTTATTTT+TGG - chr5_2:4819933-4819952 None:intergenic 25.0%
! GACTTGAATATGCATTAAAT+GGG - chr5_2:4820184-4820203 None:intergenic 25.0%
! TGACTTGAATATGCATTAAA+TGG - chr5_2:4820185-4820204 None:intergenic 25.0%
!!! GAATTGAAGTGTTGAATTTT+AGG - chr5_2:4820346-4820365 None:intergenic 25.0%
!!! ACAACAAGTGTTTATTTTCT+AGG - chr5_2:4820391-4820410 None:intergenic 25.0%
! TTGTTGATGTGGATAATTTA+TGG + chr5_2:4820869-4820888 Msa0751300:CDS 25.0%
!! AGGAAGTATGTATTCTTTAA+AGG + chr5_2:4820940-4820959 Msa0751300:intron 25.0%
! CAAAATTGAGAAAAGATTAG+AGG + chr5_2:4821037-4821056 Msa0751300:intron 25.0%
! AGATTGTACGATGATATATT+TGG - chr5_2:4821162-4821181 None:intergenic 25.0%
! AATCTCCTATCAAGTAATTA+AGG + chr5_2:4821177-4821196 Msa0751300:intron 25.0%
! AAAATATTTGGATAATGAGG+TGG - chr5_2:4821468-4821487 None:intergenic 25.0%
!! TCAACTTCTCTACATTTTTA+AGG + chr5_2:4821609-4821628 Msa0751300:intron 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG + chr5_2:4821619-4821638 Msa0751300:intron 25.0%
! CGTGAATAAAAATATTTGTG+AGG - chr5_2:4821970-4821989 None:intergenic 25.0%
! AATAGTTAAAAAAATCGGTG+AGG - chr5_2:4822153-4822172 None:intergenic 25.0%
! CTGAATTTGAGAGAAAAAAT+TGG - chr5_2:4822204-4822223 None:intergenic 25.0%
! GAGAAGTTGAAAAAAAAAAC+GGG - chr5_2:4822270-4822289 None:intergenic 25.0%
!!! TCAACTTCTCTACTTTTTTA+AGG + chr5_2:4822280-4822299 Msa0751300:intron 25.0%
!!! TACTTTTTTAAGGAGAAGTT+AGG + chr5_2:4822290-4822309 Msa0751300:intron 25.0%
! CGTGAATAAAAATATTTGTG+AGG - chr5_2:4821970-4821989 None:intergenic 25.0%
!! AGATGTCTTTTCTTCAAAAA+AGG + chr5_2:4822883-4822902 Msa0751300:intron 25.0%
! AACTTATCATTGTCCTTATT+TGG - chr5_2:4823063-4823082 None:intergenic 25.0%
! TCATGAGATTTAATTGAGTA+TGG + chr5_2:4823149-4823168 Msa0751300:intron 25.0%
!! ATTAAAAGCCCCATTTTAAA+TGG - chr5_2:4823188-4823207 None:intergenic 25.0%
!!! ATACGTCTATTTTGATCTAA+AGG + chr5_2:4823211-4823230 Msa0751300:intron 25.0%
! TGAATAGGAGAAACAATTTA+AGG - chr5_2:4823627-4823646 None:intergenic 25.0%
!!! ATTATTTTTTTATGGTGTCC+GGG - chr5_2:4823903-4823922 None:intergenic 25.0%
! AGAAAGAAGCTAAAATTGTT+TGG - chr5_2:4823995-4824014 None:intergenic 25.0%
!!! CTTGAGTTGATTGATTTTTA+TGG + chr5_2:4824172-4824191 Msa0751300:intron 25.0%
!!! TTTAGTTTTTGCTTCATCAT+AGG + chr5_2:4824222-4824241 Msa0751300:intron 25.0%
! CTAGAAATTGTTATGTTGTT+TGG + chr5_2:4824324-4824343 Msa0751300:intron 25.0%
!! AAAAATCTTCCTTTGTTATG+TGG + chr5_2:4824353-4824372 Msa0751300:intron 25.0%
!!! ACAATTGTTATTTTAGCTTC+TGG + chr5_2:4824428-4824447 Msa0751300:intron 25.0%
! TTGAAAAAAATTGATGCATG+TGG + chr5_2:4824459-4824478 Msa0751300:intron 25.0%
! TGAAAAAAATTGATGCATGT+GGG + chr5_2:4824460-4824479 Msa0751300:intron 25.0%
!!! TGATTGGTGTAAATTTGTTT+TGG + chr5_2:4824565-4824584 Msa0751300:intron 25.0%
!! TTTCTGTATCATCAACTTTT+TGG - chr5_2:4824606-4824625 None:intergenic 25.0%
!! AAATTTGTGCATTTAAGATC+AGG + chr5_2:4824623-4824642 Msa0751300:intron 25.0%
! ATATAGGACTTTCAATATCA+AGG + chr5_2:4824750-4824769 Msa0751300:intron 25.0%
! AAGGAATTATGACTACATTA+AGG + chr5_2:4824769-4824788 Msa0751300:intron 25.0%
! TAAGGATCTCAAAAATGATT+TGG + chr5_2:4824787-4824806 Msa0751300:intron 25.0%
!! TCAAAAATGATTTGGACATT+TGG + chr5_2:4824795-4824814 Msa0751300:intron 25.0%
! AATAACTCGATATAGAGAAT+TGG + chr5_2:4825008-4825027 Msa0751300:intron 25.0%
!! ATTTCGCTTTAAGTCATTTA+AGG + chr5_2:4825188-4825207 Msa0751300:intron 25.0%
! TCATTTAAGGAAATTCAAGA+TGG + chr5_2:4825201-4825220 Msa0751300:intron 25.0%
! TCATTGTGTTGAAAGATAAA+AGG + chr5_2:4825364-4825383 Msa0751300:intron 25.0%
! ACCCAAATATATGTAACAAT+TGG + chr5_2:4825575-4825594 Msa0751300:intron 25.0%
! GACCAATTGTTACATATATT+TGG - chr5_2:4825580-4825599 None:intergenic 25.0%
! AATATATGTAACAATTGGTC+AGG + chr5_2:4825580-4825599 Msa0751300:intron 25.0%
!! TCATGTGCATAAATTTTGTT+AGG + chr5_2:4825981-4826000 Msa0751300:intron 25.0%
! AAACATATTGCATCACTATT+TGG + chr5_2:4826004-4826023 Msa0751300:intron 25.0%
! TAGTCTAATGCATATTAACA+TGG - chr5_2:4826341-4826360 None:intergenic 25.0%
!!! TTTTTCATAGCTTGCTTTTT+CGG - chr5_2:4826495-4826514 None:intergenic 25.0%
! AACGTTAATATGCATATTGT+TGG + chr5_2:4826822-4826841 Msa0751300:intron 25.0%
!!! TAATTTGCTCATTTTTCCTT+TGG + chr5_2:4827082-4827101 Msa0751300:intron 25.0%
!! ATAAATACTTTGGTTTAAGC+AGG - chr5_2:4827181-4827200 None:intergenic 25.0%
!! CATGACAATGTAATGTTTTA+TGG - chr5_2:4827284-4827303 None:intergenic 25.0%
! ATGGTTATTTACACCTTATA+TGG - chr5_2:4827360-4827379 None:intergenic 25.0%
! TGTAAATAACCATAATACCA+AGG + chr5_2:4827367-4827386 Msa0751300:intron 25.0%
! GTAAATAACCATAATACCAA+GGG + chr5_2:4827368-4827387 Msa0751300:intron 25.0%
!! AAGATCTTATGATAACGTAT+AGG + chr5_2:4827615-4827634 Msa0751300:intron 25.0%
!! TCTCAATGCGATAATATTTT+TGG - chr5_2:4827696-4827715 None:intergenic 25.0%
! AAAATATTATCGCATTGAGA+AGG + chr5_2:4827696-4827715 Msa0751300:intron 25.0%
!!! CACATGAGGTTTATTTTAAA+AGG + chr5_2:4827731-4827750 Msa0751300:intron 25.0%
!! AAAGAGATGATTTTGCAAAA+TGG - chr5_2:4827805-4827824 None:intergenic 25.0%
! CAAAATCATCTCTTTAACTA+TGG + chr5_2:4827810-4827829 Msa0751300:intron 25.0%
!! TTGGGATTTTTATATACATC+CGG + chr5_2:4828502-4828521 Msa0751300:intron 25.0%
! ACACATTTCAGATAAATTCA+TGG - chr5_2:4828687-4828706 None:intergenic 25.0%
!! AAGTTTGAATTTGTCACTTA+AGG - chr5_2:4828832-4828851 None:intergenic 25.0%
! GACAAATTCAAACTTACATT+TGG + chr5_2:4828837-4828856 Msa0751300:intron 25.0%
!!! GCAATTTTTGAGTTATTTTC+TGG - chr5_2:4828882-4828901 None:intergenic 25.0%
! AAAACATAGAATTGATTGGA+TGG + chr5_2:4829147-4829166 Msa0751300:intron 25.0%
! ACATTAAAGTTATAGCTACT+TGG + chr5_2:4829327-4829346 Msa0751300:intron 25.0%
TCAAGGTCAGAAAGATTAAA+GGG - chr5_2:4818208-4818227 None:intergenic 30.0%
ATCAAGGTCAGAAAGATTAA+AGG - chr5_2:4818209-4818228 None:intergenic 30.0%
TCTCCAAGTATGAAAATTCA+TGG - chr5_2:4818516-4818535 None:intergenic 30.0%
! ATGAATTTTCATACTTGGAG+AGG + chr5_2:4818515-4818534 Msa0751300:CDS 30.0%
TTGTCGATGTTGAAAATGTT+GGG + chr5_2:4818548-4818567 Msa0751300:CDS 30.0%
! GTTACTTTCCTTTCTTAACA+AGG - chr5_2:4818799-4818818 None:intergenic 30.0%
TGTTAAGAAAGGAAAGTAAC+AGG + chr5_2:4818799-4818818 Msa0751300:intron 30.0%
TATATACCTTTGATCTTCCT+AGG - chr5_2:4819033-4819052 None:intergenic 30.0%
!! TTGTTTTGTGATTCAAGAGA+TGG - chr5_2:4819227-4819246 None:intergenic 30.0%
GATAAATCTAAGTTGTGCTT+TGG - chr5_2:4819389-4819408 None:intergenic 30.0%
! TATTTCTAACTCTACAGACA+AGG + chr5_2:4819586-4819605 Msa0751300:intron 30.0%
! ATCGTGTTATTCATAGATGA+TGG + chr5_2:4819783-4819802 Msa0751300:intron 30.0%
! TCGTGTTATTCATAGATGAT+GGG + chr5_2:4819784-4819803 Msa0751300:intron 30.0%
!! GGTTTTCAATTGTTGGTTAT+TGG + chr5_2:4819847-4819866 Msa0751300:intron 30.0%
! TTCAATTGTTGGTTATTGGA+TGG + chr5_2:4819851-4819870 Msa0751300:intron 30.0%
TTGGTTAATTGCGATGATTA+TGG + chr5_2:4820015-4820034 Msa0751300:intron 30.0%
CTAGGCTATTTATAAAGTCA+TGG - chr5_2:4820373-4820392 None:intergenic 30.0%
CAAATCAATGATCTCTTCAT+TGG - chr5_2:4820482-4820501 None:intergenic 30.0%
AGATTCAAATGTGCAGAAAT+TGG + chr5_2:4820736-4820755 Msa0751300:CDS 30.0%
GATTCAAATGTGCAGAAATT+GGG + chr5_2:4820737-4820756 Msa0751300:CDS 30.0%
!! ATGTTCTTGGCTCTAAATAT+TGG + chr5_2:4820761-4820780 Msa0751300:CDS 30.0%
!! TGTTCTTGGCTCTAAATATT+GGG + chr5_2:4820762-4820781 Msa0751300:CDS 30.0%
ATTCAGTGAATTTCCATACT+TGG + chr5_2:4820831-4820850 Msa0751300:CDS 30.0%
!!! AAAGTTGGTTTTCAAAACGA+GGG + chr5_2:4820910-4820929 Msa0751300:CDS 30.0%
ATGGTTCAATTAGATTGAAC+CGG - chr5_2:4821136-4821155 None:intergenic 30.0%
ACGATGATATATTTGGATCA+TGG - chr5_2:4821155-4821174 None:intergenic 30.0%
CAATGCCTTAATTACTTGAT+AGG - chr5_2:4821185-4821204 None:intergenic 30.0%
!! GGCATTGATTTAGATTTACT+AGG + chr5_2:4821198-4821217 Msa0751300:intron 30.0%
TGATGTACAATCAACCTATT+GGG - chr5_2:4821332-4821351 None:intergenic 30.0%
TTGATGTACAATCAACCTAT+TGG - chr5_2:4821333-4821352 None:intergenic 30.0%
GTTGATTGTACATCAAACAA+AGG + chr5_2:4821337-4821356 Msa0751300:intron 30.0%
ATGTAGAAGCAACTGAATTT+AGG - chr5_2:4821546-4821565 None:intergenic 30.0%
TAGAGAAGTTGAAAAAAAGC+CGG - chr5_2:4821601-4821620 None:intergenic 30.0%
AAATTGAATGGAATGAGCTT+TGG + chr5_2:4821698-4821717 Msa0751300:intron 30.0%
! AAGTACCATTCAACAACTTT+TGG - chr5_2:4821724-4821743 None:intergenic 30.0%
TGTATGTGTATATATTCGTG+AGG - chr5_2:4822036-4822055 None:intergenic 30.0%
GTAACAAAAAAACAGACAGA+CGG - chr5_2:4822087-4822106 None:intergenic 30.0%
! AAGTAGCATTCAACAACTTT+TGG - chr5_2:4822395-4822414 None:intergenic 30.0%
! ATCTCTTTTCAATTCACGTT+GGG + chr5_2:4822450-4822469 Msa0751300:intron 30.0%
AGATTTAATTGAGTATGGTG+AGG + chr5_2:4823154-4823173 Msa0751300:intron 30.0%
!! GTACATGTGCCATTTAAAAT+GGG + chr5_2:4823176-4823195 Msa0751300:intron 30.0%
!! TACATGTGCCATTTAAAATG+GGG + chr5_2:4823177-4823196 Msa0751300:intron 30.0%
! CTAGTGAGAATAAGACTTTT+AGG - chr5_2:4823262-4823281 None:intergenic 30.0%
TTGTTACATTGTTAGTGTCA+TGG - chr5_2:4823462-4823481 None:intergenic 30.0%
TTTGAAAGACACCAAAACTA+TGG + chr5_2:4823514-4823533 Msa0751300:intron 30.0%
!!! TTATTTTTTTATGGTGTCCG+GGG - chr5_2:4823902-4823921 None:intergenic 30.0%
TTCACTTTCTTCTTCATAAG+AGG + chr5_2:4824107-4824126 Msa0751300:intron 30.0%
GTCTCAGAACTATGAAAAAA+AGG - chr5_2:4824143-4824162 None:intergenic 30.0%
!! TGATTGATTTTTATGGCTTG+AGG + chr5_2:4824179-4824198 Msa0751300:intron 30.0%
!! GATTGATTTTTATGGCTTGA+GGG + chr5_2:4824180-4824199 Msa0751300:intron 30.0%
!! ATTGATTTTTATGGCTTGAG+GGG + chr5_2:4824181-4824200 Msa0751300:intron 30.0%
! TTTTCACGATTCTGCATTTA+AGG + chr5_2:4824262-4824281 Msa0751300:intron 30.0%
TTTCACGATTCTGCATTTAA+GGG + chr5_2:4824263-4824282 Msa0751300:intron 30.0%
TACTATACTCCACATAACAA+AGG - chr5_2:4824365-4824384 None:intergenic 30.0%
!!! GATGATTGAATTTTAGCTCA+TGG + chr5_2:4824393-4824412 Msa0751300:intron 30.0%
CCAAATAAGAAAACAGCTTT+AGG - chr5_2:4824509-4824528 None:intergenic 30.0%
!! CCTAAAGCTGTTTTCTTATT+TGG + chr5_2:4824506-4824525 Msa0751300:intron 30.0%
!!! TTGTTTTGGTCATATCATTG+AGG + chr5_2:4824579-4824598 Msa0751300:intron 30.0%
GATTTGGACATTTGGAAAAT+TGG + chr5_2:4824803-4824822 Msa0751300:intron 30.0%
GACATTTGGAAAATTGGATT+TGG + chr5_2:4824809-4824828 Msa0751300:intron 30.0%
CATTGCATTTAATCCCTTTA+AGG + chr5_2:4825101-4825120 Msa0751300:intron 30.0%
!!! AATCCCTTTAAGGTTGTTTT+TGG + chr5_2:4825111-4825130 Msa0751300:intron 30.0%
GAACCAAAAACAACCTTAAA+GGG - chr5_2:4825117-4825136 None:intergenic 30.0%
AGAACCAAAAACAACCTTAA+AGG - chr5_2:4825118-4825137 None:intergenic 30.0%
!!! TTTAAGGTTGTTTTTGGTTC+TGG + chr5_2:4825117-4825136 Msa0751300:intron 30.0%
! TTCAAAACTGACGCTTTATT+TGG + chr5_2:4825228-4825247 Msa0751300:intron 30.0%
!! ATTTTTCAGCATCAGATGAT+AGG + chr5_2:4825399-4825418 Msa0751300:intron 30.0%
CATAAGGAAATACATCTTTC+AGG - chr5_2:4825448-4825467 None:intergenic 30.0%
! ATATGGTTGATGTAACACTA+TGG + chr5_2:4825476-4825495 Msa0751300:intron 30.0%
! TATGGTTGATGTAACACTAT+GGG + chr5_2:4825477-4825496 Msa0751300:intron 30.0%
CAAGAAACATTCAAGAAACA+TGG - chr5_2:4825737-4825756 None:intergenic 30.0%
TCAGAACTTAAGTCATAGTT+CGG + chr5_2:4825796-4825815 Msa0751300:intron 30.0%
AAATTCAATCCTAACCAGTT+TGG + chr5_2:4826036-4826055 Msa0751300:intron 30.0%
AGCAAGCTATGAAAAATACT+TGG + chr5_2:4826499-4826518 Msa0751300:intron 30.0%
GCAAGCTATGAAAAATACTT+GGG + chr5_2:4826500-4826519 Msa0751300:intron 30.0%
ATCGTAAACTATCTTGACTT+TGG + chr5_2:4826693-4826712 Msa0751300:intron 30.0%
TCGTAAACTATCTTGACTTT+GGG + chr5_2:4826694-4826713 Msa0751300:intron 30.0%
! TATTGGCAAAAATCCCTTTT+TGG + chr5_2:4826752-4826771 Msa0751300:intron 30.0%
TGTCATAGACTAACCAAAAA+GGG - chr5_2:4826768-4826787 None:intergenic 30.0%
!! CATATTGTTGGTTTCTTCAT+TGG + chr5_2:4826834-4826853 Msa0751300:intron 30.0%
! CTCATTTTGTTCAAGAGATT+AGG - chr5_2:4826896-4826915 None:intergenic 30.0%
TATCCAATTATGAGTGCATA+TGG + chr5_2:4827198-4827217 Msa0751300:intron 30.0%
TAACATTTCCCTTGGTATTA+TGG - chr5_2:4827379-4827398 None:intergenic 30.0%
!!! ACTATTTTGATACCGTCTAA+TGG - chr5_2:4827641-4827660 None:intergenic 30.0%
TAAAATAAACCTCATGTGCA+AGG - chr5_2:4827729-4827748 None:intergenic 30.0%
! TTTGAGGTTATCAATGAGAT+TGG - chr5_2:4827910-4827929 None:intergenic 30.0%
TCATTTCATGCACTAATTTG+AGG - chr5_2:4827926-4827945 None:intergenic 30.0%
!!! ATTTTTTGCACAGTTAACCA+TGG + chr5_2:4828132-4828151 Msa0751300:intron 30.0%
AAAATTAGTGGCAGAAATGA+TGG + chr5_2:4828248-4828267 Msa0751300:intron 30.0%
TGCACTAACTACAAATTATG+TGG + chr5_2:4828312-4828331 Msa0751300:intron 30.0%
GGACATCTTAAAGAAATAGT+TGG + chr5_2:4828446-4828465 Msa0751300:intron 30.0%
AACCATGCTTGAATGTATTT+GGG + chr5_2:4828484-4828503 Msa0751300:intron 30.0%
! TGCTCTGAATTATGTGTAAA+TGG - chr5_2:4828585-4828604 None:intergenic 30.0%
! TCATTCTCTATGACTTTTAC+AGG - chr5_2:4828910-4828929 None:intergenic 30.0%
CATCTGCAGTTCAAATATAT+TGG - chr5_2:4828985-4829004 None:intergenic 30.0%
TATTTGAACTGCAGATGTAT+TGG + chr5_2:4828988-4829007 Msa0751300:intron 30.0%
CATGCAAAATAATACTACCA+TGG + chr5_2:4829242-4829261 Msa0751300:intron 30.0%
!! TTCTGACCTTGATGATGTAA+TGG + chr5_2:4818216-4818235 Msa0751300:CDS 35.0%
!! TGTTTCCTGCTTTTATCTTC+AGG - chr5_2:4818403-4818422 None:intergenic 35.0%
CTTGTCGATGTTGAAAATGT+TGG + chr5_2:4818547-4818566 Msa0751300:CDS 35.0%
!! AGGAAGTATTTGGTCATGAA+AGG + chr5_2:4818619-4818638 Msa0751300:intron 35.0%
TTCATGTATGTGAGCTTCAT+AGG + chr5_2:4820151-4820170 Msa0751300:intron 35.0%
ATGCATATTCAAGTCAACCA+TGG + chr5_2:4820189-4820208 Msa0751300:intron 35.0%
TAGAGTTAAAGGAAGTTGCA+CGG - chr5_2:4820283-4820302 None:intergenic 35.0%
AGAGTCTTGGAGATGAAAAA+AGG - chr5_2:4820315-4820334 None:intergenic 35.0%
TTAGGCTATTTACAGAGTCT+TGG - chr5_2:4820328-4820347 None:intergenic 35.0%
GGCTATTTATAAAGTCATGG+AGG - chr5_2:4820370-4820389 None:intergenic 35.0%
!! TTCTGACCTTGATGATGTAA+TGG + chr5_2:4818216-4818235 Msa0751300:CDS 35.0%
TGCCATAATGATCATGCTAT+TGG + chr5_2:4820673-4820692 Msa0751300:CDS 35.0%
GCCATAATGATCATGCTATT+GGG + chr5_2:4820674-4820693 Msa0751300:CDS 35.0%
ACCCAATAGCATGATCATTA+TGG - chr5_2:4820678-4820697 None:intergenic 35.0%
!! GTTCTTGGCTCTAAATATTG+GGG + chr5_2:4820763-4820782 Msa0751300:CDS 35.0%
! GCTCTAAATATTGGGGTAAA+GGG + chr5_2:4820770-4820789 Msa0751300:CDS 35.0%
TGCTGTGAAACAAATGGTTA+AGG + chr5_2:4820804-4820823 Msa0751300:CDS 35.0%
GTGAATTTCCATACTTGGAA+AGG + chr5_2:4820836-4820855 Msa0751300:CDS 35.0%
CAAAGAGTAGTTGAGAAAGT+TGG + chr5_2:4820895-4820914 Msa0751300:CDS 35.0%
!!! GAAAGTTGGTTTTCAAAACG+AGG + chr5_2:4820909-4820928 Msa0751300:CDS 35.0%
AGCAGAGATATGATCATGTT+CGG + chr5_2:4818646-4818665 Msa0751300:intron 35.0%
AACTAAGAAGAGTTCCCAAT+AGG + chr5_2:4821315-4821334 Msa0751300:intron 35.0%
GGCAAAATTGGAATTTCACA+TGG - chr5_2:4821395-4821414 None:intergenic 35.0%
! ATTCCAATTTTGCCCATATG+AGG + chr5_2:4821401-4821420 Msa0751300:intron 35.0%
! TTCCAATTTTGCCCATATGA+GGG + chr5_2:4821402-4821421 Msa0751300:intron 35.0%
TACCAAATTGTCCCTCATAT+GGG - chr5_2:4821416-4821435 None:intergenic 35.0%
TTACCAAATTGTCCCTCATA+TGG - chr5_2:4821417-4821436 None:intergenic 35.0%
ATTCCATAATTCCATACCCT+TGG + chr5_2:4821436-4821455 Msa0751300:intron 35.0%
AGAGAAGTTGAAAAAAAGCC+GGG - chr5_2:4821600-4821619 None:intergenic 35.0%
TTTGGCCAAAAGTTGTTGAA+TGG + chr5_2:4821716-4821735 Msa0751300:intron 35.0%
GCTTGTGAAATAAATTGTCG+AGG - chr5_2:4821759-4821778 None:intergenic 35.0%
ATATTCGTGAGGTTGAAGAA+AGG - chr5_2:4822025-4822044 None:intergenic 35.0%
CATATCTTAATCTCCCACAA+CGG - chr5_2:4822241-4822260 None:intergenic 35.0%
AAACTGAATGGAATGAGCTT+TGG + chr5_2:4822369-4822388 Msa0751300:intron 35.0%
! CATCTCTTTTCAATTCACGT+TGG + chr5_2:4822449-4822468 Msa0751300:intron 35.0%
TGTGTGTGTATATATTAGCG+AGG - chr5_2:4822731-4822750 None:intergenic 35.0%
! AAACATTGCTCTAAACGCTA+AGG - chr5_2:4822754-4822773 None:intergenic 35.0%
!! CTAGTCTTGATTGCCAAATA+AGG + chr5_2:4823047-4823066 Msa0751300:intron 35.0%
!! GGTACATGTGCCATTTAAAA+TGG + chr5_2:4823175-4823194 Msa0751300:intron 35.0%
GCATAAATATATGCCAAGTC+CGG + chr5_2:4823868-4823887 Msa0751300:intron 35.0%
CATAAATATATGCCAAGTCC+GGG + chr5_2:4823869-4823888 Msa0751300:intron 35.0%
ATAAATATATGCCAAGTCCG+GGG + chr5_2:4823870-4823889 Msa0751300:intron 35.0%
!!! CGTTTGGCGAAAGTTTTTTA+CGG - chr5_2:4824060-4824079 None:intergenic 35.0%
CGTAAAAAACTTTCGCCAAA+CGG + chr5_2:4824058-4824077 Msa0751300:intron 35.0%
! AGTTTTTGCTTCATCATAGG+TGG + chr5_2:4824225-4824244 Msa0751300:intron 35.0%
TGTTATGTGGAGTATAGTAG+AGG + chr5_2:4824366-4824385 Msa0751300:intron 35.0%
TACACCAATCAACTTTCGTA+CGG - chr5_2:4824556-4824575 None:intergenic 35.0%
TTGGTTTCTTTCTCGGATTT+AGG + chr5_2:4824969-4824988 Msa0751300:intron 35.0%
TGGTTTCTTTCTCGGATTTA+GGG + chr5_2:4824970-4824989 Msa0751300:intron 35.0%
GATATAGAGAATTGGAGCAT+TGG + chr5_2:4825016-4825035 Msa0751300:intron 35.0%
!!! TGTTTTTGGTTCTGGTACAA+AGG + chr5_2:4825125-4825144 Msa0751300:intron 35.0%
TTCAACACAATGATCGTACA+CGG - chr5_2:4825357-4825376 None:intergenic 35.0%
AGATGTATTTCCTTATGCAG+TGG + chr5_2:4825451-4825470 Msa0751300:intron 35.0%
GATGTATTTCCTTATGCAGT+GGG + chr5_2:4825452-4825471 Msa0751300:intron 35.0%
AAGAACTCAAGGTAAGTAGA+TGG - chr5_2:4825530-4825549 None:intergenic 35.0%
AAATGGAAGCAAAGAACTCA+AGG - chr5_2:4825541-4825560 None:intergenic 35.0%
! TGCTTCCATTTTGTAGTCAA+TGG + chr5_2:4825550-4825569 Msa0751300:intron 35.0%
GTCTTAAACTTCTCAACAAC+CGG - chr5_2:4825634-4825653 None:intergenic 35.0%
TTTCCAATCTGTCTCAAGTT+AGG + chr5_2:4825849-4825868 Msa0751300:intron 35.0%
TAATACCATCCAAACTGGTT+AGG - chr5_2:4826048-4826067 None:intergenic 35.0%
TCTCATAATACCATCCAAAC+TGG - chr5_2:4826053-4826072 None:intergenic 35.0%
CATTGATGTCTTCGAACATT+TGG - chr5_2:4826082-4826101 None:intergenic 35.0%
TCGAAGACATCAATGTCAAA+TGG + chr5_2:4826087-4826106 Msa0751300:intron 35.0%
CTAGCTATAAATTCACATGC+AGG + chr5_2:4826112-4826131 Msa0751300:intron 35.0%
CAACAATGTTAATTGGCCAA+CGG + chr5_2:4826160-4826179 Msa0751300:intron 35.0%
TCAAGATAAATGCATGCATG+TGG - chr5_2:4826198-4826217 None:intergenic 35.0%
ACTTATACTTTCTCTGTGTC+TGG - chr5_2:4826457-4826476 None:intergenic 35.0%
AGCTATGAAAAATACTTGGG+TGG + chr5_2:4826503-4826522 Msa0751300:intron 35.0%
GCTATGAAAAATACTTGGGT+GGG + chr5_2:4826504-4826523 Msa0751300:intron 35.0%
GTGTCATAGACTAACCAAAA+AGG - chr5_2:4826769-4826788 None:intergenic 35.0%
! TAGACAGTCTAAGGTGTAAT+TGG - chr5_2:4827309-4827328 None:intergenic 35.0%
TTTGCCTTACTGATACTTCT+TGG - chr5_2:4827336-4827355 None:intergenic 35.0%
CAGTAAGGCAAATCCATATA+AGG + chr5_2:4827344-4827363 Msa0751300:intron 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG - chr5_2:4827409-4827428 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG - chr5_2:4827410-4827429 None:intergenic 35.0%
CATGTTAAGCAACCCAAAAA+TGG - chr5_2:4827524-4827543 None:intergenic 35.0%
ATAACGTATAGGCCATTAGA+CGG + chr5_2:4827626-4827645 Msa0751300:intron 35.0%
TATTATCGCATTGAGAAGGA+TGG + chr5_2:4827700-4827719 Msa0751300:intron 35.0%
ATTATCGCATTGAGAAGGAT+GGG + chr5_2:4827701-4827720 Msa0751300:intron 35.0%
ATAATGAGCAGGTTTACTTG+AGG + chr5_2:4828035-4828054 Msa0751300:intron 35.0%
TAATGAGCAGGTTTACTTGA+GGG + chr5_2:4828036-4828055 Msa0751300:intron 35.0%
AGAACCTTCTTACATGTAGA+AGG + chr5_2:4828085-4828104 Msa0751300:intron 35.0%
GAACCTTCTTACATGTAGAA+GGG + chr5_2:4828086-4828105 Msa0751300:intron 35.0%
!! ATGGTTTAGTTTGTCAGCAA+GGG - chr5_2:4828170-4828189 None:intergenic 35.0%
AAATGCTTCCACATGAATTG+AGG + chr5_2:4828192-4828211 Msa0751300:intron 35.0%
AATGAGCAGGTTTAATTGAG+AGG + chr5_2:4828363-4828382 Msa0751300:intron 35.0%
ATGAGCAGGTTTAATTGAGA+GGG + chr5_2:4828364-4828383 Msa0751300:intron 35.0%
TGGGAACTTTCCAATATATG+AGG + chr5_2:4828409-4828428 Msa0751300:intron 35.0%
CAACCATGCTTGAATGTATT+TGG + chr5_2:4828483-4828502 Msa0751300:intron 35.0%
ATCCCAAATACATTCAAGCA+TGG - chr5_2:4828489-4828508 None:intergenic 35.0%
CAGAGCAGAACATTAATTAC+CGG + chr5_2:4828598-4828617 Msa0751300:intron 35.0%
ATACAAACTGCCATTCAGAA+AGG + chr5_2:4828749-4828768 Msa0751300:intron 35.0%
GAATGACGACTAAACATCAT+CGG + chr5_2:4828924-4828943 Msa0751300:intron 35.0%
AATGACGACTAAACATCATC+GGG + chr5_2:4828925-4828944 Msa0751300:intron 35.0%
! GTACTCTTTTATCTGTTCAG+TGG + chr5_2:4829010-4829029 Msa0751300:intron 35.0%
! GATGAAATGAGCATTGTATG+TGG - chr5_2:4829048-4829067 None:intergenic 35.0%
!!! CTATGTTTTGTTTCCTCATC+TGG - chr5_2:4829136-4829155 Msa0751310:three_prime_UTR 35.0%
!! TTGAAAGTACTTGTAGCCAA+AGG + chr5_2:4829188-4829207 Msa0751300:intron 35.0%
! ATGGTTCGTTTAAGTTTCCA+TGG - chr5_2:4829262-4829281 Msa0751310:three_prime_UTR 35.0%
ACACAGAAGCAAAGTTACAT+CGG + chr5_2:4829301-4829320 Msa0751300:intron 35.0%
TTCCCATTCACATTGTTTGT+AGG + chr5_2:4829403-4829422 Msa0751300:intron 35.0%
AGCCTACAAACAATGTGAAT+GGG - chr5_2:4829408-4829427 Msa0751310:three_prime_UTR 35.0%
AAGCCTACAAACAATGTGAA+TGG - chr5_2:4829409-4829428 Msa0751310:three_prime_UTR 35.0%
!!! TGACTGAAGTCTTTTTTGCA+CGG - chr5_2:4829545-4829564 Msa0751310:exon 35.0%
GATATGGTGTACTGTATACT+TGG - chr5_2:4829571-4829590 Msa0751310:CDS 35.0%
GGTCAGAAAGATTAAAGGGT+CGG - chr5_2:4818204-4818223 None:intergenic 40.0%
!! ACCTTGATGATGTAATGGTG+TGG + chr5_2:4818221-4818240 Msa0751300:CDS 40.0%
! TGCATTGATGATCGTGCTAT+TGG + chr5_2:4818358-4818377 Msa0751300:CDS 40.0%
TCACACCTGAAGATAAAAGC+AGG + chr5_2:4818395-4818414 Msa0751300:CDS 40.0%
AGGAAACAATCTGCAGAACT+TGG + chr5_2:4818415-4818434 Msa0751300:CDS 40.0%
AGCTCTATATATTGGGGCAA+AGG + chr5_2:4818448-4818467 Msa0751300:CDS 40.0%
GCTCTATATATTGGGGCAAA+GGG + chr5_2:4818449-4818468 Msa0751300:CDS 40.0%
! AAAGCTGGTTTCCAAAAGGA+GGG + chr5_2:4818589-4818608 Msa0751300:CDS 40.0%
!! GGGAGTTCTTAGGAAGTATT+TGG + chr5_2:4818609-4818628 Msa0751300:CDS 40.0%
! GAGGTTTGCCTTGTTAAGAA+AGG + chr5_2:4818788-4818807 Msa0751300:intron 40.0%
CTGCTTATGCTTATGTCTAG+AGG + chr5_2:4818884-4818903 Msa0751300:intron 40.0%
ATGCATCCTAGGAAGATCAA+AGG + chr5_2:4819024-4819043 Msa0751300:intron 40.0%
ACTTTGTAGAGAGCAGAAAC+AGG - chr5_2:4819178-4819197 None:intergenic 40.0%
!!! TTTTTTTCTTAGGTGGGTCG+CGG + chr5_2:4819694-4819713 Msa0751300:intron 40.0%
GGAGTTTCTCATAAACAGCA+TGG - chr5_2:4819721-4819740 None:intergenic 40.0%
GTATGTGAGCTTCATAGGTT+TGG + chr5_2:4820156-4820175 Msa0751300:intron 40.0%
AAGGGAAGTAAGGGATTTCA+AGG - chr5_2:4820229-4820248 None:intergenic 40.0%
GGAAGATCGAGTAGAGTTAA+AGG - chr5_2:4820294-4820313 None:intergenic 40.0%
ATGATCTCTTCATTGGCACA+TGG - chr5_2:4820475-4820494 None:intergenic 40.0%
GGTCAGAAAGATGAAGATGT+CGG - chr5_2:4820519-4820538 None:intergenic 40.0%
!! ACCTTGATGATGTAATGGTG+TGG + chr5_2:4818221-4818240 Msa0751300:CDS 40.0%
ATGAAAAGGTAGCCAAGTTC+TGG + chr5_2:4820569-4820588 Msa0751300:CDS 40.0%
TGAAAAGGTAGCCAAGTTCT+GGG + chr5_2:4820570-4820589 Msa0751300:CDS 40.0%
GCAGAAATTGGGTATGTTCT+TGG + chr5_2:4820748-4820767 Msa0751300:CDS 40.0%
!! GGCTCTAAATATTGGGGTAA+AGG + chr5_2:4820769-4820788 Msa0751300:CDS 40.0%
CATTTGTTTCACAGCAAACG+TGG - chr5_2:4820800-4820819 None:intergenic 40.0%
!! CACGTTTGCTGTGAAACAAA+TGG + chr5_2:4820798-4820817 Msa0751300:CDS 40.0%
TTCAAAACGAGGGAGTTCTT+AGG + chr5_2:4820920-4820939 Msa0751300:CDS 40.0%
! TCTCCAAGGGTATGGAATTA+TGG - chr5_2:4821442-4821461 None:intergenic 40.0%
GATACCTTAATCTCCCACAA+CGG - chr5_2:4821571-4821590 None:intergenic 40.0%
!! GATTAAGGTATCGTTTGACC+CGG + chr5_2:4821579-4821598 Msa0751300:intron 40.0%
!!! ACCTTTTTTCAACTCACGCT+AGG + chr5_2:4821779-4821798 Msa0751300:intron 40.0%
! TCCTAGCGTGAGTTGAAAAA+AGG - chr5_2:4821783-4821802 None:intergenic 40.0%
CGTTGTGGGAGATTAAGATA+TGG + chr5_2:4822239-4822258 Msa0751300:intron 40.0%
TTTGGCAATCAAGACTAGCA+AGG - chr5_2:4823045-4823064 None:intergenic 40.0%
CAGATCTACGATTGTGAACA+TGG - chr5_2:4823105-4823124 None:intergenic 40.0%
CATGTTCACAATCGTAGATC+TGG + chr5_2:4823103-4823122 Msa0751300:intron 40.0%
GAGAAACAATTTAAGGAGCC+TGG - chr5_2:4823620-4823639 None:intergenic 40.0%
CAAACGGTATCTAAGTTCAG+CGG + chr5_2:4824074-4824093 Msa0751300:intron 40.0%
AAACGGTATCTAAGTTCAGC+GGG + chr5_2:4824075-4824094 Msa0751300:intron 40.0%
CAATCAACTCAAGTCATGCA+TGG - chr5_2:4824165-4824184 None:intergenic 40.0%
!! AGGGGTTCATTTTTCGACAT+TGG + chr5_2:4824199-4824218 Msa0751300:intron 40.0%
TTCGTACGGCTCAATGATAT+AGG - chr5_2:4824542-4824561 None:intergenic 40.0%
! GAAAATTGGATTTGGAGTGC+TGG + chr5_2:4824817-4824836 Msa0751300:intron 40.0%
!! TAGAGAATTGGAGCATTGGA+AGG + chr5_2:4825020-4825039 Msa0751300:intron 40.0%
TTCCTTATGCAGTGGGAATA+TGG + chr5_2:4825459-4825478 Msa0751300:intron 40.0%
AACCATATTCCCACTGCATA+AGG - chr5_2:4825464-4825483 None:intergenic 40.0%
! GGTTGCCATTGACTACAAAA+TGG - chr5_2:4825558-4825577 None:intergenic 40.0%
ACTCATCAACCTACATCATC+CGG + chr5_2:4825612-4825631 Msa0751300:intron 40.0%
!! GAAGAGCTTGAGAAGTGTTA+AGG - chr5_2:4825774-4825793 None:intergenic 40.0%
TCAATCCTAACCAGTTTGGA+TGG + chr5_2:4826040-4826059 Msa0751300:intron 40.0%
GTGGTATATATGTACTCCGT+TGG - chr5_2:4826179-4826198 None:intergenic 40.0%
CGTTTGGGAAATGCTAAACA+GGG - chr5_2:4826379-4826398 None:intergenic 40.0%
TCGTTTGGGAAATGCTAAAC+AGG - chr5_2:4826380-4826399 None:intergenic 40.0%
TGTTTAGCATTTCCCAAACG+AGG + chr5_2:4826379-4826398 Msa0751300:intron 40.0%
TTGTTCTTGACACCTCGTTT+GGG - chr5_2:4826394-4826413 None:intergenic 40.0%
ATTGTTCTTGACACCTCGTT+TGG - chr5_2:4826395-4826414 None:intergenic 40.0%
!!! TTGCTTTTTCGGTGGTAATG+AGG - chr5_2:4826484-4826503 None:intergenic 40.0%
!!! TTCATAGCTTGCTTTTTCGG+TGG - chr5_2:4826492-4826511 None:intergenic 40.0%
ACTCGAACATGCAAGTTCTT+CGG - chr5_2:4826602-4826621 None:intergenic 40.0%
TCAGCAGCAAAGATCTACTT+TGG - chr5_2:4826629-4826648 None:intergenic 40.0%
!!! ACTATTTTGGCGTATCGCTT+TGG + chr5_2:4826664-4826683 Msa0751300:intron 40.0%
CTGCCATATGCACTCATAAT+TGG - chr5_2:4827204-4827223 None:intergenic 40.0%
CCTTACTGATACTTCTTGGA+CGG - chr5_2:4827332-4827351 None:intergenic 40.0%
GCACAAGTTAACATTTCCCT+TGG - chr5_2:4827387-4827406 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr5_2:4827392-4827411 Msa0751300:intron 40.0%
TTGCTTAACATGTGCCCTAA+GGG + chr5_2:4827532-4827551 Msa0751300:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr5_2:4827549-4827568 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr5_2:4827550-4827569 None:intergenic 40.0%
! GTTTAATTTCGCGTCAAGGA+TGG - chr5_2:4827846-4827865 None:intergenic 40.0%
! CATGGTTTAATTTCGCGTCA+AGG - chr5_2:4827850-4827869 None:intergenic 40.0%
CTGAATTCTTCTGCTGCTAT+TGG - chr5_2:4827873-4827892 None:intergenic 40.0%
AGCATGCACTACATCTTATG+TGG + chr5_2:4827986-4828005 Msa0751300:intron 40.0%
ATCCATCTGTCATAATGAGC+AGG + chr5_2:4828024-4828043 Msa0751300:intron 40.0%
AACCTGCTCATTATGACAGA+TGG - chr5_2:4828029-4828048 None:intergenic 40.0%
AATGAGCAGGTTTACTTGAG+GGG + chr5_2:4828037-4828056 Msa0751300:intron 40.0%
!! CATGGTTTAGTTTGTCAGCA+AGG - chr5_2:4828171-4828190 None:intergenic 40.0%
CTTGCTGACAAACTAAACCA+TGG + chr5_2:4828169-4828188 Msa0751300:intron 40.0%
!! TTCATGTGGAAGCATTTCCA+TGG - chr5_2:4828189-4828208 None:intergenic 40.0%
! GCACTTTTCCTCAATTCATG+TGG - chr5_2:4828203-4828222 None:intergenic 40.0%
AGTCTTCTGTTACAATGAGC+AGG + chr5_2:4828350-4828369 Msa0751300:intron 40.0%
CCAATATATGAGGTTGCTTG+CGG + chr5_2:4828419-4828438 Msa0751300:intron 40.0%
TATACATCCGGTCTAAACCA+TGG + chr5_2:4828514-4828533 Msa0751300:intron 40.0%
ATACATCCGGTCTAAACCAT+GGG + chr5_2:4828515-4828534 Msa0751300:intron 40.0%
CATAATCCCATGGTTTAGAC+CGG - chr5_2:4828524-4828543 None:intergenic 40.0%
GCTCGACTCATGTATACTAT+GGG - chr5_2:4828550-4828569 None:intergenic 40.0%
TGCTCGACTCATGTATACTA+TGG - chr5_2:4828551-4828570 None:intergenic 40.0%
TTCACTGAATCGATGAATGC+CGG - chr5_2:4828620-4828639 None:intergenic 40.0%
!! GCATTCATCGATTCAGTGAA+TGG + chr5_2:4828620-4828639 Msa0751300:intron 40.0%
TTTGTTTCCTCATCTGGTGT+AGG - chr5_2:4829130-4829149 Msa0751310:three_prime_UTR 40.0%
TACTTGGTTGTGCTCTTTAC+TGG + chr5_2:4829343-4829362 Msa0751300:intron 40.0%
ACTTGGTTGTGCTCTTTACT+GGG + chr5_2:4829344-4829363 Msa0751300:intron 40.0%
ATGGTGTACTGTATACTTGG+AGG - chr5_2:4829568-4829587 Msa0751310:CDS 40.0%
TAAAGGGTCGGAGTGTGATT+TGG - chr5_2:4818192-4818211 None:intergenic 45.0%
GCCACACCATTACATCATCA+AGG - chr5_2:4818225-4818244 None:intergenic 45.0%
GGTGTGGCATACTGATGTAA+AGG + chr5_2:4818237-4818256 Msa0751300:CDS 45.0%
! TGTTGGGTCACAAAGAGTGT+TGG + chr5_2:4818564-4818583 Msa0751300:CDS 45.0%
!! CAAAGAGTGTTGGAGAAAGC+TGG + chr5_2:4818574-4818593 Msa0751300:CDS 45.0%
! GGAGAAAGCTGGTTTCCAAA+AGG + chr5_2:4818585-4818604 Msa0751300:CDS 45.0%
! GAAAGCTGGTTTCCAAAAGG+AGG + chr5_2:4818588-4818607 Msa0751300:CDS 45.0%
TCCAAAAGGAGGGAGTTCTT+AGG + chr5_2:4818599-4818618 Msa0751300:CDS 45.0%
! TCCTAAGAACTCCCTCCTTT+TGG - chr5_2:4818603-4818622 None:intergenic 45.0%
GATCTTCCTAGGATGCATGT+TGG - chr5_2:4819022-4819041 None:intergenic 45.0%
GGATGGATAGGCATCACTTA+CGG - chr5_2:4819157-4819176 None:intergenic 45.0%
AGAGCAGAAACAGGATGGAT+AGG - chr5_2:4819169-4819188 None:intergenic 45.0%
TGTAGAGAGCAGAAACAGGA+TGG - chr5_2:4819174-4819193 None:intergenic 45.0%
!! TGAGTGTCGACACAGTATGA+AGG + chr5_2:4819610-4819629 Msa0751300:intron 45.0%
TCGACACAGTATGAAGGCAA+GGG + chr5_2:4819616-4819635 Msa0751300:intron 45.0%
AGGTTGCTTCATGTCTACCA+TGG - chr5_2:4820209-4820228 None:intergenic 45.0%
ACGCAAGGAAAGGGAAGTAA+GGG - chr5_2:4820238-4820257 None:intergenic 45.0%
GTTAGGATCACGCAAGGAAA+GGG - chr5_2:4820247-4820266 None:intergenic 45.0%
AGTTAGGATCACGCAAGGAA+AGG - chr5_2:4820248-4820267 None:intergenic 45.0%
ACGGAAGAAAGGTCGAAGTT+AGG - chr5_2:4820264-4820283 None:intergenic 45.0%
AAGGAAGTTGCACGGAAGAA+AGG - chr5_2:4820275-4820294 None:intergenic 45.0%
CTCTTCATTGGCACATGGTT+TGG - chr5_2:4820470-4820489 None:intergenic 45.0%
GAAGATGTCGGAGTGTGATT+TGG - chr5_2:4820507-4820526 None:intergenic 45.0%
GCCACACCATTACATCATCA+AGG - chr5_2:4818225-4818244 None:intergenic 45.0%
GTGGCAGTAGACTGATGAAA+AGG + chr5_2:4820555-4820574 Msa0751300:intron 45.0%
GAAAAGGTAGCCAAGTTCTG+GGG + chr5_2:4820571-4820590 Msa0751300:CDS 45.0%
! AAAAGGTAGCCAAGTTCTGG+GGG + chr5_2:4820572-4820591 Msa0751300:CDS 45.0%
CCTTCGTCTTTGCTAGTGTA+AGG - chr5_2:4820601-4820620 None:intergenic 45.0%
CCTTACACTAGCAAAGACGA+AGG + chr5_2:4820598-4820617 Msa0751300:CDS 45.0%
GCTTCAAGCCTTTCCAAGTA+TGG - chr5_2:4820847-4820866 None:intergenic 45.0%
GCTTGAAGCTCTTGTTGATG+TGG + chr5_2:4820858-4820877 Msa0751300:CDS 45.0%
GTCCCTCATATGGGCAAAAT+TGG - chr5_2:4821407-4821426 None:intergenic 45.0%
TGCCCATATGAGGGACAATT+TGG + chr5_2:4821411-4821430 Msa0751300:intron 45.0%
TTGCTTCTACATTGCCGTTG+TGG + chr5_2:4821554-4821573 Msa0751300:intron 45.0%
TGCTTCTACATTGCCGTTGT+GGG + chr5_2:4821555-4821574 Msa0751300:intron 45.0%
ATTGCCGTTGTGGGAGATTA+AGG + chr5_2:4821564-4821583 Msa0751300:intron 45.0%
GTGAGCTTAGCTCAGTTGAT+AGG + chr5_2:4823839-4823858 Msa0751300:intron 45.0%
CGCTGAACTTAGATACCGTT+TGG - chr5_2:4824076-4824095 None:intergenic 45.0%
AACGGTATCTAAGTTCAGCG+GGG + chr5_2:4824076-4824095 Msa0751300:intron 45.0%
! TGAGCCGTACGAAAGTTGAT+TGG + chr5_2:4824549-4824568 Msa0751300:intron 45.0%
!! GATTTGGAGTGCTGGATTCT+TGG + chr5_2:4824825-4824844 Msa0751300:intron 45.0%
! GCATTGGAAGGCTTTGATTG+AGG + chr5_2:4825032-4825051 Msa0751300:intron 45.0%
TCTCAACAACCGGATGATGT+AGG - chr5_2:4825624-4825643 None:intergenic 45.0%
TGGCCTAACTTGAGACAGAT+TGG - chr5_2:4825855-4825874 None:intergenic 45.0%
AAAAATACTTGGGTGGGCAG+TGG + chr5_2:4826510-4826529 Msa0751300:intron 45.0%
TTTCTGCAGAGAACGTGTGA+TGG + chr5_2:4826538-4826557 Msa0751300:intron 45.0%
! AGAGAACGTGTGATGGAAGA+AGG + chr5_2:4826545-4826564 Msa0751300:intron 45.0%
TGGCAGCTTCTACACAAATG+AGG + chr5_2:4827218-4827237 Msa0751300:intron 45.0%
CTACACAAATGAGGCACACT+TGG + chr5_2:4827227-4827246 Msa0751300:intron 45.0%
!! CCGTCCAAGAAGTATCAGTA+AGG + chr5_2:4827329-4827348 Msa0751300:intron 45.0%
GTTGCTTAACATGTGCCCTA+AGG + chr5_2:4827531-4827550 Msa0751300:intron 45.0%
TTCTTCTGCTGCTATTGGCA+TGG - chr5_2:4827868-4827887 None:intergenic 45.0%
CAACCTTACAAACACACCCA+GGG + chr5_2:4828060-4828079 Msa0751300:intron 45.0%
TGTAAGAAGGTTCTCACCCT+GGG - chr5_2:4828079-4828098 None:intergenic 45.0%
ATGTAAGAAGGTTCTCACCC+TGG - chr5_2:4828080-4828099 None:intergenic 45.0%
GTGCCCTTCTACATGTAAGA+AGG - chr5_2:4828092-4828111 None:intergenic 45.0%
!! GTTTAGTTTGTCAGCAAGGG+CGG - chr5_2:4828167-4828186 None:intergenic 45.0%
GAACCTTAGAAACCACCTCA+GGG + chr5_2:4828386-4828405 Msa0751300:intron 45.0%
CCGCAAGCAACCTCATATAT+TGG - chr5_2:4828422-4828441 None:intergenic 45.0%
TATATGAGGTTGCTTGCGGA+AGG + chr5_2:4828423-4828442 Msa0751300:intron 45.0%
ATATGAGGTTGCTTGCGGAA+GGG + chr5_2:4828424-4828443 Msa0751300:intron 45.0%
CGGTCTAAACCATGGGATTA+TGG + chr5_2:4828522-4828541 Msa0751300:intron 45.0%
CAAATAGCTGTCAATGCCTG+TGG - chr5_2:4828788-4828807 None:intergenic 45.0%
! TCTTTACTGGGCATTGCATG+AGG + chr5_2:4829356-4829375 Msa0751300:intron 45.0%
TCCCTCTGCAGTGTATTCAT+CGG - chr5_2:4829441-4829460 Msa0751310:three_prime_UTR 45.0%
GATATGCCTCACAGCAAGAA+CGG + chr5_2:4829459-4829478 Msa0751300:CDS 45.0%
! TTTTTGCACGGCGTGGAATT+TGG - chr5_2:4829533-4829552 Msa0751310:three_prime_UTR 45.0%
ATTTGTGCGCGTAGGTGATA+TGG - chr5_2:4829587-4829606 Msa0751310:CDS 45.0%
!!! TAATTTTTTTAAAACAAAAA+AGG + chr5_2:4819643-4819662 Msa0751300:intron 5.0%
!!! AATTTTTTTAAAACAAAAAA+GGG + chr5_2:4819644-4819663 Msa0751300:intron 5.0%
!!! TTTTTAATAAATTATTGATT+TGG - chr5_2:4819826-4819845 None:intergenic 5.0%
!! AATCAATAATTTATTAAAAA+TGG + chr5_2:4819826-4819845 Msa0751300:intron 5.0%
!!! TTACTTTTTTATTAATTTAT+TGG + chr5_2:4821106-4821125 Msa0751300:intron 5.0%
!! ATATTAAAAAATAAAAGAAA+AGG - chr5_2:4821807-4821826 None:intergenic 5.0%
!! AAAAAGATAATAAAATTAAA+TGG - chr5_2:4821880-4821899 None:intergenic 5.0%
!! ATATTAAAAAATAAAAGAAA+AGG - chr5_2:4821807-4821826 None:intergenic 5.0%
!! TTAAAAAAAATTAAATGAAA+CGG - chr5_2:4822545-4822564 None:intergenic 5.0%
!!! TATAAAAGTATAATTTTTTT+AGG - chr5_2:4822917-4822936 None:intergenic 5.0%
!!! TTGAATTTATTATTTTTTTA+TGG - chr5_2:4823911-4823930 None:intergenic 5.0%
!!! TTTGATTTATTTATATTTTT+TGG + chr5_2:4824950-4824969 Msa0751300:intron 5.0%
AGGTTGCCAAGTTCTGCTCT+TGG + chr5_2:4818257-4818276 Msa0751300:CDS 50.0%
GGTTGCCAAGTTCTGCTCTT+GGG + chr5_2:4818258-4818277 Msa0751300:CDS 50.0%
TGGTTCCCAAGAGCAGAACT+TGG - chr5_2:4818266-4818285 None:intergenic 50.0%
TGGATAGGCATCACTTACGG+TGG - chr5_2:4819154-4819173 None:intergenic 50.0%
! TTCAAGAGATGGCTTGTGCG+AGG - chr5_2:4819216-4819235 None:intergenic 50.0%
GTCGACACAGTATGAAGGCA+AGG + chr5_2:4819615-4819634 Msa0751300:intron 50.0%
CACGCAAGGAAAGGGAAGTA+AGG - chr5_2:4820239-4820258 None:intergenic 50.0%
GTCGAAGTTAGGATCACGCA+AGG - chr5_2:4820253-4820272 None:intergenic 50.0%
!! AAAGGTAGCCAAGTTCTGGG+GGG + chr5_2:4820573-4820592 Msa0751300:CDS 50.0%
AATGAGGTGGCACTCTCCAA+GGG - chr5_2:4821455-4821474 None:intergenic 50.0%
TAATGAGGTGGCACTCTCCA+AGG - chr5_2:4821456-4821475 None:intergenic 50.0%
TTGCTTCTACACTGCCGTTG+TGG + chr5_2:4822224-4822243 Msa0751300:intron 50.0%
TGCTTCTACACTGCCGTTGT+GGG + chr5_2:4822225-4822244 Msa0751300:intron 50.0%
TCAACTGAGCTAAGCTCACG+AGG - chr5_2:4823838-4823857 None:intergenic 50.0%
! GAACGTGTGATGGAAGAAGG+TGG + chr5_2:4826548-4826567 Msa0751300:intron 50.0%
TATTCAACCCGTGCGAAGCA+CGG + chr5_2:4827126-4827145 Msa0751300:intron 50.0%
TTACAAACCCGTGCTTCGCA+CGG - chr5_2:4827137-4827156 None:intergenic 50.0%
CTTGGACGGTAGACAGTCTA+AGG - chr5_2:4827318-4827337 None:intergenic 50.0%
GCAACCTTACAAACACACCC+AGG + chr5_2:4828059-4828078 Msa0751300:intron 50.0%
TCACCCTGGGTGTGTTTGTA+AGG - chr5_2:4828066-4828085 None:intergenic 50.0%
GGAACCTTAGAAACCACCTC+AGG + chr5_2:4828385-4828404 Msa0751300:intron 50.0%
CTTAGAAACCACCTCAGGGT+GGG + chr5_2:4828390-4828409 Msa0751300:intron 50.0%
ATTGGAAAGTTCCCACCCTG+AGG - chr5_2:4828404-4828423 None:intergenic 50.0%
TATGAGGTTGCTTGCGGAAG+GGG + chr5_2:4828425-4828444 Msa0751300:intron 50.0%
! CTATGGGTGCCATAATCCCA+TGG - chr5_2:4828534-4828553 None:intergenic 50.0%
GGGATGAGGTCCTTTCTGAA+TGG - chr5_2:4828762-4828781 None:intergenic 50.0%
AATGCCTGTGGTAAGGGATG+AGG - chr5_2:4828776-4828795 None:intergenic 50.0%
GCTGTCAATGCCTGTGGTAA+GGG - chr5_2:4828782-4828801 None:intergenic 50.0%
AGCTGTCAATGCCTGTGGTA+AGG - chr5_2:4828783-4828802 None:intergenic 50.0%
ATCATCGGGCATCAGATCCA+TGG + chr5_2:4828939-4828958 Msa0751300:intron 50.0%
TCTGGTGTAGGCAAAGTGAC+AGG - chr5_2:4829118-4829137 Msa0751310:three_prime_UTR 50.0%
CACTTTGCCTACACCAGATG+AGG + chr5_2:4829120-4829139 Msa0751300:intron 50.0%
CGAACCATGAGCTAAAGCAG+CGG + chr5_2:4829274-4829293 Msa0751300:intron 50.0%
! TGATCCGCTGCTTTAGCTCA+TGG - chr5_2:4829281-4829300 Msa0751310:three_prime_UTR 50.0%
GCATGAGGTAATCGTCAAGC+TGG + chr5_2:4829371-4829390 Msa0751300:intron 50.0%
CCCTCTGCAGTGTATTCATC+GGG - chr5_2:4829440-4829459 Msa0751310:three_prime_UTR 50.0%
CCCGATGAATACACTGCAGA+GGG + chr5_2:4829437-4829456 Msa0751300:CDS 50.0%
! ACATCACCGTTCTTGCTGTG+AGG - chr5_2:4829468-4829487 Msa0751310:three_prime_UTR 50.0%
! GCTTGCTGCTGAACAGGAAA+CGG - chr5_2:4829491-4829510 Msa0751310:three_prime_UTR 50.0%
!! TGTGAAGCTTGCTGCTGAAC+AGG - chr5_2:4829497-4829516 Msa0751310:three_prime_UTR 50.0%
!!! GAAGTCTTTTTTGCACGGCG+TGG - chr5_2:4829540-4829559 Msa0751310:exon 50.0%
CCATCGTCTCTGCTGGTGTA+TGG - chr5_2:4818286-4818305 None:intergenic 55.0%
CCATACACCAGCAGAGACGA+TGG + chr5_2:4818283-4818302 Msa0751300:CDS 55.0%
GTTGATGCCATCGTCTCTGC+TGG - chr5_2:4818293-4818312 None:intergenic 55.0%
GACACGCCAACATGCATCCT+AGG + chr5_2:4819013-4819032 Msa0751300:intron 55.0%
GTAAGGTTCCCCCCAGAACT+TGG - chr5_2:4820584-4820603 None:intergenic 55.0%
ACGTTGACCAGTGCGAAGCA+CGG - chr5_2:4821232-4821251 None:intergenic 55.0%
ATTCAACCCGTGCGAAGCAC+GGG + chr5_2:4827127-4827146 Msa0751300:intron 55.0%
TACAAACCCGTGCTTCGCAC+GGG - chr5_2:4827136-4827155 None:intergenic 55.0%
! GGATGGGTTCCTTGCACATG+AGG + chr5_2:4827717-4827736 Msa0751300:intron 55.0%
CCACCCTGAGGTGGTTTCTA+AGG - chr5_2:4828392-4828411 None:intergenic 55.0%
CCTTAGAAACCACCTCAGGG+TGG + chr5_2:4828389-4828408 Msa0751300:intron 55.0%
AGGACCTCATCCCTTACCAC+AGG + chr5_2:4828769-4828788 Msa0751300:intron 55.0%
GCCCGATGAATACACTGCAG+AGG + chr5_2:4829436-4829455 Msa0751300:CDS 55.0%
!! ACGGCGTGGAATTTGGCTCT+CGG - chr5_2:4829526-4829545 Msa0751310:three_prime_UTR 55.0%
GGCTTGTGCGAGGTGTGGAT+GGG - chr5_2:4819206-4819225 None:intergenic 60.0%
! TGGCTTGTGCGAGGTGTGGA+TGG - chr5_2:4819207-4819226 None:intergenic 60.0%
! GAGATGGCTTGTGCGAGGTG+TGG - chr5_2:4819211-4819230 None:intergenic 60.0%
CGTTGACCAGTGCGAAGCAC+GGG - chr5_2:4821231-4821250 None:intergenic 60.0%
GGTGGCACTCTCCAAGGGTA+TGG - chr5_2:4821450-4821469 None:intergenic 60.0%
GGAAAGTTCCCACCCTGAGG+TGG - chr5_2:4828401-4828420 None:intergenic 60.0%
CAAGTCCGGGGTTCGAACCC+CGG + chr5_2:4823882-4823901 Msa0751300:intron 65.0%
AAGGGCGGTGCATGCTGCCA+TGG - chr5_2:4828152-4828171 None:intergenic 65.0%
CGCGAACCCGTGCTTCGCAC+TGG + chr5_2:4821222-4821241 Msa0751300:intron 70.0%
CGGGGTTCGAACCCCGGACT+TGG - chr5_2:4823884-4823903 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr5_2:4823890-4823909 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 4818130 4829608 4818130 ID=Msa0751300;Name=Msa0751300
chr5_2 mRNA 4818130 4829608 4818130 ID=Msa0751300-mRNA-1;Parent=Msa0751300;Name=Msa0751300-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|0.66|1|1|3|0|354
chr5_2 exon 4818130 4818630 4818130 ID=Msa0751300-mRNA-1:exon:1894;Parent=Msa0751300-mRNA-1
chr5_2 exon 4820565 4820944 4820565 ID=Msa0751300-mRNA-1:exon:1895;Parent=Msa0751300-mRNA-1
chr5_2 exon 4829425 4829608 4829425 ID=Msa0751300-mRNA-1:exon:1896;Parent=Msa0751300-mRNA-1
chr5_2 CDS 4818130 4818630 4818130 ID=Msa0751300-mRNA-1:cds;Parent=Msa0751300-mRNA-1
chr5_2 CDS 4820565 4820944 4820565 ID=Msa0751300-mRNA-1:cds;Parent=Msa0751300-mRNA-1
chr5_2 CDS 4829425 4829608 4829425 ID=Msa0751300-mRNA-1:cds;Parent=Msa0751300-mRNA-1
Gene Sequence

>Msa0751300

ATGGAGGAAACTTTTATTTCTTCAAAATCATGTGTCAAAGAAGAGATCATTGATTTGAACCAAATCACACTCCGACCCTTTAATCTTTCTGACCTTGATGATGTAATGGTGTGGCATACTGATGTAAAGGTTGCCAAGTTCTGCTCTTGGGAACCATACACCAGCAGAGACGATGGCATCAACTTCATTGAAAATATAGAAAGCAAGTTTCTTTGTTGCAAAGCAATATGCATTGATGATCGTGCTATTGGTTGTATTCTTTTGTTCACACCTGAAGATAAAAGCAGGAAACAATCTGCAGAACTTGGCTATAATCTAAGCTCTATATATTGGGGCAAAGGGATTGTCACGTGTGCTGTGAAACAAATTATTAAGGTTGCATTCCATGAATTTTCATACTTGGAGAGGCTTGAAGCACTTGTCGATGTTGAAAATGTTGGGTCACAAAGAGTGTTGGAGAAAGCTGGTTTCCAAAAGGAGGGAGTTCTTAGGAAGTATTTGACTGATGAAAAGGTAGCCAAGTTCTGGGGGGAACCTTACACTAGCAAAGACGAAGGCATCAACTTCATTGAAAATATAGAAAGTGATTATCTACGTTGCGAAGCAATATGCCATAATGATCATGCTATTGGGTGTATTAAGTTGTTCTCAAGTTCACGTCATGATCTAAGCAGATTCAAATGTGCAGAAATTGGGTATGTTCTTGGCTCTAAATATTGGGGTAAAGGGATTACCACGTTTGCTGTGAAACAAATGGTTAAGGTTGCATTCAGTGAATTTCCATACTTGGAAAGGCTTGAAGCTCTTGTTGATGTGGATAATTTATGGTCGCAAAGAGTAGTTGAGAAAGTTGGTTTTCAAAACGAGGGAGTTCTTAGGAAGCTTAAGAAACGCCCGATGAATACACTGCAGAGGGATATGCCTCACAGCAAGAACGGTGATGTCCGTTTCCTGTTCAGCAGCAAGCTTCACAGCATATCCGAGAGCCAAATTCCACGCCGTGCAAAAAAGACTTCAGTCACCTCCAAGTATACAGTACACCATATCACCTACGCGCACAAATGA
Protein sequence

>Msa0751300

MEETFISSKSCVKEEIIDLNQITLRPFNLSDLDDVMVWHTDVKVAKFCSWEPYTSRDDGINFIENIESKFLCCKAICIDDRAIGCILLFTPEDKSRKQSAELGYNLSSIYWGKGIVTCAVKQIIKVAFHEFSYLERLEALVDVENVGSQRVLEKAGFQKEGVLRKYLTDEKVAKFWGEPYTSKDEGINFIENIESDYLRCEAICHNDHAIGCIKLFSSSRHDLSRFKCAEIGYVLGSKYWGKGITTFAVKQMVKVAFSEFPYLERLEALVDVDNLWSQRVVEKVGFQNEGVLRKLKKRPMNTLQRDMPHSKNGDVRFLFSSKLHSISESQIPRRAKKTSVTSKYTVHHITYAHK*