AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760190 MtrunA17_Chr5g0408851 99.077 650 6 0 1 650 1 650 0.0 1356
Msa0760190 MtrunA17_Chr7g0247631 51.347 631 283 7 41 650 73 700 0.0 625
Msa0760190 MtrunA17_Chr4g0023601 45.038 393 212 3 217 607 12 402 9.05e-128 386
Msa0760190 MtrunA17_Chr2g0323051 41.609 435 245 4 217 644 85 517 1.15e-120 371
Msa0760190 MtrunA17_Chr5g0399991 38.013 463 269 8 189 644 59 510 2.95e-103 324
Msa0760190 MtrunA17_Chr4g0055281 36.832 505 303 10 139 637 4 498 1.15e-102 323
Msa0760190 MtrunA17_Chr5g0400001 38.789 446 255 8 205 644 75 508 3.65e-102 322
Msa0760190 MtrunA17_Chr6g0481031 39.487 390 229 6 218 602 106 493 1.07e-96 308
Msa0760190 MtrunA17_Chr8g0388651 35.872 407 251 7 219 617 80 484 1.85e-72 243
Msa0760190 MtrunA17_Chr2g0286431 35.372 376 231 7 218 588 83 451 1.65e-71 241
Msa0760190 MtrunA17_Chr1g0154651 51.351 74 35 1 50 122 14 87 2.41e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760190 AT5G45300.3 69.779 589 176 2 60 646 110 698 0.0 860
Msa0760190 AT5G45300.1 69.779 589 176 2 60 646 96 684 0.0 859
Msa0760190 AT5G45300.2 69.779 589 174 3 60 646 96 682 0.0 855
Msa0760190 AT2G45880.1 50.799 626 289 9 41 649 59 682 0.0 635
Msa0760190 AT4G00490.1 55.556 459 199 3 196 650 73 530 0.0 555
Msa0760190 AT2G32290.1 44.091 440 238 5 211 644 71 508 3.29e-124 380
Msa0760190 AT4G15210.2 43.511 393 217 4 217 606 13 403 3.64e-117 357
Msa0760190 AT4G15210.1 42.543 409 225 5 217 617 13 419 9.16e-117 358
Msa0760190 AT4G17090.1 40.698 430 245 8 218 642 86 510 9.58e-108 337
Msa0760190 AT4G15210.3 42.663 368 202 4 257 617 1 366 1.05e-104 325
Msa0760190 AT4G15210.4 42.663 368 202 4 257 617 1 366 1.05e-104 325
Msa0760190 AT3G23920.1 39.007 423 245 8 218 629 106 526 1.17e-100 319
Msa0760190 AT5G55700.1 33.667 499 301 12 134 617 21 504 6.99e-81 266
Msa0760190 AT5G18670.1 32.767 412 260 8 218 626 87 484 2.04e-63 219
Msa0760190 AT5G55700.2 37.942 311 180 6 318 617 33 341 9.59e-61 207

Find 192 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGGTATTGGTGAGTTTC+AGG 0.176787 5_2:+16567394 Msa0760190:CDS
GGCTTCGCCGCCACGGCGGC+GGG 0.187111 5_2:+16564107 Msa0760190:CDS
AACAACACCATCAATATTTA+AGG 0.189592 5_2:-16566136 None:intergenic
CCGGTGATCAGGATCATTTC+TGG 0.208369 5_2:-16570102 None:intergenic
CAATATTTAAGGACTTAATA+TGG 0.231011 5_2:-16566125 None:intergenic
CTTATGCAAGATATTCATTC+TGG 0.237659 5_2:+16565807 Msa0760190:CDS
ACCCAGACCACACATATTTC+TGG 0.247785 5_2:-16566197 None:intergenic
TTCCCTCCCACAATGGGTTT+TGG 0.258466 5_2:+16566836 Msa0760190:CDS
CGGCTTCGCCGCCACGGCGG+CGG 0.267102 5_2:+16564106 Msa0760190:CDS
GGCGAAGCCGCGTAGGCGGC+GGG 0.280396 5_2:-16564093 None:intergenic
AGGCGGCGGGGTTGTGGTTG+GGG 0.281050 5_2:-16564080 None:intergenic
TCAGCAACCATCTTTGCTTC+AGG 0.288355 5_2:+16570145 Msa0760190:CDS
CCAATGACTCGTTAGCTTCC+TGG 0.291869 5_2:-16569782 None:intergenic
AATATGTGTGGTCTGGGTAT+AGG 0.294983 5_2:+16566202 Msa0760190:CDS
GGTGATTATGACAACTATTA+TGG 0.299107 5_2:+16567677 Msa0760190:CDS
TCAAATTCTGAAGGTTGTTA+TGG 0.309425 5_2:+16566770 Msa0760190:intron
TAGGCGGCGGGGTTGTGGTT+GGG 0.320831 5_2:-16564081 None:intergenic
GAAATTGGTCTGGGAGCATC+TGG 0.323125 5_2:+16567326 Msa0760190:CDS
CGGCGAAGCCGCGTAGGCGG+CGG 0.325121 5_2:-16564094 None:intergenic
GTAAATTACACCCCACAAAA+TGG 0.336732 5_2:-16570374 None:intergenic
GAACGAGGGTTGATCACTTC+TGG 0.343467 5_2:+16570017 Msa0760190:CDS
ATTAAGTCCTTAAATATTGA+TGG 0.349118 5_2:+16566129 Msa0760190:CDS
TTTGAGAACTTGTTCGGTTA+AGG 0.350304 5_2:+16565239 Msa0760190:CDS
AAATGTTTGCCTGTCAGAAT+TGG 0.351900 5_2:+16570169 Msa0760190:CDS
AAGCAGTCAGTTGAATTGAT+TGG 0.355108 5_2:-16565381 None:intergenic
CCGCGTAGGCGGCGGGGTTG+TGG 0.358579 5_2:-16564086 None:intergenic
TGCAGGTTCCTGCCGTATAC+TGG 0.362202 5_2:+16569613 Msa0760190:intron
AGATGACAGGGAATCTTTAA+TGG 0.362543 5_2:+16570326 Msa0760190:CDS
ATATGTGTGGTCTGGGTATA+GGG 0.362560 5_2:+16566203 Msa0760190:CDS
GAAATACTGAATGCCTATCT+TGG 0.365514 5_2:+16566910 Msa0760190:CDS
CGGAGCTGTGGTCGCTTTGT+GGG 0.367932 5_2:-16564049 None:intergenic
AAATTATGTCGAGGTTGTTA+TGG 0.369192 5_2:-16570521 None:intergenic
TGTTGTTGTGGATTGTTGGT+GGG 0.375591 5_2:+16566152 Msa0760190:CDS
GCTGCTCTCGCGCGTGAAGC+TGG 0.375664 5_2:+16564293 Msa0760190:CDS
CTGCATGGTCTACTAAAGTC+TGG 0.377028 5_2:-16567724 None:intergenic
TCGGAGCTGTGGTCGCTTTG+TGG 0.379351 5_2:-16564050 None:intergenic
TTGTAGTGCCCAGCATTATC+AGG 0.379757 5_2:-16567617 None:intergenic
TGACTGCTTGGAGGCTGATC+AGG 0.381765 5_2:+16565395 Msa0760190:CDS
ATGGTGTTGTTGTGGATTGT+TGG 0.383484 5_2:+16566148 Msa0760190:CDS
AGCTCCTGCCTAATGCCTTC+AGG 0.384829 5_2:-16566099 None:intergenic
ACCTGCCAACTCAGGCCATC+TGG 0.386436 5_2:-16569810 None:intergenic
AAAAGAGTGACCGCGTAGTT+TGG 0.391155 5_2:-16567582 None:intergenic
GTTCGTTCAGAAATGCATTC+AGG 0.391246 5_2:-16563982 None:intergenic
TGGATACTCTCCTGTGTTTG+AGG 0.393796 5_2:+16569701 Msa0760190:CDS
TTCTTTAATTATTAAGATAG+AGG 0.394296 5_2:+16570597 Msa0760190:three_prime_UTR
TTGATATGATGAGAAGCTTT+CGG 0.394412 5_2:+16567258 Msa0760190:CDS
TCCCAGAAATATGTGTGGTC+TGG 0.396705 5_2:+16566195 Msa0760190:CDS
ATGATTGATGCTGTAGAAAT+TGG 0.397538 5_2:+16567311 Msa0760190:CDS
CTCTCGCGCGTGAAGCTGGT+TGG 0.397545 5_2:+16564297 Msa0760190:CDS
AGCAGTCAGTTGAATTGATT+GGG 0.398837 5_2:-16565380 None:intergenic
TGTTGGTGGGGCATTGTTGA+AGG 0.399748 5_2:+16566165 Msa0760190:CDS
GTGTTGTTGTGGATTGTTGG+TGG 0.402184 5_2:+16566151 Msa0760190:CDS
CGAGTTCTCAAAGGAAGAAC+TGG 0.402924 5_2:+16566948 Msa0760190:CDS
AATGAAAAGTGCCGGTGATC+AGG 0.403522 5_2:-16570113 None:intergenic
CGGTGATCAGGATCATTTCT+GGG 0.406853 5_2:-16570101 None:intergenic
TCCTAAGCAGACAAATTTCA+TGG 0.413620 5_2:-16569745 None:intergenic
CAGCAACCATCTTTGCTTCA+GGG 0.418330 5_2:+16570146 Msa0760190:CDS
ATATCACAATCCCACAAATC+AGG 0.419172 5_2:+16569677 Msa0760190:CDS
AAATACTGAATGCCTATCTT+GGG 0.426849 5_2:+16566911 Msa0760190:CDS
CTTTGTCAATTCCCCAAGAT+AGG 0.429608 5_2:-16566923 None:intergenic
TGATGGATCCTGAAGGCATT+AGG 0.431606 5_2:+16566091 Msa0760190:CDS
GTTGTTGTGGATTGTTGGTG+GGG 0.431988 5_2:+16566153 Msa0760190:CDS
TTACCTTGTTGTGGCTACAT+AGG 0.433218 5_2:+16570393 Msa0760190:three_prime_UTR
TTTATGTAAACAGGAACATA+TGG 0.433574 5_2:-16565858 None:intergenic
CCCAGACCACACATATTTCT+GGG 0.437815 5_2:-16566196 None:intergenic
GGTGGGGCATTGTTGAAGGC+TGG 0.439216 5_2:+16566169 Msa0760190:CDS
GGGACAAATTCCACCGGAAA+AGG 0.442955 5_2:+16564128 Msa0760190:CDS
TGCCTTCAGGATCCATCAAC+TGG 0.446486 5_2:-16566086 None:intergenic
ACATTTCCCTGAAGCAAAGA+TGG 0.448478 5_2:-16570152 None:intergenic
GTAGGCGGCGGGGTTGTGGT+TGG 0.449462 5_2:-16564082 None:intergenic
AAAAGAGCGAGAGAAAGAAA+AGG 0.450160 5_2:+16564154 Msa0760190:CDS
TACAGGTATTAAACTCAGCT+TGG 0.451086 5_2:+16569994 Msa0760190:intron
CCCAGAAATATGTGTGGTCT+GGG 0.451457 5_2:+16566196 Msa0760190:CDS
CAATCATACCTTCTGCAAAC+AGG 0.452909 5_2:-16567295 None:intergenic
AACTCTATGCCACATGAGAC+TGG 0.453839 5_2:+16567638 Msa0760190:CDS
CCGTGGCGGCGAAGCCGCGT+AGG 0.454530 5_2:-16564100 None:intergenic
AAGTCTATTGAAGTTGAAGT+TGG 0.454770 5_2:+16570679 Msa0760190:three_prime_UTR
AATCAATTCAACTGACTGCT+TGG 0.457237 5_2:+16565383 Msa0760190:CDS
TTGTGGTTGGGGTAAGTAAT+CGG 0.458554 5_2:-16564069 None:intergenic
TGGTACTTTGAGAACTTGTT+CGG 0.461516 5_2:+16565233 Msa0760190:CDS
AGTCTTGTACCACCAGTATA+CGG 0.462042 5_2:-16569625 None:intergenic
AGGATGGGGTGGAGGTATCC+TGG 0.464484 5_2:+16567377 Msa0760190:CDS
ATCCTTGCAGGTGAGATGAC+AGG 0.465289 5_2:+16570313 Msa0760190:intron
GCTTCGCCGCCACGGCGGCG+GGG 0.466898 5_2:+16564108 Msa0760190:CDS
CCAGGAAGCTAACGAGTCAT+TGG 0.468008 5_2:+16569782 Msa0760190:CDS
CCACCCCATCCTTTCTGAAA+AGG 0.469410 5_2:-16567366 None:intergenic
AGAATTCAAGCTGAATATAC+AGG 0.471133 5_2:+16566245 Msa0760190:CDS
AAAAGGAACGAACGAAGCTA+AGG 0.476064 5_2:+16564171 Msa0760190:CDS
ATTGATTTCCCTCCCACAAT+GGG 0.477212 5_2:+16566830 Msa0760190:CDS
TACCTTGTTGTGGCTACATA+GGG 0.478784 5_2:+16570394 Msa0760190:three_prime_UTR
CCTACGCGGCTTCGCCGCCA+CGG 0.482897 5_2:+16564100 Msa0760190:CDS
ACCATGAAATTTGTCTGCTT+AGG 0.486759 5_2:+16569744 Msa0760190:CDS
TTATGCAAGATATTCATTCT+GGG 0.487754 5_2:+16565808 Msa0760190:CDS
TGCAATGTCTTCTGTAACAA+CGG 0.488157 5_2:+16570456 Msa0760190:three_prime_UTR
GTATGGTAATTTCCCTCTCC+CGG 0.489619 5_2:+16564244 Msa0760190:CDS
TTAGCTGGACTCCGTCAGTA+TGG 0.494728 5_2:+16564227 Msa0760190:CDS
TGGCGGCGAAGCCGCGTAGG+CGG 0.499488 5_2:-16564097 None:intergenic
CCAATATCCAAAACCCATTG+TGG 0.501815 5_2:-16566843 None:intergenic
GCTAGAGGACCTGATAATGC+TGG 0.501946 5_2:+16567608 Msa0760190:CDS
TGATGCTGTAGAAATTGGTC+TGG 0.501988 5_2:+16567316 Msa0760190:CDS
ACAGGTATTAAACTCAGCTT+GGG 0.509640 5_2:+16569995 Msa0760190:intron
ATATCAGCACGCGCCGGGAG+AGG 0.510910 5_2:-16564257 None:intergenic
TCGTTAGCTTCCTGGTTGGA+AGG 0.511214 5_2:-16569774 None:intergenic
TTTCAGAAAGGATGGGGTGG+AGG 0.511254 5_2:+16567369 Msa0760190:CDS
CAATATCCAAAACCCATTGT+GGG 0.513279 5_2:-16566842 None:intergenic
CAATTCAACTGACTGCTTGG+AGG 0.518795 5_2:+16565386 Msa0760190:CDS
TTCTTCATCAAATGCATGCA+TGG 0.520174 5_2:+16570194 Msa0760190:CDS
GGGTGGAGGTATCCTGGTAT+TGG 0.524209 5_2:+16567383 Msa0760190:CDS
GGGTGTAATTTACCTTGTTG+TGG 0.525378 5_2:+16570384 Msa0760190:three_prime_UTR
CATTGATTTCCCTCCCACAA+TGG 0.525805 5_2:+16566829 Msa0760190:CDS
TCAGTTGAAAGTCAACCATC+TGG 0.528161 5_2:+16565210 Msa0760190:CDS
GAGTATCCATCCTGATTTGT+GGG 0.533867 5_2:-16569687 None:intergenic
GGTTGGATTGTTGATGCTGA+TGG 0.534130 5_2:+16564314 Msa0760190:CDS
CAAAGGAAGAACTGGAATTG+AGG 0.535058 5_2:+16566956 Msa0760190:CDS
AAAACAGAATCAATAGATGC+AGG 0.538608 5_2:-16565312 None:intergenic
TCCAGATGGCCTGAGTTGGC+AGG 0.543608 5_2:+16569809 Msa0760190:CDS
CATTCATATCAGCACGCGCC+GGG 0.544842 5_2:-16564262 None:intergenic
AAATATTGATGGTGTTGTTG+TGG 0.545768 5_2:+16566140 Msa0760190:CDS
GTGTCTCCCTCCTTCCAACA+TGG 0.546110 5_2:+16564352 Msa0760190:CDS
GTAGAAAGGGACTCAAAGAA+TGG 0.546302 5_2:+16565339 Msa0760190:CDS
GTTATGGCATTTCATGAATG+TGG 0.548376 5_2:+16566786 Msa0760190:CDS
CTAAAATTACCTGCCAACTC+AGG 0.548595 5_2:-16569818 None:intergenic
TGTTGGAAGGAGGGAGACAC+TGG 0.550508 5_2:-16564349 None:intergenic
ACGCGGCTTCGCCGCCACGG+CGG 0.551565 5_2:+16564103 Msa0760190:CDS
ATCACGAGTAGAATGTTAGC+TGG 0.553331 5_2:+16564212 Msa0760190:CDS
GGATCCTGAAGGCATTAGGC+AGG 0.553951 5_2:+16566095 Msa0760190:CDS
CCCATCCTTTCTGAAAAGGA+AGG 0.556761 5_2:-16567362 None:intergenic
TATCAGCACGCGCCGGGAGA+GGG 0.558304 5_2:-16564256 None:intergenic
AAACAAAGAATGAAAAGTGC+CGG 0.559419 5_2:-16570121 None:intergenic
TTTGATGACCTGTTTGCAGA+AGG 0.560533 5_2:+16567287 Msa0760190:CDS
GTCAATTCTGCTGCATGACT+AGG 0.563214 5_2:-16569648 None:intergenic
AGAGTATCCATCCTGATTTG+TGG 0.565198 5_2:-16569688 None:intergenic
TCCTTGCAGGTGAGATGACA+GGG 0.565996 5_2:+16570314 Msa0760190:intron
TGCATGGTCTACTAAAGTCT+GGG 0.566186 5_2:-16567723 None:intergenic
CATGCAGCAGAATTGACTGC+AGG 0.566474 5_2:+16569654 Msa0760190:CDS
TCCAGGGATCATTTGCCGCA+AGG 0.566747 5_2:+16565187 Msa0760190:intron
TGAAGAAATCCAATTCTGAC+AGG 0.567129 5_2:-16570178 None:intergenic
ATTTGTCCCCGCCGCCGTGG+CGG 0.567720 5_2:-16564114 None:intergenic
CCACAACCCCGCCGCCTACG+CGG 0.569008 5_2:+16564086 Msa0760190:CDS
GCGAAGCCGCGTAGGCGGCG+GGG 0.569975 5_2:-16564092 None:intergenic
AACACTAGAGAATCAGTCAC+CGG 0.572564 5_2:+16565263 Msa0760190:CDS
ATGGACGCTTCTTCTTACAT+TGG 0.572612 5_2:+16567696 Msa0760190:CDS
TTGATCCAGATGGCCTGAGT+TGG 0.574969 5_2:+16569805 Msa0760190:CDS
CTAGAGGACCTGATAATGCT+GGG 0.581369 5_2:+16567609 Msa0760190:CDS
AGAAAAGCAACCAACCATGT+TGG 0.581861 5_2:-16564366 None:intergenic
AACCAACCATGTTGGAAGGA+GGG 0.583778 5_2:-16564358 None:intergenic
ACCTGAAACTCACCAATACC+AGG 0.584300 5_2:-16567395 None:intergenic
CAACCAACCATGTTGGAAGG+AGG 0.585531 5_2:-16564359 None:intergenic
CACAATCCCACAAATCAGGA+TGG 0.585925 5_2:+16569681 Msa0760190:CDS
TTAAACTCAGCTTGGGAACG+AGG 0.585944 5_2:+16570002 Msa0760190:CDS
GACAAAGAGCGAGTTCTCAA+AGG 0.589070 5_2:+16566939 Msa0760190:CDS
TTGACTTTCAACTGACCTTG+CGG 0.590564 5_2:-16565202 None:intergenic
AAAGGAACGAACGAAGCTAA+GGG 0.591350 5_2:+16564172 Msa0760190:CDS
TGGCATTTCATGAATGTGGA+GGG 0.594149 5_2:+16566790 Msa0760190:CDS
GAGACAAAACATTATCTGCA+TGG 0.594938 5_2:-16567739 None:intergenic
AGGATTTAATCCTTCCAACC+AGG 0.595036 5_2:+16569764 Msa0760190:CDS
ATCCAAAACCCATTGTGGGA+GGG 0.597274 5_2:-16566838 None:intergenic
AATTGGTCTGGGAGCATCTG+GGG 0.601511 5_2:+16567328 Msa0760190:CDS
TTGTACCACCAGTATACGGC+AGG 0.604078 5_2:-16569621 None:intergenic
CCAGAAATGATCCTGATCAC+CGG 0.607555 5_2:+16570102 Msa0760190:CDS
GGAATTTGTCCCCGCCGCCG+TGG 0.607736 5_2:-16564117 None:intergenic
AGGAGGGAGACACTGGCGAT+AGG 0.608162 5_2:-16564342 None:intergenic
AAGCAACCAACCATGTTGGA+AGG 0.608592 5_2:-16564362 None:intergenic
TATCCAAAACCCATTGTGGG+AGG 0.608960 5_2:-16566839 None:intergenic
GTACGAGAGATTGATTGAGA+TGG 0.613489 5_2:+16570073 Msa0760190:CDS
TAAACTCAGCTTGGGAACGA+GGG 0.616065 5_2:+16570003 Msa0760190:CDS
CATTCATCAACTCTAAGTCC+CGG 0.620550 5_2:-16565282 None:intergenic
TATGCAAGATATTCATTCTG+GGG 0.623010 5_2:+16565809 Msa0760190:CDS
CCATCCTTTCTGAAAAGGAA+GGG 0.623214 5_2:-16567361 None:intergenic
GAGTCATTGGTTGATCCAGA+TGG 0.623664 5_2:+16569795 Msa0760190:CDS
AAATTGGTCTGGGAGCATCT+GGG 0.623821 5_2:+16567327 Msa0760190:CDS
AAAGTTGTAAAATTATGTCG+AGG 0.624306 5_2:-16570530 None:intergenic
GGGGTAAGTAATCGGAGCTG+TGG 0.625072 5_2:-16564061 None:intergenic
TGCCAGTTGATGGATCCTGA+AGG 0.625854 5_2:+16566084 Msa0760190:CDS
TGACTCGTTAGCTTCCTGGT+TGG 0.628203 5_2:-16569778 None:intergenic
GCGGCGGGGACAAATTCCAC+CGG 0.628450 5_2:+16564122 Msa0760190:CDS
GATGCTGTAGAAATTGGTCT+GGG 0.630924 5_2:+16567317 Msa0760190:CDS
TTGTGGGTCGAGATCTTGTG+TGG 0.631123 5_2:-16564033 None:intergenic
GTCCCTATGTAGCCACAACA+AGG 0.633615 5_2:-16570396 None:intergenic
CGCAGAGCTGCCAAACTACG+CGG 0.638467 5_2:+16567572 Msa0760190:CDS
AATACTGAATGCCTATCTTG+GGG 0.642808 5_2:+16566912 Msa0760190:CDS
TCATTCATATCAGCACGCGC+CGG 0.643548 5_2:-16564263 None:intergenic
GGATATTGGAAAAGACAACC+AGG 0.649948 5_2:+16566857 Msa0760190:CDS
CAAAAGAATCCAGTCTCATG+TGG 0.650881 5_2:-16567647 None:intergenic
GAGGGAAATTACCATACTGA+CGG 0.656418 5_2:-16564238 None:intergenic
ACACTAGAGAATCAGTCACC+GGG 0.668842 5_2:+16565264 Msa0760190:CDS
ATGGCATTTCATGAATGTGG+AGG 0.669763 5_2:+16566789 Msa0760190:CDS
GTTCTCAAAGTACCACCAGA+TGG 0.678737 5_2:-16565225 None:intergenic
TTCTACTCGTGATAGCTCGA+CGG 0.680739 5_2:-16564202 None:intergenic
AGGTTCCTGCCGTATACTGG+TGG 0.683068 5_2:+16569616 Msa0760190:intron
GTTGAAAGTCAACCATCTGG+TGG 0.685021 5_2:+16565213 Msa0760190:CDS
GGAACTCCCAGAAATATGTG+TGG 0.702347 5_2:+16566190 Msa0760190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGTTTCAAATTATATAT+AGG + chr5_2:16564461-16564480 Msa0760190:intron 10.0%
!!! AAGAATTATTTTGTATTATT+AGG - chr5_2:16568628-16568647 None:intergenic 10.0%
!!! TTTTTTATTTTGGTCTTAAT+CGG + chr5_2:16564916-16564935 Msa0760190:intron 15.0%
!! CAATAAATTACAAATTTAGA+TGG - chr5_2:16565781-16565800 None:intergenic 15.0%
!! GTAATAGAAAATAAATGATT+TGG - chr5_2:16566404-16566423 None:intergenic 15.0%
!! AATAGTTTAAGAACTTTATA+GGG - chr5_2:16566472-16566491 None:intergenic 15.0%
!! TAATAGTTTAAGAACTTTAT+AGG - chr5_2:16566473-16566492 None:intergenic 15.0%
!! TTATATTCTATATGTTTGTA+AGG + chr5_2:16567485-16567504 Msa0760190:intron 15.0%
!!! AAAAATTTGGTTTCAAAAAA+AGG + chr5_2:16568017-16568036 Msa0760190:intron 15.0%
!! AAGAATAATAAACTTGAAAA+AGG + chr5_2:16568333-16568352 Msa0760190:intron 15.0%
!!! TAATATCTTATTTACTTTTG+TGG + chr5_2:16568429-16568448 Msa0760190:intron 15.0%
!!! TAGTTAGTAATAATTTGTTT+CGG + chr5_2:16568924-16568943 Msa0760190:intron 15.0%
!! AAATAAAATAAATACCTGTT+TGG - chr5_2:16569348-16569367 None:intergenic 15.0%
!!! TAAAAATAGTTTCTAAAAAC+TGG + chr5_2:16569374-16569393 Msa0760190:intron 15.0%
!! TTCTTTAATTATTAAGATAG+AGG + chr5_2:16570597-16570616 Msa0760190:three_prime_UTR 15.0%
!!! AGCTTATTTTTAAAAACTCT+CGG - chr5_2:16564766-16564785 None:intergenic 20.0%
!!! TTTTAAAAATAAGCTGAACA+CGG + chr5_2:16564771-16564790 Msa0760190:intron 20.0%
!!! TTGCTTAGAGTTTTTTATTT+TGG + chr5_2:16564906-16564925 Msa0760190:intron 20.0%
!!! TTTTTATTTTGGTCTTAATC+GGG + chr5_2:16564917-16564936 Msa0760190:intron 20.0%
!! AAATCAATATGTTGAAATGT+TGG + chr5_2:16565099-16565118 Msa0760190:intron 20.0%
!! AATCAATATGTTGAAATGTT+GGG + chr5_2:16565100-16565119 Msa0760190:intron 20.0%
!! TTAGTGTTTATGTTTGATTA+AGG + chr5_2:16565156-16565175 Msa0760190:intron 20.0%
!!! ATTCTGTTTTAATTGTAGAA+AGG + chr5_2:16565325-16565344 Msa0760190:CDS 20.0%
!!! TTCTGTTTTAATTGTAGAAA+GGG + chr5_2:16565326-16565345 Msa0760190:CDS 20.0%
!! AGTTTATGTTGATATGATAT+CGG + chr5_2:16565528-16565547 Msa0760190:intron 20.0%
!! GTGTGTTTAAATTTATAATG+TGG + chr5_2:16565731-16565750 Msa0760190:intron 20.0%
!! GAAAAAAAAATTGTACTTAC+AGG + chr5_2:16565954-16565973 Msa0760190:intron 20.0%
!! CAATATTTAAGGACTTAATA+TGG - chr5_2:16566128-16566147 None:intergenic 20.0%
!! ATTAAGTCCTTAAATATTGA+TGG + chr5_2:16566129-16566148 Msa0760190:CDS 20.0%
!!! AGATAAATTTTCCATTTTGA+AGG - chr5_2:16566318-16566337 None:intergenic 20.0%
!! TATGATACATGATGATTAAT+AGG + chr5_2:16566373-16566392 Msa0760190:intron 20.0%
!!! CTTTAAAATATGTTTTGAAG+AGG + chr5_2:16566711-16566730 Msa0760190:intron 20.0%
!!! ATTTGTTTCTTGTTTGTATA+TGG + chr5_2:16567110-16567129 Msa0760190:intron 20.0%
!!! TATATCAATTTTTCATGTTG+TGG + chr5_2:16567816-16567835 Msa0760190:intron 20.0%
!! ATTAGCATTTATTCTATGAA+TGG - chr5_2:16567990-16568009 None:intergenic 20.0%
!! ATTCATAGAATAAATGCTAA+TGG + chr5_2:16567989-16568008 Msa0760190:intron 20.0%
!!! AAAGTTTTAACGATACAATT+TGG + chr5_2:16568541-16568560 Msa0760190:intron 20.0%
!!! TTCTTTTTAATATCTTAACG+TGG + chr5_2:16568881-16568900 Msa0760190:intron 20.0%
!!! TTTCTGTTAGAATTTCTTTT+TGG + chr5_2:16568972-16568991 Msa0760190:intron 20.0%
!!! TTCTGTTAGAATTTCTTTTT+GGG + chr5_2:16568973-16568992 Msa0760190:intron 20.0%
!!! TGAAAATTCTAAAACTTGTT+TGG + chr5_2:16569109-16569128 Msa0760190:intron 20.0%
!!! ATGTGGTATATTTTCATTAA+TGG + chr5_2:16569260-16569279 Msa0760190:intron 20.0%
!! TAAAAATAAGATTACCAAAC+AGG + chr5_2:16569331-16569350 Msa0760190:intron 20.0%
!! AGAGTTTATGATTAAACTTA+GGG - chr5_2:16569449-16569468 None:intergenic 20.0%
!! AAGAGTTTATGATTAAACTT+AGG - chr5_2:16569450-16569469 None:intergenic 20.0%
!!! AGTATTAACATTTTAACGTT+AGG + chr5_2:16569486-16569505 Msa0760190:intron 20.0%
!!! TTTGAAATAACTTGTATGAT+GGG + chr5_2:16569861-16569880 Msa0760190:intron 20.0%
!!! ATTACATATTTTGATCAACT+TGG + chr5_2:16569930-16569949 Msa0760190:intron 20.0%
!! TTGTTAAAAAGTAAGATTTG+CGG - chr5_2:16570352-16570371 None:intergenic 20.0%
!!! TGATGATTATTTCTGATTGA+AGG + chr5_2:16564406-16564425 Msa0760190:intron 25.0%
! AATTATTAGTATTGTCGTGT+AGG + chr5_2:16564549-16564568 Msa0760190:intron 25.0%
!! TTAAGTTGCTTATTCAAACA+GGG - chr5_2:16564630-16564649 None:intergenic 25.0%
!! ATTAAGTTGCTTATTCAAAC+AGG - chr5_2:16564631-16564650 None:intergenic 25.0%
! TCTAAGCAATAACTAACTAA+GGG - chr5_2:16564895-16564914 None:intergenic 25.0%
!!! TTTTATTTTGGTCTTAATCG+GGG + chr5_2:16564918-16564937 Msa0760190:intron 25.0%
!!! TAACGCATTTTAGTTAAGTT+CGG - chr5_2:16565019-16565038 None:intergenic 25.0%
!!! TGATTAAGGTTTTATTATCC+AGG + chr5_2:16565170-16565189 Msa0760190:intron 25.0%
!!! GATTAAGGTTTTATTATCCA+GGG + chr5_2:16565171-16565190 Msa0760190:intron 25.0%
! TAAATTTAAACACACCACTT+GGG - chr5_2:16565726-16565745 None:intergenic 25.0%
! ATAAATTTAAACACACCACT+TGG - chr5_2:16565727-16565746 None:intergenic 25.0%
! TTATGCAAGATATTCATTCT+GGG + chr5_2:16565808-16565827 Msa0760190:CDS 25.0%
! TTTATGTAAACAGGAACATA+TGG - chr5_2:16565861-16565880 None:intergenic 25.0%
! ATAAATATGAGACACTTACT+GGG - chr5_2:16565887-16565906 None:intergenic 25.0%
! AATAAATATGAGACACTTAC+TGG - chr5_2:16565888-16565907 None:intergenic 25.0%
!!! TTTTCTAGAACTTTTTACAC+AGG - chr5_2:16565939-16565958 None:intergenic 25.0%
!!! TAAAATTAGCCTTTTATTGC+AGG + chr5_2:16566041-16566060 Msa0760190:intron 25.0%
! AACAACACCATCAATATTTA+AGG - chr5_2:16566139-16566158 None:intergenic 25.0%
!!! AAATTTTCCATTTTGAAGGA+TGG - chr5_2:16566314-16566333 None:intergenic 25.0%
! TAAACTATTACACTACATGA+AGG + chr5_2:16566483-16566502 Msa0760190:intron 25.0%
! GGTATGTAAACATAAATAAC+AGG - chr5_2:16567049-16567068 None:intergenic 25.0%
!!! TAATGCAACTGTTTTGAAAT+GGG - chr5_2:16567437-16567456 None:intergenic 25.0%
!!! ATAATGCAACTGTTTTGAAA+TGG - chr5_2:16567438-16567457 None:intergenic 25.0%
! CTTATAACTGTGACTAAATT+TGG + chr5_2:16567845-16567864 Msa0760190:intron 25.0%
! AGTAAATGCCTCATATTAAA+GGG - chr5_2:16567944-16567963 None:intergenic 25.0%
! TAGTAAATGCCTCATATTAA+AGG - chr5_2:16567945-16567964 None:intergenic 25.0%
! GCTAATGGTGTATAAAAATT+TGG + chr5_2:16568004-16568023 Msa0760190:intron 25.0%
! TCAAAAATCAATAGAAGCTA+TGG + chr5_2:16568152-16568171 Msa0760190:intron 25.0%
!! AACTATAATTACGACTCTTT+TGG - chr5_2:16568222-16568241 None:intergenic 25.0%
!! AAAGGAAGAGAAACTTTTAT+GGG - chr5_2:16568484-16568503 None:intergenic 25.0%
!! TAAAGGAAGAGAAACTTTTA+TGG - chr5_2:16568485-16568504 None:intergenic 25.0%
! ATTTAGGGGTAAAAACTTAA+AGG - chr5_2:16568502-16568521 None:intergenic 25.0%
! TAAAATGGGATGAAAAATCA+AGG - chr5_2:16568579-16568598 None:intergenic 25.0%
!! TGATTTTTCATCCCATTTTA+AGG + chr5_2:16568579-16568598 Msa0760190:intron 25.0%
!! GATTTTTCATCCCATTTTAA+GGG + chr5_2:16568580-16568599 Msa0760190:intron 25.0%
!! ATTTTTCATCCCATTTTAAG+GGG + chr5_2:16568581-16568600 Msa0760190:intron 25.0%
! TACAAAATAATTCTTGCTTG+TGG + chr5_2:16568633-16568652 Msa0760190:intron 25.0%
! GCATAATACAATAACTTTGA+CGG - chr5_2:16568686-16568705 None:intergenic 25.0%
! TAGTTTAATGTAACAACCAA+GGG - chr5_2:16568850-16568869 None:intergenic 25.0%
! TTAGTTTAATGTAACAACCA+AGG - chr5_2:16568851-16568870 None:intergenic 25.0%
!! TCTGTTAGAATTTCTTTTTG+GGG + chr5_2:16568974-16568993 Msa0760190:intron 25.0%
! TTTAACTATTCAATGCAGAA+AGG + chr5_2:16569028-16569047 Msa0760190:intron 25.0%
! TTTCAAAAACAGAATCAAAC+AGG - chr5_2:16569066-16569085 None:intergenic 25.0%
!!! GGAAACAGTTTTTAAAAAGT+AGG - chr5_2:16569138-16569157 None:intergenic 25.0%
!! GCAAAACATAAAACAGTTTT+GGG - chr5_2:16569159-16569178 None:intergenic 25.0%
!! AGCAAAACATAAAACAGTTT+TGG - chr5_2:16569160-16569179 None:intergenic 25.0%
! AGTTTCCAAAACAAAAAACA+CGG + chr5_2:16569235-16569254 Msa0760190:intron 25.0%
!!! ATGGCATTTTAGTAAATAAG+TGG + chr5_2:16569279-16569298 Msa0760190:intron 25.0%
! ATTCATTAAGTTTAGAGACA+AGG - chr5_2:16569587-16569606 None:intergenic 25.0%
!!! CTTTGAAATAACTTGTATGA+TGG + chr5_2:16569860-16569879 Msa0760190:intron 25.0%
! ATAGATCAAAGTGAATTCTA+AGG - chr5_2:16570229-16570248 None:intergenic 25.0%
!!! GCAAATCTTACTTTTTAACA+AGG + chr5_2:16570351-16570370 Msa0760190:three_prime_UTR 25.0%
! AAAGTTGTAAAATTATGTCG+AGG - chr5_2:16570533-16570552 None:intergenic 25.0%
!!! CGATCCTTTTTTTGATAATA+AGG + chr5_2:16570569-16570588 Msa0760190:three_prime_UTR 25.0%
! CGAACCTTATTATCAAAAAA+AGG - chr5_2:16570576-16570595 None:intergenic 25.0%
CTCTAAGCAATAACTAACTA+AGG - chr5_2:16564896-16564915 None:intergenic 30.0%
!! CTTATTTTCGAATCAATCAC+TGG - chr5_2:16564948-16564967 None:intergenic 30.0%
CTGAACTACTTGATTTAGTT+GGG + chr5_2:16565049-16565068 Msa0760190:intron 30.0%
TGAACTACTTGATTTAGTTG+GGG + chr5_2:16565050-16565069 Msa0760190:intron 30.0%
AATATGTTGAAATGTTGGGT+TGG + chr5_2:16565104-16565123 Msa0760190:intron 30.0%
ATATGTTGAAATGTTGGGTT+GGG + chr5_2:16565105-16565124 Msa0760190:intron 30.0%
AAAACAGAATCAATAGATGC+AGG - chr5_2:16565315-16565334 None:intergenic 30.0%
CATAAACTAGAAAAACAGTG+AGG - chr5_2:16565516-16565535 None:intergenic 30.0%
! GGTGTGTATTGATATACTAT+TGG + chr5_2:16565597-16565616 Msa0760190:intron 30.0%
TGAAATAAGCTTCATGCAAT+TGG - chr5_2:16565683-16565702 None:intergenic 30.0%
CTTATGCAAGATATTCATTC+TGG + chr5_2:16565807-16565826 Msa0760190:CDS 30.0%
TATGCAAGATATTCATTCTG+GGG + chr5_2:16565809-16565828 Msa0760190:CDS 30.0%
!! TTTGACTTGTATTTGATCAC+AGG + chr5_2:16566013-16566032 Msa0760190:intron 30.0%
!! TTGACTTGTATTTGATCACA+GGG + chr5_2:16566014-16566033 Msa0760190:intron 30.0%
! TAACAAATTTTGCCAGTTGA+TGG + chr5_2:16566074-16566093 Msa0760190:CDS 30.0%
!! AAATATTGATGGTGTTGTTG+TGG + chr5_2:16566140-16566159 Msa0760190:CDS 30.0%
AGAATTCAAGCTGAATATAC+AGG + chr5_2:16566245-16566264 Msa0760190:CDS 30.0%
!! TATTACAAGAGTGTCATTTC+TGG + chr5_2:16566418-16566437 Msa0760190:intron 30.0%
AGTTTAAGAACTTTATAGGG+AGG - chr5_2:16566469-16566488 None:intergenic 30.0%
TAAAGATGCTTTCCAATTAG+AGG - chr5_2:16566696-16566715 None:intergenic 30.0%
! TCAAATTCTGAAGGTTGTTA+TGG + chr5_2:16566770-16566789 Msa0760190:intron 30.0%
! ATATTTTTCACAGATCGTGA+AGG + chr5_2:16566882-16566901 Msa0760190:CDS 30.0%
AAATACTGAATGCCTATCTT+GGG + chr5_2:16566911-16566930 Msa0760190:CDS 30.0%
TATCTGCATTTCATCTGAAA+GGG + chr5_2:16567080-16567099 Msa0760190:intron 30.0%
TTGATATGATGAGAAGCTTT+CGG + chr5_2:16567258-16567277 Msa0760190:CDS 30.0%
ATGATTGATGCTGTAGAAAT+TGG + chr5_2:16567311-16567330 Msa0760190:CDS 30.0%
!!! AATGCAACTGTTTTGAAATG+GGG - chr5_2:16567436-16567455 None:intergenic 30.0%
GGTGATTATGACAACTATTA+TGG + chr5_2:16567677-16567696 Msa0760190:CDS 30.0%
GGGAACAAAAATTATTGTCA+AGG + chr5_2:16567781-16567800 Msa0760190:CDS 30.0%
! TATTGTCAAGGTAGTTTTTC+TGG + chr5_2:16567793-16567812 Msa0760190:intron 30.0%
AGGATAGTAAACAGAAAAAG+AGG + chr5_2:16568037-16568056 Msa0760190:intron 30.0%
TAAATGTCCAAGTTGTATGA+TGG + chr5_2:16568177-16568196 Msa0760190:intron 30.0%
GCAAGATATTCAAATCTTGT+TGG + chr5_2:16568249-16568268 Msa0760190:intron 30.0%
! TATTCAAATCTTGTTGGTGA+AGG + chr5_2:16568255-16568274 Msa0760190:intron 30.0%
TACAACCTTAGTTTCACATA+TGG + chr5_2:16568359-16568378 Msa0760190:intron 30.0%
ACAACCTTAGTTTCACATAT+GGG + chr5_2:16568360-16568379 Msa0760190:intron 30.0%
GTTCAATATCCCCTTAAAAT+GGG - chr5_2:16568593-16568612 None:intergenic 30.0%
AGTTCAATATCCCCTTAAAA+TGG - chr5_2:16568594-16568613 None:intergenic 30.0%
AGTTATTGTATTATGCAGTG+TGG + chr5_2:16568690-16568709 Msa0760190:intron 30.0%
AGTTGAGAAAAGGGTAAATT+TGG + chr5_2:16568716-16568735 Msa0760190:intron 30.0%
GTTGAGAAAAGGGTAAATTT+GGG + chr5_2:16568717-16568736 Msa0760190:intron 30.0%
AGTTTAATGTAACAACCAAG+GGG - chr5_2:16568849-16568868 None:intergenic 30.0%
CTAACTATGATTCCAGATAA+AGG - chr5_2:16568911-16568930 None:intergenic 30.0%
AATGCAGAAAGGACAAATTA+AGG + chr5_2:16569039-16569058 Msa0760190:intron 30.0%
ATGCAGAAAGGACAAATTAA+GGG + chr5_2:16569040-16569059 Msa0760190:intron 30.0%
!!! GTGTTTTTTGTTTTGGAAAC+TGG - chr5_2:16569236-16569255 None:intergenic 30.0%
!!! CATTTCCGTGTTTTTTGTTT+TGG - chr5_2:16569243-16569262 None:intergenic 30.0%
AAACAAAAAACACGGAAATG+TGG + chr5_2:16569243-16569262 Msa0760190:intron 30.0%
!! GCAGGATATGTATTTTTAAG+TGG - chr5_2:16569529-16569548 None:intergenic 30.0%
! GTTATTTCAAAGCTGGATTA+AGG - chr5_2:16569852-16569871 None:intergenic 30.0%
! CATACAAGTTATTTCAAAGC+TGG - chr5_2:16569859-16569878 None:intergenic 30.0%
! TTTCATCCATTTGTTACGAA+TGG + chr5_2:16569965-16569984 Msa0760190:intron 30.0%
!! TCTTTTGCTATGATAGAGAA+AGG + chr5_2:16570051-16570070 Msa0760190:CDS 30.0%
! AAACAAAGAATGAAAAGTGC+CGG - chr5_2:16570124-16570143 None:intergenic 30.0%
! TTAAAGCTTTTTATCCTTGC+AGG + chr5_2:16570301-16570320 Msa0760190:intron 30.0%
!! TTTTTAACAAGGCCATTTTG+TGG + chr5_2:16570362-16570381 Msa0760190:three_prime_UTR 30.0%
!! TTTTAACAAGGCCATTTTGT+GGG + chr5_2:16570363-16570382 Msa0760190:three_prime_UTR 30.0%
AAATTATGTCGAGGTTGTTA+TGG - chr5_2:16570524-16570543 None:intergenic 30.0%
AAGTCTATTGAAGTTGAAGT+TGG + chr5_2:16570679-16570698 Msa0760190:three_prime_UTR 30.0%
!!! TCGCTCTTTTTTTCCTTTTC+CGG - chr5_2:16564144-16564163 None:intergenic 35.0%
AAAAGAGCGAGAGAAAGAAA+AGG + chr5_2:16564154-16564173 Msa0760190:CDS 35.0%
ATTAGTATTGTCGTGTAGGA+TGG + chr5_2:16564553-16564572 Msa0760190:intron 35.0%
CACTTGTAAGATTGTTTGAG+AGG - chr5_2:16564830-16564849 None:intergenic 35.0%
TTAGTTAAGTTCGGATAGCT+TGG - chr5_2:16565010-16565029 None:intergenic 35.0%
GCTGAACTACTTGATTTAGT+TGG + chr5_2:16565048-16565067 Msa0760190:intron 35.0%
! TGGTACTTTGAGAACTTGTT+CGG + chr5_2:16565233-16565252 Msa0760190:CDS 35.0%
! TTTGAGAACTTGTTCGGTTA+AGG + chr5_2:16565239-16565258 Msa0760190:CDS 35.0%
AGCAGTCAGTTGAATTGATT+GGG - chr5_2:16565383-16565402 None:intergenic 35.0%
AAGCAGTCAGTTGAATTGAT+TGG - chr5_2:16565384-16565403 None:intergenic 35.0%
AATCAATTCAACTGACTGCT+TGG + chr5_2:16565383-16565402 Msa0760190:CDS 35.0%
!! GTTAGTGTTTTTAACCCAAG+TGG + chr5_2:16565709-16565728 Msa0760190:intron 35.0%
!! ACTGGGAGTTTTATGTAAAC+AGG - chr5_2:16565870-16565889 None:intergenic 35.0%
! CTAGAACTTTTTACACAGGT+TGG - chr5_2:16565935-16565954 None:intergenic 35.0%
AACAGAGTTAAAGCCTCAAA+AGG - chr5_2:16565995-16566014 None:intergenic 35.0%
TAATACCAGCCTGCAATAAA+AGG - chr5_2:16566053-16566072 None:intergenic 35.0%
GGATGCATGTATAACATGAT+AGG - chr5_2:16566293-16566312 None:intergenic 35.0%
ACTACATGAAGGACTGAATA+GGG + chr5_2:16566494-16566513 Msa0760190:intron 35.0%
ATAAGATTGTTTCCCTAGCT+TGG + chr5_2:16566622-16566641 Msa0760190:intron 35.0%
TTCACATACTATCCAAGCTA+GGG - chr5_2:16566637-16566656 None:intergenic 35.0%
TTTCACATACTATCCAAGCT+AGG - chr5_2:16566638-16566657 None:intergenic 35.0%
ATGTCAGAAGTTCCTCTAAT+TGG + chr5_2:16566681-16566700 Msa0760190:intron 35.0%
CTTGACTCTTCAAATTCTGA+AGG + chr5_2:16566761-16566780 Msa0760190:intron 35.0%
GTTATGGCATTTCATGAATG+TGG + chr5_2:16566786-16566805 Msa0760190:CDS 35.0%
CAATATCCAAAACCCATTGT+GGG - chr5_2:16566845-16566864 None:intergenic 35.0%
GATCTGTGAAAAATATGTCC+TGG - chr5_2:16566878-16566897 None:intergenic 35.0%
GAAATACTGAATGCCTATCT+TGG + chr5_2:16566910-16566929 Msa0760190:CDS 35.0%
AATACTGAATGCCTATCTTG+GGG + chr5_2:16566912-16566931 Msa0760190:CDS 35.0%
AATGCAGATACACTGGAAAT+TGG - chr5_2:16567070-16567089 None:intergenic 35.0%
GTATCTGCATTTCATCTGAA+AGG + chr5_2:16567079-16567098 Msa0760190:intron 35.0%
TAGCCTTCTGCATTATATAC+AGG + chr5_2:16567229-16567248 Msa0760190:intron 35.0%
AGACCTGTATATAATGCAGA+AGG - chr5_2:16567235-16567254 None:intergenic 35.0%
! AATACCCTTCCTTTTCAGAA+AGG + chr5_2:16567357-16567376 Msa0760190:CDS 35.0%
GAGACAAAACATTATCTGCA+TGG - chr5_2:16567742-16567761 None:intergenic 35.0%
! TTTTTGTTCCCTCAAAAGCA+AGG - chr5_2:16567772-16567791 None:intergenic 35.0%
TTGGTATGCCCTTTAATATG+AGG + chr5_2:16567933-16567952 Msa0760190:intron 35.0%
AGTAAACAGAAAAAGAGGTC+TGG + chr5_2:16568042-16568061 Msa0760190:intron 35.0%
CAGATTCTATCACATCTCAA+AGG + chr5_2:16568103-16568122 Msa0760190:intron 35.0%
GAAAATGCCATCATACAACT+TGG - chr5_2:16568187-16568206 None:intergenic 35.0%
CAACCTTAGTTTCACATATG+GGG + chr5_2:16568361-16568380 Msa0760190:intron 35.0%
TTACCCCATATGTGAAACTA+AGG - chr5_2:16568367-16568386 None:intergenic 35.0%
ATGGGGTAAAATTCAATCTC+CGG + chr5_2:16568378-16568397 Msa0760190:intron 35.0%
! CAGGTCTATGTTTGATTTAG+GGG - chr5_2:16568516-16568535 None:intergenic 35.0%
! CCAGGTCTATGTTTGATTTA+GGG - chr5_2:16568517-16568536 None:intergenic 35.0%
AGTGTGGTTTAGTTGAGAAA+AGG + chr5_2:16568706-16568725 Msa0760190:intron 35.0%
GTGTGGTTTAGTTGAGAAAA+GGG + chr5_2:16568707-16568726 Msa0760190:intron 35.0%
CTATCTACAATAGACCCAAA+TGG - chr5_2:16568786-16568805 None:intergenic 35.0%
AAGTTTGAGTCGTGAATCAA+AGG - chr5_2:16568814-16568833 None:intergenic 35.0%
TAACGTGGTAATCCTTTATC+TGG + chr5_2:16568896-16568915 Msa0760190:intron 35.0%
AACTGAAAACGCAATCAAAC+AGG + chr5_2:16569423-16569442 Msa0760190:intron 35.0%
!! CATTTTAACGTTAGGAAGCA+TGG + chr5_2:16569494-16569513 Msa0760190:intron 35.0%
! ATGCTTTTACTTTCAATGGC+AGG - chr5_2:16569547-16569566 None:intergenic 35.0%
! TGGCATGCTTTTACTTTCAA+TGG - chr5_2:16569551-16569570 None:intergenic 35.0%
GACAAGGATACAACTTCATT+TGG - chr5_2:16569571-16569590 None:intergenic 35.0%
ACTTAATGAATAAACGCTGC+AGG + chr5_2:16569596-16569615 Msa0760190:intron 35.0%
ATATCACAATCCCACAAATC+AGG + chr5_2:16569677-16569696 Msa0760190:CDS 35.0%
!! TTTTTCAGAACCTCAAACAC+AGG - chr5_2:16569714-16569733 None:intergenic 35.0%
ACCATGAAATTTGTCTGCTT+AGG + chr5_2:16569744-16569763 Msa0760190:CDS 35.0%
TCCTAAGCAGACAAATTTCA+TGG - chr5_2:16569748-16569767 None:intergenic 35.0%
ATTTCAAAGCTGGATTAAGG+TGG - chr5_2:16569849-16569868 None:intergenic 35.0%
CAAATGGATGAAAACATGCA+TGG - chr5_2:16569958-16569977 None:intergenic 35.0%
CAATCACCATTCGTAACAAA+TGG - chr5_2:16569974-16569993 None:intergenic 35.0%
TACAGGTATTAAACTCAGCT+TGG + chr5_2:16569994-16570013 Msa0760190:intron 35.0%
ACAGGTATTAAACTCAGCTT+GGG + chr5_2:16569995-16570014 Msa0760190:intron 35.0%
AAATGTTTGCCTGTCAGAAT+TGG + chr5_2:16570169-16570188 Msa0760190:CDS 35.0%
TGAAGAAATCCAATTCTGAC+AGG - chr5_2:16570181-16570200 None:intergenic 35.0%
TTCTTCATCAAATGCATGCA+TGG + chr5_2:16570194-16570213 Msa0760190:CDS 35.0%
AGATGACAGGGAATCTTTAA+TGG + chr5_2:16570326-16570345 Msa0760190:CDS 35.0%
!! TTTAACAAGGCCATTTTGTG+GGG + chr5_2:16570364-16570383 Msa0760190:three_prime_UTR 35.0%
GTAAATTACACCCCACAAAA+TGG - chr5_2:16570377-16570396 None:intergenic 35.0%
TGCAATGTCTTCTGTAACAA+CGG + chr5_2:16570456-16570475 Msa0760190:three_prime_UTR 35.0%
GTTCGTTCAGAAATGCATTC+AGG - chr5_2:16563985-16564004 None:intergenic 40.0%
TTGTGGTTGGGGTAAGTAAT+CGG - chr5_2:16564072-16564091 None:intergenic 40.0%
!!! CTCTTTTTTTCCTTTTCCGG+TGG - chr5_2:16564141-16564160 None:intergenic 40.0%
AAAAGGAACGAACGAAGCTA+AGG + chr5_2:16564171-16564190 Msa0760190:CDS 40.0%
AAAGGAACGAACGAAGCTAA+GGG + chr5_2:16564172-16564191 Msa0760190:CDS 40.0%
ATCACGAGTAGAATGTTAGC+TGG + chr5_2:16564212-16564231 Msa0760190:CDS 40.0%
GAGGGAAATTACCATACTGA+CGG - chr5_2:16564241-16564260 None:intergenic 40.0%
AGAAAAGCAACCAACCATGT+TGG - chr5_2:16564369-16564388 None:intergenic 40.0%
!! AGAAAGCACTAACACAGACA+CGG - chr5_2:16564438-16564457 None:intergenic 40.0%
TCAAATAAGCCGATCCAAAC+TGG + chr5_2:16564869-16564888 Msa0760190:intron 40.0%
TAACTAACTAAGGGCCAGTT+TGG - chr5_2:16564886-16564905 None:intergenic 40.0%
TTGACTTTCAACTGACCTTG+CGG - chr5_2:16565205-16565224 None:intergenic 40.0%
TCAGTTGAAAGTCAACCATC+TGG + chr5_2:16565210-16565229 Msa0760190:CDS 40.0%
AACACTAGAGAATCAGTCAC+CGG + chr5_2:16565263-16565282 Msa0760190:CDS 40.0%
CATTCATCAACTCTAAGTCC+CGG - chr5_2:16565285-16565304 None:intergenic 40.0%
GTAGAAAGGGACTCAAAGAA+TGG + chr5_2:16565339-16565358 Msa0760190:CDS 40.0%
CTCAGCATAATCAGATTCTC+TGG + chr5_2:16565571-16565590 Msa0760190:intron 40.0%
CATAATCAGATTCTCTGGTC+TGG + chr5_2:16565576-16565595 Msa0760190:intron 40.0%
!! ATGCAATTGGTTCGCAACTT+TGG - chr5_2:16565670-16565689 None:intergenic 40.0%
ATGTCGAGAAGTGATTGAAC+AGG + chr5_2:16565754-16565773 Msa0760190:intron 40.0%
!!! ATTAGCCTTTTATTGCAGGC+TGG + chr5_2:16566045-16566064 Msa0760190:intron 40.0%
!! ATGGTGTTGTTGTGGATTGT+TGG + chr5_2:16566148-16566167 Msa0760190:CDS 40.0%
! TGTTGTTGTGGATTGTTGGT+GGG + chr5_2:16566152-16566171 Msa0760190:CDS 40.0%
AATATGTGTGGTCTGGGTAT+AGG + chr5_2:16566202-16566221 Msa0760190:CDS 40.0%
ATATGTGTGGTCTGGGTATA+GGG + chr5_2:16566203-16566222 Msa0760190:CDS 40.0%
CATGCATCCATCCTTCAAAA+TGG + chr5_2:16566304-16566323 Msa0760190:intron 40.0%
!! CAAGAGTGTCATTTCTGGTT+AGG + chr5_2:16566423-16566442 Msa0760190:intron 40.0%
CACTACATGAAGGACTGAAT+AGG + chr5_2:16566493-16566512 Msa0760190:intron 40.0%
AATAGGGAACACAGAGAATG+TGG + chr5_2:16566510-16566529 Msa0760190:intron 40.0%
ATGGCATTTCATGAATGTGG+AGG + chr5_2:16566789-16566808 Msa0760190:CDS 40.0%
TGGCATTTCATGAATGTGGA+GGG + chr5_2:16566790-16566809 Msa0760190:CDS 40.0%
! ATTGATTTCCCTCCCACAAT+GGG + chr5_2:16566830-16566849 Msa0760190:CDS 40.0%
CCAATATCCAAAACCCATTG+TGG - chr5_2:16566846-16566865 None:intergenic 40.0%
!!! CCACAATGGGTTTTGGATAT+TGG + chr5_2:16566843-16566862 Msa0760190:CDS 40.0%
GGATATTGGAAAAGACAACC+AGG + chr5_2:16566857-16566876 Msa0760190:CDS 40.0%
! TTTTCACAGATCGTGAAGGA+CGG + chr5_2:16566886-16566905 Msa0760190:CDS 40.0%
CTTTGTCAATTCCCCAAGAT+AGG - chr5_2:16566926-16566945 None:intergenic 40.0%
CAAAGGAAGAACTGGAATTG+AGG + chr5_2:16566956-16566975 Msa0760190:CDS 40.0%
CAGATGAAATGCAGATACAC+TGG - chr5_2:16567077-16567096 None:intergenic 40.0%
! TTTGATGACCTGTTTGCAGA+AGG + chr5_2:16567287-16567306 Msa0760190:CDS 40.0%
CAATCATACCTTCTGCAAAC+AGG - chr5_2:16567298-16567317 None:intergenic 40.0%
TGATGCTGTAGAAATTGGTC+TGG + chr5_2:16567316-16567335 Msa0760190:CDS 40.0%
! GATGCTGTAGAAATTGGTCT+GGG + chr5_2:16567317-16567336 Msa0760190:CDS 40.0%
! CCATCCTTTCTGAAAAGGAA+GGG - chr5_2:16567364-16567383 None:intergenic 40.0%
! CCTTCCTTTTCAGAAAGGAT+GGG + chr5_2:16567362-16567381 Msa0760190:CDS 40.0%
! CTTCCTTTTCAGAAAGGATG+GGG + chr5_2:16567363-16567382 Msa0760190:CDS 40.0%
!! TTTCAGGTACCTCGTTCTTT+TGG + chr5_2:16567410-16567429 Msa0760190:intron 40.0%
CAAAAGAATCCAGTCTCATG+TGG - chr5_2:16567650-16567669 None:intergenic 40.0%
ATGGACGCTTCTTCTTACAT+TGG + chr5_2:16567696-16567715 Msa0760190:CDS 40.0%
TGCATGGTCTACTAAAGTCT+GGG - chr5_2:16567726-16567745 None:intergenic 40.0%
!! TCTTGCAAACCTTGCTTTTG+AGG + chr5_2:16567760-16567779 Msa0760190:CDS 40.0%
!! CTTGCAAACCTTGCTTTTGA+GGG + chr5_2:16567761-16567780 Msa0760190:CDS 40.0%
TGGTACCTATAGAGTCAGTT+TGG + chr5_2:16567914-16567933 Msa0760190:intron 40.0%
! GCATACCAAACTGACTCTAT+AGG - chr5_2:16567922-16567941 None:intergenic 40.0%
GGAAACCAGGAAGAAAACAA+AGG + chr5_2:16568291-16568310 Msa0760190:intron 40.0%
AACCAGGAAGAAAACAAAGG+AGG + chr5_2:16568294-16568313 Msa0760190:intron 40.0%
CCCTAAATCAAACATAGACC+TGG + chr5_2:16568514-16568533 Msa0760190:intron 40.0%
! GCCAGGTCTATGTTTGATTT+AGG - chr5_2:16568518-16568537 None:intergenic 40.0%
ATCGTTAAAACTTTCACGCC+AGG - chr5_2:16568535-16568554 None:intergenic 40.0%
!!! TTCTTTTTGGGGTTGTGTAC+AGG + chr5_2:16568985-16569004 Msa0760190:intron 40.0%
CAGGTATGAGATCAGAAATC+AGG + chr5_2:16569004-16569023 Msa0760190:intron 40.0%
! AGTCTTGTACCACCAGTATA+CGG - chr5_2:16569628-16569647 None:intergenic 40.0%
! GAGTATCCATCCTGATTTGT+GGG - chr5_2:16569690-16569709 None:intergenic 40.0%
! AGAGTATCCATCCTGATTTG+TGG - chr5_2:16569691-16569710 None:intergenic 40.0%
AGGATTTAATCCTTCCAACC+AGG + chr5_2:16569764-16569783 Msa0760190:CDS 40.0%
CTAAAATTACCTGCCAACTC+AGG - chr5_2:16569821-16569840 None:intergenic 40.0%
!! AACTTGTATGATGGGTGAAG+TGG + chr5_2:16569869-16569888 Msa0760190:intron 40.0%
GTTACGAATGGTGATTGTAC+AGG + chr5_2:16569977-16569996 Msa0760190:intron 40.0%
GTACGAGAGATTGATTGAGA+TGG + chr5_2:16570073-16570092 Msa0760190:CDS 40.0%
ACATTTCCCTGAAGCAAAGA+TGG - chr5_2:16570155-16570174 None:intergenic 40.0%
GGGTGTAATTTACCTTGTTG+TGG + chr5_2:16570384-16570403 Msa0760190:three_prime_UTR 40.0%
! TTACCTTGTTGTGGCTACAT+AGG + chr5_2:16570393-16570412 Msa0760190:three_prime_UTR 40.0%
! TACCTTGTTGTGGCTACATA+GGG + chr5_2:16570394-16570413 Msa0760190:three_prime_UTR 40.0%
TTCTACTCGTGATAGCTCGA+CGG - chr5_2:16564205-16564224 None:intergenic 45.0%
GTATGGTAATTTCCCTCTCC+CGG + chr5_2:16564244-16564263 Msa0760190:CDS 45.0%
GGTTGGATTGTTGATGCTGA+TGG + chr5_2:16564314-16564333 Msa0760190:CDS 45.0%
AACCAACCATGTTGGAAGGA+GGG - chr5_2:16564361-16564380 None:intergenic 45.0%
AAGCAACCAACCATGTTGGA+AGG - chr5_2:16564365-16564384 None:intergenic 45.0%
!! GAAAGCACTAACACAGACAC+GGG - chr5_2:16564437-16564456 None:intergenic 45.0%
AACTAAGGGCCAGTTTGGAT+CGG - chr5_2:16564881-16564900 None:intergenic 45.0%
GTTGAAAGTCAACCATCTGG+TGG + chr5_2:16565213-16565232 Msa0760190:CDS 45.0%
! GTTCTCAAAGTACCACCAGA+TGG - chr5_2:16565228-16565247 None:intergenic 45.0%
ACACTAGAGAATCAGTCACC+GGG + chr5_2:16565264-16565283 Msa0760190:CDS 45.0%
CAATTCAACTGACTGCTTGG+AGG + chr5_2:16565386-16565405 Msa0760190:CDS 45.0%
! TCACTTAGCGTGTCCTTTTG+AGG + chr5_2:16565979-16565998 Msa0760190:intron 45.0%
!! TGATGGATCCTGAAGGCATT+AGG + chr5_2:16566091-16566110 Msa0760190:CDS 45.0%
! GTGTTGTTGTGGATTGTTGG+TGG + chr5_2:16566151-16566170 Msa0760190:CDS 45.0%
! GTTGTTGTGGATTGTTGGTG+GGG + chr5_2:16566153-16566172 Msa0760190:CDS 45.0%
GGAACTCCCAGAAATATGTG+TGG + chr5_2:16566190-16566209 Msa0760190:CDS 45.0%
TCCCAGAAATATGTGTGGTC+TGG + chr5_2:16566195-16566214 Msa0760190:CDS 45.0%
CCCAGACCACACATATTTCT+GGG - chr5_2:16566199-16566218 None:intergenic 45.0%
CCCAGAAATATGTGTGGTCT+GGG + chr5_2:16566196-16566215 Msa0760190:CDS 45.0%
ACCCAGACCACACATATTTC+TGG - chr5_2:16566200-16566219 None:intergenic 45.0%
ACAGAGAATGTGGCGAAGTA+CGG + chr5_2:16566520-16566539 Msa0760190:intron 45.0%
!! CATTGATTTCCCTCCCACAA+TGG + chr5_2:16566829-16566848 Msa0760190:CDS 45.0%
ATCCAAAACCCATTGTGGGA+GGG - chr5_2:16566841-16566860 None:intergenic 45.0%
TATCCAAAACCCATTGTGGG+AGG - chr5_2:16566842-16566861 None:intergenic 45.0%
GACAAAGAGCGAGTTCTCAA+AGG + chr5_2:16566939-16566958 Msa0760190:CDS 45.0%
CGAGTTCTCAAAGGAAGAAC+TGG + chr5_2:16566948-16566967 Msa0760190:CDS 45.0%
!! AAATTGGTCTGGGAGCATCT+GGG + chr5_2:16567327-16567346 Msa0760190:CDS 45.0%
! CCCTTCCTTTTCAGAAAGGA+TGG + chr5_2:16567361-16567380 Msa0760190:CDS 45.0%
! CCCATCCTTTCTGAAAAGGA+AGG - chr5_2:16567365-16567384 None:intergenic 45.0%
!! TCCTGGTATTGGTGAGTTTC+AGG + chr5_2:16567394-16567413 Msa0760190:CDS 45.0%
ACCTGAAACTCACCAATACC+AGG - chr5_2:16567398-16567417 None:intergenic 45.0%
AAAAGAGTGACCGCGTAGTT+TGG - chr5_2:16567585-16567604 None:intergenic 45.0%
! AACTACGCGGTCACTCTTTT+TGG + chr5_2:16567585-16567604 Msa0760190:CDS 45.0%
! ACTACGCGGTCACTCTTTTT+GGG + chr5_2:16567586-16567605 Msa0760190:CDS 45.0%
! CTAGAGGACCTGATAATGCT+GGG + chr5_2:16567609-16567628 Msa0760190:CDS 45.0%
TTGTAGTGCCCAGCATTATC+AGG - chr5_2:16567620-16567639 None:intergenic 45.0%
AACTCTATGCCACATGAGAC+TGG + chr5_2:16567638-16567657 Msa0760190:CDS 45.0%
! ACTGGATTCTTTTGTGAGCG+AGG + chr5_2:16567656-16567675 Msa0760190:CDS 45.0%
CTGCATGGTCTACTAAAGTC+TGG - chr5_2:16567727-16567746 None:intergenic 45.0%
TGGATGATGTTAGTTGCTGC+TGG + chr5_2:16567865-16567884 Msa0760190:intron 45.0%
ATTGCAAGAGACTGGAAACC+AGG + chr5_2:16568278-16568297 Msa0760190:intron 45.0%
!!! CACCTCCTTTGTTTTCTTCC+TGG - chr5_2:16568299-16568318 None:intergenic 45.0%
GAGTAGCGTTCATCTTCTTC+CGG - chr5_2:16568400-16568419 None:intergenic 45.0%
TCCTACCATAGCGTGGTTAA+CGG + chr5_2:16568749-16568768 Msa0760190:intron 45.0%
!! ACGGAAGTGTTGGATCCATT+TGG + chr5_2:16568768-16568787 Msa0760190:intron 45.0%
!! CGGAAGTGTTGGATCCATTT+GGG + chr5_2:16568769-16568788 Msa0760190:intron 45.0%
ACGACTCAAACTTGTGACTG+AGG + chr5_2:16568821-16568840 Msa0760190:intron 45.0%
GTCAATTCTGCTGCATGACT+AGG - chr5_2:16569651-16569670 None:intergenic 45.0%
CACAATCCCACAAATCAGGA+TGG + chr5_2:16569681-16569700 Msa0760190:CDS 45.0%
TGGATACTCTCCTGTGTTTG+AGG + chr5_2:16569701-16569720 Msa0760190:CDS 45.0%
! GAGTCATTGGTTGATCCAGA+TGG + chr5_2:16569795-16569814 Msa0760190:CDS 45.0%
TTAAACTCAGCTTGGGAACG+AGG + chr5_2:16570002-16570021 Msa0760190:CDS 45.0%
TAAACTCAGCTTGGGAACGA+GGG + chr5_2:16570003-16570022 Msa0760190:CDS 45.0%
CGGTGATCAGGATCATTTCT+GGG - chr5_2:16570104-16570123 None:intergenic 45.0%
CCAGAAATGATCCTGATCAC+CGG + chr5_2:16570102-16570121 Msa0760190:CDS 45.0%
!! AATGAAAAGTGCCGGTGATC+AGG - chr5_2:16570116-16570135 None:intergenic 45.0%
TCAGCAACCATCTTTGCTTC+AGG + chr5_2:16570145-16570164 Msa0760190:CDS 45.0%
CAGCAACCATCTTTGCTTCA+GGG + chr5_2:16570146-16570165 Msa0760190:CDS 45.0%
TTGTGGGTCGAGATCTTGTG+TGG - chr5_2:16564036-16564055 None:intergenic 50.0%
GGGACAAATTCCACCGGAAA+AGG + chr5_2:16564128-16564147 Msa0760190:CDS 50.0%
TTAGCTGGACTCCGTCAGTA+TGG + chr5_2:16564227-16564246 Msa0760190:CDS 50.0%
TCATTCATATCAGCACGCGC+CGG - chr5_2:16564266-16564285 None:intergenic 50.0%
CAACCAACCATGTTGGAAGG+AGG - chr5_2:16564362-16564381 None:intergenic 50.0%
GTGTTCGACATCGACACATG+TGG + chr5_2:16564507-16564526 Msa0760190:intron 50.0%
GTCGTGTAGGATGGTAACTC+TGG + chr5_2:16564562-16564581 Msa0760190:intron 50.0%
! GGAGGCTGATCAGGTGATTT+TGG + chr5_2:16565404-16565423 Msa0760190:intron 50.0%
!! TGCCAGTTGATGGATCCTGA+AGG + chr5_2:16566084-16566103 Msa0760190:CDS 50.0%
TGCCTTCAGGATCCATCAAC+TGG - chr5_2:16566089-16566108 None:intergenic 50.0%
!! TGTTGGTGGGGCATTGTTGA+AGG + chr5_2:16566165-16566184 Msa0760190:CDS 50.0%
AGAATGTGGCGAAGTACGGA+GGG + chr5_2:16566524-16566543 Msa0760190:intron 50.0%
!! TTCCCTCCCACAATGGGTTT+TGG + chr5_2:16566836-16566855 Msa0760190:CDS 50.0%
!! GAAATTGGTCTGGGAGCATC+TGG + chr5_2:16567326-16567345 Msa0760190:CDS 50.0%
!! AATTGGTCTGGGAGCATCTG+GGG + chr5_2:16567328-16567347 Msa0760190:CDS 50.0%
! CCACCCCATCCTTTCTGAAA+AGG - chr5_2:16567369-16567388 None:intergenic 50.0%
! CCTTTTCAGAAAGGATGGGG+TGG + chr5_2:16567366-16567385 Msa0760190:CDS 50.0%
TTTCAGAAAGGATGGGGTGG+AGG + chr5_2:16567369-16567388 Msa0760190:CDS 50.0%
GAAATGGGGCCAAAAGAACG+AGG - chr5_2:16567422-16567441 None:intergenic 50.0%
!! GGTCACTCTTTTTGGGCTAG+AGG + chr5_2:16567593-16567612 Msa0760190:CDS 50.0%
! GCTAGAGGACCTGATAATGC+TGG + chr5_2:16567608-16567627 Msa0760190:CDS 50.0%
GGTGAAGGATTGCAAGAGAC+TGG + chr5_2:16568270-16568289 Msa0760190:intron 50.0%
ACAAAGCTCCTACCATAGCG+TGG + chr5_2:16568742-16568761 Msa0760190:intron 50.0%
TCCGTTAACCACGCTATGGT+AGG - chr5_2:16568753-16568772 None:intergenic 50.0%
CACTTCCGTTAACCACGCTA+TGG - chr5_2:16568757-16568776 None:intergenic 50.0%
! AGCGTGGTTAACGGAAGTGT+TGG + chr5_2:16568758-16568777 Msa0760190:intron 50.0%
TTGTACCACCAGTATACGGC+AGG - chr5_2:16569624-16569643 None:intergenic 50.0%
CATGCAGCAGAATTGACTGC+AGG + chr5_2:16569654-16569673 Msa0760190:CDS 50.0%
! TCGTTAGCTTCCTGGTTGGA+AGG - chr5_2:16569777-16569796 None:intergenic 50.0%
! TGACTCGTTAGCTTCCTGGT+TGG - chr5_2:16569781-16569800 None:intergenic 50.0%
! CCAATGACTCGTTAGCTTCC+TGG - chr5_2:16569785-16569804 None:intergenic 50.0%
CCAGGAAGCTAACGAGTCAT+TGG + chr5_2:16569782-16569801 Msa0760190:CDS 50.0%
TTGATCCAGATGGCCTGAGT+TGG + chr5_2:16569805-16569824 Msa0760190:CDS 50.0%
! GAACGAGGGTTGATCACTTC+TGG + chr5_2:16570017-16570036 Msa0760190:CDS 50.0%
CCGGTGATCAGGATCATTTC+TGG - chr5_2:16570105-16570124 None:intergenic 50.0%
ATCCTTGCAGGTGAGATGAC+AGG + chr5_2:16570313-16570332 Msa0760190:intron 50.0%
TCCTTGCAGGTGAGATGACA+GGG + chr5_2:16570314-16570333 Msa0760190:intron 50.0%
GTCCCTATGTAGCCACAACA+AGG - chr5_2:16570399-16570418 None:intergenic 50.0%
GGGGTAAGTAATCGGAGCTG+TGG - chr5_2:16564064-16564083 None:intergenic 55.0%
CATTCATATCAGCACGCGCC+GGG - chr5_2:16564265-16564284 None:intergenic 55.0%
TGTTGGAAGGAGGGAGACAC+TGG - chr5_2:16564352-16564371 None:intergenic 55.0%
GTGTCTCCCTCCTTCCAACA+TGG + chr5_2:16564352-16564371 Msa0760190:CDS 55.0%
CTCCCTCCTTCCAACATGGT+TGG + chr5_2:16564356-16564375 Msa0760190:intron 55.0%
CAGAAGCTACCTAGCAGTGC+TGG + chr5_2:16564485-16564504 Msa0760190:intron 55.0%
TGTCGAACACCAGCACTGCT+AGG - chr5_2:16564497-16564516 None:intergenic 55.0%
TCCAGGGATCATTTGCCGCA+AGG + chr5_2:16565187-16565206 Msa0760190:intron 55.0%
ACCTTGCGGCAAATGATCCC+TGG - chr5_2:16565191-16565210 None:intergenic 55.0%
TGACTGCTTGGAGGCTGATC+AGG + chr5_2:16565395-16565414 Msa0760190:CDS 55.0%
!! GGATCCTGAAGGCATTAGGC+AGG + chr5_2:16566095-16566114 Msa0760190:CDS 55.0%
AGCTCCTGCCTAATGCCTTC+AGG - chr5_2:16566102-16566121 None:intergenic 55.0%
GAGAATGTGGCGAAGTACGG+AGG + chr5_2:16566523-16566542 Msa0760190:intron 55.0%
AGTACGGAGGGCAAACGTAG+TGG + chr5_2:16566536-16566555 Msa0760190:intron 55.0%
!! GGGTGGAGGTATCCTGGTAT+TGG + chr5_2:16567383-16567402 Msa0760190:CDS 55.0%
CTTGTGACTGAGGTTCCCCT+TGG + chr5_2:16568831-16568850 Msa0760190:intron 55.0%
TGCAGGTTCCTGCCGTATAC+TGG + chr5_2:16569613-16569632 Msa0760190:intron 55.0%
AGGTTCCTGCCGTATACTGG+TGG + chr5_2:16569616-16569635 Msa0760190:intron 55.0%
TCCCTGTCATCTCACCTGCA+AGG - chr5_2:16570318-16570337 None:intergenic 55.0%
! CGGAGCTGTGGTCGCTTTGT+GGG - chr5_2:16564052-16564071 None:intergenic 60.0%
! TCGGAGCTGTGGTCGCTTTG+TGG - chr5_2:16564053-16564072 None:intergenic 60.0%
AGGAGGGAGACACTGGCGAT+AGG - chr5_2:16564345-16564364 None:intergenic 60.0%
!! GGTGGGGCATTGTTGAAGGC+TGG + chr5_2:16566169-16566188 Msa0760190:CDS 60.0%
CGGAGGGCAAACGTAGTGGT+TGG + chr5_2:16566540-16566559 Msa0760190:intron 60.0%
!! AGGATGGGGTGGAGGTATCC+TGG + chr5_2:16567377-16567396 Msa0760190:CDS 60.0%
CGCAGAGCTGCCAAACTACG+CGG + chr5_2:16567572-16567591 Msa0760190:CDS 60.0%
! TCCAGATGGCCTGAGTTGGC+AGG + chr5_2:16569809-16569828 Msa0760190:CDS 60.0%
ACCTGCCAACTCAGGCCATC+TGG - chr5_2:16569813-16569832 None:intergenic 60.0%
TAGGCGGCGGGGTTGTGGTT+GGG - chr5_2:16564084-16564103 None:intergenic 65.0%
GCGGCGGGGACAAATTCCAC+CGG + chr5_2:16564122-16564141 Msa0760190:CDS 65.0%
TATCAGCACGCGCCGGGAGA+GGG - chr5_2:16564259-16564278 None:intergenic 65.0%
ATATCAGCACGCGCCGGGAG+AGG - chr5_2:16564260-16564279 None:intergenic 65.0%
CTCTCGCGCGTGAAGCTGGT+TGG + chr5_2:16564297-16564316 Msa0760190:CDS 65.0%
AGGCGGCGGGGTTGTGGTTG+GGG - chr5_2:16564083-16564102 None:intergenic 70.0%
GTAGGCGGCGGGGTTGTGGT+TGG - chr5_2:16564085-16564104 None:intergenic 70.0%
ATTTGTCCCCGCCGCCGTGG+CGG - chr5_2:16564117-16564136 None:intergenic 70.0%
GGAATTTGTCCCCGCCGCCG+TGG - chr5_2:16564120-16564139 None:intergenic 70.0%
GCTGCTCTCGCGCGTGAAGC+TGG + chr5_2:16564293-16564312 Msa0760190:CDS 70.0%
CCACAACCCCGCCGCCTACG+CGG + chr5_2:16564086-16564105 Msa0760190:CDS 75.0%
TGGCGGCGAAGCCGCGTAGG+CGG - chr5_2:16564100-16564119 None:intergenic 75.0%
CCTACGCGGCTTCGCCGCCA+CGG + chr5_2:16564100-16564119 Msa0760190:CDS 75.0%
! CCGCGTAGGCGGCGGGGTTG+TGG - chr5_2:16564089-16564108 None:intergenic 80.0%
! GCGAAGCCGCGTAGGCGGCG+GGG - chr5_2:16564095-16564114 None:intergenic 80.0%
! GGCGAAGCCGCGTAGGCGGC+GGG - chr5_2:16564096-16564115 None:intergenic 80.0%
! CGGCGAAGCCGCGTAGGCGG+CGG - chr5_2:16564097-16564116 None:intergenic 80.0%
! CCGTGGCGGCGAAGCCGCGT+AGG - chr5_2:16564103-16564122 None:intergenic 80.0%
! ACGCGGCTTCGCCGCCACGG+CGG + chr5_2:16564103-16564122 Msa0760190:CDS 80.0%
! CGGCTTCGCCGCCACGGCGG+CGG + chr5_2:16564106-16564125 Msa0760190:CDS 85.0%
! GGCTTCGCCGCCACGGCGGC+GGG + chr5_2:16564107-16564126 Msa0760190:CDS 85.0%
! GCTTCGCCGCCACGGCGGCG+GGG + chr5_2:16564108-16564127 Msa0760190:CDS 85.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 16563904 16570708 16563904 ID=Msa0760190;Name=Msa0760190
chr5_2 mRNA 16563904 16570708 16563904 ID=Msa0760190-mRNA-1;Parent=Msa0760190;Name=Msa0760190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=101|1|1|1|1|1|10|363|650
chr5_2 exon 16563904 16564373 16563904 ID=Msa0760190-mRNA-1:exon:7305;Parent=Msa0760190-mRNA-1
chr5_2 exon 16565192 16565416 16565192 ID=Msa0760190-mRNA-1:exon:7306;Parent=Msa0760190-mRNA-1
chr5_2 exon 16565807 16565887 16565807 ID=Msa0760190-mRNA-1:exon:7307;Parent=Msa0760190-mRNA-1
chr5_2 exon 16566063 16566266 16566063 ID=Msa0760190-mRNA-1:exon:7308;Parent=Msa0760190-mRNA-1
chr5_2 exon 16566783 16566977 16566783 ID=Msa0760190-mRNA-1:exon:7309;Parent=Msa0760190-mRNA-1
chr5_2 exon 16567251 16567415 16567251 ID=Msa0760190-mRNA-1:exon:7310;Parent=Msa0760190-mRNA-1
chr5_2 exon 16567542 16567802 16567542 ID=Msa0760190-mRNA-1:exon:7311;Parent=Msa0760190-mRNA-1
chr5_2 exon 16569618 16569830 16569618 ID=Msa0760190-mRNA-1:exon:7312;Parent=Msa0760190-mRNA-1
chr5_2 exon 16569999 16570215 16569999 ID=Msa0760190-mRNA-1:exon:7313;Parent=Msa0760190-mRNA-1
chr5_2 exon 16570323 16570708 16570323 ID=Msa0760190-mRNA-1:exon:7314;Parent=Msa0760190-mRNA-1
chr5_2 five_prime_UTR 16563904 16564004 16563904 ID=Msa0760190-mRNA-1:five_prime_utr;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16564005 16564373 16564005 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16565192 16565416 16565192 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16565807 16565887 16565807 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16566063 16566266 16566063 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16566783 16566977 16566783 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16567251 16567415 16567251 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16567542 16567802 16567542 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16569618 16569830 16569618 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16569999 16570215 16569999 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 CDS 16570323 16570345 16570323 ID=Msa0760190-mRNA-1:cds;Parent=Msa0760190-mRNA-1
chr5_2 three_prime_UTR 16570346 16570708 16570346 ID=Msa0760190-mRNA-1:three_prime_utr;Parent=Msa0760190-mRNA-1
Gene Sequence

>Msa0760190

ATGAAGAACACAAACGAAGATGCTACTTCCACACAAGATCTCGACCCACAAAGCGACCACAGCTCCGATTACTTACCCCAACCACAACCCCGCCGCCTACGCGGCTTCGCCGCCACGGCGGCGGGGACAAATTCCACCGGAAAAGGAAAAAAAGAGCGAGAGAAAGAAAAGGAACGAACGAAGCTAAGGGAACGACACCGTCGAGCTATCACGAGTAGAATGTTAGCTGGACTCCGTCAGTATGGTAATTTCCCTCTCCCGGCGCGTGCTGATATGAATGATGTACTTGCTGCTCTCGCGCGTGAAGCTGGTTGGATTGTTGATGCTGATGGAACTACCTATCGCCAGTGTCTCCCTCCTTCCAACATGGGATCATTTGCCGCAAGGTCAGTTGAAAGTCAACCATCTGGTGGTACTTTGAGAACTTGTTCGGTTAAGGAAACACTAGAGAATCAGTCACCGGGACTTAGAGTTGATGAATGTGTGTCACCTGCATCTATTGATTCTGTTTTAATTGTAGAAAGGGACTCAAAGAATGGAAACTATGCAAGTGTAAGCCCAATCAATTCAACTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGACTTCAATTGCACACCATATGTTCCTGTTTACATAAAACTCCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATGGATCCTGAAGGCATTAGGCAGGAGCTAATCCATATTAAGTCCTTAAATATTGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAACTCCCAGAAATATGTGTGGTCTGGGTATAGGGAGCTTTTTAGTATAATTAGAGAATTCAAGCTGAATATACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGACATATTTTTCACAGATCGTGAAGGACGGCGAAATACTGAATGCCTATCTTGGGGAATTGACAAAGAGCGAGTTCTCAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTATGATTGATGCTGTAGAAATTGGTCTGGGAGCATCTGGGGAGCTGAAATACCCTTCCTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTATGATAAATACTTGCAACATAGTCTGCGCAGAGCTGCCAAACTACGCGGTCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGGCACTACAACTCTATGCCACATGAGACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACTTTAGTAGACCATGCAGATAATGTTTTGTCTCTTGCAAACCTTGCTTTTGAGGGAACAAAAATTATTGTCAAGGTTCCTGCCGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAATTGACTGCAGGATATCACAATCCCACAAATCAGGATGGATACTCTCCTGTGTTTGAGGTTCTGAAAAAACACGCTGTCACCATGAAATTTGTCTGCTTAGGATTTAATCCTTCCAACCAGGAAGCTAACGAGTCATTGGTTGATCCAGATGGCCTGAGTTGGCAGGTATTAAACTCAGCTTGGGAACGAGGGTTGATCACTTCTGGAGAGAATGCAATCTTTTGCTATGATAGAGAAAGGTACGAGAGATTGATTGAGATGGCAAAGCCCAGAAATGATCCTGATCACCGGCACTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTTCAGGGAAATGTTTGCCTGTCAGAATTGGATTTCTTCATCAAATGCATGCATGGTGAGATGACAGGGAATCTTTAA
Protein sequence

>Msa0760190

MKNTNEDATSTQDLDPQSDHSSDYLPQPQPRRLRGFAATAAGTNSTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVDADGTTYRQCLPPSNMGSFAARSVESQPSGGTLRTCSVKETLENQSPGLRVDECVSPASIDSVLIVERDSKNGNYASVSPINSTDCLEADQLMQDIHSGVHENDFNCTPYVPVYIKLPAGIINKFCQLMDPEGIRQELIHIKSLNIDGVVVDCWWGIVEGWNSQKYVWSGYRELFSIIREFKLNIQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGMIDAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLVDHADNVLSLANLAFEGTKIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLKKHAVTMKFVCLGFNPSNQEANESLVDPDGLSWQVLNSAWERGLITSGENAIFCYDRERYERLIEMAKPRNDPDHRHFSFFVYQQPSLLQGNVCLSELDFFIKCMHGEMTGNL*