AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755860 MtrunA17_Chr2g0291651 75.000 96 21 2 92 186 68 161 3.34e-42 144
Msa0755860 MtrunA17_Chr5g0396491 88.406 69 8 0 203 271 413 481 1.20e-38 140
Msa0755860 MtrunA17_Chr4g0043521 67.708 96 28 2 92 186 66 159 6.62e-37 130
Msa0755860 MtrunA17_Chr4g0010211 55.789 95 39 2 91 184 2 94 3.62e-29 107
Msa0755860 MtrunA17_Chr4g0038851 69.565 69 21 0 203 271 404 472 4.71e-29 114
Msa0755860 MtrunA17_Chr4g0010271 57.292 96 38 2 92 186 64 157 4.80e-29 109
Msa0755860 MtrunA17_Chr1g0169851 66.197 71 24 0 92 162 15 85 1.05e-27 104
Msa0755860 MtrunA17_Chr1g0169861 57.292 96 38 2 92 186 114 207 1.47e-27 107
Msa0755860 MtrunA17_Chr7g0237521 66.197 71 24 0 92 162 64 134 1.78e-27 105
Msa0755860 MtrunA17_Chr7g0237561 55.208 96 40 2 92 186 64 157 3.04e-26 102
Msa0755860 MtrunA17_Chr2g0296021 60.563 71 28 0 92 162 64 134 3.28e-23 94.4
Msa0755860 MtrunA17_Chr1g0210521 40.000 115 47 4 92 186 64 176 2.98e-17 79.0
Msa0755860 MtrunA17_Chr3g0085681 44.118 68 37 1 203 270 372 438 1.28e-11 64.3
Msa0755860 MtrunA17_Chr7g0224271 40.909 66 39 0 203 268 608 673 3.23e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755860 AT2G33110.2 72.857 70 19 0 92 161 64 133 4.13e-31 114
Msa0755860 AT2G33120.1 61.458 96 34 2 92 186 64 157 5.56e-31 115
Msa0755860 AT2G33110.1 71.831 71 20 0 92 162 64 134 1.14e-30 114
Msa0755860 AT2G32670.1 76.056 71 17 0 92 162 129 199 2.03e-30 115
Msa0755860 AT2G33120.2 60.417 96 35 2 92 186 72 165 2.24e-30 114
Msa0755860 AT1G04750.1 60.417 96 35 2 92 186 64 157 2.41e-30 113
Msa0755860 AT1G04760.2 73.239 71 19 0 92 162 64 134 1.04e-29 112
Msa0755860 AT1G04760.1 73.239 71 19 0 92 162 64 134 1.04e-29 112
Msa0755860 AT1G50420.1 65.217 69 24 0 203 271 414 482 2.28e-25 104
Msa0755860 AT4G15780.1 61.972 71 27 0 92 162 65 135 1.55e-23 94.7
Msa0755860 AT1G04750.2 59.259 81 30 2 107 186 1 79 4.46e-23 92.4
Msa0755860 AT1G04750.4 59.259 81 30 2 107 186 1 79 4.46e-23 92.4
Msa0755860 AT1G04750.3 59.259 81 30 2 107 186 1 79 4.46e-23 92.4
Msa0755860 AT3G54300.3 38.462 117 46 4 92 186 64 176 1.41e-14 71.6
Msa0755860 AT3G54300.2 38.462 117 46 4 92 186 64 176 1.41e-14 71.6
Msa0755860 AT3G54300.1 38.462 117 46 4 92 186 64 176 1.41e-14 71.6

Find 76 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTCCTTGTTAAGGCTAT+TGG 0.247487 5_2:+9692104 None:intergenic
AATAGCCTTAACAAGGAGTT+TGG 0.289067 5_2:-9692102 Msa0755860:CDS
AATTCAGATTGGTACTCATT+TGG 0.311293 5_2:-9689785 Msa0755860:CDS
CCAAGAGGAAGAAGGGAAAT+TGG 0.317265 5_2:-9693257 Msa0755860:CDS
TGCATATGTTCCTTCAACTT+TGG 0.333932 5_2:+9691994 None:intergenic
CCAATTTCCCTTCTTCCTCT+TGG 0.334831 5_2:+9693257 None:intergenic
AACTCCTTGTTAAGGCTATT+GGG 0.344900 5_2:+9692105 None:intergenic
ATTCAGATTGGTACTCATTT+GGG 0.369367 5_2:-9689784 Msa0755860:CDS
AGACTTGATTCCTGTGGATT+TGG 0.369989 5_2:-9689106 Msa0755860:CDS
AGAAGGTTTCTACAGGGTTA+TGG 0.375050 5_2:-9689046 Msa0755860:CDS
AAGGGAGGGAGAGGAGAAGA+AGG 0.375659 5_2:-9693325 Msa0755860:CDS
TGTGCAGCTGGGTATTGTGC+TGG 0.380986 5_2:-9692459 Msa0755860:intron
CCTTGAGGCTATTCCATTTG+TGG 0.382802 5_2:+9690427 None:intergenic
TATAGAATGAGAGAAGAAAA+TGG 0.386659 5_2:-9689013 Msa0755860:CDS
TTAATGCAGGTTACCACAAA+TGG 0.394064 5_2:-9690440 Msa0755860:intron
GCCTCAAGGGTTGATGGATA+TGG 0.399274 5_2:-9690413 Msa0755860:CDS
AGGGAAAGTGACGGGGAGAA+AGG 0.415410 5_2:-9693378 Msa0755860:CDS
TTATATGAACAAGTTGGTCT+TGG 0.432226 5_2:-9692765 Msa0755860:CDS
AAGAAAAGAAGAGGAAACAG+TGG 0.433575 5_2:-9693284 Msa0755860:CDS
CAGTATACGATAATAGCTTA+AGG 0.434273 5_2:+9689075 None:intergenic
TAGTAACCTGCTGGCAGGAC+AGG 0.439719 5_2:-9688985 Msa0755860:CDS
TGAACAAGTTGGTCTTGGTT+GGG 0.442711 5_2:-9692760 Msa0755860:CDS
GAACGAGAGAAGGGAGGGAG+AGG 0.446128 5_2:-9693334 Msa0755860:CDS
GGGGAGAAAGGGAAAGTGAC+GGG 0.449423 5_2:-9693366 Msa0755860:CDS
ATGAACAAGTTGGTCTTGGT+TGG 0.452022 5_2:-9692761 Msa0755860:CDS
GGGAAAGTGACGGGGAGAAA+GGG 0.453924 5_2:-9693377 Msa0755860:CDS
GGGAGAAAGGGAAAGTGACG+GGG 0.454412 5_2:-9693365 Msa0755860:CDS
AGGATATTATATGAACAAGT+TGG 0.456734 5_2:-9692771 Msa0755860:CDS
GGAATAGCCTCAAGGGTTGA+TGG 0.463256 5_2:-9690419 Msa0755860:CDS
AACTAGAAGACAGGTTCCTA+TGG 0.467041 5_2:-9692196 Msa0755860:CDS
GCAGGCAAGAAGGTTTCTAC+AGG 0.468697 5_2:-9689053 Msa0755860:CDS
GGGAGAAACAGAACGAGAGA+AGG 0.471024 5_2:-9693344 Msa0755860:CDS
CAACAACAGTGTGGAGAGCT+AGG 0.475812 5_2:-9688952 Msa0755860:CDS
TCTGCACAGGCCAAAGTTGA+AGG 0.478923 5_2:-9692004 Msa0755860:intron
AGTACCCAAACTCCTTGTTA+AGG 0.484076 5_2:+9692097 None:intergenic
ATCCTTGACACGCTCTAGAA+AGG 0.487141 5_2:+9692173 None:intergenic
GGAGAAACAGAACGAGAGAA+GGG 0.497591 5_2:-9693343 Msa0755860:CDS
ATAGCCTTAACAAGGAGTTT+GGG 0.499292 5_2:-9692101 Msa0755860:intron
AGTATACGATAATAGCTTAA+GGG 0.507427 5_2:+9689076 None:intergenic
ACAGAAATAGGGAAAGTGAC+GGG 0.510497 5_2:-9693386 Msa0755860:intron
CAAAGACCTGTCCTGCCAGC+AGG 0.516037 5_2:+9688979 None:intergenic
AAACAGAACGAGAGAAGGGA+GGG 0.518245 5_2:-9693339 Msa0755860:CDS
GTGCAGCTGGGTATTGTGCT+GGG 0.521168 5_2:-9692458 Msa0755860:intron
GTCAAAATATGGTGGTGAAA+AGG 0.526879 5_2:-9692142 Msa0755860:CDS
GGAGAAAGGGAAAGTGACGG+GGG 0.540858 5_2:-9693364 Msa0755860:CDS
ATCGTATACTGCAGGCAAGA+AGG 0.553817 5_2:-9689063 Msa0755860:CDS
GTGGGTAACCAAGAGGAAGA+AGG 0.555031 5_2:-9693265 Msa0755860:CDS
CTACAGGGTTATGGTTGTGA+CGG 0.558409 5_2:-9689037 Msa0755860:CDS
GAAACAGAACGAGAGAAGGG+AGG 0.558418 5_2:-9693340 Msa0755860:CDS
GAAGAAGGAAAAGAAGCCGA+TGG 0.563967 5_2:-9693310 Msa0755860:CDS
TTGTTCATATAATATCCTAA+AGG 0.569597 5_2:+9692776 None:intergenic
AAGCTATTATCGTATACTGC+AGG 0.573353 5_2:-9689071 Msa0755860:CDS
AGAAAAGAAGAGGAAACAGT+GGG 0.574477 5_2:-9693283 Msa0755860:CDS
CACAAATGGAATAGCCTCAA+GGG 0.574895 5_2:-9690426 Msa0755860:CDS
GCTGGGTATTGTGCTGGGAA+AGG 0.576415 5_2:-9692453 Msa0755860:CDS
CGATGGAGAAAGAAAAGAAG+AGG 0.576550 5_2:-9693293 Msa0755860:CDS
AAATTGGAGAAGAATATTCA+AGG 0.576564 5_2:-9693241 Msa0755860:intron
TGGTGTTGATCTCAAGAAAG+TGG 0.588028 5_2:-9690393 Msa0755860:CDS
AGATGAATCAACTAGAAGAC+AGG 0.588785 5_2:-9692205 Msa0755860:CDS
CCACAAATGGAATAGCCTCA+AGG 0.595503 5_2:-9690427 Msa0755860:CDS
TGGGTAACCAAGAGGAAGAA+GGG 0.601125 5_2:-9693264 Msa0755860:CDS
GGGGACATTACCAAATCCAC+AGG 0.602260 5_2:+9689096 None:intergenic
GTATACGATAATAGCTTAAG+GGG 0.604591 5_2:+9689077 None:intergenic
TACAGAAATAGGGAAAGTGA+CGG 0.610620 5_2:-9693387 Msa0755860:intron
CAAGATAAGCAAGCTTGCAA+AGG 0.611690 5_2:-9691950 Msa0755860:intron
CAGAAATAGGGAAAGTGACG+GGG 0.627024 5_2:-9693385 Msa0755860:CDS
GGCCTTTCTAGAGCGTGTCA+AGG 0.628423 5_2:-9692175 Msa0755860:CDS
CGGGGAGAAAGGGAAAGTGA+CGG 0.630391 5_2:-9693367 Msa0755860:CDS
TCCTCCCAATAGCCTTAACA+AGG 0.645443 5_2:-9692109 Msa0755860:CDS
CAGGCAAGAAGGTTTCTACA+GGG 0.650713 5_2:-9689052 Msa0755860:CDS
TTTATGAGACTTGATTCCTG+TGG 0.650871 5_2:-9689112 Msa0755860:CDS
ACACGCTCTAGAAAGGCCAT+AGG 0.658618 5_2:+9692180 None:intergenic
TCCTTGTTAAGGCTATTGGG+AGG 0.672970 5_2:+9692108 None:intergenic
GGAAACAGTGGGTAACCAAG+AGG 0.685707 5_2:-9693272 Msa0755860:CDS
ACCATATCCATCAACCCTTG+AGG 0.687454 5_2:+9690412 None:intergenic
GTGCTGGGAAAGGCTAAGAG+TGG 0.721903 5_2:-9692443 Msa0755860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATCAAAAATAGTTTT+AGG + chr5_2:9689565-9689584 None:intergenic 10.0%
!!! TTTTATTCTATAAATATTTC+TGG - chr5_2:9693814-9693833 Msa0755860:intron 10.0%
!! ATTGTAAGAAAATAAAAAAA+AGG + chr5_2:9694572-9694591 None:intergenic 10.0%
!!! TATAAAATTGATTACCTTTT+TGG - chr5_2:9692660-9692679 Msa0755860:intron 15.0%
!! AAAATTACTATCTACAATTT+AGG + chr5_2:9693208-9693227 None:intergenic 15.0%
!!! TAATTTTGACCAAAATAATT+TGG - chr5_2:9693221-9693240 Msa0755860:intron 15.0%
!! AGATAAAATTCAAATGAAAT+GGG + chr5_2:9693716-9693735 None:intergenic 15.0%
!! TAGATAAAATTCAAATGAAA+TGG + chr5_2:9693717-9693736 None:intergenic 15.0%
!! ATTTGAATTGATAAATAGTA+GGG + chr5_2:9693778-9693797 None:intergenic 15.0%
!! TATTTGAATTGATAAATAGT+AGG + chr5_2:9693779-9693798 None:intergenic 15.0%
!!! ACTCTATTTATTTTAAGTAT+AGG + chr5_2:9693932-9693951 None:intergenic 15.0%
!! CTATAAAACAAATCAAAAAA+GGG + chr5_2:9694195-9694214 None:intergenic 15.0%
!!! CTTTTTTGATTTGTTTTATA+GGG - chr5_2:9694194-9694213 Msa0755860:intron 15.0%
!! AAATCAAAAACTAAAATTTG+GGG + chr5_2:9694245-9694264 None:intergenic 15.0%
!! CAAATCAAAAACTAAAATTT+GGG + chr5_2:9694246-9694265 None:intergenic 15.0%
!! ACAAATCAAAAACTAAAATT+TGG + chr5_2:9694247-9694266 None:intergenic 15.0%
!!! AGTTTTTGATTTGTTTTATT+CGG - chr5_2:9694253-9694272 Msa0755860:intron 15.0%
!!! AGTTTGATTTTAAAATTAGA+AGG + chr5_2:9694463-9694482 None:intergenic 15.0%
!!! GATTTTGATACATTTTTTTA+TGG - chr5_2:9695126-9695145 Msa0755860:intron 15.0%
!! AATTGATTGATGAATAATAT+CGG + chr5_2:9695233-9695252 None:intergenic 15.0%
!!! AGTTTTTCATATCTTTATTA+GGG + chr5_2:9695256-9695275 None:intergenic 15.0%
!!! AAGTTTTTCATATCTTTATT+AGG + chr5_2:9695257-9695276 None:intergenic 15.0%
!! AGAACATAATTGAGAATATT+AGG - chr5_2:9688965-9688984 Msa0755860:CDS 20.0%
!!! AATTTGAGAAACAGAATTTT+TGG - chr5_2:9689421-9689440 Msa0755860:intron 20.0%
!! GGAATTTAGTATATATATAG+GGG + chr5_2:9690638-9690657 None:intergenic 20.0%
!! GGGAATTTAGTATATATATA+GGG + chr5_2:9690639-9690658 None:intergenic 20.0%
!!! TTGTGATTTTATACAGAAAT+AGG - chr5_2:9691000-9691019 Msa0755860:intron 20.0%
!!! TGTGATTTTATACAGAAATA+GGG - chr5_2:9691001-9691020 Msa0755860:intron 20.0%
!!! TATTTTTGTTTTTGCTTTTG+TGG - chr5_2:9691309-9691328 Msa0755860:intron 20.0%
!!! TTTTTTGTTGATTCTGTTTT+TGG - chr5_2:9691350-9691369 Msa0755860:intron 20.0%
!! TTTGTGAAATTGACTAAAAT+TGG - chr5_2:9691475-9691494 Msa0755860:intron 20.0%
!! TTGTTCATATAATATCCTAA+AGG + chr5_2:9691625-9691644 None:intergenic 20.0%
!! ATTCAATTACCACATATTAA+AGG + chr5_2:9691889-9691908 None:intergenic 20.0%
!! TACCAAATAAACTTGTAAAA+GGG + chr5_2:9691913-9691932 None:intergenic 20.0%
!! TAAGATGATAATTTCCTTTA+TGG + chr5_2:9692019-9692038 None:intergenic 20.0%
!! TTTGATGGGATAAAAATTTA+TGG - chr5_2:9692722-9692741 Msa0755860:intron 20.0%
!! TTGATGGGATAAAAATTTAT+GGG - chr5_2:9692723-9692742 Msa0755860:intron 20.0%
!! GAAAATAAAAAAGAATGAAG+GGG + chr5_2:9693033-9693052 None:intergenic 20.0%
!! GGAAAATAAAAAAGAATGAA+GGG + chr5_2:9693034-9693053 None:intergenic 20.0%
!! AGGAAAATAAAAAAGAATGA+AGG + chr5_2:9693035-9693054 None:intergenic 20.0%
!! AATATATAAATTAGGCTCAA+AGG + chr5_2:9693055-9693074 None:intergenic 20.0%
!! ATATACATTCATTTAACCAT+TGG - chr5_2:9693080-9693099 Msa0755860:intron 20.0%
!! CACTACTTAATTAATCAATA+AGG - chr5_2:9693431-9693450 Msa0755860:intron 20.0%
!!! TATTGATTCTTAGTTAATTG+AGG - chr5_2:9693472-9693491 Msa0755860:intron 20.0%
!!! TTTTATCTTTGTTGTTAGTT+TGG - chr5_2:9693619-9693638 Msa0755860:intron 20.0%
!! CCTATAAAACAAATCAAAAA+AGG + chr5_2:9694196-9694215 None:intergenic 20.0%
!!! CCTTTTTTGATTTGTTTTAT+AGG - chr5_2:9694193-9694212 Msa0755860:intron 20.0%
!!! TTATTTTCTTACAATTTTGC+AGG - chr5_2:9694577-9694596 Msa0755860:intron 20.0%
!! GCAATAGTAAATGTATAAAA+AGG - chr5_2:9695061-9695080 Msa0755860:intron 20.0%
!!! TTGATACATTTTTTTATGGT+TGG - chr5_2:9695130-9695149 Msa0755860:intron 20.0%
!! GATATGAAAAACTTCATAAA+TGG - chr5_2:9695263-9695282 Msa0755860:intron 20.0%
! GCTATTACTATGTTTATCTA+AGG - chr5_2:9689093-9689112 Msa0755860:CDS 25.0%
! TAATAATAATAACAGGAGAC+CGG - chr5_2:9689172-9689191 Msa0755860:intron 25.0%
!! AAACAAGATAATTTTCTTCG+CGG - chr5_2:9689247-9689266 Msa0755860:intron 25.0%
!! ACAATTTAGTAGAGTATCAT+TGG - chr5_2:9689480-9689499 Msa0755860:intron 25.0%
! AAAAAGATAGAACCTGTATA+TGG - chr5_2:9689609-9689628 Msa0755860:intron 25.0%
! TATATGGATGGAATCTTTAA+AGG - chr5_2:9689625-9689644 Msa0755860:intron 25.0%
! GAAACTAAATTGGAATGAAA+AGG - chr5_2:9689910-9689929 Msa0755860:intron 25.0%
! TGAAAAGGACTAATAAAAAC+TGG - chr5_2:9689925-9689944 Msa0755860:intron 25.0%
! TTAAACTGAAGAAATCATAC+TGG - chr5_2:9690110-9690129 Msa0755860:intron 25.0%
!!! ATTTTCGTCATTTGGTAATT+AGG - chr5_2:9690604-9690623 Msa0755860:intron 25.0%
!!! TTTTCGTCATTTGGTAATTA+GGG - chr5_2:9690605-9690624 Msa0755860:intron 25.0%
! GGGGAATTTAGTATATATAT+AGG + chr5_2:9690640-9690659 None:intergenic 25.0%
!!! TTTGTTTTTTTAGAGAGAGA+AGG + chr5_2:9690715-9690734 None:intergenic 25.0%
!! ACTTGTTAGATCATTAGATT+AGG + chr5_2:9690839-9690858 None:intergenic 25.0%
! AAATTGGAGAAGAATATTCA+AGG - chr5_2:9691157-9691176 Msa0755860:intron 25.0%
!! CTTGATGACTTAAAAATTGA+TGG - chr5_2:9691516-9691535 Msa0755860:intron 25.0%
!!! TGAAATTCTATTTTTACTGC+AGG - chr5_2:9691599-9691618 Msa0755860:intron 25.0%
! AGGATATTATATGAACAAGT+TGG - chr5_2:9691627-9691646 Msa0755860:intron 25.0%
!!! TACTGGTTCATATTTTGTAA+TGG + chr5_2:9691670-9691689 None:intergenic 25.0%
!!! TTTTTTCCTAATCATTCTGA+TGG - chr5_2:9691791-9691810 Msa0755860:intron 25.0%
!!! TGATGGAGAATTGTTTTTAA+AGG - chr5_2:9691808-9691827 Msa0755860:intron 25.0%
!! TTCCCTTTTACAAGTTTATT+TGG - chr5_2:9691908-9691927 Msa0755860:intron 25.0%
! GTACCAAATAAACTTGTAAA+AGG + chr5_2:9691914-9691933 None:intergenic 25.0%
! TAATAGGAGATTATCATCTT+AGG - chr5_2:9691990-9692009 Msa0755860:CDS 25.0%
!! AGAAGAAATGTCTAACTTTT+TGG - chr5_2:9692146-9692165 Msa0755860:CDS 25.0%
!! GAAGAAATGTCTAACTTTTT+GGG - chr5_2:9692147-9692166 Msa0755860:CDS 25.0%
!! GATGATTTTGTGTCAAAATA+TGG - chr5_2:9692245-9692264 Msa0755860:intron 25.0%
!!! TAAACTTTTGGAGTTTAATC+TGG - chr5_2:9692336-9692355 Msa0755860:intron 25.0%
!! CTGGTAGACTATTTATATTT+TGG - chr5_2:9692355-9692374 Msa0755860:intron 25.0%
!!! TACCTTTTTGGTTATATCAT+TGG - chr5_2:9692672-9692691 Msa0755860:intron 25.0%
! TGCTTGAATTGTTTATTTGA+TGG - chr5_2:9692707-9692726 Msa0755860:intron 25.0%
! GCTTGAATTGTTTATTTGAT+GGG - chr5_2:9692708-9692727 Msa0755860:intron 25.0%
! TTCGAACATTAAGAAAAGAA+GGG + chr5_2:9693002-9693021 None:intergenic 25.0%
! ATTCGAACATTAAGAAAAGA+AGG + chr5_2:9693003-9693022 None:intergenic 25.0%
! TTGAAAGCTAGTTAGAAAAA+AGG + chr5_2:9693322-9693341 None:intergenic 25.0%
! ATAAGGCAGTAAACAATTAT+TGG - chr5_2:9693448-9693467 Msa0755860:intron 25.0%
! ATTATTTGAATCATTCGCTA+TGG - chr5_2:9693496-9693515 Msa0755860:intron 25.0%
!! CTTATCCTTTTTGATACATT+TGG - chr5_2:9693680-9693699 Msa0755860:intron 25.0%
! AACAACCAAATGTATCAAAA+AGG + chr5_2:9693688-9693707 None:intergenic 25.0%
!! TATTATGACATTTTTGCAAG+AGG + chr5_2:9694114-9694133 None:intergenic 25.0%
!! ACAATTTTGCAGGTTTTTTA+TGG - chr5_2:9694587-9694606 Msa0755860:intron 25.0%
!! TTTTATGGAGAAATTCAGAT+TGG - chr5_2:9694602-9694621 Msa0755860:intron 25.0%
! AATAGCAACTTACAAATATG+AGG + chr5_2:9694864-9694883 None:intergenic 25.0%
! TATCCTTTCATTCAATCATA+TGG - chr5_2:9694986-9695005 Msa0755860:intron 25.0%
! GTGTACAAACTTGATAAAAA+AGG - chr5_2:9695205-9695224 Msa0755860:intron 25.0%
! AGTATACGATAATAGCTTAA+GGG + chr5_2:9695325-9695344 None:intergenic 25.0%
! TATAGAATGAGAGAAGAAAA+TGG - chr5_2:9695385-9695404 Msa0755860:intron 25.0%
AACATAGTAATAGCGAAAAG+CGG + chr5_2:9689087-9689106 None:intergenic 30.0%
! AACAAGATAATTTTCTTCGC+GGG - chr5_2:9689248-9689267 Msa0755860:intron 30.0%
TAAAGATTCCATCCATATAC+AGG + chr5_2:9689624-9689643 None:intergenic 30.0%
!! ATTTGGTCAATTTGTTGTTG+CGG + chr5_2:9689767-9689786 None:intergenic 30.0%
CAACAACAAATTGACCAAAT+TGG - chr5_2:9689767-9689786 Msa0755860:intron 30.0%
TTAAGTATCCTCACACAATA+TGG - chr5_2:9689817-9689836 Msa0755860:intron 30.0%
TACGACAAGAGAAACTAAAT+TGG - chr5_2:9689900-9689919 Msa0755860:intron 30.0%
GACTAATAAAAACTGGAACT+TGG - chr5_2:9689932-9689951 Msa0755860:intron 30.0%
AACTAAATTATGAAGTGCAG+TGG - chr5_2:9689986-9690005 Msa0755860:intron 30.0%
TTAGAGAGAGAAATAAGAAG+AGG - chr5_2:9690290-9690309 Msa0755860:intron 30.0%
ACACAAAGTGGTATAGAAAA+AGG - chr5_2:9690369-9690388 Msa0755860:intron 30.0%
CACAAAGTGGTATAGAAAAA+GGG - chr5_2:9690370-9690389 Msa0755860:intron 30.0%
CACGTTTGAATTTATCAATG+TGG + chr5_2:9690433-9690452 None:intergenic 30.0%
! ACAAAAGCAAATAGTGTTGA+TGG - chr5_2:9690501-9690520 Msa0755860:intron 30.0%
GAAGATCTACTAAACTAGAT+AGG - chr5_2:9690537-9690556 Msa0755860:intron 30.0%
! TTTCGTCATTTGGTAATTAG+GGG - chr5_2:9690606-9690625 Msa0755860:intron 30.0%
ATGTGTGAAATTTGATGGAA+AGG + chr5_2:9690791-9690810 None:intergenic 30.0%
TTTGCATGTGTGAAATTTGA+TGG + chr5_2:9690796-9690815 None:intergenic 30.0%
CAAATTTCACACATGCAAAT+AGG - chr5_2:9690797-9690816 Msa0755860:intron 30.0%
ATCCACTCAATTCTGATTTA+TGG - chr5_2:9690875-9690894 Msa0755860:intron 30.0%
!!! TATGGTGAGTTTTGTTTGAT+TGG - chr5_2:9690893-9690912 Msa0755860:intron 30.0%
!!! ATGGTGAGTTTTGTTTGATT+GGG - chr5_2:9690894-9690913 Msa0755860:intron 30.0%
! GTGATTTCTTGCTATATTGT+GGG - chr5_2:9691179-9691198 Msa0755860:intron 30.0%
ATATTGTGGGAATGCATAAT+TGG - chr5_2:9691192-9691211 Msa0755860:intron 30.0%
TGGCTTATGATGAATATTCA+AGG - chr5_2:9691212-9691231 Msa0755860:intron 30.0%
!!! TTGTTTTTGCTTTTGTGGTT+TGG - chr5_2:9691314-9691333 Msa0755860:intron 30.0%
!!! TTTTGAGATGAAATCACACT+TGG - chr5_2:9691432-9691451 Msa0755860:intron 30.0%
CTTGGTATAAATTGCACATA+AGG - chr5_2:9691450-9691469 Msa0755860:intron 30.0%
TGATATATGAATCTGTTCAG+TGG - chr5_2:9691556-9691575 Msa0755860:intron 30.0%
!! TTATATGAACAAGTTGGTCT+TGG - chr5_2:9691633-9691652 Msa0755860:intron 30.0%
CTATTCCATCTTTCTAAGTA+TGG + chr5_2:9691703-9691722 None:intergenic 30.0%
AATTCTCCATCAGAATGATT+AGG + chr5_2:9691800-9691819 None:intergenic 30.0%
CACAATGTTCCTTTAATATG+TGG - chr5_2:9691877-9691896 Msa0755860:intron 30.0%
ATAATCTCCTATTAGTACTC+TGG + chr5_2:9691984-9692003 None:intergenic 30.0%
ATCATCTTAGGTAACCATAA+AGG - chr5_2:9692002-9692021 Msa0755860:intron 30.0%
! GATTTTGTGTCAAAATATGG+TGG - chr5_2:9692248-9692267 Msa0755860:intron 30.0%
!! AACTTTCTGCTCTAAACTTT+TGG - chr5_2:9692324-9692343 Msa0755860:intron 30.0%
! CATGATGGAGAATATTGAAA+AGG - chr5_2:9692503-9692522 Msa0755860:intron 30.0%
TCAAGTCAATGTTATCATAG+AGG - chr5_2:9692547-9692566 Msa0755860:intron 30.0%
TCATTGATGAGAATTGATAG+AGG - chr5_2:9692573-9692592 Msa0755860:intron 30.0%
CACCAATGATATAACCAAAA+AGG + chr5_2:9692677-9692696 None:intergenic 30.0%
AGAGAAAATGTAGAGAAAGA+AGG + chr5_2:9692829-9692848 None:intergenic 30.0%
TCGAACATTAAGAAAAGAAG+GGG + chr5_2:9693001-9693020 None:intergenic 30.0%
CCAAAATTCAGAAATTCCAA+TGG + chr5_2:9693099-9693118 None:intergenic 30.0%
! CCATTGGAATTTCTGAATTT+TGG - chr5_2:9693096-9693115 Msa0755860:intron 30.0%
TTCTATTAATTGCCTCACTA+TGG - chr5_2:9693296-9693315 Msa0755860:CDS 30.0%
TTAACTACAGTAGAGATTCT+TGG - chr5_2:9693357-9693376 Msa0755860:CDS 30.0%
AAATCATTAGAGAAATGCCA+AGG + chr5_2:9693525-9693544 None:intergenic 30.0%
!! CTTTGTTGTTAGTTTGGATT+TGG - chr5_2:9693625-9693644 Msa0755860:intron 30.0%
! ATAGAGTTTTTCCTTAATGC+AGG - chr5_2:9693945-9693964 Msa0755860:intron 30.0%
!! TGAATGAGACTGATTTTCTT+AGG - chr5_2:9694148-9694167 Msa0755860:intron 30.0%
!! GAATGAGACTGATTTTCTTA+GGG - chr5_2:9694149-9694168 Msa0755860:intron 30.0%
GTTAGCATTGTTATCACAAT+TGG + chr5_2:9694371-9694390 None:intergenic 30.0%
! ATGCTAACATCATTTTCCAT+TGG - chr5_2:9694383-9694402 Msa0755860:intron 30.0%
TAGTAAAATGTCCTCTTTCT+AGG - chr5_2:9694406-9694425 Msa0755860:intron 30.0%
AATTCAGATTGGTACTCATT+TGG - chr5_2:9694613-9694632 Msa0755860:intron 30.0%
ATTCAGATTGGTACTCATTT+GGG - chr5_2:9694614-9694633 Msa0755860:intron 30.0%
ACATTCAACACATACAAATC+AGG + chr5_2:9694722-9694741 None:intergenic 30.0%
! TGTTGAATGTTGTTTAAGAG+AGG - chr5_2:9694732-9694751 Msa0755860:intron 30.0%
ACACCATATGATTGAATGAA+AGG + chr5_2:9694992-9695011 None:intergenic 30.0%
! ACTGTAAATACACTTTTGCT+AGG + chr5_2:9695020-9695039 None:intergenic 30.0%
TTGCAATTAAATTGCTGCAT+GGG - chr5_2:9695084-9695103 Msa0755860:intron 30.0%
GTATACGATAATAGCTTAAG+GGG + chr5_2:9695324-9695343 None:intergenic 30.0%
CAGTATACGATAATAGCTTA+AGG + chr5_2:9695326-9695345 None:intergenic 30.0%
TTTCAATCCTGAAGAATGAC+AGG - chr5_2:9688990-9689009 Msa0755860:CDS 35.0%
TTCAATCCTGAAGAATGACA+GGG - chr5_2:9688991-9689010 Msa0755860:CDS 35.0%
! AAAAGCGGTACTTGTTAGAT+TGG + chr5_2:9689072-9689091 None:intergenic 35.0%
TGAGTAGTTTACTTTGAGTC+CGG + chr5_2:9689524-9689543 None:intergenic 35.0%
AGATAGAACCTGTATATGGA+TGG - chr5_2:9689613-9689632 Msa0755860:intron 35.0%
CTGCTACTGTTTGTGTATTA+AGG + chr5_2:9689685-9689704 None:intergenic 35.0%
AGCATGGAATATGAATGGAA+AGG - chr5_2:9689706-9689725 Msa0755860:intron 35.0%
GCTGCTGTTATATTCCAATT+TGG + chr5_2:9689784-9689803 None:intergenic 35.0%
AATATGGAGTTATGGACTCA+CGG - chr5_2:9689833-9689852 Msa0755860:intron 35.0%
!! AATCATACTGGTTTGTGAAG+AGG - chr5_2:9690122-9690141 Msa0755860:intron 35.0%
!! ATCATACTGGTTTGTGAAGA+GGG - chr5_2:9690123-9690142 Msa0755860:intron 35.0%
GAGAAATAAGAAGAGGACAA+TGG - chr5_2:9690297-9690316 Msa0755860:intron 35.0%
TAAAATATCCCTGCCACATA+AGG - chr5_2:9690341-9690360 Msa0755860:intron 35.0%
AAAATATCCCTGCCACATAA+GGG - chr5_2:9690342-9690361 Msa0755860:intron 35.0%
!! AATAGTGTTGATGGACTCAA+TGG - chr5_2:9690510-9690529 Msa0755860:intron 35.0%
GGGCAAAATTGGAATTTCAA+CGG + chr5_2:9690574-9690593 None:intergenic 35.0%
TGGAGAAATGAGAAAAAGAG+GGG + chr5_2:9690659-9690678 None:intergenic 35.0%
GTGGAGAAATGAGAAAAAGA+GGG + chr5_2:9690660-9690679 None:intergenic 35.0%
CACCATAAATCAGAATTGAG+TGG + chr5_2:9690880-9690899 None:intergenic 35.0%
TACAGAAATAGGGAAAGTGA+CGG - chr5_2:9691011-9691030 Msa0755860:intron 35.0%
! CTCTTCTTTTCTTTCTCCAT+CGG + chr5_2:9691107-9691126 None:intergenic 35.0%
AAGAAAAGAAGAGGAAACAG+TGG - chr5_2:9691114-9691133 Msa0755860:intron 35.0%
AGAAAAGAAGAGGAAACAGT+GGG - chr5_2:9691115-9691134 Msa0755860:intron 35.0%
! GGTGATTTCTTGCTATATTG+TGG - chr5_2:9691178-9691197 Msa0755860:intron 35.0%
!! TATTTTTACTGCAGGCCTTT+AGG - chr5_2:9691607-9691626 Msa0755860:intron 35.0%
TCCTACCATACTTAGAAAGA+TGG - chr5_2:9691695-9691714 Msa0755860:intron 35.0%
TCCATCTTTCTAAGTATGGT+AGG + chr5_2:9691699-9691718 None:intergenic 35.0%
! TCCAGCATTTATGTTTTCAG+AGG - chr5_2:9692047-9692066 Msa0755860:intron 35.0%
! ACCTCTGAAAACATAAATGC+TGG + chr5_2:9692051-9692070 None:intergenic 35.0%
AGATGAATCAACTAGAAGAC+AGG - chr5_2:9692193-9692212 Msa0755860:CDS 35.0%
! GTCAAAATATGGTGGTGAAA+AGG - chr5_2:9692256-9692275 Msa0755860:intron 35.0%
AACTCCTTGTTAAGGCTATT+GGG + chr5_2:9692296-9692315 None:intergenic 35.0%
AAACTCCTTGTTAAGGCTAT+TGG + chr5_2:9692297-9692316 None:intergenic 35.0%
! AATAGCCTTAACAAGGAGTT+TGG - chr5_2:9692296-9692315 Msa0755860:intron 35.0%
! ATAGCCTTAACAAGGAGTTT+GGG - chr5_2:9692297-9692316 Msa0755860:intron 35.0%
TGCATATGTTCCTTCAACTT+TGG + chr5_2:9692407-9692426 None:intergenic 35.0%
!! TGAAGTTAAAGGTGTCATGA+TGG - chr5_2:9692488-9692507 Msa0755860:intron 35.0%
TGCTAATTCTCTAACACAGA+TGG - chr5_2:9692615-9692634 Msa0755860:intron 35.0%
!!! CTCTAACACAGATGGTTTTT+TGG - chr5_2:9692623-9692642 Msa0755860:intron 35.0%
ATGTAGAGAAAGAAGGAAGA+GGG + chr5_2:9692822-9692841 None:intergenic 35.0%
AATGTAGAGAAAGAAGGAAG+AGG + chr5_2:9692823-9692842 None:intergenic 35.0%
!! TTCTGAATTTTGGCCTGATA+CGG - chr5_2:9693106-9693125 Msa0755860:intron 35.0%
! TCAGGCACACCAAATTATTT+TGG + chr5_2:9693233-9693252 None:intergenic 35.0%
! CGTAGTCAAGATAACTTTTC+AGG + chr5_2:9693251-9693270 None:intergenic 35.0%
TTAGAAAAAAGGCCATAGTG+AGG + chr5_2:9693311-9693330 None:intergenic 35.0%
TTTGGATTTGGCCATAGATT+CGG - chr5_2:9693637-9693656 Msa0755860:intron 35.0%
ATTAAACTCCTCCGAATCTA+TGG + chr5_2:9693651-9693670 None:intergenic 35.0%
ATTTGTGGTAACCTGCATTA+AGG + chr5_2:9693959-9693978 None:intergenic 35.0%
TTAATGCAGGTTACCACAAA+TGG - chr5_2:9693958-9693977 Msa0755860:intron 35.0%
GTGGTAGAAAAAGTAGAACA+TGG - chr5_2:9694024-9694043 Msa0755860:intron 35.0%
! AGTAGAACATGGTTTGTAAC+TGG - chr5_2:9694035-9694054 Msa0755860:intron 35.0%
ACAAATACTCAAGAAGCCAT+TGG + chr5_2:9694089-9694108 None:intergenic 35.0%
! ACTAAAATTTGGGGTTCAAC+TGG + chr5_2:9694236-9694255 None:intergenic 35.0%
! AGAGGACATTTTACTACCAA+TGG + chr5_2:9694402-9694421 None:intergenic 35.0%
TAACAAACTCTCCTAGAAAG+AGG + chr5_2:9694420-9694439 None:intergenic 35.0%
ACAGACTTATCACAATTGAG+AGG + chr5_2:9694514-9694533 None:intergenic 35.0%
!!! ATTTGGGAAGTTGTTTTTGC+AGG - chr5_2:9694630-9694649 Msa0755860:intron 35.0%
CATACAAATCAGGACATATG+AGG + chr5_2:9694712-9694731 None:intergenic 35.0%
TGCTTCCAATTCACATGAAT+AGG - chr5_2:9694761-9694780 Msa0755860:intron 35.0%
GCTTCCAATTCACATGAATA+GGG - chr5_2:9694762-9694781 Msa0755860:intron 35.0%
CTTCCAATTCACATGAATAG+GGG - chr5_2:9694763-9694782 Msa0755860:intron 35.0%
TAGTTACATGCCTCTGAATT+TGG - chr5_2:9694910-9694929 Msa0755860:intron 35.0%
GTTGCAATTAAATTGCTGCA+TGG - chr5_2:9695083-9695102 Msa0755860:intron 35.0%
TTTATGAGACTTGATTCCTG+TGG - chr5_2:9695286-9695305 Msa0755860:intron 35.0%
AAGCTATTATCGTATACTGC+AGG - chr5_2:9695327-9695346 Msa0755860:intron 35.0%
!!! CTTTGTTTTCAACAACAGTG+TGG - chr5_2:9695437-9695456 Msa0755860:intron 35.0%
!! ACTTGTTAGATTGGTCTCTG+TGG + chr5_2:9689063-9689082 None:intergenic 40.0%
!! TACTACTTTGTGAGCATCGA+TGG + chr5_2:9689215-9689234 None:intergenic 40.0%
CAATTACAGGTTCGACTTTC+TGG + chr5_2:9689318-9689337 None:intergenic 40.0%
! GCAGAAGCATGGAATATGAA+TGG - chr5_2:9689701-9689720 Msa0755860:intron 40.0%
AGCAAGCAACACAATGGAAT+GGG - chr5_2:9689741-9689760 Msa0755860:intron 40.0%
TTGGAATATAACAGCAGCGA+TGG - chr5_2:9689786-9689805 Msa0755860:CDS 40.0%
CCATAACTCCATATTGTGTG+AGG + chr5_2:9689828-9689847 None:intergenic 40.0%
CCTCACACAATATGGAGTTA+TGG - chr5_2:9689825-9689844 Msa0755860:intron 40.0%
CTCACGGTATGAATTAAAGC+AGG - chr5_2:9689849-9689868 Msa0755860:intron 40.0%
! GGTTTGGATCTCGTTTTCTT+CGG - chr5_2:9690173-9690192 Msa0755860:intron 40.0%
!!! TTTTCTTCGGCTTTAGAGTG+TGG - chr5_2:9690186-9690205 Msa0755860:intron 40.0%
! CTCGTTTTCTTCTTTGCAGA+TGG - chr5_2:9690237-9690256 Msa0755860:intron 40.0%
! GTTTTCTTCTTTGCAGATGG+TGG - chr5_2:9690240-9690259 Msa0755860:intron 40.0%
TGGTGAGAAAGATCTGTTGT+GGG - chr5_2:9690260-9690279 Msa0755860:intron 40.0%
AGAAAGATCTGTTGTGGGTT+TGG - chr5_2:9690265-9690284 Msa0755860:intron 40.0%
GAAAGATCTGTTGTGGGTTT+GGG - chr5_2:9690266-9690285 Msa0755860:intron 40.0%
GAGGACAATGGAAGAGAAAA+TGG - chr5_2:9690309-9690328 Msa0755860:intron 40.0%
AAATATCCCTGCCACATAAG+GGG - chr5_2:9690343-9690362 Msa0755860:intron 40.0%
TGGCAGTGCGTATAAATGAA+AGG + chr5_2:9690413-9690432 None:intergenic 40.0%
! AATTCCAATTTTGCCCTCAG+AGG - chr5_2:9690578-9690597 Msa0755860:intron 40.0%
! ATTCCAATTTTGCCCTCAGA+GGG - chr5_2:9690579-9690598 Msa0755860:intron 40.0%
!!! AGAGGGGTATTTTCGTCATT+TGG - chr5_2:9690596-9690615 Msa0755860:intron 40.0%
GGTGGAGAAATGAGAAAAAG+AGG + chr5_2:9690661-9690680 None:intergenic 40.0%
GTCTTGTAGTGAGAGAATGT+GGG + chr5_2:9690682-9690701 None:intergenic 40.0%
TGTCTTGTAGTGAGAGAATG+TGG + chr5_2:9690683-9690702 None:intergenic 40.0%
TCCTTCTCTCTTCTCAAACA+CGG - chr5_2:9690747-9690766 Msa0755860:intron 40.0%
GATGGAAAGGAGATAAGAGA+GGG + chr5_2:9690778-9690797 None:intergenic 40.0%
TGATGGAAAGGAGATAAGAG+AGG + chr5_2:9690779-9690798 None:intergenic 40.0%
ACAGAAATAGGGAAAGTGAC+GGG - chr5_2:9691012-9691031 Msa0755860:intron 40.0%
CGATGGAGAAAGAAAAGAAG+AGG - chr5_2:9691105-9691124 Msa0755860:intron 40.0%
! CATTCAATCTGAGACATGCA+TGG + chr5_2:9691268-9691287 None:intergenic 40.0%
!!! CTTTTGTGGTTTGGTGATTC+TGG - chr5_2:9691323-9691342 Msa0755860:intron 40.0%
!! ATGAACAAGTTGGTCTTGGT+TGG - chr5_2:9691637-9691656 Msa0755860:intron 40.0%
!! TGAACAAGTTGGTCTTGGTT+GGG - chr5_2:9691638-9691657 Msa0755860:intron 40.0%
AGTATGGTAGGATGACTTAC+TGG + chr5_2:9691687-9691706 None:intergenic 40.0%
AACTAGAAGACAGGTTCCTA+TGG - chr5_2:9692202-9692221 Msa0755860:CDS 40.0%
AGTACCCAAACTCCTTGTTA+AGG + chr5_2:9692304-9692323 None:intergenic 40.0%
CAAGATAAGCAAGCTTGCAA+AGG - chr5_2:9692448-9692467 Msa0755860:CDS 40.0%
!! GCTCAGGTTTCTGAAGTTAA+AGG - chr5_2:9692477-9692496 Msa0755860:intron 40.0%
TGTAGAGAAAGAAGGAAGAG+GGG + chr5_2:9692821-9692840 None:intergenic 40.0%
CTCTTAATCACTACCTGTAG+TGG + chr5_2:9692895-9692914 None:intergenic 40.0%
GACTGGATTTGTCTCAAGTA+TGG - chr5_2:9693137-9693156 Msa0755860:intron 40.0%
ATCATTCGCTATGGTTTCCT+TGG - chr5_2:9693505-9693524 Msa0755860:intron 40.0%
TGTGATACCATGCTGAAGTA+GGG + chr5_2:9693846-9693865 None:intergenic 40.0%
ATGTGATACCATGCTGAAGT+AGG + chr5_2:9693847-9693866 None:intergenic 40.0%
CACAAATGGAATAGCCTCAA+GGG - chr5_2:9693972-9693991 Msa0755860:intron 40.0%
!! TGGTGTTGATCTCAAGAAAG+TGG - chr5_2:9694005-9694024 Msa0755860:intron 40.0%
ATAGACAAAGCAGTATACCC+AGG + chr5_2:9694061-9694080 None:intergenic 40.0%
GCTTTGTCTATTGCAACCAA+TGG - chr5_2:9694070-9694089 Msa0755860:intron 40.0%
CATCCCCTATTCATGTGAAT+TGG + chr5_2:9694769-9694788 None:intergenic 40.0%
CAATTCACATGAATAGGGGA+TGG - chr5_2:9694767-9694786 Msa0755860:intron 40.0%
GATGTGTGAACCAAATTCAG+AGG + chr5_2:9694923-9694942 None:intergenic 40.0%
! ATTGCTGCATGGGTTATGAT+AGG - chr5_2:9695094-9695113 Msa0755860:intron 40.0%
AGACTTGATTCCTGTGGATT+TGG - chr5_2:9695292-9695311 Msa0755860:intron 40.0%
AGAAGGTTTCTACAGGGTTA+TGG - chr5_2:9695352-9695371 Msa0755860:intron 40.0%
!!! ATGGTTTTGTAGTAACCTGC+TGG - chr5_2:9695404-9695423 Msa0755860:intron 40.0%
TAATTCGTACCACGCGAAAG+CGG + chr5_2:9689342-9689361 None:intergenic 45.0%
TACTTTGAGTCCGGAATGTG+AGG + chr5_2:9689515-9689534 None:intergenic 45.0%
GCAATTGTGTTGCAGTTACG+TGG + chr5_2:9689661-9689680 None:intergenic 45.0%
CACAAACAGTAGCAGAAGCA+TGG - chr5_2:9689690-9689709 Msa0755860:intron 45.0%
CAGCAAGCAACACAATGGAA+TGG - chr5_2:9689740-9689759 Msa0755860:intron 45.0%
CGGTATGAATTAAAGCAGGC+AGG - chr5_2:9689853-9689872 Msa0755860:intron 45.0%
GCAGTGGCTAAAACGAAAAC+TGG - chr5_2:9690002-9690021 Msa0755860:intron 45.0%
! TGATGGATATGTGCGTTGAG+AGG - chr5_2:9690152-9690171 Msa0755860:intron 45.0%
GATATGTGCGTTGAGAGGTT+TGG - chr5_2:9690157-9690176 Msa0755860:intron 45.0%
GTGGTGAGAAAGATCTGTTG+TGG - chr5_2:9690259-9690278 Msa0755860:intron 45.0%
CTTTGTGTACACCCCTTATG+TGG + chr5_2:9690357-9690376 None:intergenic 45.0%
! CATAAGGGGTGTACACAAAG+TGG - chr5_2:9690357-9690376 Msa0755860:intron 45.0%
! TTCCAATTTTGCCCTCAGAG+GGG - chr5_2:9690580-9690599 Msa0755860:intron 45.0%
TGACGAAAATACCCCTCTGA+GGG + chr5_2:9690594-9690613 None:intergenic 45.0%
ATGACGAAAATACCCCTCTG+AGG + chr5_2:9690595-9690614 None:intergenic 45.0%
TTGTAGTGAGAGAATGTGGG+TGG + chr5_2:9690679-9690698 None:intergenic 45.0%
AAAGGAGATAAGAGAGGGTG+AGG + chr5_2:9690773-9690792 None:intergenic 45.0%
CAGAAATAGGGAAAGTGACG+GGG - chr5_2:9691013-9691032 Msa0755860:intron 45.0%
GGAGAAACAGAACGAGAGAA+GGG - chr5_2:9691055-9691074 Msa0755860:intron 45.0%
AAACAGAACGAGAGAAGGGA+GGG - chr5_2:9691059-9691078 Msa0755860:intron 45.0%
GAAGAAGGAAAAGAAGCCGA+TGG - chr5_2:9691088-9691107 Msa0755860:intron 45.0%
TGGGTAACCAAGAGGAAGAA+GGG - chr5_2:9691134-9691153 Msa0755860:intron 45.0%
CCAATTTCCCTTCTTCCTCT+TGG + chr5_2:9691144-9691163 None:intergenic 45.0%
CCAAGAGGAAGAAGGGAAAT+TGG - chr5_2:9691141-9691160 Msa0755860:intron 45.0%
! GTGGTGACCAGAGTACTAAT+AGG - chr5_2:9691974-9691993 Msa0755860:CDS 45.0%
!! GATGTGCTGCTTTAGTTCAC+TGG - chr5_2:9692115-9692134 Msa0755860:CDS 45.0%
!! ATCCTTGACACGCTCTAGAA+AGG + chr5_2:9692228-9692247 None:intergenic 45.0%
! TCCTCCCAATAGCCTTAACA+AGG - chr5_2:9692289-9692308 Msa0755860:intron 45.0%
TCCTTGTTAAGGCTATTGGG+AGG + chr5_2:9692293-9692312 None:intergenic 45.0%
CTTGCAAAGGTGAAAAGCTC+AGG - chr5_2:9692461-9692480 Msa0755860:intron 45.0%
AGAGGGGATTAGAAGAGATG+AGG + chr5_2:9692805-9692824 None:intergenic 45.0%
GATGAGCTTAGTTCCACTAC+AGG - chr5_2:9692879-9692898 Msa0755860:intron 45.0%
ACAAGCACAACAGTAGAGGT+TGG - chr5_2:9692916-9692935 Msa0755860:intron 45.0%
CCTTGAGGCTATTCCATTTG+TGG + chr5_2:9693974-9693993 None:intergenic 45.0%
CCACAAATGGAATAGCCTCA+AGG - chr5_2:9693971-9693990 Msa0755860:intron 45.0%
ACCATATCCATCAACCCTTG+AGG + chr5_2:9693989-9694008 None:intergenic 45.0%
! AACATGGTTTGTAACTGGCC+TGG - chr5_2:9694040-9694059 Msa0755860:intron 45.0%
! ACATGGTTTGTAACTGGCCT+GGG - chr5_2:9694041-9694060 Msa0755860:intron 45.0%
GAGGCTGCACAATATCTTAG+AGG + chr5_2:9694495-9694514 None:intergenic 45.0%
TCACATGAATAGGGGATGGA+AGG - chr5_2:9694771-9694790 Msa0755860:intron 45.0%
ACTGCTGCATCTTATGCAAG+AGG - chr5_2:9694816-9694835 Msa0755860:intron 45.0%
ATCGTATACTGCAGGCAAGA+AGG - chr5_2:9695335-9695354 Msa0755860:intron 45.0%
CAGGCAAGAAGGTTTCTACA+GGG - chr5_2:9695346-9695365 Msa0755860:intron 45.0%
CTACAGGGTTATGGTTGTGA+CGG - chr5_2:9695361-9695380 Msa0755860:intron 45.0%
! TTTTGTAGTAACCTGCTGGC+AGG - chr5_2:9695408-9695427 Msa0755860:intron 45.0%
!!! TTTAATTTAATAATAATAAC+AGG - chr5_2:9689165-9689184 Msa0755860:intron 5.0%
!!! ATTAATTATTTTTCAAAAAA+AGG + chr5_2:9689377-9689396 None:intergenic 5.0%
!! TATAAAACAATATATAAATT+AGG + chr5_2:9693063-9693082 None:intergenic 5.0%
CCGACATAGTCGTGCATTTG+CGG + chr5_2:9689017-9689036 None:intergenic 50.0%
CCGCAAATGCACGACTATGT+CGG - chr5_2:9689014-9689033 Msa0755860:CDS 50.0%
GGTCGACGAGAACTACATTC+CGG + chr5_2:9689194-9689213 None:intergenic 50.0%
AATTCGTACCACGCGAAAGC+GGG + chr5_2:9689341-9689360 None:intergenic 50.0%
GTGTGACGATCCTCACATTC+CGG - chr5_2:9689502-9689521 Msa0755860:intron 50.0%
TAGCGCAGCAAGCAACACAA+TGG - chr5_2:9689735-9689754 Msa0755860:intron 50.0%
TGTGAAGAGGGAGAAGCTGA+TGG - chr5_2:9690135-9690154 Msa0755860:intron 50.0%
!! TCTTCGGCTTTAGAGTGTGG+CGG - chr5_2:9690189-9690208 Msa0755860:intron 50.0%
TGTACACCCCTTATGTGGCA+GGG + chr5_2:9690352-9690371 None:intergenic 50.0%
! TACCCCTCTGAGGGCAAAAT+TGG + chr5_2:9690585-9690604 None:intergenic 50.0%
GCCGTGTTTGAGAAGAGAGA+AGG + chr5_2:9690751-9690770 None:intergenic 50.0%
GGGAGAAACAGAACGAGAGA+AGG - chr5_2:9691054-9691073 Msa0755860:intron 50.0%
GAAACAGAACGAGAGAAGGG+AGG - chr5_2:9691058-9691077 Msa0755860:intron 50.0%
GGAAACAGTGGGTAACCAAG+AGG - chr5_2:9691126-9691145 Msa0755860:intron 50.0%
GTGGGTAACCAAGAGGAAGA+AGG - chr5_2:9691133-9691152 Msa0755860:intron 50.0%
TTGGTACTGTTCTGTGCAGC+TGG - chr5_2:9691927-9691946 Msa0755860:intron 50.0%
TGGTACTGTTCTGTGCAGCT+GGG - chr5_2:9691928-9691947 Msa0755860:intron 50.0%
!! GTGCTGCTTTAGTTCACTGG+CGG - chr5_2:9692118-9692137 Msa0755860:CDS 50.0%
!! ACACGCTCTAGAAAGGCCAT+AGG + chr5_2:9692221-9692240 None:intergenic 50.0%
TCTGCACAGGCCAAAGTTGA+AGG - chr5_2:9692394-9692413 Msa0755860:intron 50.0%
GAGCACAAGCACAACAGTAG+AGG - chr5_2:9692912-9692931 Msa0755860:intron 50.0%
TTGGCCTGATACGGCTGATA+CGG - chr5_2:9693115-9693134 Msa0755860:intron 50.0%
GGATTTGGCCATAGATTCGG+AGG - chr5_2:9693640-9693659 Msa0755860:intron 50.0%
GATGCTTCCCTACTTCAGCA+TGG - chr5_2:9693836-9693855 Msa0755860:intron 50.0%
GGAATAGCCTCAAGGGTTGA+TGG - chr5_2:9693979-9693998 Msa0755860:intron 50.0%
!! GCCTCAAGGGTTGATGGATA+TGG - chr5_2:9693985-9694004 Msa0755860:intron 50.0%
!! GCAAGAGGTACTAGCAGCAA+TGG - chr5_2:9694831-9694850 Msa0755860:intron 50.0%
GGGGACATTACCAAATCCAC+AGG + chr5_2:9695305-9695324 None:intergenic 50.0%
GCAGGCAAGAAGGTTTCTAC+AGG - chr5_2:9695345-9695364 Msa0755860:intron 50.0%
CAACAACAGTGTGGAGAGCT+AGG - chr5_2:9695446-9695465 Msa0755860:intron 50.0%
TTGCGGCCCTGTCATTCTTC+AGG + chr5_2:9689000-9689019 None:intergenic 55.0%
ACCGCATGCGCTAGAGTAAG+CGG + chr5_2:9689294-9689313 None:intergenic 55.0%
ACGCGAAAGCGGGCAATTAC+AGG + chr5_2:9689331-9689350 None:intergenic 55.0%
TGTAATTGCCCGCTTTCGCG+TGG - chr5_2:9689330-9689349 Msa0755860:intron 55.0%
! CGATGGTGGTGAGAGAGGTT+TGG - chr5_2:9690212-9690231 Msa0755860:intron 55.0%
GTGTACACCCCTTATGTGGC+AGG + chr5_2:9690353-9690372 None:intergenic 55.0%
! AGGGAAAGTGACGGGGAGAA+AGG - chr5_2:9691020-9691039 Msa0755860:intron 55.0%
! GGGAAAGTGACGGGGAGAAA+GGG - chr5_2:9691021-9691040 Msa0755860:intron 55.0%
CGGGGAGAAAGGGAAAGTGA+CGG - chr5_2:9691031-9691050 Msa0755860:intron 55.0%
GGGGAGAAAGGGAAAGTGAC+GGG - chr5_2:9691032-9691051 Msa0755860:intron 55.0%
GGGAGAAAGGGAAAGTGACG+GGG - chr5_2:9691033-9691052 Msa0755860:intron 55.0%
GGAGAAAGGGAAAGTGACGG+GGG - chr5_2:9691034-9691053 Msa0755860:intron 55.0%
AAGGGAGGGAGAGGAGAAGA+AGG - chr5_2:9691073-9691092 Msa0755860:intron 55.0%
! TGTGCAGCTGGGTATTGTGC+TGG - chr5_2:9691939-9691958 Msa0755860:intron 55.0%
! GTGCAGCTGGGTATTGTGCT+GGG - chr5_2:9691940-9691959 Msa0755860:intron 55.0%
! GCTGGGTATTGTGCTGGGAA+AGG - chr5_2:9691945-9691964 Msa0755860:intron 55.0%
GTGCTGGGAAAGGCTAAGAG+TGG - chr5_2:9691955-9691974 Msa0755860:CDS 55.0%
!! GGCCTTTCTAGAGCGTGTCA+AGG - chr5_2:9692223-9692242 Msa0755860:CDS 55.0%
ATGTGCCAACCTCTCTGCAC+AGG - chr5_2:9692381-9692400 Msa0755860:intron 55.0%
TTTGGCCTGTGCAGAGAGGT+TGG + chr5_2:9692389-9692408 None:intergenic 55.0%
CAACTTTGGCCTGTGCAGAG+AGG + chr5_2:9692393-9692412 None:intergenic 55.0%
CAGTCCGTATCAGCCGTATC+AGG + chr5_2:9693122-9693141 None:intergenic 55.0%
CTGATACGGCTGATACGGAC+TGG - chr5_2:9693120-9693139 Msa0755860:intron 55.0%
TAGTAACCTGCTGGCAGGAC+AGG - chr5_2:9695413-9695432 Msa0755860:intron 55.0%
GCCGCTTACTCTAGCGCATG+CGG - chr5_2:9689290-9689309 Msa0755860:intron 60.0%
AGCAGGCAGGTGCAGCAACA+CGG - chr5_2:9689866-9689885 Msa0755860:intron 60.0%
!! GCTTTAGAGTGTGGCGGCGA+TGG - chr5_2:9690195-9690214 Msa0755860:intron 60.0%
TTAGAGTGTGGCGGCGATGG+TGG - chr5_2:9690198-9690217 Msa0755860:intron 60.0%
GAACGAGAGAAGGGAGGGAG+AGG - chr5_2:9691064-9691083 Msa0755860:intron 60.0%
CAAAGACCTGTCCTGCCAGC+AGG + chr5_2:9695422-9695441 None:intergenic 60.0%
! GGCGGCGATGGTGGTGAGAG+AGG - chr5_2:9690207-9690226 Msa0755860:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9688946 9695474 9688946 ID=Msa0755860;Name=Msa0755860
chr5_2 mRNA 9688946 9695474 9688946 ID=Msa0755860-mRNA-1;Parent=Msa0755860;Name=Msa0755860-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.44|0.75|0.77|9|0|271
chr5_2 exon 9695470 9695474 9695470 ID=Msa0755860-mRNA-1:exon:4540;Parent=Msa0755860-mRNA-1
chr5_2 exon 9693242 9693404 9693242 ID=Msa0755860-mRNA-1:exon:4539;Parent=Msa0755860-mRNA-1
chr5_2 exon 9692734 9692799 9692734 ID=Msa0755860-mRNA-1:exon:4538;Parent=Msa0755860-mRNA-1
chr5_2 exon 9692435 9692474 9692435 ID=Msa0755860-mRNA-1:exon:4537;Parent=Msa0755860-mRNA-1
chr5_2 exon 9692102 9692243 9692102 ID=Msa0755860-mRNA-1:exon:4536;Parent=Msa0755860-mRNA-1
chr5_2 exon 9691951 9692017 9691951 ID=Msa0755860-mRNA-1:exon:4535;Parent=Msa0755860-mRNA-1
chr5_2 exon 9690375 9690453 9690375 ID=Msa0755860-mRNA-1:exon:4534;Parent=Msa0755860-mRNA-1
chr5_2 exon 9689779 9689821 9689779 ID=Msa0755860-mRNA-1:exon:4533;Parent=Msa0755860-mRNA-1
chr5_2 exon 9688946 9689156 9688946 ID=Msa0755860-mRNA-1:exon:4532;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9695470 9695474 9695470 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9693242 9693404 9693242 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9692734 9692799 9692734 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9692435 9692474 9692435 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9692102 9692243 9692102 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9691951 9692017 9691951 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9690375 9690453 9690375 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9689779 9689821 9689779 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
chr5_2 CDS 9688946 9689156 9688946 ID=Msa0755860-mRNA-1:cds;Parent=Msa0755860-mRNA-1
Gene Sequence

>Msa0755860

ATGAGAAATAGGGAAAGTGACGGGGAGAAAGGGAAAGTGACGGGGGAGAAACAGAACGAGAGAAGGGAGGGAGAGGAGAAGAAGGAAAAGAAGCCGATGGAGAAAGAAAAGAAGAGGAAACAGTGGGTAACCAAGAGGAAGAAGGGAAATTGGAGAAGAATATTCAAGGCCTTTAGGATATTATATGAACAAGTTGGTCTTGGTTGGGTTTACGCCATTACAAAATATGAACCACTGGGTATTGTGCTGGGAAAGGCTAAGAGTGGTGACCAGACTTATTGTGTTGTTGCAGATGAATCAACTAGAAGACAGGTTCCTATGGCCTTTCTAGAGCGTGTCAAGGATGATTTTGTGTCAAAATATGGTGGTGAAAAGGCTTCTACAGATCCTCCCAATAGCCTTAACAAGGAGTTTGGGCCAAAGTTGAAGGAACATATGCAATACTGTGTTGATCATTCTGACAAGATAAGCAAGCTTGCAAAGGTTACCACAAATGGAATAGCCTCAAGGGTTGATGGATATGGTGTTGATCTCAAGAAAGTGGTAGAAAAAGTAGAACATGGTTTTTTATGGAGAAATTCAGATTGGTACTCATTTGGGAAGTTATATGAAAAACTTCATAAATGGTTTATGAGACTTGATTCCTGTGGATTTGGTAATGTCCCCTTAAGCTATTATCGTATACTGCAGGCAAGAAGGTTTCTACAGGGTTATGGTTGTGACGGATATAGAATGAGAGAAGAAAATGGTTTTGTAGTAACCTGCTGGCAGGACAGGTCTTTGTTTTCAACAACAGTGTGGAGAGCTAGGAAGTAG
Protein sequence

>Msa0755860

MRNRESDGEKGKVTGEKQNERREGEEKKEKKPMEKEKKRKQWVTKRKKGNWRRIFKAFRILYEQVGLGWVYAITKYEPLGIVLGKAKSGDQTYCVVADESTRRQVPMAFLERVKDDFVSKYGGEKASTDPPNSLNKEFGPKLKEHMQYCVDHSDKISKLAKVTTNGIASRVDGYGVDLKKVVEKVEHGFLWRNSDWYSFGKLYEKLHKWFMRLDSCGFGNVPLSYYRILQARRFLQGYGCDGYRMREENGFVVTCWQDRSLFSTTVWRARK*