Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759500 | XP_003612426.2 | 89.935 | 616 | 50 | 2 | 1 | 616 | 1 | 604 | 0.0 | 1120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759500 | sp|Q940Y3|ARID3_ARATH | 66.975 | 324 | 89 | 3 | 294 | 616 | 480 | 786 | 1.21e-146 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759500 | G7K2M1 | 89.935 | 616 | 50 | 2 | 1 | 616 | 1 | 604 | 0.0 | 1120 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0759500 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759500 | MtrunA17_Chr5g0407561 | 89.935 | 616 | 50 | 2 | 1 | 616 | 1 | 604 | 0.0 | 1120 |
| Msa0759500 | MtrunA17_Chr3g0144341 | 54.737 | 380 | 120 | 4 | 247 | 615 | 32 | 370 | 2.63e-126 | 377 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759500 | AT2G17410.2 | 68.421 | 323 | 80 | 3 | 294 | 616 | 480 | 780 | 4.29e-150 | 452 |
| Msa0759500 | AT2G17410.1 | 66.975 | 324 | 89 | 3 | 294 | 616 | 480 | 786 | 1.23e-147 | 446 |
| Msa0759500 | AT2G17410.3 | 66.975 | 324 | 89 | 3 | 294 | 616 | 480 | 786 | 1.23e-147 | 446 |
| Msa0759500 | AT1G76510.2 | 52.732 | 366 | 135 | 7 | 268 | 614 | 88 | 434 | 2.35e-118 | 359 |
| Msa0759500 | AT1G76510.4 | 52.732 | 366 | 135 | 7 | 268 | 614 | 88 | 434 | 2.35e-118 | 359 |
| Msa0759500 | AT1G76510.1 | 52.732 | 366 | 135 | 7 | 268 | 614 | 88 | 434 | 2.35e-118 | 359 |
| Msa0759500 | AT1G76510.3 | 53.959 | 341 | 110 | 6 | 305 | 616 | 137 | 459 | 7.33e-112 | 344 |
| Msa0759500 | AT1G20910.1 | 54.603 | 315 | 121 | 4 | 305 | 614 | 101 | 398 | 3.28e-110 | 337 |
| Msa0759500 | AT1G20910.2 | 53.684 | 285 | 110 | 4 | 305 | 584 | 101 | 368 | 3.87e-93 | 292 |
Find 197 sgRNAs with CRISPR-Local
Find 615 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCAGCGTATCCAATTT+AGG | 0.103967 | 5_2:-15238767 | Msa0759500:five_prime_UTR |
| AAGCCATTCTCCATAAAATT+TGG | 0.109421 | 5_2:+15236845 | None:intergenic |
| TACCTCTAAATTGTTGTTTC+AGG | 0.131744 | 5_2:+15230573 | None:intergenic |
| CAGATGCCAATTTATATCTT+AGG | 0.171441 | 5_2:-15230532 | Msa0759500:three_prime_UTR |
| CAATTTAGAGGTATTGTTTA+TGG | 0.177672 | 5_2:-15230563 | Msa0759500:three_prime_UTR |
| GGCGGCTGATGCTCATATTT+TGG | 0.177729 | 5_2:-15237471 | Msa0759500:CDS |
| CCACAGTTTCCTGGACTTTC+CGG | 0.183968 | 5_2:-15235035 | Msa0759500:CDS |
| ATACGCTGATAAGTTGAATT+TGG | 0.192262 | 5_2:+15238777 | None:intergenic |
| TTCCACCAAACCTTTATAAT+AGG | 0.195321 | 5_2:+15232321 | None:intergenic |
| GTACTATTATTTATATTTAT+AGG | 0.196867 | 5_2:-15230605 | Msa0759500:three_prime_UTR |
| AACCTCAAACAGCACAATTT+AGG | 0.201766 | 5_2:-15238806 | Msa0759500:five_prime_UTR |
| AACATGTTCTGCGGCGAATC+TGG | 0.212068 | 5_2:+15236987 | None:intergenic |
| GTGTCAAATGATGTTAAAAT+TGG | 0.233662 | 5_2:-15237599 | Msa0759500:CDS |
| AGGAGCTTGAAAACTTCTTT+AGG | 0.247131 | 5_2:-15236893 | Msa0759500:CDS |
| TCTAAAACATTCTTGACTTC+TGG | 0.270928 | 5_2:+15237065 | None:intergenic |
| TGTCACTCCCCAAGGATTAT+TGG | 0.277598 | 5_2:+15230906 | None:intergenic |
| TTCTACCCTAAGATATAAAT+TGG | 0.278397 | 5_2:+15230526 | None:intergenic |
| ACCTCAAACAGCACAATTTA+GGG | 0.290842 | 5_2:-15238805 | Msa0759500:five_prime_UTR |
| GCGTCAAGCGCCGCGTTATT+TGG | 0.293754 | 5_2:+15238898 | None:intergenic |
| CACAGTTTCCTGGACTTTCC+GGG | 0.295395 | 5_2:-15235034 | Msa0759500:CDS |
| GAAATATATGCTTTAGTTCC+TGG | 0.296044 | 5_2:-15231652 | Msa0759500:CDS |
| TTATCAGCGTATCCAATTTA+GGG | 0.296470 | 5_2:-15238766 | Msa0759500:five_prime_UTR |
| CACTATTCTGACTGTTCAAA+TGG | 0.310977 | 5_2:+15230672 | None:intergenic |
| TACGAAAGGCATAACATAAA+AGG | 0.323371 | 5_2:-15233534 | Msa0759500:CDS |
| TAGAATATATATTTAATGTT+AGG | 0.327948 | 5_2:-15230508 | Msa0759500:three_prime_UTR |
| TGGCACTCACAACGTCTTCT+TGG | 0.335482 | 5_2:-15232363 | Msa0759500:CDS |
| TATTGATAATCTTGCTGGTT+TGG | 0.335988 | 5_2:-15237699 | Msa0759500:CDS |
| TCCACCAAACCTTTATAATA+GGG | 0.338104 | 5_2:+15232322 | None:intergenic |
| GCCTGTGAATGTTGAAAATC+AGG | 0.345539 | 5_2:-15233475 | Msa0759500:intron |
| GAGGCAGGTTGTGGTGTAGT+AGG | 0.349558 | 5_2:+15237227 | None:intergenic |
| GGGAGTGACACCTTTCAAAA+AGG | 0.350217 | 5_2:-15230893 | Msa0759500:intron |
| GGAGCTTGAAAACTTCTTTA+GGG | 0.352045 | 5_2:-15236892 | Msa0759500:CDS |
| AGCCATTCTCCATAAAATTT+GGG | 0.353493 | 5_2:+15236846 | None:intergenic |
| GGACATGCACCACAGTTTCC+TGG | 0.366165 | 5_2:-15235044 | Msa0759500:CDS |
| GAGGAGAGAAAACCCTAAAT+TGG | 0.367657 | 5_2:+15238754 | None:intergenic |
| ACCCTAAATTGTGCTGTTTG+AGG | 0.368751 | 5_2:+15238804 | None:intergenic |
| CATAGGACCTTCTGCTGATT+GGG | 0.368858 | 5_2:-15231795 | Msa0759500:CDS |
| ACTTCTGGCCTTGTATCATC+AGG | 0.373111 | 5_2:+15237080 | None:intergenic |
| ACATAGGACCTTCTGCTGAT+TGG | 0.380929 | 5_2:-15231796 | Msa0759500:CDS |
| ACCCTGAAACAACAATTTAG+AGG | 0.382932 | 5_2:-15230575 | Msa0759500:three_prime_UTR |
| TTGTTATTACTCAACGATAT+AGG | 0.385173 | 5_2:+15237251 | None:intergenic |
| TGAGCATCAGCCGCCTCAAC+TGG | 0.386484 | 5_2:+15237479 | None:intergenic |
| GAAGTTTCCTCTACAGTAAC+CGG | 0.388879 | 5_2:+15237638 | None:intergenic |
| ATGATTATTGATAATCTTGC+TGG | 0.390384 | 5_2:-15237704 | Msa0759500:CDS |
| TGAAGTGGGTCAGGGTGTTC+CGG | 0.390428 | 5_2:-15237822 | Msa0759500:CDS |
| GCTTCAACTAGTCCACAATT+AGG | 0.393303 | 5_2:-15237740 | Msa0759500:CDS |
| GTCACTCCCCAAGGATTATT+GGG | 0.393969 | 5_2:+15230907 | None:intergenic |
| TACTTGTTTGTGTAGTTAGA+AGG | 0.394996 | 5_2:-15231938 | Msa0759500:intron |
| CCGGAGATATGCTGCTGAAC+AGG | 0.399445 | 5_2:-15232397 | Msa0759500:CDS |
| AGTTGGTGACCCTATTATAA+AGG | 0.400416 | 5_2:-15232331 | Msa0759500:intron |
| CATGTTAATATGAGCTAGTA+AGG | 0.400793 | 5_2:-15230457 | Msa0759500:three_prime_UTR |
| ATCAGACCCAGCCGGACGTT+TGG | 0.401109 | 5_2:-15230953 | Msa0759500:CDS |
| TATACTTGTGGCCAGCTTAA+CGG | 0.401447 | 5_2:+15230381 | None:intergenic |
| TGCTGCTGAACAGGCTATGC+GGG | 0.403913 | 5_2:-15232388 | Msa0759500:CDS |
| ACCTCTAAATTGTTGTTTCA+GGG | 0.412735 | 5_2:+15230574 | None:intergenic |
| AGAAAACGATGAAGTGGGTC+AGG | 0.415887 | 5_2:-15237831 | Msa0759500:CDS |
| GAGGCAGGTTGTGGTGTAGT+AGG | 0.418578 | 5_2:+15237164 | None:intergenic |
| ACCTCCTCCCGCAGAAGGCC+AGG | 0.425504 | 5_2:+15231634 | None:intergenic |
| CTTATGACCAAACGTCCGGC+TGG | 0.432111 | 5_2:+15230946 | None:intergenic |
| CGATCCTACTACACCACAAC+CGG | 0.432499 | 5_2:-15237105 | Msa0759500:CDS |
| TCATTATCATTTGACAGTAT+AGG | 0.436878 | 5_2:+15237188 | None:intergenic |
| AACATATGTGGCTGCTAGGT+TGG | 0.437374 | 5_2:-15231834 | Msa0759500:CDS |
| GTATCATCAGGGGCCGGTTG+TGG | 0.439443 | 5_2:+15237092 | None:intergenic |
| TGATCATCCCAATAATCCTT+GGG | 0.439731 | 5_2:-15230914 | Msa0759500:CDS |
| CTGAACAGGCTATGCGGGGT+TGG | 0.442024 | 5_2:-15232383 | Msa0759500:CDS |
| CAAGGATTATTGGGATGATC+AGG | 0.443990 | 5_2:+15230916 | None:intergenic |
| TGTGTCTAGGGTTTAGCATC+AGG | 0.444410 | 5_2:-15232426 | Msa0759500:intron |
| CTGATCATCCCAATAATCCT+TGG | 0.446763 | 5_2:-15230915 | Msa0759500:CDS |
| ATGGAGAGCTGTAATGAGGT+TGG | 0.446791 | 5_2:-15236696 | Msa0759500:CDS |
| AGATGCCAATTTATATCTTA+GGG | 0.447119 | 5_2:-15230531 | Msa0759500:three_prime_UTR |
| ACACCTTCTGAAACAACCTT+GGG | 0.452686 | 5_2:+15237539 | None:intergenic |
| CCTGTTCAGCAGCATATCTC+CGG | 0.454295 | 5_2:+15232397 | None:intergenic |
| AAATTTGTAACTTGTAAGAA+AGG | 0.455505 | 5_2:+15230631 | None:intergenic |
| TTCATTAGATTCCGTTAAGC+TGG | 0.459911 | 5_2:-15230392 | Msa0759500:three_prime_UTR |
| TACAAAAGAAAACGATGAAG+TGG | 0.463203 | 5_2:-15237837 | Msa0759500:CDS |
| TTTAGTTCCTGGCCTTCTGC+GGG | 0.466389 | 5_2:-15231641 | Msa0759500:CDS |
| TGGAGAGCTGTAATGAGGTT+GGG | 0.468118 | 5_2:-15236695 | Msa0759500:CDS |
| TCGTTATGATTTGACAGTAT+AGG | 0.469624 | 5_2:+15237125 | None:intergenic |
| ACATATGTGGCTGCTAGGTT+GGG | 0.470840 | 5_2:-15231833 | Msa0759500:CDS |
| TCCTGGCCTTCTGCGGGAGG+AGG | 0.479319 | 5_2:-15231635 | Msa0759500:intron |
| TTGTGCTGTTTGAGGTTTGA+AGG | 0.481385 | 5_2:+15238812 | None:intergenic |
| ACATGTTCTGCGGCGAATCT+GGG | 0.482417 | 5_2:+15236988 | None:intergenic |
| AACACCTTCTGAAACAACCT+TGG | 0.483020 | 5_2:+15237538 | None:intergenic |
| GATGCATCTTGAAGTTCAAC+CGG | 0.489348 | 5_2:-15237657 | Msa0759500:CDS |
| GTATTAGAAGAGGCAGGTTG+TGG | 0.491030 | 5_2:+15237155 | None:intergenic |
| GCATCAGAAGAGGCAGGTTG+TGG | 0.496341 | 5_2:+15237218 | None:intergenic |
| GCAGCTTAAGAGCATCAGTA+TGG | 0.497356 | 5_2:-15232185 | Msa0759500:intron |
| AATCTCTCATGGCTATAAGT+TGG | 0.497719 | 5_2:+15231903 | None:intergenic |
| GGCCTTGTATCATCAGGGGC+CGG | 0.499215 | 5_2:+15237086 | None:intergenic |
| AATGATAGCGGTGGAGGTTG+AGG | 0.504545 | 5_2:-15237324 | Msa0759500:CDS |
| TGTCAAATGATGTTAAAATT+GGG | 0.507836 | 5_2:-15237598 | Msa0759500:CDS |
| TCCTCTACATTAACATTCGC+CGG | 0.508778 | 5_2:+15237803 | None:intergenic |
| CTTTAGTTCCTGGCCTTCTG+CGG | 0.509492 | 5_2:-15231642 | Msa0759500:CDS |
| TTGAAAACTTCTTTAGGGAG+AGG | 0.509895 | 5_2:-15236887 | Msa0759500:CDS |
| ACAGCCGCTACACAGACTTC+AGG | 0.510766 | 5_2:+15237296 | None:intergenic |
| TATTATGACGGAAATGAGTC+GGG | 0.512876 | 5_2:-15236945 | Msa0759500:CDS |
| CCTTCAATCTCAATTTGCAC+AGG | 0.513936 | 5_2:-15238716 | Msa0759500:intron |
| CCTCAACTGGAACCGTATGA+AGG | 0.517198 | 5_2:+15237492 | None:intergenic |
| CTTCTGGCCTTGTATCATCA+GGG | 0.519242 | 5_2:+15237081 | None:intergenic |
| TCATTTGTATTAGAAGAGGC+AGG | 0.520784 | 5_2:+15237149 | None:intergenic |
| ATGTAAGTTGTGGCGGAGTG+TGG | 0.521969 | 5_2:-15235846 | Msa0759500:CDS |
| TCATTTGCATCAGAAGAGGC+AGG | 0.525063 | 5_2:+15237212 | None:intergenic |
| CCAAAGTACAAAATCTCTCA+TGG | 0.526781 | 5_2:+15231892 | None:intergenic |
| CTTCTTTAGGGAGAGGAGCA+TGG | 0.528705 | 5_2:-15236880 | Msa0759500:CDS |
| CATTGAGCACTTTATACTTG+TGG | 0.529465 | 5_2:+15230369 | None:intergenic |
| GATGCTGATCATTATTATGA+CGG | 0.531097 | 5_2:-15236957 | Msa0759500:CDS |
| TTATTATGACGGAAATGAGT+CGG | 0.531420 | 5_2:-15236946 | Msa0759500:CDS |
| CATGCCTATGCTAACATATG+TGG | 0.531856 | 5_2:-15231846 | Msa0759500:CDS |
| CTTCTTGGCAATGGTGAAGT+TGG | 0.532211 | 5_2:-15232348 | Msa0759500:CDS |
| ATAAATATAAATAATAGTAC+AGG | 0.532345 | 5_2:+15230608 | None:intergenic |
| ACTATTCTGACTGTTCAAAT+GGG | 0.533014 | 5_2:+15230673 | None:intergenic |
| GGGGCCGGTTGTGGTGTAGT+AGG | 0.535932 | 5_2:+15237101 | None:intergenic |
| CTGTGCAAATTGAGATTGAA+GGG | 0.538165 | 5_2:+15238717 | None:intergenic |
| TATGCCTTTCGTAATCAAGA+AGG | 0.542010 | 5_2:+15233544 | None:intergenic |
| TTGAAAGGTGTCACTCCCCA+AGG | 0.543336 | 5_2:+15230898 | None:intergenic |
| CAAGTTAGTCCTTACTTTGG+GGG | 0.545916 | 5_2:+15235809 | None:intergenic |
| AGTTCCTGGCCTTCTGCGGG+AGG | 0.546177 | 5_2:-15231638 | Msa0759500:CDS |
| ATACGCTTCTTGTGGGAAGT+AGG | 0.546206 | 5_2:+15230297 | None:intergenic |
| CCTTCATACGGTTCCAGTTG+AGG | 0.546294 | 5_2:-15237492 | Msa0759500:CDS |
| AAACCCAAGGTTGTTTCAGA+AGG | 0.546742 | 5_2:-15237542 | Msa0759500:CDS |
| TGATGAGGATCAATTCTTGA+GGG | 0.548659 | 5_2:+15230741 | None:intergenic |
| TCACCTTCTCATAAAATCCC+CGG | 0.551152 | 5_2:+15235016 | None:intergenic |
| AACCGGCCCCTGATGATACA+AGG | 0.553789 | 5_2:-15237088 | Msa0759500:CDS |
| TCATCATCATCTCCTAATTG+TGG | 0.554329 | 5_2:+15237728 | None:intergenic |
| GCCGCTTATGACCAAACGTC+CGG | 0.554765 | 5_2:+15230942 | None:intergenic |
| AGTTCAACCGGTTACTGTAG+AGG | 0.554846 | 5_2:-15237645 | Msa0759500:CDS |
| TGTTCAAGATACCCTTCATA+CGG | 0.555526 | 5_2:-15237504 | Msa0759500:CDS |
| ATTTGGAGTAAAAGAACTGA+GGG | 0.556283 | 5_2:+15238915 | None:intergenic |
| TTATGACCAAACGTCCGGCT+GGG | 0.557342 | 5_2:+15230947 | None:intergenic |
| CATTTGAACAGTCAGAATAG+TGG | 0.560731 | 5_2:-15230671 | Msa0759500:exon |
| GTAGTACCTCCTCCCGCAGA+AGG | 0.560789 | 5_2:+15231629 | None:intergenic |
| ATAAAATCCCCGGAAAGTCC+AGG | 0.561547 | 5_2:+15235026 | None:intergenic |
| TGTTGAAATGATAGCGGTGG+AGG | 0.562175 | 5_2:-15237330 | Msa0759500:CDS |
| CCTGTGCAAATTGAGATTGA+AGG | 0.568596 | 5_2:+15238716 | None:intergenic |
| AGTAACGGTGTTGAGAATGA+TGG | 0.568957 | 5_2:-15237386 | Msa0759500:CDS |
| TGCTAGGTTGGGAACAGCTG+TGG | 0.569777 | 5_2:-15231822 | Msa0759500:CDS |
| AGGCCCTTCTTGATTACGAA+AGG | 0.570162 | 5_2:-15233548 | Msa0759500:CDS |
| CTGTTCAGCAGCATATCTCC+GGG | 0.570165 | 5_2:+15232398 | None:intergenic |
| TCAACATTCACAGGCTCTGG+AGG | 0.570563 | 5_2:+15233483 | None:intergenic |
| GCTCCTTCATAAAAGCTGCT+TGG | 0.572842 | 5_2:+15236910 | None:intergenic |
| TTAGAAGTTGAAAGTAAGGG+TGG | 0.573767 | 5_2:-15237047 | Msa0759500:CDS |
| GGAACAGCTGTGGTTGACAT+AGG | 0.574547 | 5_2:-15231812 | Msa0759500:CDS |
| ACAGTTTCCTGGACTTTCCG+GGG | 0.575226 | 5_2:-15235033 | Msa0759500:CDS |
| CTCAACTGGAACCGTATGAA+GGG | 0.577282 | 5_2:+15237493 | None:intergenic |
| TCAGCTGTGGTAACGCTGCA+TGG | 0.579783 | 5_2:-15230714 | Msa0759500:CDS |
| GGCTCTGGAGGAGATGTGAC+AGG | 0.581414 | 5_2:+15233495 | None:intergenic |
| AGATGCTTCTGATGTGAAGA+TGG | 0.583247 | 5_2:-15237432 | Msa0759500:CDS |
| AGGTTCATTTGCATCAGAAG+AGG | 0.583304 | 5_2:+15237208 | None:intergenic |
| TGTTAAAATTGGGAAGGAAG+AGG | 0.583384 | 5_2:-15237588 | Msa0759500:CDS |
| AAACTTCCTCTGAGTAGTAA+CGG | 0.584178 | 5_2:-15237401 | Msa0759500:CDS |
| CATTCTCCATAAAATTTGGG+AGG | 0.584904 | 5_2:+15236849 | None:intergenic |
| GTTTAGCATCAGGTAGATCC+CGG | 0.586774 | 5_2:-15232416 | Msa0759500:CDS |
| ATGCCTTTCGTAATCAAGAA+GGG | 0.591525 | 5_2:+15233545 | None:intergenic |
| ACGCAAATTTCATGTTGAAG+CGG | 0.593284 | 5_2:+15238848 | None:intergenic |
| GCAGCCACATATGTTAGCAT+AGG | 0.593708 | 5_2:+15231842 | None:intergenic |
| TCACAACGTCTTCTTGGCAA+TGG | 0.594276 | 5_2:-15232357 | Msa0759500:CDS |
| AAATGAGTCGGGAACAGAAG+AGG | 0.595188 | 5_2:-15236934 | Msa0759500:CDS |
| GGTTATGGAGAGCTGTAATG+AGG | 0.597735 | 5_2:-15236700 | Msa0759500:CDS |
| AGGTTCATTTGTATTAGAAG+AGG | 0.598877 | 5_2:+15237145 | None:intergenic |
| TGCTAACATATGTGGCTGCT+AGG | 0.601537 | 5_2:-15231838 | Msa0759500:CDS |
| CTGATGAGGATCAATTCTTG+AGG | 0.604531 | 5_2:+15230740 | None:intergenic |
| AAATGATGTTAAAATTGGGA+AGG | 0.607157 | 5_2:-15237594 | Msa0759500:CDS |
| AGGTAACCTCATGTAAGTTG+TGG | 0.607979 | 5_2:-15235856 | Msa0759500:CDS |
| CTTACTAGCTCATATTAACA+TGG | 0.609933 | 5_2:+15230458 | None:intergenic |
| TGTAAGTTGTGGCGGAGTGT+GGG | 0.610524 | 5_2:-15235845 | Msa0759500:CDS |
| ACAAAAGAAAACGATGAAGT+GGG | 0.617681 | 5_2:-15237836 | Msa0759500:CDS |
| GCCGGACGTTTGGTCATAAG+CGG | 0.619797 | 5_2:-15230943 | Msa0759500:CDS |
| TAACCTCATGTAAGTTGTGG+CGG | 0.622380 | 5_2:-15235853 | Msa0759500:CDS |
| GAGGTTGGGAGGCTATGAGA+AGG | 0.627081 | 5_2:-15236681 | Msa0759500:intron |
| TTCTGGCCTTGTATCATCAG+GGG | 0.628379 | 5_2:+15237082 | None:intergenic |
| TATAAAATATGCATGATGGT+TGG | 0.635367 | 5_2:-15230415 | Msa0759500:three_prime_UTR |
| TCATACGGTTCCAGTTGAGG+CGG | 0.635924 | 5_2:-15237489 | Msa0759500:CDS |
| TGTCAAAATAATGTTAGTGA+TGG | 0.638630 | 5_2:-15237356 | Msa0759500:CDS |
| GAAAACGATGAAGTGGGTCA+GGG | 0.643484 | 5_2:-15237830 | Msa0759500:CDS |
| ATGCTGCTGAACAGGCTATG+CGG | 0.643981 | 5_2:-15232389 | Msa0759500:CDS |
| ATGTTATAAAATATGCATGA+TGG | 0.647166 | 5_2:-15230419 | Msa0759500:three_prime_UTR |
| TATTTGGAGTAAAAGAACTG+AGG | 0.647438 | 5_2:+15238914 | None:intergenic |
| CTGACTGTTCAAATGGGACA+CGG | 0.651455 | 5_2:+15230679 | None:intergenic |
| ACCACAGCTGATGTCTGATG+AGG | 0.655388 | 5_2:+15230726 | None:intergenic |
| TCCGGCGAATGTTAATGTAG+AGG | 0.660878 | 5_2:-15237804 | Msa0759500:CDS |
| TCCTCATCAGACATCAGCTG+TGG | 0.666911 | 5_2:-15230727 | Msa0759500:CDS |
| CGTGTTCAATCAGACCCAGC+CGG | 0.671557 | 5_2:-15230961 | Msa0759500:CDS |
| AAGGGCGATCCTAAAGTGTG+AGG | 0.678196 | 5_2:+15238735 | None:intergenic |
| GATCATCCCAATAATCCTTG+GGG | 0.679794 | 5_2:-15230913 | Msa0759500:CDS |
| GCTGCTGAACAGGCTATGCG+GGG | 0.681802 | 5_2:-15232387 | Msa0759500:CDS |
| AGAGCTGTAATGAGGTTGGG+AGG | 0.685164 | 5_2:-15236692 | Msa0759500:CDS |
| TGATGTTGAAATGATAGCGG+TGG | 0.687218 | 5_2:-15237333 | Msa0759500:CDS |
| CCGGAAAGTCCAGGAAACTG+TGG | 0.687700 | 5_2:+15235035 | None:intergenic |
| TCAACACCGTTACTACTCAG+AGG | 0.690526 | 5_2:+15237395 | None:intergenic |
| GGATGAAAATGTGAAACCCA+AGG | 0.695062 | 5_2:-15237555 | Msa0759500:CDS |
| GAAAGGCATAACATAAAAGG+CGG | 0.700632 | 5_2:-15233531 | Msa0759500:CDS |
| GAAGGAAGAGGTGCATGCTG+AGG | 0.700761 | 5_2:-15237576 | Msa0759500:CDS |
| GGAGTAAAAGAACTGAGGGG+AGG | 0.701859 | 5_2:+15238919 | None:intergenic |
| ACTCCGCCACAACTTACATG+AGG | 0.707054 | 5_2:+15235850 | None:intergenic |
| TGGTGATGTTGAAATGATAG+CGG | 0.713851 | 5_2:-15237336 | Msa0759500:CDS |
| TTTGGAGTAAAAGAACTGAG+GGG | 0.737892 | 5_2:+15238916 | None:intergenic |
| GAAGCCTGAAGTCTGTGTAG+CGG | 0.738969 | 5_2:-15237300 | Msa0759500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr5_2:15234496-15234515 | Msa0759500:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr5_2:15234495-15234514 | Msa0759500:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr5_2:15234495-15234514 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr5_2:15234496-15234515 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr5_2:15234495-15234514 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr5_2:15234496-15234515 | None:intergenic | 0.0% |
| !! | TATATATATATATATATAGG+GGG | - | chr5_2:15234499-15234518 | Msa0759500:intron | 10.0% |
| !!! | ATTAATTTGAATAGATAAAA+GGG | + | chr5_2:15234600-15234619 | None:intergenic | 10.0% |
| !!! | AATTAATTTGAATAGATAAA+AGG | + | chr5_2:15234601-15234620 | None:intergenic | 10.0% |
| !!! | TCAAATTAATTTTAAATTGA+AGG | - | chr5_2:15234610-15234629 | Msa0759500:intron | 10.0% |
| !!! | CAAATTAATTTTAAATTGAA+GGG | - | chr5_2:15234611-15234630 | Msa0759500:intron | 10.0% |
| !!! | TTATTCAACTTAATTTTAAA+AGG | + | chr5_2:15235183-15235202 | None:intergenic | 10.0% |
| !!! | TTTTTTAGTAAATAATTAGT+GGG | - | chr5_2:15235214-15235233 | Msa0759500:intron | 10.0% |
| !!! | TTTTTTAGTAAATAATTAGT+GGG | - | chr5_2:15235214-15235233 | Msa0759500:intron | 10.0% |
| !! | TATATAATATATATTCTTGT+TGG | - | chr5_2:15235490-15235509 | Msa0759500:intron | 10.0% |
| !! | TTAAAAAAACAAGATTAAAT+AGG | + | chr5_2:15236152-15236171 | None:intergenic | 10.0% |
| !!! | ATAAATTTTAATTATGTTGT+AGG | - | chr5_2:15237104-15237123 | Msa0759500:CDS | 10.0% |
| !! | AAAATAATTATGGTTTAAAA+AGG | + | chr5_2:15238392-15238411 | None:intergenic | 10.0% |
| !! | ATAAATATAAATAATAGTAC+AGG | + | chr5_2:15238643-15238662 | None:intergenic | 10.0% |
| !! | GTACTATTATTTATATTTAT+AGG | - | chr5_2:15238643-15238662 | Msa0759500:intron | 10.0% |
| !! | TAGAATATATATTTAATGTT+AGG | - | chr5_2:15238740-15238759 | Msa0759500:five_prime_UTR | 10.0% |
| !! | TTGAATTAATATAATGAAGT+TGG | - | chr5_2:15231340-15231359 | Msa0759500:intron | 15.0% |
| !! | TCATGATAATTTATGATAAT+TGG | + | chr5_2:15233016-15233035 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTTTTAATTCTT+GGG | - | chr5_2:15233210-15233229 | Msa0759500:intron | 15.0% |
| !! | AAATGAAAATTGGAAATATA+AGG | + | chr5_2:15233512-15233531 | None:intergenic | 15.0% |
| !! | GAAAAAAAACAAATGAAAAT+TGG | + | chr5_2:15233522-15233541 | None:intergenic | 15.0% |
| !!! | TGCAATTTTTTTTTATGATA+TGG | - | chr5_2:15234072-15234091 | Msa0759500:intron | 15.0% |
| !!! | GCAATTTTTTTTTATGATAT+GGG | - | chr5_2:15234073-15234092 | Msa0759500:intron | 15.0% |
| !! | TAGAAATTACAAATATAGTT+TGG | - | chr5_2:15234309-15234328 | Msa0759500:intron | 15.0% |
| !! | AGAAATTACAAATATAGTTT+GGG | - | chr5_2:15234310-15234329 | Msa0759500:intron | 15.0% |
| !!! | ATTAAGTTGAATAATGATAA+AGG | - | chr5_2:15235189-15235208 | Msa0759500:intron | 15.0% |
| !!! | TTAAGTTGAATAATGATAAA+GGG | - | chr5_2:15235190-15235209 | Msa0759500:intron | 15.0% |
| !!! | CTTTTTTAGTAAATAATTAG+TGG | - | chr5_2:15235213-15235232 | Msa0759500:intron | 15.0% |
| !!! | ATTAAGTTGAATAATGATAA+AGG | - | chr5_2:15235189-15235208 | Msa0759500:intron | 15.0% |
| !!! | TTAAGTTGAATAATGATAAA+GGG | - | chr5_2:15235190-15235209 | Msa0759500:intron | 15.0% |
| !!! | CTTTTTTAGTAAATAATTAG+TGG | - | chr5_2:15235213-15235232 | Msa0759500:intron | 15.0% |
| !!! | AATTTTGTTGGTATATTTAT+AGG | - | chr5_2:15236027-15236046 | Msa0759500:intron | 15.0% |
| !! | CTTTCTTGAAATTAAATATA+AGG | - | chr5_2:15236472-15236491 | Msa0759500:intron | 15.0% |
| !! | TGCAGTTAATAATAATATAT+GGG | + | chr5_2:15236536-15236555 | None:intergenic | 15.0% |
| !! | ATGCAGTTAATAATAATATA+TGG | + | chr5_2:15236537-15236556 | None:intergenic | 15.0% |
| !! | ATTTACTATGAATATTTACA+TGG | + | chr5_2:15237908-15237927 | None:intergenic | 15.0% |
| !! | AAAGATTTATTATATAGACT+GGG | + | chr5_2:15237943-15237962 | None:intergenic | 15.0% |
| !! | TAAAGATTTATTATATAGAC+TGG | + | chr5_2:15237944-15237963 | None:intergenic | 15.0% |
| !!! | GCACGTTTTTTTTTTTTTTT+TGG | - | chr5_2:15230657-15230676 | Msa0759500:exon | 20.0% |
| !! | AATTAGAAATGACAACATTA+GGG | - | chr5_2:15230925-15230944 | Msa0759500:CDS | 20.0% |
| !! | AAAACAAAAAAATGGAATCA+AGG | + | chr5_2:15231294-15231313 | None:intergenic | 20.0% |
| !! | TTCAACATTCAAGAAAAAAT+TGG | + | chr5_2:15231325-15231344 | None:intergenic | 20.0% |
| !! | TGTCAAATGATGTTAAAATT+GGG | - | chr5_2:15231650-15231669 | Msa0759500:CDS | 20.0% |
| !! | ATTTATGTCATATTCAAAGA+TGG | + | chr5_2:15232471-15232490 | None:intergenic | 20.0% |
| !! | AAAACGATTAAATATTGTAG+AGG | - | chr5_2:15232656-15232675 | Msa0759500:intron | 20.0% |
| !!! | AGTTGTTTTGAAATTGAATT+TGG | - | chr5_2:15232733-15232752 | Msa0759500:intron | 20.0% |
| !! | AGATAATTTAAACTCTTAGA+AGG | - | chr5_2:15232869-15232888 | Msa0759500:intron | 20.0% |
| !! | CAAATACAATTCAAAATATG+TGG | - | chr5_2:15232968-15232987 | Msa0759500:intron | 20.0% |
| !! | ATCATAAATTATCATGACAA+TGG | - | chr5_2:15233019-15233038 | Msa0759500:intron | 20.0% |
| !!! | TAATGGTATTTGTTAATTAC+TGG | - | chr5_2:15233051-15233070 | Msa0759500:intron | 20.0% |
| !! | ATTTAACAAAAAAGATTCCT+GGG | + | chr5_2:15233114-15233133 | None:intergenic | 20.0% |
| !! | AATTTAACAAAAAAGATTCC+TGG | + | chr5_2:15233115-15233134 | None:intergenic | 20.0% |
| !!! | CACAATTTTCTTTTAATTCT+TGG | - | chr5_2:15233209-15233228 | Msa0759500:intron | 20.0% |
| !! | TTATAGGATATATACCTAAT+TGG | - | chr5_2:15233354-15233373 | Msa0759500:intron | 20.0% |
| !! | GTTTCAAATTACAAGAATAA+CGG | + | chr5_2:15233668-15233687 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTATGATATGGG+TGG | - | chr5_2:15234076-15234095 | Msa0759500:intron | 20.0% |
| !! | ATATATTACTGAGAATAATC+AGG | + | chr5_2:15234154-15234173 | None:intergenic | 20.0% |
| !! | AATGTCGAAATTCAAATAAA+AGG | + | chr5_2:15234289-15234308 | None:intergenic | 20.0% |
| !! | CAATCTTGTGAAAAATAAAT+TGG | - | chr5_2:15234410-15234429 | Msa0759500:intron | 20.0% |
| !! | AAAAAATTATGTCCATGTAT+TGG | + | chr5_2:15234651-15234670 | None:intergenic | 20.0% |
| !! | ATAAATCAATTCTACAACAT+TGG | + | chr5_2:15234862-15234881 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGAATAATGACAA+AGG | - | chr5_2:15234967-15234986 | Msa0759500:intron | 20.0% |
| !!! | TTAAGTTGAATAATGACAAA+GGG | - | chr5_2:15234968-15234987 | Msa0759500:intron | 20.0% |
| !!! | CAACTTAATTTTAAAAGGAA+GGG | + | chr5_2:15235178-15235197 | None:intergenic | 20.0% |
| !!! | TCAACTTAATTTTAAAAGGA+AGG | + | chr5_2:15235179-15235198 | None:intergenic | 20.0% |
| !! | GAACAATAATGATCTATATA+AGG | - | chr5_2:15235827-15235846 | Msa0759500:CDS | 20.0% |
| !!! | TTTTTTTTTGCTTTCATTCT+GGG | + | chr5_2:15236082-15236101 | None:intergenic | 20.0% |
| !!! | GAATAAACAAAAGTTTTTCT+TGG | + | chr5_2:15236188-15236207 | None:intergenic | 20.0% |
| !! | TTAATAATAATATATGGGTG+GGG | + | chr5_2:15236531-15236550 | None:intergenic | 20.0% |
| !! | GTTAATAATAATATATGGGT+GGG | + | chr5_2:15236532-15236551 | None:intergenic | 20.0% |
| !! | AGTTAATAATAATATATGGG+TGG | + | chr5_2:15236533-15236552 | None:intergenic | 20.0% |
| !! | AAGAAAACAGAAAATGAAAA+AGG | + | chr5_2:15236971-15236990 | None:intergenic | 20.0% |
| !! | AAGATTTATTATATAGACTG+GGG | + | chr5_2:15237942-15237961 | None:intergenic | 20.0% |
| !! | ATAATTATGGTTTAAAAAGG+AGG | + | chr5_2:15238389-15238408 | None:intergenic | 20.0% |
| !! | CAAGAACAACAAAATAATTA+TGG | + | chr5_2:15238402-15238421 | None:intergenic | 20.0% |
| !! | AACAAATAATTTGATGAATC+AGG | - | chr5_2:15238473-15238492 | Msa0759500:intron | 20.0% |
| !!! | AAATTTGTAACTTGTAAGAA+AGG | + | chr5_2:15238620-15238639 | None:intergenic | 20.0% |
| !! | ATGTTATAAAATATGCATGA+TGG | - | chr5_2:15238829-15238848 | Msa0759500:five_prime_UTR | 20.0% |
| !!! | TTTTTTGGTTTAGTAAACCA+TGG | - | chr5_2:15230672-15230691 | Msa0759500:exon | 25.0% |
| ! | TTGTTCTATAAGTAGATTAC+TGG | - | chr5_2:15230695-15230714 | Msa0759500:CDS | 25.0% |
| ! | GAATTAGAAATGACAACATT+AGG | - | chr5_2:15230924-15230943 | Msa0759500:CDS | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr5_2:15231094-15231113 | None:intergenic | 25.0% |
| ! | TATAAGAGAAACTAGTAAGA+AGG | - | chr5_2:15231102-15231121 | Msa0759500:intron | 25.0% |
| !!! | GTTCTTGTGTTTCTTTTTTT+TGG | - | chr5_2:15231237-15231256 | Msa0759500:intron | 25.0% |
| !!! | TAATATAATGAAGTTGGTGT+AGG | - | chr5_2:15231346-15231365 | Msa0759500:intron | 25.0% |
| !!! | AATATAATGAAGTTGGTGTA+GGG | - | chr5_2:15231347-15231366 | Msa0759500:intron | 25.0% |
| !! | ATGATTATTGATAATCTTGC+TGG | - | chr5_2:15231544-15231563 | Msa0759500:intron | 25.0% |
| ! | GTGTCAAATGATGTTAAAAT+TGG | - | chr5_2:15231649-15231668 | Msa0759500:CDS | 25.0% |
| ! | AAATGATGTTAAAATTGGGA+AGG | - | chr5_2:15231654-15231673 | Msa0759500:CDS | 25.0% |
| ! | TGTCAAAATAATGTTAGTGA+TGG | - | chr5_2:15231892-15231911 | Msa0759500:CDS | 25.0% |
| !! | TTGTTATTACTCAACGATAT+AGG | + | chr5_2:15232000-15232019 | None:intergenic | 25.0% |
| ! | TCATTATCATTTGACAGTAT+AGG | + | chr5_2:15232063-15232082 | None:intergenic | 25.0% |
| !!! | TGTTTTAGAAGTTGAAAGTA+AGG | - | chr5_2:15232197-15232216 | Msa0759500:CDS | 25.0% |
| !!! | GTTTTAGAAGTTGAAAGTAA+GGG | - | chr5_2:15232198-15232217 | Msa0759500:CDS | 25.0% |
| ! | TTCATTCAAATTTATGTAGC+TGG | - | chr5_2:15232626-15232645 | Msa0759500:intron | 25.0% |
| !! | TCGATAGCGATTTTAAATAT+TGG | - | chr5_2:15232679-15232698 | Msa0759500:intron | 25.0% |
| !!! | CGATTTTAAATATTGGTTGA+TGG | - | chr5_2:15232686-15232705 | Msa0759500:intron | 25.0% |
| ! | ACAACACACATATAAATATG+TGG | - | chr5_2:15232846-15232865 | Msa0759500:intron | 25.0% |
| ! | TTTGTAAATTTGGCTACTTA+AGG | - | chr5_2:15233170-15233189 | Msa0759500:intron | 25.0% |
| !!! | AAGTTGTTTTCGTTGTTTAT+AGG | - | chr5_2:15233338-15233357 | Msa0759500:intron | 25.0% |
| ! | TTCAAAAATACAAGCCAATT+AGG | + | chr5_2:15233371-15233390 | None:intergenic | 25.0% |
| !!! | ATTGGCTTGTATTTTTGAAT+AGG | - | chr5_2:15233372-15233391 | Msa0759500:intron | 25.0% |
| ! | ATCTTCTTAGAATGTTTGTT+TGG | - | chr5_2:15233589-15233608 | Msa0759500:intron | 25.0% |
| !! | ATATGGTCTTAACAATAAGT+GGG | + | chr5_2:15233862-15233881 | None:intergenic | 25.0% |
| ! | TTACACATTGGATATTGATA+TGG | + | chr5_2:15233879-15233898 | None:intergenic | 25.0% |
| ! | TTTATCCAAAAAGCTCAAAA+AGG | + | chr5_2:15234131-15234150 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTAAACTACAAGT+GGG | + | chr5_2:15234577-15234596 | None:intergenic | 25.0% |
| ! | GTTTAGTAATTACCAATACA+TGG | - | chr5_2:15234636-15234655 | Msa0759500:intron | 25.0% |
| ! | AGACAAATCAACATCTATAA+GGG | + | chr5_2:15234697-15234716 | None:intergenic | 25.0% |
| ! | AAGACAAATCAACATCTATA+AGG | + | chr5_2:15234698-15234717 | None:intergenic | 25.0% |
| !! | GTTGTAGAATTGATTTATGA+TGG | - | chr5_2:15234864-15234883 | Msa0759500:intron | 25.0% |
| !! | TAAGTTGAATAATGACAAAG+GGG | - | chr5_2:15234969-15234988 | Msa0759500:intron | 25.0% |
| !! | TTTTTCTTCCTGATAAAAAC+AGG | + | chr5_2:15235049-15235068 | None:intergenic | 25.0% |
| !! | TTCTTTTCTCGTAAAAACAA+AGG | + | chr5_2:15235086-15235105 | None:intergenic | 25.0% |
| ! | CAATGAAACAAGTGTTAAAA+AGG | + | chr5_2:15235658-15235677 | None:intergenic | 25.0% |
| ! | ACATTCAGTTAATAAAATCG+TGG | + | chr5_2:15235866-15235885 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTGCTTTCATTC+TGG | + | chr5_2:15236083-15236102 | None:intergenic | 25.0% |
| !!! | TGTCTTTTTTGCTTACATTT+TGG | + | chr5_2:15236120-15236139 | None:intergenic | 25.0% |
| !! | AAGTTTTTCTTGGAAAAGAT+GGG | + | chr5_2:15236178-15236197 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTTGGAAAAGA+TGG | + | chr5_2:15236179-15236198 | None:intergenic | 25.0% |
| !!! | TTTTCATTGGCTATTGATTA+TGG | + | chr5_2:15236262-15236281 | None:intergenic | 25.0% |
| !! | GATGTAAAAGCAATTTTCAT+TGG | + | chr5_2:15236275-15236294 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCGCTTACAATTT+AGG | - | chr5_2:15236379-15236398 | Msa0759500:intron | 25.0% |
| !!! | AATTTCAAGAAAGCATTAAC+CGG | + | chr5_2:15236465-15236484 | None:intergenic | 25.0% |
| ! | TGAAATTGGTTATTGCAATT+AGG | - | chr5_2:15236617-15236636 | Msa0759500:intron | 25.0% |
| ! | AAAATTTATAGCACACGAAA+TGG | + | chr5_2:15237093-15237112 | None:intergenic | 25.0% |
| ! | ATACTGAGAATAATCTAACA+TGG | + | chr5_2:15237135-15237154 | None:intergenic | 25.0% |
| ! | ACAGTAAAAGGAATATAGAA+AGG | + | chr5_2:15237276-15237295 | None:intergenic | 25.0% |
| ! | TTACATAATAGTCTACAAAC+AGG | + | chr5_2:15237828-15237847 | None:intergenic | 25.0% |
| ! | TTATATTGCTCAAGAATGAA+GGG | + | chr5_2:15237856-15237875 | None:intergenic | 25.0% |
| ! | TTTATATTGCTCAAGAATGA+AGG | + | chr5_2:15237857-15237876 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTCTTGAATACAA+TGG | - | chr5_2:15238409-15238428 | Msa0759500:intron | 25.0% |
| !!! | CAATTTAGAGGTATTGTTTA+TGG | - | chr5_2:15238685-15238704 | Msa0759500:intron | 25.0% |
| ! | AGATGCCAATTTATATCTTA+GGG | - | chr5_2:15238717-15238736 | Msa0759500:five_prime_UTR | 25.0% |
| ! | TTCTACCCTAAGATATAAAT+TGG | + | chr5_2:15238725-15238744 | None:intergenic | 25.0% |
| ! | TATAAAATATGCATGATGGT+TGG | - | chr5_2:15238833-15238852 | Msa0759500:five_prime_UTR | 25.0% |
| ! | ATTTGGAGTAAAAGAACTGA+GGG | + | chr5_2:15230336-15230355 | None:intergenic | 30.0% |
| ! | TATTTGGAGTAAAAGAACTG+AGG | + | chr5_2:15230337-15230356 | None:intergenic | 30.0% |
| ! | TTCTTTTACTCCAAATAACG+CGG | - | chr5_2:15230340-15230359 | Msa0759500:three_prime_UTR | 30.0% |
| ! | ATACGCTGATAAGTTGAATT+TGG | + | chr5_2:15230474-15230493 | None:intergenic | 30.0% |
| TTATCAGCGTATCCAATTTA+GGG | - | chr5_2:15230482-15230501 | Msa0759500:three_prime_UTR | 30.0% | |
| !! | TCTCAAAACATTGATTTGCA+TGG | + | chr5_2:15230621-15230640 | None:intergenic | 30.0% |
| ATCTACTTATAGAACAACCA+TGG | + | chr5_2:15230692-15230711 | None:intergenic | 30.0% | |
| ! | TATAAGTAGATTACTGGCTA+GGG | - | chr5_2:15230701-15230720 | Msa0759500:CDS | 30.0% |
| AGGGTTTAGTATTAATAGCA+AGG | - | chr5_2:15230720-15230739 | Msa0759500:CDS | 30.0% | |
| ! | GGGAAAATTTTATCGAACAA+TGG | - | chr5_2:15230801-15230820 | Msa0759500:intron | 30.0% |
| AGTAAAGAGAATAGATCAGA+TGG | - | chr5_2:15231036-15231055 | Msa0759500:intron | 30.0% | |
| !!! | TGTGTTTCTTTTTTTTGGTG+TGG | - | chr5_2:15231242-15231261 | Msa0759500:intron | 30.0% |
| !! | ATATAATGAAGTTGGTGTAG+GGG | - | chr5_2:15231348-15231367 | Msa0759500:intron | 30.0% |
| TACAAAAGAAAACGATGAAG+TGG | - | chr5_2:15231411-15231430 | Msa0759500:intron | 30.0% | |
| ACAAAAGAAAACGATGAAGT+GGG | - | chr5_2:15231412-15231431 | Msa0759500:intron | 30.0% | |
| ! | TATTGATAATCTTGCTGGTT+TGG | - | chr5_2:15231549-15231568 | Msa0759500:intron | 30.0% |
| AGGTTCATTTGTATTAGAAG+AGG | + | chr5_2:15232106-15232125 | None:intergenic | 30.0% | |
| TCGTTATGATTTGACAGTAT+AGG | + | chr5_2:15232126-15232145 | None:intergenic | 30.0% | |
| ! | TCTAAAACATTCTTGACTTC+TGG | + | chr5_2:15232186-15232205 | None:intergenic | 30.0% |
| GATGCTGATCATTATTATGA+CGG | - | chr5_2:15232291-15232310 | Msa0759500:intron | 30.0% | |
| ! | TTATTATGACGGAAATGAGT+CGG | - | chr5_2:15232302-15232321 | Msa0759500:intron | 30.0% |
| ! | TTCAAACCTCCCAAATTTTA+TGG | - | chr5_2:15232393-15232412 | Msa0759500:CDS | 30.0% |
| AGCCATTCTCCATAAAATTT+GGG | + | chr5_2:15232405-15232424 | None:intergenic | 30.0% | |
| AAGCCATTCTCCATAAAATT+TGG | + | chr5_2:15232406-15232425 | None:intergenic | 30.0% | |
| !! | CAAATTTATGTAGCTGGTTT+TGG | - | chr5_2:15232632-15232651 | Msa0759500:intron | 30.0% |
| TTAGACGTGCAAGTAAAATA+TGG | - | chr5_2:15232806-15232825 | Msa0759500:intron | 30.0% | |
| !! | TATTTGTTTTCACAATGCAC+TGG | + | chr5_2:15232954-15232973 | None:intergenic | 30.0% |
| ! | GGTATTTGTTAATTACTGGA+AGG | - | chr5_2:15233055-15233074 | Msa0759500:intron | 30.0% |
| CTCCTAACAGTTTGTAAATT+TGG | - | chr5_2:15233160-15233179 | Msa0759500:intron | 30.0% | |
| AGCCAAATTTACAAACTGTT+AGG | + | chr5_2:15233165-15233184 | None:intergenic | 30.0% | |
| TCATGTCTTGATCTTGTTAA+TGG | - | chr5_2:15233467-15233486 | Msa0759500:intron | 30.0% | |
| ! | TATGGTCTTAACAATAAGTG+GGG | + | chr5_2:15233861-15233880 | None:intergenic | 30.0% |
| ! | GATATGGTCTTAACAATAAG+TGG | + | chr5_2:15233863-15233882 | None:intergenic | 30.0% |
| TGCAATGTTGTAAAAAAGAG+TGG | + | chr5_2:15233908-15233927 | None:intergenic | 30.0% | |
| ! | ATTGCAATGATAGTGTGTAT+TGG | - | chr5_2:15233922-15233941 | Msa0759500:intron | 30.0% |
| ! | AATGATAGTGTGTATTGGAA+AGG | - | chr5_2:15233927-15233946 | Msa0759500:intron | 30.0% |
| ! | GTGGTCACATTTTATGTAAA+TGG | - | chr5_2:15233966-15233985 | Msa0759500:intron | 30.0% |
| TAAATGGAAAAAGCTGTGAT+GGG | - | chr5_2:15233982-15234001 | Msa0759500:intron | 30.0% | |
| CGATGCATAATTTCTATCTT+TGG | - | chr5_2:15234442-15234461 | Msa0759500:intron | 30.0% | |
| ATATATAACATGTGCCCTAA+GGG | + | chr5_2:15234482-15234501 | None:intergenic | 30.0% | |
| TATATATAACATGTGCCCTA+AGG | + | chr5_2:15234483-15234502 | None:intergenic | 30.0% | |
| !!! | GTGTTTTAGTAAACTACAAG+TGG | + | chr5_2:15234578-15234597 | None:intergenic | 30.0% |
| !!! | ATGGACATAATTTTTTTCCC+TGG | - | chr5_2:15234655-15234674 | Msa0759500:intron | 30.0% |
| AAACAAAAAACCAATGACGT+TGG | + | chr5_2:15234764-15234783 | None:intergenic | 30.0% | |
| ! | GTAGAATTGATTTATGATGG+TGG | - | chr5_2:15234867-15234886 | Msa0759500:intron | 30.0% |
| ACAAAGGGGTTTAATATCAT+TGG | - | chr5_2:15234983-15235002 | Msa0759500:intron | 30.0% | |
| TTTCTCGTAAAAACAAAGGT+TGG | + | chr5_2:15235082-15235101 | None:intergenic | 30.0% | |
| TACGAGAAAAGAAAAACATG+AGG | - | chr5_2:15235093-15235112 | Msa0759500:intron | 30.0% | |
| GTTGCTAACAAAACAAATGT+CGG | + | chr5_2:15235125-15235144 | None:intergenic | 30.0% | |
| !!! | GACATTTGTTTTGTTAGCAA+CGG | - | chr5_2:15235124-15235143 | Msa0759500:intron | 30.0% |
| AAACAAGTGTTAAAAAGGTG+AGG | + | chr5_2:15235653-15235672 | None:intergenic | 30.0% | |
| ! | TACGAAAGGCATAACATAAA+AGG | - | chr5_2:15235714-15235733 | Msa0759500:intron | 30.0% |
| CTCATAATCAAGATTGTGTT+GGG | - | chr5_2:15235917-15235936 | Msa0759500:intron | 30.0% | |
| TCTGTCAAAATCATTTGTTC+TGG | - | chr5_2:15235996-15236015 | Msa0759500:intron | 30.0% | |
| ! | CTGGTTTAAGAGAATTTTGT+TGG | - | chr5_2:15236015-15236034 | Msa0759500:intron | 30.0% |
| ! | GCTATTGATTATGGAGAAAA+TGG | + | chr5_2:15236253-15236272 | None:intergenic | 30.0% |
| ! | CAAGTAGCATTCATATTTTC+CGG | - | chr5_2:15236443-15236462 | Msa0759500:intron | 30.0% |
| ! | ATTAACTGCATTCGAGTTTA+AGG | - | chr5_2:15236546-15236565 | Msa0759500:intron | 30.0% |
| ! | AGTTTAAGGCATCATTATCT+GGG | - | chr5_2:15236560-15236579 | Msa0759500:intron | 30.0% |
| ACCAATTTCAGATATTGTTC+AGG | + | chr5_2:15236607-15236626 | None:intergenic | 30.0% | |
| ! | TTCAATTGATGATTGTGTCT+AGG | - | chr5_2:15236809-15236828 | Msa0759500:intron | 30.0% |
| ! | TCAATTGATGATTGTGTCTA+GGG | - | chr5_2:15236810-15236829 | Msa0759500:intron | 30.0% |
| TCCACCAAACCTTTATAATA+GGG | + | chr5_2:15236929-15236948 | None:intergenic | 30.0% | |
| TTCCACCAAACCTTTATAAT+AGG | + | chr5_2:15236930-15236949 | None:intergenic | 30.0% | |
| !! | AGAAGCATTGAACAATTCTA+TGG | + | chr5_2:15236998-15237017 | None:intergenic | 30.0% |
| TTCAATGCTTCTGATTTCTT+AGG | - | chr5_2:15237006-15237025 | Msa0759500:CDS | 30.0% | |
| TAGGTACATCTGATTCAATA+AGG | + | chr5_2:15237169-15237188 | None:intergenic | 30.0% | |
| CTGCATTATCCATATAAGAT+GGG | + | chr5_2:15237202-15237221 | None:intergenic | 30.0% | |
| ACTGCATTATCCATATAAGA+TGG | + | chr5_2:15237203-15237222 | None:intergenic | 30.0% | |
| TACTTGTTTGTGTAGTTAGA+AGG | - | chr5_2:15237310-15237329 | Msa0759500:CDS | 30.0% | |
| ! | GAAATATATGCTTTAGTTCC+TGG | - | chr5_2:15237596-15237615 | Msa0759500:CDS | 30.0% |
| GGAAAATTCAGCTTATACAA+AGG | - | chr5_2:15237793-15237812 | Msa0759500:CDS | 30.0% | |
| TATATTGCTCAAGAATGAAG+GGG | + | chr5_2:15237855-15237874 | None:intergenic | 30.0% | |
| TTTCAGCATTGTAACTTATC+CGG | + | chr5_2:15238231-15238250 | None:intergenic | 30.0% | |
| AAGTTACAATGCTGAAATTG+AGG | - | chr5_2:15238234-15238253 | Msa0759500:intron | 30.0% | |
| GAATACAATGGCAAATTACT+CGG | - | chr5_2:15238421-15238440 | Msa0759500:intron | 30.0% | |
| ACTATTCTGACTGTTCAAAT+GGG | + | chr5_2:15238578-15238597 | None:intergenic | 30.0% | |
| !! | ACCTCTAAATTGTTGTTTCA+GGG | + | chr5_2:15238677-15238696 | None:intergenic | 30.0% |
| !! | TACCTCTAAATTGTTGTTTC+AGG | + | chr5_2:15238678-15238697 | None:intergenic | 30.0% |
| CAGATGCCAATTTATATCTT+AGG | - | chr5_2:15238716-15238735 | Msa0759500:intron | 30.0% | |
| CTTACTAGCTCATATTAACA+TGG | + | chr5_2:15238793-15238812 | None:intergenic | 30.0% | |
| CATGTTAATATGAGCTAGTA+AGG | - | chr5_2:15238791-15238810 | Msa0759500:five_prime_UTR | 30.0% | |
| ! | TTTGGAGTAAAAGAACTGAG+GGG | + | chr5_2:15230335-15230354 | None:intergenic | 35.0% |
| ACGCAAATTTCATGTTGAAG+CGG | + | chr5_2:15230403-15230422 | None:intergenic | 35.0% | |
| AACCTCAAACAGCACAATTT+AGG | - | chr5_2:15230442-15230461 | Msa0759500:three_prime_UTR | 35.0% | |
| ACCTCAAACAGCACAATTTA+GGG | - | chr5_2:15230443-15230462 | Msa0759500:three_prime_UTR | 35.0% | |
| CTTATCAGCGTATCCAATTT+AGG | - | chr5_2:15230481-15230500 | Msa0759500:three_prime_UTR | 35.0% | |
| CTGTGCAAATTGAGATTGAA+GGG | + | chr5_2:15230534-15230553 | None:intergenic | 35.0% | |
| ! | CTATAAGTAGATTACTGGCT+AGG | - | chr5_2:15230700-15230719 | Msa0759500:CDS | 35.0% |
| ! | AATTTTCCCTTCAACTTGAG+CGG | + | chr5_2:15230790-15230809 | None:intergenic | 35.0% |
| TTATCGAACAATGGTAAGAC+CGG | - | chr5_2:15230810-15230829 | Msa0759500:intron | 35.0% | |
| GCTTTGATGTGTAGTAAGAA+TGG | - | chr5_2:15230893-15230912 | Msa0759500:intron | 35.0% | |
| TGATGTGTAGTAAGAATGGA+CGG | - | chr5_2:15230897-15230916 | Msa0759500:CDS | 35.0% | |
| ! | TCTACCATCTTTTCTACTCT+AGG | + | chr5_2:15230966-15230985 | None:intergenic | 35.0% |
| AAAGAGAATAGATCAGATGG+AGG | - | chr5_2:15231039-15231058 | Msa0759500:intron | 35.0% | |
| AAGAGAATAGATCAGATGGA+GGG | - | chr5_2:15231040-15231059 | Msa0759500:intron | 35.0% | |
| GAGTCAAATCACTAGAGATA+GGG | - | chr5_2:15231063-15231082 | Msa0759500:intron | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | - | chr5_2:15231123-15231142 | Msa0759500:intron | 35.0% | |
| ! | TAATGAGTTGGAGAAAGACA+TGG | - | chr5_2:15231135-15231154 | Msa0759500:intron | 35.0% |
| ! | GAGAAAGACATGGTTTTTGT+TGG | - | chr5_2:15231145-15231164 | Msa0759500:intron | 35.0% |
| ! | AAGCCTTATCACAATAAGTG+GGG | + | chr5_2:15231204-15231223 | None:intergenic | 35.0% |
| ! | CAAGCCTTATCACAATAAGT+GGG | + | chr5_2:15231205-15231224 | None:intergenic | 35.0% |
| !!! | GTTTCTTTTTTTTGGTGTGG+TGG | - | chr5_2:15231245-15231264 | Msa0759500:intron | 35.0% |
| !! | TATAATGAAGTTGGTGTAGG+GGG | - | chr5_2:15231349-15231368 | Msa0759500:intron | 35.0% |
| TCATCATCATCTCCTAATTG+TGG | + | chr5_2:15231523-15231542 | None:intergenic | 35.0% | |
| TGTTAAAATTGGGAAGGAAG+AGG | - | chr5_2:15231660-15231679 | Msa0759500:CDS | 35.0% | |
| TGTTCAAGATACCCTTCATA+CGG | - | chr5_2:15231744-15231763 | Msa0759500:intron | 35.0% | |
| !! | TCATATTTTGGATACAGCTG+AGG | - | chr5_2:15231789-15231808 | Msa0759500:CDS | 35.0% |
| !! | CATATTTTGGATACAGCTGA+GGG | - | chr5_2:15231790-15231809 | Msa0759500:CDS | 35.0% |
| !!! | ACTACTCAGAGGAAGTTTTT+TGG | + | chr5_2:15231845-15231864 | None:intergenic | 35.0% |
| AAACTTCCTCTGAGTAGTAA+CGG | - | chr5_2:15231847-15231866 | Msa0759500:CDS | 35.0% | |
| ! | TGGTGATGTTGAAATGATAG+CGG | - | chr5_2:15231912-15231931 | Msa0759500:CDS | 35.0% |
| TCATTTGTATTAGAAGAGGC+AGG | + | chr5_2:15232102-15232121 | None:intergenic | 35.0% | |
| TTAGAAGTTGAAAGTAAGGG+TGG | - | chr5_2:15232201-15232220 | Msa0759500:CDS | 35.0% | |
| ! | TCTGGGTTTTCATTATCTAC+AGG | + | chr5_2:15232246-15232265 | None:intergenic | 35.0% |
| TCCAAGAAAAACATGTTCTG+CGG | + | chr5_2:15232273-15232292 | None:intergenic | 35.0% | |
| ! | TATTATGACGGAAATGAGTC+GGG | - | chr5_2:15232303-15232322 | Msa0759500:intron | 35.0% |
| AGGAGCTTGAAAACTTCTTT+AGG | - | chr5_2:15232355-15232374 | Msa0759500:CDS | 35.0% | |
| GGAGCTTGAAAACTTCTTTA+GGG | - | chr5_2:15232356-15232375 | Msa0759500:CDS | 35.0% | |
| ! | TTGAAAACTTCTTTAGGGAG+AGG | - | chr5_2:15232361-15232380 | Msa0759500:CDS | 35.0% |
| CATTCTCCATAAAATTTGGG+AGG | + | chr5_2:15232402-15232421 | None:intergenic | 35.0% | |
| ! | CTCCCAAATTTTATGGAGAA+TGG | - | chr5_2:15232400-15232419 | Msa0759500:CDS | 35.0% |
| CAACAGAGATAACTCACTTA+AGG | + | chr5_2:15232434-15232453 | None:intergenic | 35.0% | |
| !! | ATTCTAAAATGTTGTCGCTC+TGG | - | chr5_2:15232498-15232517 | Msa0759500:intron | 35.0% |
| !!! | CTCTGGACTAATGCTTTTTT+TGG | - | chr5_2:15232515-15232534 | Msa0759500:intron | 35.0% |
| !!! | TGGACTAATGCTTTTTTTGG+TGG | - | chr5_2:15232518-15232537 | Msa0759500:intron | 35.0% |
| !!! | GCTTTTTTTGGTGGAACATA+AGG | - | chr5_2:15232527-15232546 | Msa0759500:intron | 35.0% |
| TTTGGTGGAACATAAGGTTA+TGG | - | chr5_2:15232533-15232552 | Msa0759500:intron | 35.0% | |
| !!! | GGTCTTTTTTGTCACTCTTA+TGG | - | chr5_2:15232754-15232773 | Msa0759500:intron | 35.0% |
| ACCTTCTTACATACTGAAGT+GGG | + | chr5_2:15232912-15232931 | None:intergenic | 35.0% | |
| TACCTTCTTACATACTGAAG+TGG | + | chr5_2:15232913-15232932 | None:intergenic | 35.0% | |
| GACAATGGCATTCAAGATAA+TGG | - | chr5_2:15233034-15233053 | Msa0759500:intron | 35.0% | |
| !! | TTAGGAGCATCAAAATCAAC+TGG | + | chr5_2:15233147-15233166 | None:intergenic | 35.0% |
| CTTTAGATGAGCGAAATTTG+AGG | - | chr5_2:15233248-15233267 | Msa0759500:intron | 35.0% | |
| ! | ATTTGAGGCATTCTTTCTTG+AGG | - | chr5_2:15233263-15233282 | Msa0759500:intron | 35.0% |
| !! | AGCACTGATGATAGAACTTT+AGG | - | chr5_2:15233292-15233311 | Msa0759500:intron | 35.0% |
| TGCAAGTTAGTCCTTACTTT+GGG | + | chr5_2:15233444-15233463 | None:intergenic | 35.0% | |
| CAAGAATAACGGTTGTATGA+GGG | + | chr5_2:15233657-15233676 | None:intergenic | 35.0% | |
| ACAAGAATAACGGTTGTATG+AGG | + | chr5_2:15233658-15233677 | None:intergenic | 35.0% | |
| ACTGTGAAATTTGCATGCTT+GGG | - | chr5_2:15233729-15233748 | Msa0759500:intron | 35.0% | |
| !! | TAAAAGTATCATGTGTCCGT+TGG | + | chr5_2:15233771-15233790 | None:intergenic | 35.0% |
| CTAGCATTCGAAGTTAAGTT+AGG | + | chr5_2:15233819-15233838 | None:intergenic | 35.0% | |
| ! | ATGGTCTTAACAATAAGTGG+GGG | + | chr5_2:15233860-15233879 | None:intergenic | 35.0% |
| AGGTTGTTGAGAACAATTTG+TGG | - | chr5_2:15233947-15233966 | Msa0759500:intron | 35.0% | |
| GTAAATGGAAAAAGCTGTGA+TGG | - | chr5_2:15233981-15234000 | Msa0759500:intron | 35.0% | |
| ! | TGTGTTTCTTTACCCTTTTC+TGG | - | chr5_2:15234101-15234120 | Msa0759500:intron | 35.0% |
| CAAAAAGGATCTCCAGAAAA+GGG | + | chr5_2:15234116-15234135 | None:intergenic | 35.0% | |
| TCAAAAAGGATCTCCAGAAA+AGG | + | chr5_2:15234117-15234136 | None:intergenic | 35.0% | |
| !! | GAGATCCTTTTTGAGCTTTT+TGG | - | chr5_2:15234123-15234142 | Msa0759500:intron | 35.0% |
| CCTGCATAAGATAAAAACAG+AGG | + | chr5_2:15234186-15234205 | None:intergenic | 35.0% | |
| !!! | CCTCTGTTTTTATCTTATGC+AGG | - | chr5_2:15234183-15234202 | Msa0759500:intron | 35.0% |
| !! | AATCTTAACTTGTGCCCTTA+GGG | - | chr5_2:15234465-15234484 | Msa0759500:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr5_2:15235247-15235266 | None:intergenic | 35.0% |
| !!! | TTTTTTCCCTGGTTTTTCAG+CGG | - | chr5_2:15234666-15234685 | Msa0759500:intron | 35.0% |
| TAGTTCAGTCGACATTCAAT+GGG | + | chr5_2:15234903-15234922 | None:intergenic | 35.0% | |
| CGTCATTACACATGATTGTA+AGG | + | chr5_2:15234932-15234951 | None:intergenic | 35.0% | |
| TACAATCATGTGTAATGACG+TGG | - | chr5_2:15234932-15234951 | Msa0759500:intron | 35.0% | |
| ACAATCATGTGTAATGACGT+GGG | - | chr5_2:15234933-15234952 | Msa0759500:intron | 35.0% | |
| !!! | GCATTCAACCTGTTTTTATC+AGG | - | chr5_2:15235038-15235057 | Msa0759500:CDS | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr5_2:15235247-15235266 | Msa0759500:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr5_2:15235247-15235266 | Msa0759500:intron | 35.0% |
| ACAGAATTGCATCATTCTGA+AGG | + | chr5_2:15235627-15235646 | None:intergenic | 35.0% | |
| ! | GCTGTTTCAAATGTTACTCT+AGG | - | chr5_2:15235680-15235699 | Msa0759500:intron | 35.0% |
| ATGCCTTTCGTAATCAAGAA+GGG | + | chr5_2:15235706-15235725 | None:intergenic | 35.0% | |
| TATGCCTTTCGTAATCAAGA+AGG | + | chr5_2:15235707-15235726 | None:intergenic | 35.0% | |
| ! | GAAAGGCATAACATAAAAGG+CGG | - | chr5_2:15235717-15235736 | Msa0759500:intron | 35.0% |
| ! | ACCTGATTTTCAACATTCAC+AGG | + | chr5_2:15235777-15235796 | None:intergenic | 35.0% |
| GCTCATAATCAAGATTGTGT+TGG | - | chr5_2:15235916-15235935 | Msa0759500:intron | 35.0% | |
| !! | TTTTTGCTTTCATTCTGGGA+CGG | + | chr5_2:15236078-15236097 | None:intergenic | 35.0% |
| GGAAGAAGAGCAAAAATTCT+GGG | + | chr5_2:15236510-15236529 | None:intergenic | 35.0% | |
| ! | GAGTTTAAGGCATCATTATC+TGG | - | chr5_2:15236559-15236578 | Msa0759500:intron | 35.0% |
| ! | GCCTGAACAATATCTGAAAT+TGG | - | chr5_2:15236603-15236622 | Msa0759500:intron | 35.0% |
| ATTAGGTAAATTTGCACCCT+TGG | - | chr5_2:15236634-15236653 | Msa0759500:intron | 35.0% | |
| CTATTCATAGTCTATGCGAT+AGG | + | chr5_2:15236664-15236683 | None:intergenic | 35.0% | |
| !! | AGTTGGTGACCCTATTATAA+AGG | - | chr5_2:15236917-15236936 | Msa0759500:CDS | 35.0% |
| GTGACCCTATTATAAAGGTT+TGG | - | chr5_2:15236922-15236941 | Msa0759500:CDS | 35.0% | |
| ACCCTATTATAAAGGTTTGG+TGG | - | chr5_2:15236925-15236944 | Msa0759500:CDS | 35.0% | |
| TGCTTCTGATTTCTTAGGAT+AGG | - | chr5_2:15237011-15237030 | Msa0759500:CDS | 35.0% | |
| ATTTATAGCACACGAAATGG+AGG | + | chr5_2:15237090-15237109 | None:intergenic | 35.0% | |
| ATAATGCAGTCAAAGTAGCA+CGG | - | chr5_2:15237213-15237232 | Msa0759500:CDS | 35.0% | |
| CAATCACAACACACAGTAAA+AGG | + | chr5_2:15237288-15237307 | None:intergenic | 35.0% | |
| AATCTCTCATGGCTATAAGT+TGG | + | chr5_2:15237348-15237367 | None:intergenic | 35.0% | |
| CCAAAGTACAAAATCTCTCA+TGG | + | chr5_2:15237359-15237378 | None:intergenic | 35.0% | |
| ! | CCATGAGAGATTTTGTACTT+TGG | - | chr5_2:15237356-15237375 | Msa0759500:CDS | 35.0% |
| ! | TCAGCATAGGACATTTTGAA+GGG | + | chr5_2:15237985-15238004 | None:intergenic | 35.0% |
| TTCAAAATGTCCTATGCTGA+GGG | - | chr5_2:15237985-15238004 | Msa0759500:intron | 35.0% | |
| !! | ATCTATGCTCTGGCTTTAAA+TGG | - | chr5_2:15238152-15238171 | Msa0759500:intron | 35.0% |
| TGATCATCCCAATAATCCTT+GGG | - | chr5_2:15238334-15238353 | Msa0759500:intron | 35.0% | |
| ! | GGAAAACTCACCTTTTTGAA+AGG | + | chr5_2:15238368-15238387 | None:intergenic | 35.0% |
| TGATGAGGATCAATTCTTGA+GGG | + | chr5_2:15238510-15238529 | None:intergenic | 35.0% | |
| CACTATTCTGACTGTTCAAA+TGG | + | chr5_2:15238579-15238598 | None:intergenic | 35.0% | |
| CATTTGAACAGTCAGAATAG+TGG | - | chr5_2:15238577-15238596 | Msa0759500:intron | 35.0% | |
| ACCCTGAAACAACAATTTAG+AGG | - | chr5_2:15238673-15238692 | Msa0759500:intron | 35.0% | |
| TTCATTAGATTCCGTTAAGC+TGG | - | chr5_2:15238856-15238875 | Msa0759500:five_prime_UTR | 35.0% | |
| CATTGAGCACTTTATACTTG+TGG | + | chr5_2:15238882-15238901 | None:intergenic | 35.0% | |
| !! | TTGTGCTGTTTGAGGTTTGA+AGG | + | chr5_2:15230439-15230458 | None:intergenic | 40.0% |
| !! | ACCCTAAATTGTGCTGTTTG+AGG | + | chr5_2:15230447-15230466 | None:intergenic | 40.0% |
| GAGGAGAGAAAACCCTAAAT+TGG | + | chr5_2:15230497-15230516 | None:intergenic | 40.0% | |
| ! | GTTTTCTCTCCTCACACTTT+AGG | - | chr5_2:15230504-15230523 | Msa0759500:three_prime_UTR | 40.0% |
| CCTGTGCAAATTGAGATTGA+AGG | + | chr5_2:15230535-15230554 | None:intergenic | 40.0% | |
| CCTTCAATCTCAATTTGCAC+AGG | - | chr5_2:15230532-15230551 | Msa0759500:three_prime_UTR | 40.0% | |
| GATGTGTAGTAAGAATGGAC+GGG | - | chr5_2:15230898-15230917 | Msa0759500:CDS | 40.0% | |
| ATGACAACATTAGGGAGAGT+TGG | - | chr5_2:15230933-15230952 | Msa0759500:CDS | 40.0% | |
| TGACAACATTAGGGAGAGTT+GGG | - | chr5_2:15230934-15230953 | Msa0759500:CDS | 40.0% | |
| ATCGCCTAGAGTAGAAAAGA+TGG | - | chr5_2:15230959-15230978 | Msa0759500:CDS | 40.0% | |
| AGATGGTAGAAACGAGACTT+AGG | - | chr5_2:15230976-15230995 | Msa0759500:intron | 40.0% | |
| AGAAACGAGACTTAGGTGTT+TGG | - | chr5_2:15230983-15231002 | Msa0759500:intron | 40.0% | |
| GAAACGAGACTTAGGTGTTT+GGG | - | chr5_2:15230984-15231003 | Msa0759500:intron | 40.0% | |
| AGAGAATAGATCAGATGGAG+GGG | - | chr5_2:15231041-15231060 | Msa0759500:intron | 40.0% | |
| GGAGTCAAATCACTAGAGAT+AGG | - | chr5_2:15231062-15231081 | Msa0759500:intron | 40.0% | |
| CTTATCACAATAAGTGGGGT+CGG | + | chr5_2:15231200-15231219 | None:intergenic | 40.0% | |
| ! | CCAAGCCTTATCACAATAAG+TGG | + | chr5_2:15231206-15231225 | None:intergenic | 40.0% |
| CCACTTATTGTGATAAGGCT+TGG | - | chr5_2:15231203-15231222 | Msa0759500:intron | 40.0% | |
| CTTATTGTGATAAGGCTTGG+TGG | - | chr5_2:15231206-15231225 | Msa0759500:intron | 40.0% | |
| TCCTCTACATTAACATTCGC+CGG | + | chr5_2:15231448-15231467 | None:intergenic | 40.0% | |
| GCTTCAACTAGTCCACAATT+AGG | - | chr5_2:15231508-15231527 | Msa0759500:intron | 40.0% | |
| GATGCATCTTGAAGTTCAAC+CGG | - | chr5_2:15231591-15231610 | Msa0759500:intron | 40.0% | |
| GAAGTTTCCTCTACAGTAAC+CGG | + | chr5_2:15231613-15231632 | None:intergenic | 40.0% | |
| GGATGAAAATGTGAAACCCA+AGG | - | chr5_2:15231693-15231712 | Msa0759500:intron | 40.0% | |
| ! | AAACCCAAGGTTGTTTCAGA+AGG | - | chr5_2:15231706-15231725 | Msa0759500:intron | 40.0% |
| !! | ACACCTTCTGAAACAACCTT+GGG | + | chr5_2:15231712-15231731 | None:intergenic | 40.0% |
| !! | AACACCTTCTGAAACAACCT+TGG | + | chr5_2:15231713-15231732 | None:intergenic | 40.0% |
| AGATGCTTCTGATGTGAAGA+TGG | - | chr5_2:15231816-15231835 | Msa0759500:CDS | 40.0% | |
| ! | AGTAACGGTGTTGAGAATGA+TGG | - | chr5_2:15231862-15231881 | Msa0759500:CDS | 40.0% |
| !! | TGATGTTGAAATGATAGCGG+TGG | - | chr5_2:15231915-15231934 | Msa0759500:CDS | 40.0% |
| AGGTTCATTTGCATCAGAAG+AGG | + | chr5_2:15232043-15232062 | None:intergenic | 40.0% | |
| !! | TGGTTGATGGTTAAGCTTGT+CGG | - | chr5_2:15232699-15232718 | Msa0759500:intron | 40.0% |
| TCCCACTTCAGTATGTAAGA+AGG | - | chr5_2:15232908-15232927 | Msa0759500:intron | 40.0% | |
| !! | TTCACAATGCACTGGCATTT+TGG | + | chr5_2:15232946-15232965 | None:intergenic | 40.0% |
| AAAGATTCCTGGGTGATGAA+GGG | + | chr5_2:15233104-15233123 | None:intergenic | 40.0% | |
| AAAAGATTCCTGGGTGATGA+AGG | + | chr5_2:15233105-15233124 | None:intergenic | 40.0% | |
| TGGCTACTTAAGGTATAGTG+TGG | - | chr5_2:15233180-15233199 | Msa0759500:intron | 40.0% | |
| AGGTAACCTCATGTAAGTTG+TGG | - | chr5_2:15233392-15233411 | Msa0759500:intron | 40.0% | |
| TAACCTCATGTAAGTTGTGG+CGG | - | chr5_2:15233395-15233414 | Msa0759500:intron | 40.0% | |
| TCTTTCAAACCCCCAAAGTA+AGG | - | chr5_2:15233430-15233449 | Msa0759500:intron | 40.0% | |
| CAAGTTAGTCCTTACTTTGG+GGG | + | chr5_2:15233442-15233461 | None:intergenic | 40.0% | |
| GCAAGTTAGTCCTTACTTTG+GGG | + | chr5_2:15233443-15233462 | None:intergenic | 40.0% | |
| GTGCAAGTTAGTCCTTACTT+TGG | + | chr5_2:15233445-15233464 | None:intergenic | 40.0% | |
| ! | TAACTCTAAGAGCTAGCTTG+TGG | - | chr5_2:15233620-15233639 | Msa0759500:intron | 40.0% |
| GACTGTGAAATTTGCATGCT+TGG | - | chr5_2:15233728-15233747 | Msa0759500:intron | 40.0% | |
| ! | ACTTCGAATGCTAGCTCTTA+AGG | - | chr5_2:15233825-15233844 | Msa0759500:intron | 40.0% |
| ! | TTTCCGGGGATTTTATGAGA+AGG | - | chr5_2:15234229-15234248 | Msa0759500:intron | 40.0% |
| TCACCTTCTCATAAAATCCC+CGG | + | chr5_2:15234235-15234254 | None:intergenic | 40.0% | |
| AACCTTAACATGTGCCCTAA+GGG | + | chr5_2:15234351-15234370 | None:intergenic | 40.0% | |
| AAACCTTAACATGTGCCCTA+AGG | + | chr5_2:15234352-15234371 | None:intergenic | 40.0% | |
| !! | GAATCTTAACTTGTGCCCTT+AGG | - | chr5_2:15234464-15234483 | Msa0759500:intron | 40.0% |
| ACACCCACCTAAAAACACTA+AGG | - | chr5_2:15234532-15234551 | Msa0759500:intron | 40.0% | |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr5_2:15235251-15235270 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr5_2:15235250-15235269 | None:intergenic | 40.0% |
| CTTGTATGTTCCAACGTCAT+TGG | - | chr5_2:15234751-15234770 | Msa0759500:intron | 40.0% | |
| AGTTCAGTCGACATTCAATG+GGG | + | chr5_2:15234902-15234921 | None:intergenic | 40.0% | |
| GTAGTTCAGTCGACATTCAA+TGG | + | chr5_2:15234904-15234923 | None:intergenic | 40.0% | |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr5_2:15235250-15235269 | Msa0759500:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr5_2:15235251-15235270 | Msa0759500:intron | 40.0% |
| ACACCCACCTAAAAACACTA+AGG | + | chr5_2:15234532-15234551 | None:intergenic | 40.0% | |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr5_2:15235250-15235269 | Msa0759500:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr5_2:15235251-15235270 | Msa0759500:intron | 40.0% |
| ACACCCACCTAAAAACACTA+AGG | + | chr5_2:15234532-15234551 | None:intergenic | 40.0% | |
| ! | TTTTCAACATTCACAGGCTC+TGG | + | chr5_2:15235771-15235790 | None:intergenic | 40.0% |
| GCCTGTGAATGTTGAAAATC+AGG | - | chr5_2:15235773-15235792 | Msa0759500:intron | 40.0% | |
| !!! | TTTTGCTTTCATTCTGGGAC+GGG | + | chr5_2:15236077-15236096 | None:intergenic | 40.0% |
| CCTCTGTCCTAAATTGTAAG+CGG | + | chr5_2:15236389-15236408 | None:intergenic | 40.0% | |
| ! | CGCTTACAATTTAGGACAGA+GGG | - | chr5_2:15236387-15236406 | Msa0759500:intron | 40.0% |
| GGGAAGAAGAGCAAAAATTC+TGG | + | chr5_2:15236511-15236530 | None:intergenic | 40.0% | |
| CTATTCGTAGTCTATGCGAT+AGG | + | chr5_2:15236694-15236713 | None:intergenic | 40.0% | |
| GTATAGTGCTCACAGCAATA+AGG | + | chr5_2:15236767-15236786 | None:intergenic | 40.0% | |
| ! | TAAGATGGGCTCTTACGTTT+AGG | + | chr5_2:15237188-15237207 | None:intergenic | 40.0% |
| ACGTAAGAGCCCATCTTATA+TGG | - | chr5_2:15237190-15237209 | Msa0759500:CDS | 40.0% | |
| ! | TGTCTTAACTGTGGTCTTGA+CGG | + | chr5_2:15237245-15237264 | None:intergenic | 40.0% |
| TCAAGACCACAGTTAAGACA+CGG | - | chr5_2:15237245-15237264 | Msa0759500:CDS | 40.0% | |
| CATGCCTATGCTAACATATG+TGG | - | chr5_2:15237402-15237421 | Msa0759500:CDS | 40.0% | |
| ! | ACTTTTACCCAATCAGCAGA+AGG | + | chr5_2:15237463-15237482 | None:intergenic | 40.0% |
| ! | TGAATTTTGCACACCTCCAA+TGG | + | chr5_2:15237760-15237779 | None:intergenic | 40.0% |
| ! | TTGGAGGTGTGCAAAATTCA+TGG | - | chr5_2:15237760-15237779 | Msa0759500:CDS | 40.0% |
| ! | CTCAGCATAGGACATTTTGA+AGG | + | chr5_2:15237986-15238005 | None:intergenic | 40.0% |
| CTTCAAAATGTCCTATGCTG+AGG | - | chr5_2:15237984-15238003 | Msa0759500:intron | 40.0% | |
| !! | TCTAGTTCTACTCAATGTGC+TGG | + | chr5_2:15238035-15238054 | None:intergenic | 40.0% |
| ! | CCGCATCAACAAGTTTTCAA+GGG | + | chr5_2:15238059-15238078 | None:intergenic | 40.0% |
| !! | CCCTTGAAAACTTGTTGATG+CGG | - | chr5_2:15238056-15238075 | Msa0759500:intron | 40.0% |
| ! | ACCGCATCAACAAGTTTTCA+AGG | + | chr5_2:15238060-15238079 | None:intergenic | 40.0% |
| GTCCATATAGATCTATGCTC+TGG | - | chr5_2:15238142-15238161 | Msa0759500:intron | 40.0% | |
| AGCCAGAGCATAGATCTATA+TGG | + | chr5_2:15238147-15238166 | None:intergenic | 40.0% | |
| CCAAGAACTGATTAATCCGA+GGG | + | chr5_2:15238207-15238226 | None:intergenic | 40.0% | |
| TCCAAGAACTGATTAATCCG+AGG | + | chr5_2:15238208-15238227 | None:intergenic | 40.0% | |
| GGATTAATCAGTTCTTGGAC+CGG | - | chr5_2:15238209-15238228 | Msa0759500:intron | 40.0% | |
| !! | GATGCCTACTTTTCTAAACC+AGG | - | chr5_2:15238262-15238281 | Msa0759500:intron | 40.0% |
| CGTACCTGGTTTAGAAAAGT+AGG | + | chr5_2:15238269-15238288 | None:intergenic | 40.0% | |
| CAAGGATTATTGGGATGATC+AGG | + | chr5_2:15238335-15238354 | None:intergenic | 40.0% | |
| CTGATCATCCCAATAATCCT+TGG | - | chr5_2:15238333-15238352 | Msa0759500:intron | 40.0% | |
| GATCATCCCAATAATCCTTG+GGG | - | chr5_2:15238335-15238354 | Msa0759500:intron | 40.0% | |
| CTGATGAGGATCAATTCTTG+AGG | + | chr5_2:15238511-15238530 | None:intergenic | 40.0% | |
| TATACTTGTGGCCAGCTTAA+CGG | + | chr5_2:15238870-15238889 | None:intergenic | 40.0% | |
| !! | AAAGTGCCGCTCAAGTTGAA+GGG | - | chr5_2:15230781-15230800 | Msa0759500:intron | 45.0% |
| TTCTTTACCACCTAACACGC+CGG | + | chr5_2:15230832-15230851 | None:intergenic | 45.0% | |
| AGTTAAGCGTGTCAGAGATG+AGG | - | chr5_2:15230865-15230884 | Msa0759500:intron | 45.0% | |
| GACAACATTAGGGAGAGTTG+GGG | - | chr5_2:15230935-15230954 | Msa0759500:CDS | 45.0% | |
| GCATGTAGAGAGAAGACTTG+TGG | - | chr5_2:15231006-15231025 | Msa0759500:intron | 45.0% | |
| CGACCCCACTTATTGTGATA+AGG | - | chr5_2:15231198-15231217 | Msa0759500:intron | 45.0% | |
| AGAAAACGATGAAGTGGGTC+AGG | - | chr5_2:15231417-15231436 | Msa0759500:intron | 45.0% | |
| GAAAACGATGAAGTGGGTCA+GGG | - | chr5_2:15231418-15231437 | Msa0759500:intron | 45.0% | |
| TCCGGCGAATGTTAATGTAG+AGG | - | chr5_2:15231444-15231463 | Msa0759500:intron | 45.0% | |
| AGTTCAACCGGTTACTGTAG+AGG | - | chr5_2:15231603-15231622 | Msa0759500:intron | 45.0% | |
| CTCAACTGGAACCGTATGAA+GGG | + | chr5_2:15231758-15231777 | None:intergenic | 45.0% | |
| TCAACACCGTTACTACTCAG+AGG | + | chr5_2:15231856-15231875 | None:intergenic | 45.0% | |
| !! | TGTTGAAATGATAGCGGTGG+AGG | - | chr5_2:15231918-15231937 | Msa0759500:CDS | 45.0% |
| TCATTTGCATCAGAAGAGGC+AGG | + | chr5_2:15232039-15232058 | None:intergenic | 45.0% | |
| GTATTAGAAGAGGCAGGTTG+TGG | + | chr5_2:15232096-15232115 | None:intergenic | 45.0% | |
| !! | TTCTGGCCTTGTATCATCAG+GGG | + | chr5_2:15232169-15232188 | None:intergenic | 45.0% |
| !! | CTTCTGGCCTTGTATCATCA+GGG | + | chr5_2:15232170-15232189 | None:intergenic | 45.0% |
| !! | ACTTCTGGCCTTGTATCATC+AGG | + | chr5_2:15232171-15232190 | None:intergenic | 45.0% |
| ! | GCCGCAGAACATGTTTTTCT+TGG | - | chr5_2:15232269-15232288 | Msa0759500:intron | 45.0% |
| AAATGAGTCGGGAACAGAAG+AGG | - | chr5_2:15232314-15232333 | Msa0759500:intron | 45.0% | |
| ! | GGACCAAGCAGCTTTTATGA+AGG | - | chr5_2:15232335-15232354 | Msa0759500:CDS | 45.0% |
| GCTCCTTCATAAAAGCTGCT+TGG | + | chr5_2:15232341-15232360 | None:intergenic | 45.0% | |
| GGTTATGGAGAGCTGTAATG+AGG | - | chr5_2:15232548-15232567 | Msa0759500:intron | 45.0% | |
| ATGGAGAGCTGTAATGAGGT+TGG | - | chr5_2:15232552-15232571 | Msa0759500:intron | 45.0% | |
| TGGAGAGCTGTAATGAGGTT+GGG | - | chr5_2:15232553-15232572 | Msa0759500:intron | 45.0% | |
| TGGGTGATGAAGGGAATATG+GGG | + | chr5_2:15233095-15233114 | None:intergenic | 45.0% | |
| CTGGGTGATGAAGGGAATAT+GGG | + | chr5_2:15233096-15233115 | None:intergenic | 45.0% | |
| CTTAAGGTATAGTGTGGCTG+TGG | - | chr5_2:15233186-15233205 | Msa0759500:intron | 45.0% | |
| ATGTCCAGTCCTAGGCATAA+GGG | + | chr5_2:15233705-15233724 | None:intergenic | 45.0% | |
| TTTGCATGCTTGGGCATTTG+CGG | - | chr5_2:15233738-15233757 | Msa0759500:intron | 45.0% | |
| GAGTGGTAAGCGTTACACAT+TGG | + | chr5_2:15233891-15233910 | None:intergenic | 45.0% | |
| ATAAAATCCCCGGAAAGTCC+AGG | + | chr5_2:15234225-15234244 | None:intergenic | 45.0% | |
| ! | TTGTGCTAACTTGTGCCCTT+AGG | - | chr5_2:15234333-15234352 | Msa0759500:intron | 45.0% |
| ! | TGTGCTAACTTGTGCCCTTA+GGG | - | chr5_2:15234334-15234353 | Msa0759500:intron | 45.0% |
| GCATTTGCGAATTGCTTGAG+TGG | - | chr5_2:15235590-15235609 | Msa0759500:intron | 45.0% | |
| AGGCCCTTCTTGATTACGAA+AGG | - | chr5_2:15235700-15235719 | Msa0759500:intron | 45.0% | |
| !! | TTTGCTTTCATTCTGGGACG+GGG | + | chr5_2:15236076-15236095 | None:intergenic | 45.0% |
| ! | CCGCTTACAATTTAGGACAG+AGG | - | chr5_2:15236386-15236405 | Msa0759500:intron | 45.0% |
| !! | CTATGCGATAGGAGTACCAA+GGG | + | chr5_2:15236653-15236672 | None:intergenic | 45.0% |
| !! | TCTATGCGATAGGAGTACCA+AGG | + | chr5_2:15236654-15236673 | None:intergenic | 45.0% |
| CTATCGCATAGACTACGAAC+AGG | + | chr5_2:15236724-15236743 | None:intergenic | 45.0% | |
| CTGTTCGTAGTCTATGCGAT+AGG | - | chr5_2:15236722-15236741 | Msa0759500:intron | 45.0% | |
| ! | TGTGTCTAGGGTTTAGCATC+AGG | - | chr5_2:15236822-15236841 | Msa0759500:intron | 45.0% |
| GTTTAGCATCAGGTAGATCC+CGG | - | chr5_2:15236832-15236851 | Msa0759500:intron | 45.0% | |
| TCACAACGTCTTCTTGGCAA+TGG | - | chr5_2:15236891-15236910 | Msa0759500:CDS | 45.0% | |
| CTTCTTGGCAATGGTGAAGT+TGG | - | chr5_2:15236900-15236919 | Msa0759500:CDS | 45.0% | |
| !! | GCAGCTTAAGAGCATCAGTA+TGG | - | chr5_2:15237063-15237082 | Msa0759500:CDS | 45.0% |
| GAGTAACCGTGTCTTAACTG+TGG | + | chr5_2:15237254-15237273 | None:intergenic | 45.0% | |
| GCAGCCACATATGTTAGCAT+AGG | + | chr5_2:15237409-15237428 | None:intergenic | 45.0% | |
| TGCTAACATATGTGGCTGCT+AGG | - | chr5_2:15237410-15237429 | Msa0759500:CDS | 45.0% | |
| AACATATGTGGCTGCTAGGT+TGG | - | chr5_2:15237414-15237433 | Msa0759500:CDS | 45.0% | |
| ACATATGTGGCTGCTAGGTT+GGG | - | chr5_2:15237415-15237434 | Msa0759500:CDS | 45.0% | |
| ACATAGGACCTTCTGCTGAT+TGG | - | chr5_2:15237452-15237471 | Msa0759500:CDS | 45.0% | |
| ! | CATAGGACCTTCTGCTGATT+GGG | - | chr5_2:15237453-15237472 | Msa0759500:CDS | 45.0% |
| AATGGCAACTCTCATGGGAA+GGG | + | chr5_2:15237742-15237761 | None:intergenic | 45.0% | |
| GAGGTGTGCAAAATTCATGG+CGG | - | chr5_2:15237763-15237782 | Msa0759500:CDS | 45.0% | |
| ! | TGCAAAATTCATGGCGGAGT+GGG | - | chr5_2:15237769-15237788 | Msa0759500:CDS | 45.0% |
| ATGACAGATACCCTCAGCAT+AGG | + | chr5_2:15237998-15238017 | None:intergenic | 45.0% | |
| !! | TGCTGAGGGTATCTGTCATT+AGG | - | chr5_2:15237999-15238018 | Msa0759500:intron | 45.0% |
| TGTTCTCCTCTCAAGGTCTT+AGG | - | chr5_2:15238084-15238103 | Msa0759500:intron | 45.0% | |
| ATCGAACCTAAGACCTTGAG+AGG | + | chr5_2:15238093-15238112 | None:intergenic | 45.0% | |
| ATCCCCCTGATGCCAATTAT+TGG | - | chr5_2:15238111-15238130 | Msa0759500:intron | 45.0% | |
| CACCAATAATTGGCATCAGG+GGG | + | chr5_2:15238116-15238135 | None:intergenic | 45.0% | |
| CCACCAATAATTGGCATCAG+GGG | + | chr5_2:15238117-15238136 | None:intergenic | 45.0% | |
| CCCACCAATAATTGGCATCA+GGG | + | chr5_2:15238118-15238137 | None:intergenic | 45.0% | |
| CCCTGATGCCAATTATTGGT+GGG | - | chr5_2:15238115-15238134 | Msa0759500:intron | 45.0% | |
| GGACTTAGCCCACCAATAAT+TGG | + | chr5_2:15238126-15238145 | None:intergenic | 45.0% | |
| TTAAATGGCGCCCCTACAAA+TGG | - | chr5_2:15238167-15238186 | Msa0759500:intron | 45.0% | |
| CCCTCGGATTAATCAGTTCT+TGG | - | chr5_2:15238204-15238223 | Msa0759500:intron | 45.0% | |
| GTCACTCCCCAAGGATTATT+GGG | + | chr5_2:15238344-15238363 | None:intergenic | 45.0% | |
| TGTCACTCCCCAAGGATTAT+TGG | + | chr5_2:15238345-15238364 | None:intergenic | 45.0% | |
| GGGAGTGACACCTTTCAAAA+AGG | - | chr5_2:15238355-15238374 | Msa0759500:intron | 45.0% | |
| CTGACTGTTCAAATGGGACA+CGG | + | chr5_2:15238572-15238591 | None:intergenic | 45.0% | |
| !! | TAAAAAAAAAAACAAAAAAA+TGG | + | chr5_2:15231302-15231321 | None:intergenic | 5.0% |
| !!! | TTTTTTGTTAAATTAATAAA+TGG | - | chr5_2:15233121-15233140 | Msa0759500:intron | 5.0% |
| !!! | TTTATATCATTTTAAAATTT+TGG | - | chr5_2:15233787-15233806 | Msa0759500:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr5_2:15234498-15234517 | Msa0759500:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr5_2:15234498-15234517 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr5_2:15234498-15234517 | None:intergenic | 5.0% |
| !! | AAAATTAAAATATAAGAATT+TGG | + | chr5_2:15236341-15236360 | None:intergenic | 5.0% |
| GGAGTAAAAGAACTGAGGGG+AGG | + | chr5_2:15230332-15230351 | None:intergenic | 50.0% | |
| AAGGGCGATCCTAAAGTGTG+AGG | + | chr5_2:15230516-15230535 | None:intergenic | 50.0% | |
| !! | GAAAGTGCCGCTCAAGTTGA+AGG | - | chr5_2:15230780-15230799 | Msa0759500:intron | 50.0% |
| AATGGTAAGACCGGCGTGTT+AGG | - | chr5_2:15230819-15230838 | Msa0759500:intron | 50.0% | |
| CCTCAACTGGAACCGTATGA+AGG | + | chr5_2:15231759-15231778 | None:intergenic | 50.0% | |
| CCTTCATACGGTTCCAGTTG+AGG | - | chr5_2:15231756-15231775 | Msa0759500:intron | 50.0% | |
| TCATACGGTTCCAGTTGAGG+CGG | - | chr5_2:15231759-15231778 | Msa0759500:intron | 50.0% | |
| ! | GGCGGCTGATGCTCATATTT+TGG | - | chr5_2:15231777-15231796 | Msa0759500:CDS | 50.0% |
| !! | AATGATAGCGGTGGAGGTTG+AGG | - | chr5_2:15231924-15231943 | Msa0759500:CDS | 50.0% |
| GAAGCCTGAAGTCTGTGTAG+CGG | - | chr5_2:15231948-15231967 | Msa0759500:intron | 50.0% | |
| CGATCCTACTACACCACAAC+CGG | - | chr5_2:15232143-15232162 | Msa0759500:intron | 50.0% | |
| ACATGTTCTGCGGCGAATCT+GGG | + | chr5_2:15232263-15232282 | None:intergenic | 50.0% | |
| AACATGTTCTGCGGCGAATC+TGG | + | chr5_2:15232264-15232283 | None:intergenic | 50.0% | |
| ! | CTTCTTTAGGGAGAGGAGCA+TGG | - | chr5_2:15232368-15232387 | Msa0759500:CDS | 50.0% |
| AGAGCTGTAATGAGGTTGGG+AGG | - | chr5_2:15232556-15232575 | Msa0759500:intron | 50.0% | |
| TGATGAAGGGAATATGGGGC+AGG | + | chr5_2:15233091-15233110 | None:intergenic | 50.0% | |
| CCTGGGTGATGAAGGGAATA+TGG | + | chr5_2:15233097-15233116 | None:intergenic | 50.0% | |
| CCATATTCCCTTCATCACCC+AGG | - | chr5_2:15233094-15233113 | Msa0759500:intron | 50.0% | |
| ACTCCGCCACAACTTACATG+AGG | + | chr5_2:15233401-15233420 | None:intergenic | 50.0% | |
| ! | ATGTAAGTTGTGGCGGAGTG+TGG | - | chr5_2:15233402-15233421 | Msa0759500:intron | 50.0% |
| ! | TGTAAGTTGTGGCGGAGTGT+GGG | - | chr5_2:15233403-15233422 | Msa0759500:intron | 50.0% |
| ! | AAGAGCTAGCTTGTGGAGTG+AGG | - | chr5_2:15233627-15233646 | Msa0759500:intron | 50.0% |
| GATGTCCAGTCCTAGGCATA+AGG | + | chr5_2:15233706-15233725 | None:intergenic | 50.0% | |
| CAGTCTAGATGTCCAGTCCT+AGG | + | chr5_2:15233713-15233732 | None:intergenic | 50.0% | |
| TTGCATGCTTGGGCATTTGC+GGG | - | chr5_2:15233739-15233758 | Msa0759500:intron | 50.0% | |
| CATTTGCGGGTGTGAACCAA+CGG | - | chr5_2:15233752-15233771 | Msa0759500:intron | 50.0% | |
| CCACAGTTTCCTGGACTTTC+CGG | - | chr5_2:15234213-15234232 | Msa0759500:intron | 50.0% | |
| CACAGTTTCCTGGACTTTCC+GGG | - | chr5_2:15234214-15234233 | Msa0759500:intron | 50.0% | |
| ACAGTTTCCTGGACTTTCCG+GGG | - | chr5_2:15234215-15234234 | Msa0759500:intron | 50.0% | |
| TGCCCTTAGGGCACATGTTA+AGG | - | chr5_2:15234346-15234365 | Msa0759500:intron | 50.0% | |
| !! | GAAGTGCCGCTGAAAAACCA+GGG | + | chr5_2:15234675-15234694 | None:intergenic | 50.0% |
| ! | TCAACATTCACAGGCTCTGG+AGG | + | chr5_2:15235768-15235787 | None:intergenic | 50.0% |
| CTGTTCAGCAGCATATCTCC+GGG | + | chr5_2:15236853-15236872 | None:intergenic | 50.0% | |
| CCTGTTCAGCAGCATATCTC+CGG | + | chr5_2:15236854-15236873 | None:intergenic | 50.0% | |
| ATGCTGCTGAACAGGCTATG+CGG | - | chr5_2:15236859-15236878 | Msa0759500:CDS | 50.0% | |
| TGGCACTCACAACGTCTTCT+TGG | - | chr5_2:15236885-15236904 | Msa0759500:CDS | 50.0% | |
| GGAACAGCTGTGGTTGACAT+AGG | - | chr5_2:15237436-15237455 | Msa0759500:CDS | 50.0% | |
| ! | CTTTAGTTCCTGGCCTTCTG+CGG | - | chr5_2:15237606-15237625 | Msa0759500:CDS | 50.0% |
| ! | TTTAGTTCCTGGCCTTCTGC+GGG | - | chr5_2:15237607-15237626 | Msa0759500:CDS | 50.0% |
| ATGGCAACTCTCATGGGAAG+GGG | + | chr5_2:15237741-15237760 | None:intergenic | 50.0% | |
| CAATGGCAACTCTCATGGGA+AGG | + | chr5_2:15237743-15237762 | None:intergenic | 50.0% | |
| CTTCCCATGAGAGTTGCCAT+TGG | - | chr5_2:15237741-15237760 | Msa0759500:CDS | 50.0% | |
| CCTCCAATGGCAACTCTCAT+GGG | + | chr5_2:15237747-15237766 | None:intergenic | 50.0% | |
| ACCTCCAATGGCAACTCTCA+TGG | + | chr5_2:15237748-15237767 | None:intergenic | 50.0% | |
| ! | GTGCAAAATTCATGGCGGAG+TGG | - | chr5_2:15237768-15237787 | Msa0759500:CDS | 50.0% |
| ! | AAAATTCATGGCGGAGTGGG+TGG | - | chr5_2:15237772-15237791 | Msa0759500:CDS | 50.0% |
| ! | GGTGTTGTGTTCTCCTCTCA+AGG | - | chr5_2:15238077-15238096 | Msa0759500:intron | 50.0% |
| CCCCTGATGCCAATTATTGG+TGG | - | chr5_2:15238114-15238133 | Msa0759500:intron | 50.0% | |
| GCCCACCAATAATTGGCATC+AGG | + | chr5_2:15238119-15238138 | None:intergenic | 50.0% | |
| ATCCCACCGTCCATTTGTAG+GGG | + | chr5_2:15238180-15238199 | None:intergenic | 50.0% | |
| GATCCCACCGTCCATTTGTA+GGG | + | chr5_2:15238181-15238200 | None:intergenic | 50.0% | |
| CTACAAATGGACGGTGGGAT+CGG | - | chr5_2:15238180-15238199 | Msa0759500:intron | 50.0% | |
| GGTCTGATTGAACACGTACC+TGG | + | chr5_2:15238283-15238302 | None:intergenic | 50.0% | |
| TTATGACCAAACGTCCGGCT+GGG | + | chr5_2:15238304-15238323 | None:intergenic | 50.0% | |
| !! | TTGAAAGGTGTCACTCCCCA+AGG | + | chr5_2:15238353-15238372 | None:intergenic | 50.0% |
| TCCTCATCAGACATCAGCTG+TGG | - | chr5_2:15238521-15238540 | Msa0759500:intron | 50.0% | |
| ACCACAGCTGATGTCTGATG+AGG | + | chr5_2:15238525-15238544 | None:intergenic | 50.0% | |
| ! | TGAAGTGGGTCAGGGTGTTC+CGG | - | chr5_2:15231426-15231445 | Msa0759500:intron | 55.0% |
| ! | GAAGGAAGAGGTGCATGCTG+AGG | - | chr5_2:15231672-15231691 | Msa0759500:intron | 55.0% |
| ACAGCCGCTACACAGACTTC+AGG | + | chr5_2:15231955-15231974 | None:intergenic | 55.0% | |
| GAGGCAGGTTGTGGTGTAGT+AGG | + | chr5_2:15232024-15232043 | None:intergenic | 55.0% | |
| GCATCAGAAGAGGCAGGTTG+TGG | + | chr5_2:15232033-15232052 | None:intergenic | 55.0% | |
| GAGGCAGGTTGTGGTGTAGT+AGG | + | chr5_2:15232024-15232043 | None:intergenic | 55.0% | |
| AACCGGCCCCTGATGATACA+AGG | - | chr5_2:15232160-15232179 | Msa0759500:intron | 55.0% | |
| GAGGTTGGGAGGCTATGAGA+AGG | - | chr5_2:15232567-15232586 | Msa0759500:intron | 55.0% | |
| ACATCCCCTCCCTTATGCCT+AGG | - | chr5_2:15233693-15233712 | Msa0759500:intron | 55.0% | |
| CAGTCCTAGGCATAAGGGAG+GGG | + | chr5_2:15233700-15233719 | None:intergenic | 55.0% | |
| CCAGTCCTAGGCATAAGGGA+GGG | + | chr5_2:15233701-15233720 | None:intergenic | 55.0% | |
| TCCAGTCCTAGGCATAAGGG+AGG | + | chr5_2:15233702-15233721 | None:intergenic | 55.0% | |
| GGACATGCACCACAGTTTCC+TGG | - | chr5_2:15234204-15234223 | Msa0759500:intron | 55.0% | |
| CCGGAAAGTCCAGGAAACTG+TGG | + | chr5_2:15234216-15234235 | None:intergenic | 55.0% | |
| !! | GGAAGTGCCGCTGAAAAACC+AGG | + | chr5_2:15234676-15234695 | None:intergenic | 55.0% |
| CCGGAGATATGCTGCTGAAC+AGG | - | chr5_2:15236851-15236870 | Msa0759500:CDS | 55.0% | |
| TGCTGCTGAACAGGCTATGC+GGG | - | chr5_2:15236860-15236879 | Msa0759500:CDS | 55.0% | |
| ! | TGCTAGGTTGGGAACAGCTG+TGG | - | chr5_2:15237426-15237445 | Msa0759500:CDS | 55.0% |
| CCCATGAGAGTTGCCATTGG+AGG | - | chr5_2:15237744-15237763 | Msa0759500:CDS | 55.0% | |
| ATGGCGCCCCTACAAATGGA+CGG | - | chr5_2:15238171-15238190 | Msa0759500:intron | 55.0% | |
| CGATCCCACCGTCCATTTGT+AGG | + | chr5_2:15238182-15238201 | None:intergenic | 55.0% | |
| CGTGTTCAATCAGACCCAGC+CGG | - | chr5_2:15238287-15238306 | Msa0759500:intron | 55.0% | |
| CTTATGACCAAACGTCCGGC+TGG | + | chr5_2:15238305-15238324 | None:intergenic | 55.0% | |
| GCCGGACGTTTGGTCATAAG+CGG | - | chr5_2:15238305-15238324 | Msa0759500:intron | 55.0% | |
| GCCGCTTATGACCAAACGTC+CGG | + | chr5_2:15238309-15238328 | None:intergenic | 55.0% | |
| ! | TCAGCTGTGGTAACGCTGCA+TGG | - | chr5_2:15238534-15238553 | Msa0759500:intron | 55.0% |
| ! | GCGTCAAGCGCCGCGTTATT+TGG | + | chr5_2:15230353-15230372 | None:intergenic | 60.0% |
| GGTAAGACCGGCGTGTTAGG+TGG | - | chr5_2:15230822-15230841 | Msa0759500:intron | 60.0% | |
| TGAGCATCAGCCGCCTCAAC+TGG | + | chr5_2:15231772-15231791 | None:intergenic | 60.0% | |
| GTATCATCAGGGGCCGGTTG+TGG | + | chr5_2:15232159-15232178 | None:intergenic | 60.0% | |
| ! | GGCCTTGTATCATCAGGGGC+CGG | + | chr5_2:15232165-15232184 | None:intergenic | 60.0% |
| GAAGGGAATATGGGGCAGGC+TGG | + | chr5_2:15233087-15233106 | None:intergenic | 60.0% | |
| CCCTCCCTTATGCCTAGGAC+TGG | - | chr5_2:15233698-15233717 | Msa0759500:intron | 60.0% | |
| !! | GGCTCTGGAGGAGATGTGAC+AGG | + | chr5_2:15235756-15235775 | None:intergenic | 60.0% |
| GCTGCTGAACAGGCTATGCG+GGG | - | chr5_2:15236861-15236880 | Msa0759500:CDS | 60.0% | |
| CTGAACAGGCTATGCGGGGT+TGG | - | chr5_2:15236865-15236884 | Msa0759500:CDS | 60.0% | |
| GTAGTACCTCCTCCCGCAGA+AGG | + | chr5_2:15237622-15237641 | None:intergenic | 60.0% | |
| CGCCCCTACAAATGGACGGT+GGG | - | chr5_2:15238175-15238194 | Msa0759500:intron | 60.0% | |
| ATCAGACCCAGCCGGACGTT+TGG | - | chr5_2:15238295-15238314 | Msa0759500:intron | 60.0% | |
| GGGGCCGGTTGTGGTGTAGT+AGG | + | chr5_2:15232150-15232169 | None:intergenic | 65.0% | |
| ! | AGTTCCTGGCCTTCTGCGGG+AGG | - | chr5_2:15237610-15237629 | Msa0759500:CDS | 65.0% |
| GCGCCCCTACAAATGGACGG+TGG | - | chr5_2:15238174-15238193 | Msa0759500:intron | 65.0% | |
| ! | TCCTGGCCTTCTGCGGGAGG+AGG | - | chr5_2:15237613-15237632 | Msa0759500:CDS | 70.0% |
| ACCTCCTCCCGCAGAAGGCC+AGG | + | chr5_2:15237617-15237636 | None:intergenic | 70.0% | |
| GGACGGTGGGATCGGACCCT+CGG | - | chr5_2:15238188-15238207 | Msa0759500:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 15230309 | 15238961 | 15230309 | ID=Msa0759500;Name=Msa0759500 |
| chr5_2 | mRNA | 15230309 | 15238961 | 15230309 | ID=Msa0759500-mRNA-1;Parent=Msa0759500;Name=Msa0759500-mRNA-1;_AED=0.11;_eAED=0.11;_QI=280|0.90|0.83|1|0.90|0.83|12|365|616 |
| chr5_2 | exon | 15230309 | 15230775 | 15230309 | ID=Msa0759500-mRNA-1:exon:6909;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15230894 | 15230986 | 15230894 | ID=Msa0759500-mRNA-1:exon:6908;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15231636 | 15231686 | 15231636 | ID=Msa0759500-mRNA-1:exon:6907;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15231772 | 15231945 | 15231772 | ID=Msa0759500-mRNA-1:exon:6906;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15232186 | 15232242 | 15232186 | ID=Msa0759500-mRNA-1:exon:6905;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15232332 | 15232439 | 15232332 | ID=Msa0759500-mRNA-1:exon:6904;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15233476 | 15233568 | 15233476 | ID=Msa0759500-mRNA-1:exon:6903;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15235020 | 15235065 | 15235020 | ID=Msa0759500-mRNA-1:exon:6902;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15235824 | 15235876 | 15235824 | ID=Msa0759500-mRNA-1:exon:6901;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15236682 | 15236721 | 15236682 | ID=Msa0759500-mRNA-1:exon:6900;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15236834 | 15237902 | 15236834 | ID=Msa0759500-mRNA-1:exon:6899;Parent=Msa0759500-mRNA-1 |
| chr5_2 | exon | 15238717 | 15238961 | 15238717 | ID=Msa0759500-mRNA-1:exon:6898;Parent=Msa0759500-mRNA-1 |
| chr5_2 | five_prime_UTR | 15238717 | 15238961 | 15238717 | ID=Msa0759500-mRNA-1:five_prime_utr;Parent=Msa0759500-mRNA-1 |
| chr5_2 | five_prime_UTR | 15237868 | 15237902 | 15237868 | ID=Msa0759500-mRNA-1:five_prime_utr;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15236834 | 15237867 | 15236834 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15236682 | 15236721 | 15236682 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15235824 | 15235876 | 15235824 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15235020 | 15235065 | 15235020 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15233476 | 15233568 | 15233476 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15232332 | 15232439 | 15232332 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15232186 | 15232242 | 15232186 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15231772 | 15231945 | 15231772 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15231636 | 15231686 | 15231636 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15230894 | 15230986 | 15230894 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | CDS | 15230674 | 15230775 | 15230674 | ID=Msa0759500-mRNA-1:cds;Parent=Msa0759500-mRNA-1 |
| chr5_2 | three_prime_UTR | 15230309 | 15230673 | 15230309 | ID=Msa0759500-mRNA-1:three_prime_utr;Parent=Msa0759500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
