Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760680 | sp|Q6AWY4|GRF5_ORYSJ | 35.758 | 330 | 157 | 9 | 64 | 365 | 25 | 327 | 2.03e-43 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760680 | G7K6W0 | 95.482 | 332 | 7 | 2 | 48 | 379 | 1 | 324 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0760680 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760680 | MtrunA17_Chr5g0409471 | 95.482 | 332 | 7 | 2 | 48 | 379 | 1 | 324 | 0.0 | 650 |
| Msa0760680 | MtrunA17_Chr4g0021261 | 47.418 | 213 | 77 | 9 | 63 | 262 | 25 | 215 | 7.00e-49 | 168 |
| Msa0760680 | MtrunA17_Chr4g0070591 | 34.058 | 276 | 146 | 7 | 63 | 307 | 9 | 279 | 4.99e-42 | 150 |
| Msa0760680 | MtrunA17_Chr2g0300511 | 60.177 | 113 | 29 | 2 | 63 | 159 | 7 | 119 | 7.53e-40 | 144 |
| Msa0760680 | MtrunA17_Chr8g0343881 | 58.333 | 108 | 33 | 2 | 64 | 159 | 12 | 119 | 1.65e-38 | 141 |
| Msa0760680 | MtrunA17_Chr1g0152191 | 56.897 | 116 | 34 | 2 | 63 | 162 | 144 | 259 | 2.54e-36 | 139 |
| Msa0760680 | MtrunA17_Chr7g0265931 | 62.037 | 108 | 29 | 4 | 64 | 159 | 79 | 186 | 2.08e-35 | 133 |
| Msa0760680 | MtrunA17_Chr3g0127641 | 53.000 | 100 | 39 | 2 | 61 | 159 | 110 | 202 | 9.19e-27 | 111 |
| Msa0760680 | MtrunA17_Chr8g0351521 | 47.619 | 105 | 43 | 2 | 62 | 161 | 53 | 150 | 1.01e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760680 | AT3G13960.1 | 57.273 | 110 | 35 | 2 | 62 | 159 | 15 | 124 | 6.00e-38 | 141 |
| Msa0760680 | AT4G37740.1 | 53.600 | 125 | 48 | 2 | 63 | 177 | 164 | 288 | 3.43e-37 | 141 |
| Msa0760680 | AT3G52910.1 | 56.250 | 112 | 33 | 3 | 64 | 159 | 83 | 194 | 3.97e-33 | 127 |
| Msa0760680 | AT2G36400.1 | 56.250 | 112 | 34 | 3 | 64 | 160 | 77 | 188 | 6.22e-33 | 127 |
| Msa0760680 | AT2G22840.1 | 57.944 | 107 | 35 | 2 | 63 | 159 | 133 | 239 | 2.65e-30 | 122 |
| Msa0760680 | AT2G06200.2 | 50.400 | 125 | 39 | 3 | 56 | 157 | 38 | 162 | 4.36e-30 | 117 |
| Msa0760680 | AT2G06200.1 | 52.066 | 121 | 35 | 3 | 60 | 157 | 3 | 123 | 7.50e-30 | 115 |
| Msa0760680 | AT4G24150.3 | 46.610 | 118 | 47 | 2 | 64 | 165 | 112 | 229 | 2.35e-23 | 101 |
| Msa0760680 | AT4G24150.2 | 46.610 | 118 | 47 | 2 | 64 | 165 | 150 | 267 | 5.76e-23 | 100 |
| Msa0760680 | AT5G53660.1 | 49.485 | 97 | 44 | 1 | 63 | 159 | 59 | 150 | 3.52e-22 | 97.1 |
| Msa0760680 | AT4G24150.1 | 37.762 | 143 | 48 | 1 | 64 | 165 | 150 | 292 | 1.31e-20 | 93.6 |
| Msa0760680 | AT2G45480.2 | 39.815 | 108 | 51 | 2 | 62 | 156 | 23 | 129 | 6.03e-17 | 81.3 |
| Msa0760680 | AT2G06200.3 | 72.917 | 48 | 11 | 1 | 112 | 157 | 4 | 51 | 8.67e-17 | 77.8 |
| Msa0760680 | AT2G45480.1 | 39.815 | 108 | 51 | 2 | 62 | 156 | 21 | 127 | 2.22e-16 | 80.5 |
| Msa0760680 | AT2G45480.1 | 36.458 | 96 | 48 | 3 | 68 | 163 | 269 | 351 | 1.18e-12 | 69.3 |
| Msa0760680 | AT2G45480.3 | 39.815 | 108 | 51 | 2 | 62 | 156 | 23 | 129 | 2.24e-16 | 80.5 |
| Msa0760680 | AT2G45480.3 | 36.458 | 96 | 48 | 3 | 68 | 163 | 271 | 353 | 1.22e-12 | 69.3 |
Find 98 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATGCTTCTTCCTCTTC+AGG | 0.174652 | 5_2:-17284383 | Msa0760680:CDS |
| CTTCTACACCTACCTGGTTC+TGG | 0.179105 | 5_2:+17284733 | None:intergenic |
| GGCTCAACTGGTTTCCTCTA+AGG | 0.291080 | 5_2:-17285224 | Msa0760680:CDS |
| AATGCAACAAATCAAGAAAA+AGG | 0.318694 | 5_2:+17282036 | None:intergenic |
| TTTGTTTCAGTGGGTTATTA+TGG | 0.331715 | 5_2:-17284769 | Msa0760680:intron |
| TTCTACACCTACCTGGTTCT+GGG | 0.343240 | 5_2:+17284734 | None:intergenic |
| GGTGAGGGAGGAGGAAAGGG+TGG | 0.357595 | 5_2:+17285193 | None:intergenic |
| GGGTGGGGAGCTTACCTTAG+AGG | 0.358982 | 5_2:+17285210 | None:intergenic |
| TTCCTAGATCCTTCTGTAAG+AGG | 0.359958 | 5_2:+17282569 | None:intergenic |
| GAAGGTTTAAGTTTCAATCT+TGG | 0.362165 | 5_2:-17284427 | Msa0760680:CDS |
| CCTATGCTTCTTCCTCTTCA+GGG | 0.369011 | 5_2:-17284382 | Msa0760680:CDS |
| AAGGTTTAAGTTTCAATCTT+GGG | 0.373864 | 5_2:-17284426 | Msa0760680:CDS |
| GGTTGTGGTGGTGGTGAGGG+AGG | 0.375922 | 5_2:+17285181 | None:intergenic |
| GATGTTCTAGCTCTTGCCAT+TGG | 0.387285 | 5_2:+17284970 | None:intergenic |
| TCCAAGGAAATTGTCTTTAA+CGG | 0.387679 | 5_2:-17282370 | Msa0760680:CDS |
| TTTACCAATGATGGCTCAAC+TGG | 0.388761 | 5_2:-17285236 | None:intergenic |
| GAGAGAAGAGACGGTGGTTG+TGG | 0.392939 | 5_2:+17285166 | None:intergenic |
| TTTCAATCAACATTGACATC+TGG | 0.399287 | 5_2:+17282223 | None:intergenic |
| TGAGGGAGGAGGAAAGGGTG+GGG | 0.407542 | 5_2:+17285195 | None:intergenic |
| CCTCCTCTGCAATGGAGTAT+AGG | 0.408064 | 5_2:-17282270 | Msa0760680:CDS |
| GGTGGTGAGGGAGGAGGAAA+GGG | 0.410748 | 5_2:+17285190 | None:intergenic |
| ATGTTCTAGCTCTTGCCATT+GGG | 0.417081 | 5_2:+17284971 | None:intergenic |
| GCCGTTAAAGACAATTTCCT+TGG | 0.422082 | 5_2:+17282369 | None:intergenic |
| CTCTCTTCAGTGACTGGCAG+TGG | 0.424103 | 5_2:-17282306 | Msa0760680:CDS |
| GGTGGTTGTGGTGGTGGTGA+GGG | 0.429607 | 5_2:+17285178 | None:intergenic |
| GTTCTCTTGTTGTTCGCTGT+TGG | 0.429758 | 5_2:+17282422 | None:intergenic |
| CGGTGGTTGTGGTGGTGGTG+AGG | 0.431472 | 5_2:+17285177 | None:intergenic |
| AGGGTTCTAAGAAACCTTAT+AGG | 0.432493 | 5_2:-17284363 | Msa0760680:intron |
| CTCAGTCTCTCTTCAGTGAC+TGG | 0.441726 | 5_2:-17282312 | Msa0760680:CDS |
| CCAGCTAGGTAGTTTGAAAC+AGG | 0.443147 | 5_2:-17282347 | Msa0760680:CDS |
| CTTGGTGCTGGTGGTTCTAG+TGG | 0.451681 | 5_2:-17284529 | Msa0760680:CDS |
| GTGAGGGAGGAGGAAAGGGT+GGG | 0.452048 | 5_2:+17285194 | None:intergenic |
| ACACTTCCTTTGCATACAAA+TGG | 0.453684 | 5_2:-17284457 | Msa0760680:CDS |
| CGGTCACAGTACTTAGAATC+AGG | 0.455848 | 5_2:+17284670 | None:intergenic |
| TGGTGGTGAGGGAGGAGGAA+AGG | 0.456820 | 5_2:+17285189 | None:intergenic |
| TGTGGTGGTGGTGAGGGAGG+AGG | 0.467729 | 5_2:+17285184 | None:intergenic |
| AGAGACGGTGGTTGTGGTGG+TGG | 0.472006 | 5_2:+17285172 | None:intergenic |
| CAAACACTGTTTCAGAATCA+AGG | 0.474671 | 5_2:-17282477 | Msa0760680:CDS |
| TGATGTTGAAAAGACTTCAT+AGG | 0.476193 | 5_2:+17282161 | None:intergenic |
| ATCTTCAAGTATCTGAAAGC+TGG | 0.478992 | 5_2:-17284939 | Msa0760680:CDS |
| GGTTATGACTTCACTTCAGA+TGG | 0.481110 | 5_2:-17282532 | Msa0760680:CDS |
| CGAATAGGTAAAAGGAGGTC+AGG | 0.485852 | 5_2:+17284903 | None:intergenic |
| TTGGTGTTAAAATCCTTGCT+TGG | 0.489894 | 5_2:+17282247 | None:intergenic |
| ATCAAGGAATTGTTCTTCCA+TGG | 0.491166 | 5_2:-17282461 | Msa0760680:CDS |
| ATCAACATTGACATCTGGAT+TGG | 0.498766 | 5_2:+17282228 | None:intergenic |
| AACCTCTTACAGAAGGATCT+AGG | 0.500686 | 5_2:-17282571 | Msa0760680:CDS |
| CTAGGAACTGTGAAGTATCA+AGG | 0.513671 | 5_2:-17282553 | Msa0760680:CDS |
| ATTCCACAGGCTTTCTTGAA+CGG | 0.519412 | 5_2:+17284626 | None:intergenic |
| CTGAAGAGAGACTGAGAGGA+TGG | 0.524331 | 5_2:+17282319 | None:intergenic |
| CCCTGAAGAGGAAGAAGCAT+AGG | 0.524973 | 5_2:+17284382 | None:intergenic |
| CCTGTTTCAAACTACCTAGC+TGG | 0.525039 | 5_2:+17282347 | None:intergenic |
| GCGTCGAGGTTAAACAGCTC+AGG | 0.529759 | 5_2:+17282400 | None:intergenic |
| ATTGTCTTTAACGGCCAGCT+AGG | 0.529877 | 5_2:-17282361 | Msa0760680:CDS |
| ACTTCACAGCAACTTGGTGC+TGG | 0.533655 | 5_2:-17284541 | Msa0760680:CDS |
| CATACAAATGGTACTCGTGA+AGG | 0.534280 | 5_2:-17284445 | Msa0760680:CDS |
| TCTGTTCTTCTACACCTACC+TGG | 0.541473 | 5_2:+17284727 | None:intergenic |
| CGAGTACCATTTGTATGCAA+AGG | 0.542113 | 5_2:+17284451 | None:intergenic |
| TCACAGCAACTTGGTGCTGG+TGG | 0.545124 | 5_2:-17284538 | Msa0760680:CDS |
| TAATAGGTTTGGACTGAACT+CGG | 0.548879 | 5_2:-17282608 | Msa0760680:intron |
| CCTATACTCCATTGCAGAGG+AGG | 0.551750 | 5_2:+17282270 | None:intergenic |
| TGGGAACACCATGCCCCACA+TGG | 0.552810 | 5_2:-17284407 | Msa0760680:CDS |
| ACAGTAGGAAAATTGAAGCT+TGG | 0.552947 | 5_2:+17282127 | None:intergenic |
| AGTACTACTTCACAGCAACT+TGG | 0.553505 | 5_2:-17284547 | Msa0760680:CDS |
| CATAGGGTCCATGTGGGGCA+TGG | 0.558053 | 5_2:+17284399 | None:intergenic |
| AGATTTAGCCTCCTCTGCAA+TGG | 0.559132 | 5_2:-17282278 | Msa0760680:CDS |
| TTCAACAACCGCCGTTGATG+TGG | 0.565403 | 5_2:-17285022 | Msa0760680:CDS |
| AGAAGAGACGGTGGTTGTGG+TGG | 0.566603 | 5_2:+17285169 | None:intergenic |
| TGCCATTGGGAGACTGTGAA+CGG | 0.571539 | 5_2:+17284984 | None:intergenic |
| ACTTCACTTCAGATGGGATG+TGG | 0.577262 | 5_2:-17282525 | Msa0760680:CDS |
| CCTCGACGCTGCAAGATCCA+AGG | 0.587152 | 5_2:-17282386 | Msa0760680:CDS |
| TCCTACTGTTCACTTGAAGG+AGG | 0.592033 | 5_2:-17282113 | Msa0760680:three_prime_UTR |
| GAAGAAGAAGAAGATTCCAC+AGG | 0.592735 | 5_2:+17284613 | None:intergenic |
| CCTTGGATCTTGCAGCGTCG+AGG | 0.593781 | 5_2:+17282386 | None:intergenic |
| TGGACTGAACTCGGAAGCAG+AGG | 0.606816 | 5_2:-17282599 | Msa0760680:CDS |
| TCCTCCTTCAAGTGAACAGT+AGG | 0.608836 | 5_2:+17282112 | None:intergenic |
| GTTATGACTTCACTTCAGAT+GGG | 0.610905 | 5_2:-17282531 | Msa0760680:CDS |
| CACCGTTCACAGTCTCCCAA+TGG | 0.611493 | 5_2:-17284986 | Msa0760680:CDS |
| GGAGAACAACCTCTTACAGA+AGG | 0.617644 | 5_2:-17282578 | Msa0760680:CDS |
| ACTGTGAACGGTGGATGAGT+TGG | 0.621139 | 5_2:+17284996 | None:intergenic |
| GGTAGGTGTAGAAGAACAGA+TGG | 0.627953 | 5_2:-17284724 | Msa0760680:CDS |
| GTCACTGAAGAGAGACTGAG+AGG | 0.628364 | 5_2:+17282315 | None:intergenic |
| GGTTTCTTAGAACCCTGAAG+AGG | 0.629209 | 5_2:+17284370 | None:intergenic |
| CCTGAAGAGGAAGAAGCATA+GGG | 0.630158 | 5_2:+17284383 | None:intergenic |
| AAGAAGCATAGGGTCCATGT+GGG | 0.631241 | 5_2:+17284393 | None:intergenic |
| GAAGAAGCATAGGGTCCATG+TGG | 0.633928 | 5_2:+17284392 | None:intergenic |
| TGAGTTGGTGACCACATCAA+CGG | 0.634344 | 5_2:+17285011 | None:intergenic |
| TCTTATGATTGTTAGACACA+TGG | 0.646895 | 5_2:-17281979 | Msa0760680:three_prime_UTR |
| GAAGTTGTAGTTGTCAACCA+TGG | 0.647831 | 5_2:+17282444 | None:intergenic |
| AATGGAGTATAGGCCAAGCA+AGG | 0.658290 | 5_2:-17282260 | Msa0760680:CDS |
| ATACCGTTCAAGAAAGCCTG+TGG | 0.663730 | 5_2:-17284629 | Msa0760680:CDS |
| AAATTGACCCAGAACCAGGT+AGG | 0.671324 | 5_2:-17284741 | Msa0760680:CDS |
| TGGCCTATACTCCATTGCAG+AGG | 0.676725 | 5_2:+17282267 | None:intergenic |
| TAGACACATGGTGTGATGTG+TGG | 0.686427 | 5_2:-17281967 | Msa0760680:three_prime_UTR |
| ATCGACGTCGAATCATATGA+CGG | 0.690045 | 5_2:+17284650 | None:intergenic |
| ATAGGTAAAAGGAGGTCAGG+AGG | 0.695933 | 5_2:+17284906 | None:intergenic |
| AGAAGCATAGGGTCCATGTG+GGG | 0.720767 | 5_2:+17284394 | None:intergenic |
| CATTGGGAGACTGTGAACGG+TGG | 0.744499 | 5_2:+17284987 | None:intergenic |
| GTTGGTGACCACATCAACGG+CGG | 0.749963 | 5_2:+17285014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGATTTTACTTTTTATA+AGG | - | chr5_2:17284242-17284261 | Msa0760680:intron | 10.0% |
| !!! | TTTTATATCTTTATGTTAGA+TGG | - | chr5_2:17283098-17283117 | Msa0760680:intron | 15.0% |
| !!! | ATACTTTATTTTATTCAACT+TGG | - | chr5_2:17283271-17283290 | Msa0760680:intron | 15.0% |
| !! | CAAATAGATATAAAATGAAA+TGG | + | chr5_2:17283844-17283863 | None:intergenic | 15.0% |
| !!! | CATTTCATTTTATATCTATT+TGG | - | chr5_2:17283842-17283861 | Msa0760680:intron | 15.0% |
| !!! | TGATATGATTTTTTAATTCT+AGG | - | chr5_2:17283865-17283884 | Msa0760680:intron | 15.0% |
| !!! | GTTTATTCTTTACTTTTAAA+TGG | - | chr5_2:17283963-17283982 | Msa0760680:intron | 15.0% |
| !! | AAAAAAGAAAAAAAGAGAAA+TGG | - | chr5_2:17284177-17284196 | Msa0760680:intron | 15.0% |
| !!! | GGATATTAATATTTTTATGA+AGG | - | chr5_2:17284291-17284310 | Msa0760680:intron | 15.0% |
| !!! | TATTAATATTTTTATGAAGG+TGG | - | chr5_2:17284294-17284313 | Msa0760680:intron | 15.0% |
| !! | ATCAAAATAGAGACAAAATA+AGG | + | chr5_2:17282305-17282324 | None:intergenic | 20.0% |
| !! | AAAAAAGAAACATACCTATA+AGG | + | chr5_2:17282779-17282798 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTTGTTTTCTATA+AGG | - | chr5_2:17282809-17282828 | Msa0760680:intron | 20.0% |
| !! | AATCAATTGTGTAAACAAAA+AGG | + | chr5_2:17283080-17283099 | None:intergenic | 20.0% |
| !!! | ACTTTATATTGTTTTGACAA+AGG | - | chr5_2:17283245-17283264 | Msa0760680:intron | 20.0% |
| !! | TGCAGAAATAATTACTTAAT+CGG | - | chr5_2:17283314-17283333 | Msa0760680:intron | 20.0% |
| !! | ATCGAATAAATAATGTGAAA+AGG | + | chr5_2:17283448-17283467 | None:intergenic | 20.0% |
| !!! | ACTTTTTATAAGGAATTTGT+AGG | - | chr5_2:17284252-17284271 | Msa0760680:intron | 20.0% |
| !!! | TTAAGTATTTTAGAAGTTGT+TGG | - | chr5_2:17284429-17284448 | Msa0760680:CDS | 20.0% |
| !! | CAAGTAGTTAAAAAAAATGA+TGG | - | chr5_2:17285199-17285218 | Msa0760680:CDS | 20.0% |
| !!! | TTTTGTTTTTGGGGTTTTTA+AGG | + | chr5_2:17282074-17282093 | None:intergenic | 25.0% |
| !!! | ATGCTCATGTTTTTGTTTTT+GGG | + | chr5_2:17282084-17282103 | None:intergenic | 25.0% |
| !!! | AATGCTCATGTTTTTGTTTT+TGG | + | chr5_2:17282085-17282104 | None:intergenic | 25.0% |
| !!! | TTTTGTGATTTTTGTTTCAG+TGG | - | chr5_2:17282346-17282365 | Msa0760680:CDS | 25.0% |
| !!! | TTTGTGATTTTTGTTTCAGT+GGG | - | chr5_2:17282347-17282366 | Msa0760680:CDS | 25.0% |
| !! | AAGGTTTAAGTTTCAATCTT+GGG | - | chr5_2:17282699-17282718 | Msa0760680:intron | 25.0% |
| !! | ATGTTTGTGTATTTGTGTTT+TGG | - | chr5_2:17282980-17282999 | Msa0760680:intron | 25.0% |
| !! | TGTTTGTGTATTTGTGTTTT+GGG | - | chr5_2:17282981-17283000 | Msa0760680:intron | 25.0% |
| ! | TTTATGTTAGATGGAAAACA+TGG | - | chr5_2:17283107-17283126 | Msa0760680:intron | 25.0% |
| ! | GCAGAAATAATTACTTAATC+GGG | - | chr5_2:17283315-17283334 | Msa0760680:intron | 25.0% |
| ! | AATAATTACTTAATCGGGTT+TGG | - | chr5_2:17283320-17283339 | Msa0760680:intron | 25.0% |
| ! | ATTTCAAATGACCATCAAAA+AGG | + | chr5_2:17283376-17283395 | None:intergenic | 25.0% |
| ! | TTTGATAAGATTGGAAATCA+AGG | - | chr5_2:17283518-17283537 | Msa0760680:intron | 25.0% |
| ! | TTGATAAGATTGGAAATCAA+GGG | - | chr5_2:17283519-17283538 | Msa0760680:intron | 25.0% |
| ! | TTAAGACTAAAGACAAATGT+CGG | + | chr5_2:17283650-17283669 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTTTCCTTTTCC+TGG | - | chr5_2:17284065-17284084 | Msa0760680:intron | 25.0% |
| !!! | AATGGATTAAACATTATAGC+AGG | - | chr5_2:17284195-17284214 | Msa0760680:intron | 25.0% |
| !!! | TGAATTGAGTTGAATCATTA+AGG | + | chr5_2:17284348-17284367 | None:intergenic | 25.0% |
| ! | TAATGATTCAACTCAATTCA+TGG | - | chr5_2:17284348-17284367 | Msa0760680:intron | 25.0% |
| ! | AATGCAACAAATCAAGAAAA+AGG | + | chr5_2:17285092-17285111 | None:intergenic | 25.0% |
| !!! | TGCTCATGTTTTTGTTTTTG+GGG | + | chr5_2:17282083-17282102 | None:intergenic | 30.0% |
| ! | AATTGAAGACTTTTCCGAAT+AGG | + | chr5_2:17282240-17282259 | None:intergenic | 30.0% |
| TAAGGAAGATTAACGTTGTT+GGG | + | chr5_2:17282287-17282306 | None:intergenic | 30.0% | |
| ATAAGGAAGATTAACGTTGT+TGG | + | chr5_2:17282288-17282307 | None:intergenic | 30.0% | |
| !! | TTTGTTTCAGTGGGTTATTA+TGG | - | chr5_2:17282356-17282375 | Msa0760680:CDS | 30.0% |
| ! | GAAGGTTTAAGTTTCAATCT+TGG | - | chr5_2:17282698-17282717 | Msa0760680:intron | 30.0% |
| ! | TTTTGTATAACCCTCTTGTT+CGG | - | chr5_2:17282845-17282864 | Msa0760680:intron | 30.0% |
| ! | GTTTGTGTATTTGTGTTTTG+GGG | - | chr5_2:17282982-17283001 | Msa0760680:intron | 30.0% |
| TAACTCTTCACAAGAAATCA+TGG | + | chr5_2:17283042-17283061 | None:intergenic | 30.0% | |
| AAGTTACATAACATGTGATG+TGG | - | chr5_2:17283143-17283162 | Msa0760680:intron | 30.0% | |
| !! | AAATCATGACTTGGTATTCT+GGG | - | chr5_2:17283392-17283411 | Msa0760680:intron | 30.0% |
| CACATTATTTATTCGATACC+TGG | - | chr5_2:17283451-17283470 | Msa0760680:intron | 30.0% | |
| TAGTTCACTCACATCTAAAA+AGG | + | chr5_2:17283487-17283506 | None:intergenic | 30.0% | |
| ATTGGAAATCAAGGGAATTA+TGG | - | chr5_2:17283527-17283546 | Msa0760680:intron | 30.0% | |
| CGATAGAGTTAAAGCAATTA+AGG | - | chr5_2:17283597-17283616 | Msa0760680:intron | 30.0% | |
| ! | TACTTGATGATTATCCAGAA+AGG | - | chr5_2:17283758-17283777 | Msa0760680:intron | 30.0% |
| ! | ACTTGATGATTATCCAGAAA+GGG | - | chr5_2:17283759-17283778 | Msa0760680:intron | 30.0% |
| ATTATGGGATAACATGTTGA+AGG | - | chr5_2:17283804-17283823 | Msa0760680:intron | 30.0% | |
| GATAACATGTTGAAGGAATT+TGG | - | chr5_2:17283811-17283830 | Msa0760680:intron | 30.0% | |
| TGTCATTGATACTATGTAGA+TGG | - | chr5_2:17284103-17284122 | Msa0760680:intron | 30.0% | |
| AGTTGAATCATTAAGGCTTA+AGG | + | chr5_2:17284341-17284360 | None:intergenic | 30.0% | |
| AAATTGCAAAAGACTACATG+TGG | + | chr5_2:17284404-17284423 | None:intergenic | 30.0% | |
| AACTGAACACACTCAATAAT+AGG | - | chr5_2:17284501-17284520 | Msa0760680:CDS | 30.0% | |
| AACACACTCAATAATAGGTT+TGG | - | chr5_2:17284506-17284525 | Msa0760680:CDS | 30.0% | |
| TCCAAGGAAATTGTCTTTAA+CGG | - | chr5_2:17284755-17284774 | Msa0760680:CDS | 30.0% | |
| TTTCAATCAACATTGACATC+TGG | + | chr5_2:17284905-17284924 | None:intergenic | 30.0% | |
| TGATGTTGAAAAGACTTCAT+AGG | + | chr5_2:17284967-17284986 | None:intergenic | 30.0% | |
| ! | ATGAAGTCTTTTCAACATCA+TGG | - | chr5_2:17284967-17284986 | Msa0760680:CDS | 30.0% |
| TCTTATGATTGTTAGACACA+TGG | - | chr5_2:17285146-17285165 | Msa0760680:intron | 30.0% | |
| GATTATAGAGAGAGAAGAGA+CGG | + | chr5_2:17281971-17281990 | None:intergenic | 35.0% | |
| AGAAGGATTGAATCTAGAAG+AGG | + | chr5_2:17282019-17282038 | None:intergenic | 35.0% | |
| ! | GATGATGATGATGATGAAGA+AGG | + | chr5_2:17282036-17282055 | None:intergenic | 35.0% |
| ATCTTCAAGTATCTGAAAGC+TGG | - | chr5_2:17282186-17282205 | Msa0760680:three_prime_UTR | 35.0% | |
| ! | TTTTCCGAATAGGTAAAAGG+AGG | + | chr5_2:17282230-17282249 | None:intergenic | 35.0% |
| ! | GACTTTTCCGAATAGGTAAA+AGG | + | chr5_2:17282233-17282252 | None:intergenic | 35.0% |
| AAAAAAATTGACCCAGAACC+AGG | - | chr5_2:17282380-17282399 | Msa0760680:CDS | 35.0% | |
| GAAGAACAGATGGCAAAAAA+TGG | - | chr5_2:17282411-17282430 | Msa0760680:CDS | 35.0% | |
| CAAAAAATGGAGATGTGCTA+GGG | - | chr5_2:17282424-17282443 | Msa0760680:CDS | 35.0% | |
| ACACTTCCTTTGCATACAAA+TGG | - | chr5_2:17282668-17282687 | Msa0760680:intron | 35.0% | |
| !! | AGGGTTCTAAGAAACCTTAT+AGG | - | chr5_2:17282762-17282781 | Msa0760680:intron | 35.0% |
| TTTGTATAACCCTCTTGTTC+GGG | - | chr5_2:17282846-17282865 | Msa0760680:intron | 35.0% | |
| ! | GGATTGAATTGCCTTTTTGA+TGG | - | chr5_2:17283362-17283381 | Msa0760680:intron | 35.0% |
| ! | GGTCATTTGAAATCATGACT+TGG | - | chr5_2:17283383-17283402 | Msa0760680:intron | 35.0% |
| !! | GAAATCATGACTTGGTATTC+TGG | - | chr5_2:17283391-17283410 | Msa0760680:intron | 35.0% |
| TTAGATGTGAGTGAACTAAG+AGG | - | chr5_2:17283489-17283508 | Msa0760680:intron | 35.0% | |
| TAGATGTGAGTGAACTAAGA+GGG | - | chr5_2:17283490-17283509 | Msa0760680:intron | 35.0% | |
| AGGGCATGATTTGATAAGAT+TGG | - | chr5_2:17283509-17283528 | Msa0760680:intron | 35.0% | |
| GAGTTAAAGCAATTAAGGAG+AGG | - | chr5_2:17283602-17283621 | Msa0760680:intron | 35.0% | |
| TAAAGACAAATGTCGGTAAG+TGG | + | chr5_2:17283643-17283662 | None:intergenic | 35.0% | |
| !! | ATAGCTTTGAGCTGGTATTA+TGG | - | chr5_2:17283788-17283807 | Msa0760680:intron | 35.0% |
| !! | TAGCTTTGAGCTGGTATTAT+GGG | - | chr5_2:17283789-17283808 | Msa0760680:intron | 35.0% |
| AGATGACGACATCTAATTGA+TGG | + | chr5_2:17283891-17283910 | None:intergenic | 35.0% | |
| AGTCAAACAAGAATGCAAGT+AGG | + | chr5_2:17283943-17283962 | None:intergenic | 35.0% | |
| TCAATGACAATGTCCATTGA+TGG | + | chr5_2:17284092-17284111 | None:intergenic | 35.0% | |
| ATGAAATGAACATGCTGTAG+TGG | - | chr5_2:17284128-17284147 | Msa0760680:intron | 35.0% | |
| TGAAATGAACATGCTGTAGT+GGG | - | chr5_2:17284129-17284148 | Msa0760680:intron | 35.0% | |
| ! | TTATAGCAGGAGTTGTGTTT+TGG | - | chr5_2:17284208-17284227 | Msa0760680:intron | 35.0% |
| TAAGGAATTTGTAGGATCTG+AGG | - | chr5_2:17284260-17284279 | Msa0760680:intron | 35.0% | |
| GTGTTCAGTTAACATCATGA+TGG | + | chr5_2:17284491-17284510 | None:intergenic | 35.0% | |
| TAATAGGTTTGGACTGAACT+CGG | - | chr5_2:17284517-17284536 | Msa0760680:CDS | 35.0% | |
| GTTATGACTTCACTTCAGAT+GGG | - | chr5_2:17284594-17284613 | Msa0760680:CDS | 35.0% | |
| CAAACACTGTTTCAGAATCA+AGG | - | chr5_2:17284648-17284667 | Msa0760680:CDS | 35.0% | |
| ATCAAGGAATTGTTCTTCCA+TGG | - | chr5_2:17284664-17284683 | Msa0760680:CDS | 35.0% | |
| !! | TTGGTGTTAAAATCCTTGCT+TGG | + | chr5_2:17284881-17284900 | None:intergenic | 35.0% |
| ATCAACATTGACATCTGGAT+TGG | + | chr5_2:17284900-17284919 | None:intergenic | 35.0% | |
| ACAGTAGGAAAATTGAAGCT+TGG | + | chr5_2:17285001-17285020 | None:intergenic | 35.0% | |
| ! | TTTTCCTACTGTTCACTTGA+AGG | - | chr5_2:17285009-17285028 | Msa0760680:CDS | 35.0% |
| !! | ATGTTCTAGCTCTTGCCATT+GGG | + | chr5_2:17282157-17282176 | None:intergenic | 40.0% |
| ! | CTGACCTCCTTTTACCTATT+CGG | - | chr5_2:17282223-17282242 | Msa0760680:exon | 40.0% |
| GCAAAAAATGGAGATGTGCT+AGG | - | chr5_2:17282423-17282442 | Msa0760680:CDS | 40.0% | |
| ATCGACGTCGAATCATATGA+CGG | + | chr5_2:17282478-17282497 | None:intergenic | 40.0% | |
| ATTCCACAGGCTTTCTTGAA+CGG | + | chr5_2:17282502-17282521 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGATTCCAC+AGG | + | chr5_2:17282515-17282534 | None:intergenic | 40.0% | |
| AGTACTACTTCACAGCAACT+TGG | - | chr5_2:17282578-17282597 | Msa0760680:CDS | 40.0% | |
| CGAGTACCATTTGTATGCAA+AGG | + | chr5_2:17282677-17282696 | None:intergenic | 40.0% | |
| CATACAAATGGTACTCGTGA+AGG | - | chr5_2:17282680-17282699 | Msa0760680:intron | 40.0% | |
| TTGTATAACCCTCTTGTTCG+GGG | - | chr5_2:17282847-17282866 | Msa0760680:intron | 40.0% | |
| GACCTTAGTAATCCAGAGTT+TGG | - | chr5_2:17282875-17282894 | Msa0760680:intron | 40.0% | |
| TTAGTAATCCAGAGTTTGGC+CGG | - | chr5_2:17282879-17282898 | Msa0760680:intron | 40.0% | |
| GATCCTTATCATGTGTGTGT+GGG | - | chr5_2:17283165-17283184 | Msa0760680:intron | 40.0% | |
| ATCCTTATCATGTGTGTGTG+GGG | - | chr5_2:17283166-17283185 | Msa0760680:intron | 40.0% | |
| ! | AAGTCATCTGGCCATAGTTT+TGG | - | chr5_2:17283210-17283229 | Msa0760680:intron | 40.0% |
| CAAGCCTAACTCCAAAACTA+TGG | + | chr5_2:17283224-17283243 | None:intergenic | 40.0% | |
| TACTTAATCGGGTTTGGCAT+TGG | - | chr5_2:17283326-17283345 | Msa0760680:intron | 40.0% | |
| !!! | GGCATTGGTAAGAGATTTTG+TGG | - | chr5_2:17283341-17283360 | Msa0760680:intron | 40.0% |
| TAAAAAGGCGAACAATGACC+AGG | + | chr5_2:17283472-17283491 | None:intergenic | 40.0% | |
| !! | TGTCTTTAGTCTTAACCCTC+CGG | - | chr5_2:17283655-17283674 | Msa0760680:intron | 40.0% |
| ! | GGTTAGTTATGACCAAACTC+CGG | + | chr5_2:17283707-17283726 | None:intergenic | 40.0% |
| GTTAGATGCTAGTTAGACGT+TGG | + | chr5_2:17283728-17283747 | None:intergenic | 40.0% | |
| CTGGATAATCATCAAGTAGC+AGG | + | chr5_2:17283756-17283775 | None:intergenic | 40.0% | |
| TGATGATTATCCAGAAAGGG+TGG | - | chr5_2:17283762-17283781 | Msa0760680:intron | 40.0% | |
| CAAACAAGAATGCAAGTAGG+AGG | + | chr5_2:17283940-17283959 | None:intergenic | 40.0% | |
| AATGGAACGCATTGTAGTCT+TGG | - | chr5_2:17283981-17284000 | Msa0760680:intron | 40.0% | |
| GTGTTCAATGCGATCTAACA+AGG | - | chr5_2:17284018-17284037 | Msa0760680:intron | 40.0% | |
| ! | GTAGGATCTGAGGTATGAAA+TGG | - | chr5_2:17284270-17284289 | Msa0760680:intron | 40.0% |
| CAACTCAATTCATGGCTACA+TGG | - | chr5_2:17284356-17284375 | Msa0760680:intron | 40.0% | |
| AACCTCTTACAGAAGGATCT+AGG | - | chr5_2:17284554-17284573 | Msa0760680:CDS | 40.0% | |
| TTCCTAGATCCTTCTGTAAG+AGG | + | chr5_2:17284559-17284578 | None:intergenic | 40.0% | |
| ! | CTAGGAACTGTGAAGTATCA+AGG | - | chr5_2:17284572-17284591 | Msa0760680:CDS | 40.0% |
| GGTTATGACTTCACTTCAGA+TGG | - | chr5_2:17284593-17284612 | Msa0760680:CDS | 40.0% | |
| GAAGTTGTAGTTGTCAACCA+TGG | + | chr5_2:17284684-17284703 | None:intergenic | 40.0% | |
| GCCGTTAAAGACAATTTCCT+TGG | + | chr5_2:17284759-17284778 | None:intergenic | 40.0% | |
| TATAGAGAGAGAAGAGACGG+TGG | + | chr5_2:17281968-17281987 | None:intergenic | 45.0% | |
| !! | TGAGTTGGTGACCACATCAA+CGG | + | chr5_2:17282117-17282136 | None:intergenic | 45.0% |
| !! | GATGTTCTAGCTCTTGCCAT+TGG | + | chr5_2:17282158-17282177 | None:intergenic | 45.0% |
| ATAGGTAAAAGGAGGTCAGG+AGG | + | chr5_2:17282222-17282241 | None:intergenic | 45.0% | |
| CGAATAGGTAAAAGGAGGTC+AGG | + | chr5_2:17282225-17282244 | None:intergenic | 45.0% | |
| GTTGTTGGGTACTTACGAGA+TGG | + | chr5_2:17282273-17282292 | None:intergenic | 45.0% | |
| AAATTGACCCAGAACCAGGT+AGG | - | chr5_2:17282384-17282403 | Msa0760680:CDS | 45.0% | |
| ! | TTCTACACCTACCTGGTTCT+GGG | + | chr5_2:17282394-17282413 | None:intergenic | 45.0% |
| TCTGTTCTTCTACACCTACC+TGG | + | chr5_2:17282401-17282420 | None:intergenic | 45.0% | |
| GGTAGGTGTAGAAGAACAGA+TGG | - | chr5_2:17282401-17282420 | Msa0760680:CDS | 45.0% | |
| CGGTCACAGTACTTAGAATC+AGG | + | chr5_2:17282458-17282477 | None:intergenic | 45.0% | |
| ATACCGTTCAAGAAAGCCTG+TGG | - | chr5_2:17282496-17282515 | Msa0760680:CDS | 45.0% | |
| ! | AAGAAGCATAGGGTCCATGT+GGG | + | chr5_2:17282735-17282754 | None:intergenic | 45.0% |
| ! | CCTGAAGAGGAAGAAGCATA+GGG | + | chr5_2:17282745-17282764 | None:intergenic | 45.0% |
| CCTATGCTTCTTCCTCTTCA+GGG | - | chr5_2:17282743-17282762 | Msa0760680:intron | 45.0% | |
| GGTTTCTTAGAACCCTGAAG+AGG | + | chr5_2:17282758-17282777 | None:intergenic | 45.0% | |
| TGTATAACCCTCTTGTTCGG+GGG | - | chr5_2:17282848-17282867 | Msa0760680:intron | 45.0% | |
| GGCCAAACTCTGGATTACTA+AGG | + | chr5_2:17282880-17282899 | None:intergenic | 45.0% | |
| TAGTAATCCAGAGTTTGGCC+GGG | - | chr5_2:17282880-17282899 | Msa0760680:intron | 45.0% | |
| !!! | TTTTGGGGTGTTTTGCCTTG+TGG | - | chr5_2:17282997-17283016 | Msa0760680:intron | 45.0% |
| !! | TTTGGGGTGTTTTGCCTTGT+GGG | - | chr5_2:17282998-17283017 | Msa0760680:intron | 45.0% |
| ! | TTTTGCCTTGTGGGGTTTTG+AGG | - | chr5_2:17283007-17283026 | Msa0760680:intron | 45.0% |
| CATTTCCTCAAAACCCCACA+AGG | + | chr5_2:17283015-17283034 | None:intergenic | 45.0% | |
| GGATCCTTATCATGTGTGTG+TGG | - | chr5_2:17283164-17283183 | Msa0760680:intron | 45.0% | |
| TGGGGTGAGATTTGAGAGTA+AGG | - | chr5_2:17283184-17283203 | Msa0760680:intron | 45.0% | |
| AGAGTAAGGTGCAAGTCATC+TGG | - | chr5_2:17283198-17283217 | Msa0760680:intron | 45.0% | |
| !!! | CTGGCCATAGTTTTGGAGTT+AGG | - | chr5_2:17283217-17283236 | Msa0760680:intron | 45.0% |
| AAGCTATGAACCACCCTTTC+TGG | + | chr5_2:17283775-17283794 | None:intergenic | 45.0% | |
| ! | TCCTTTTCCTGGTCCATCAA+TGG | - | chr5_2:17284076-17284095 | Msa0760680:intron | 45.0% |
| ! | TCCATTGATGGACCAGGAAA+AGG | + | chr5_2:17284080-17284099 | None:intergenic | 45.0% |
| ! | ACAATGTCCATTGATGGACC+AGG | + | chr5_2:17284086-17284105 | None:intergenic | 45.0% |
| AATTCATGGCTACATGGCCT+CGG | - | chr5_2:17284362-17284381 | Msa0760680:intron | 45.0% | |
| ! | GATCCTGATGTTTAAGACCG+AGG | + | chr5_2:17284382-17284401 | None:intergenic | 45.0% |
| GGAGAACAACCTCTTACAGA+AGG | - | chr5_2:17284547-17284566 | Msa0760680:CDS | 45.0% | |
| ACTTCACTTCAGATGGGATG+TGG | - | chr5_2:17284600-17284619 | Msa0760680:CDS | 45.0% | |
| !! | GTTCTCTTGTTGTTCGCTGT+TGG | + | chr5_2:17284706-17284725 | None:intergenic | 45.0% |
| ATTGTCTTTAACGGCCAGCT+AGG | - | chr5_2:17284764-17284783 | Msa0760680:intron | 45.0% | |
| CCTGTTTCAAACTACCTAGC+TGG | + | chr5_2:17284781-17284800 | None:intergenic | 45.0% | |
| ! | CCAGCTAGGTAGTTTGAAAC+AGG | - | chr5_2:17284778-17284797 | Msa0760680:intron | 45.0% |
| AGATTTAGCCTCCTCTGCAA+TGG | - | chr5_2:17284847-17284866 | Msa0760680:intron | 45.0% | |
| AATGGAGTATAGGCCAAGCA+AGG | - | chr5_2:17284865-17284884 | Msa0760680:intron | 45.0% | |
| TCCTACTGTTCACTTGAAGG+AGG | - | chr5_2:17285012-17285031 | Msa0760680:CDS | 45.0% | |
| TCCTCCTTCAAGTGAACAGT+AGG | + | chr5_2:17285016-17285035 | None:intergenic | 45.0% | |
| TAGACACATGGTGTGATGTG+TGG | - | chr5_2:17285158-17285177 | Msa0760680:intron | 45.0% | |
| ! | GGCTCAACTGGTTTCCTCTA+AGG | - | chr5_2:17281901-17281920 | Msa0760680:three_prime_UTR | 50.0% |
| TTCAACAACCGCCGTTGATG+TGG | - | chr5_2:17282103-17282122 | Msa0760680:three_prime_UTR | 50.0% | |
| ACTGTGAACGGTGGATGAGT+TGG | + | chr5_2:17282132-17282151 | None:intergenic | 50.0% | |
| TGCCATTGGGAGACTGTGAA+CGG | + | chr5_2:17282144-17282163 | None:intergenic | 50.0% | |
| CTTCTACACCTACCTGGTTC+TGG | + | chr5_2:17282395-17282414 | None:intergenic | 50.0% | |
| !! | ACTTCACAGCAACTTGGTGC+TGG | - | chr5_2:17282584-17282603 | Msa0760680:CDS | 50.0% |
| ! | AGAAGCATAGGGTCCATGTG+GGG | + | chr5_2:17282734-17282753 | None:intergenic | 50.0% |
| ! | GAAGAAGCATAGGGTCCATG+TGG | + | chr5_2:17282736-17282755 | None:intergenic | 50.0% |
| CCCTATGCTTCTTCCTCTTC+AGG | - | chr5_2:17282742-17282761 | Msa0760680:intron | 50.0% | |
| ! | CCCTGAAGAGGAAGAAGCAT+AGG | + | chr5_2:17282746-17282765 | None:intergenic | 50.0% |
| GTATAACCCTCTTGTTCGGG+GGG | - | chr5_2:17282849-17282868 | Msa0760680:intron | 50.0% | |
| GCCAGACTTTACTTACCTCC+CGG | + | chr5_2:17282901-17282920 | None:intergenic | 50.0% | |
| !! | TTGGGGTGTTTTGCCTTGTG+GGG | - | chr5_2:17282999-17283018 | Msa0760680:intron | 50.0% |
| CACCCCACACACACATGATA+AGG | + | chr5_2:17283171-17283190 | None:intergenic | 50.0% | |
| CTACCAGAGCCTCTTCTCTT+GGG | + | chr5_2:17283683-17283702 | None:intergenic | 50.0% | |
| ACTACCAGAGCCTCTTCTCT+TGG | + | chr5_2:17283684-17283703 | None:intergenic | 50.0% | |
| !! | GGTGGTTCATAGCTTTGAGC+TGG | - | chr5_2:17283780-17283799 | Msa0760680:intron | 50.0% |
| TGGCCTCGGTCTTAAACATC+AGG | - | chr5_2:17284376-17284395 | Msa0760680:CDS | 50.0% | |
| CTGAAGAGAGACTGAGAGGA+TGG | + | chr5_2:17284809-17284828 | None:intergenic | 50.0% | |
| GTCACTGAAGAGAGACTGAG+AGG | + | chr5_2:17284813-17284832 | None:intergenic | 50.0% | |
| CTCAGTCTCTCTTCAGTGAC+TGG | - | chr5_2:17284813-17284832 | Msa0760680:intron | 50.0% | |
| CCTATACTCCATTGCAGAGG+AGG | + | chr5_2:17284858-17284877 | None:intergenic | 50.0% | |
| CCTCCTCTGCAATGGAGTAT+AGG | - | chr5_2:17284855-17284874 | Msa0760680:intron | 50.0% | |
| TGGCCTATACTCCATTGCAG+AGG | + | chr5_2:17284861-17284880 | None:intergenic | 50.0% | |
| AGAAGAGACGGTGGTTGTGG+TGG | + | chr5_2:17281959-17281978 | None:intergenic | 55.0% | |
| GAGAGAAGAGACGGTGGTTG+TGG | + | chr5_2:17281962-17281981 | None:intergenic | 55.0% | |
| !! | GTTGGTGACCACATCAACGG+CGG | + | chr5_2:17282114-17282133 | None:intergenic | 55.0% |
| CATTGGGAGACTGTGAACGG+TGG | + | chr5_2:17282141-17282160 | None:intergenic | 55.0% | |
| CACCGTTCACAGTCTCCCAA+TGG | - | chr5_2:17282139-17282158 | Msa0760680:three_prime_UTR | 55.0% | |
| !! | TCACAGCAACTTGGTGCTGG+TGG | - | chr5_2:17282587-17282606 | Msa0760680:CDS | 55.0% |
| !! | CTTGGTGCTGGTGGTTCTAG+TGG | - | chr5_2:17282596-17282615 | Msa0760680:CDS | 55.0% |
| TAATCCAGAGTTTGGCCGGG+AGG | - | chr5_2:17282883-17282902 | Msa0760680:intron | 55.0% | |
| GCCGGGAGGTAAGTAAAGTC+TGG | - | chr5_2:17282897-17282916 | Msa0760680:intron | 55.0% | |
| CTCTTCTCTTGGGAACCGGA+GGG | + | chr5_2:17283673-17283692 | None:intergenic | 55.0% | |
| GAGCCTCTTCTCTTGGGAAC+CGG | + | chr5_2:17283677-17283696 | None:intergenic | 55.0% | |
| GTTCCCAAGAGAAGAGGCTC+TGG | - | chr5_2:17283677-17283696 | Msa0760680:intron | 55.0% | |
| ! | GAGAAGAGGCTCTGGTAGTC+CGG | - | chr5_2:17283685-17283704 | Msa0760680:intron | 55.0% |
| TGGACTGAACTCGGAAGCAG+AGG | - | chr5_2:17284526-17284545 | Msa0760680:CDS | 55.0% | |
| GCGTCGAGGTTAAACAGCTC+AGG | + | chr5_2:17284728-17284747 | None:intergenic | 55.0% | |
| CTCTCTTCAGTGACTGGCAG+TGG | - | chr5_2:17284819-17284838 | Msa0760680:intron | 55.0% | |
| GGGTGGGGAGCTTACCTTAG+AGG | + | chr5_2:17281918-17281937 | None:intergenic | 60.0% | |
| TGAGGGAGGAGGAAAGGGTG+GGG | + | chr5_2:17281933-17281952 | None:intergenic | 60.0% | |
| GTGAGGGAGGAGGAAAGGGT+GGG | + | chr5_2:17281934-17281953 | None:intergenic | 60.0% | |
| GGTGGTGAGGGAGGAGGAAA+GGG | + | chr5_2:17281938-17281957 | None:intergenic | 60.0% | |
| ! | TGGTGGTGAGGGAGGAGGAA+AGG | + | chr5_2:17281939-17281958 | None:intergenic | 60.0% |
| !! | GGTGGTTGTGGTGGTGGTGA+GGG | + | chr5_2:17281950-17281969 | None:intergenic | 60.0% |
| AGAGACGGTGGTTGTGGTGG+TGG | + | chr5_2:17281956-17281975 | None:intergenic | 60.0% | |
| TGGGAACACCATGCCCCACA+TGG | - | chr5_2:17282718-17282737 | Msa0760680:intron | 60.0% | |
| CATAGGGTCCATGTGGGGCA+TGG | + | chr5_2:17282729-17282748 | None:intergenic | 60.0% | |
| TAACCCTCTTGTTCGGGGGG+AGG | - | chr5_2:17282852-17282871 | Msa0760680:intron | 60.0% | |
| AACCCTCTTGTTCGGGGGGA+GGG | - | chr5_2:17282853-17282872 | Msa0760680:intron | 60.0% | |
| CTTACCTCCCGGCCAAACTC+TGG | + | chr5_2:17282890-17282909 | None:intergenic | 60.0% | |
| CCTCTTCTCTTGGGAACCGG+AGG | + | chr5_2:17283674-17283693 | None:intergenic | 60.0% | |
| CCTCCGGTTCCCAAGAGAAG+AGG | - | chr5_2:17283671-17283690 | Msa0760680:intron | 60.0% | |
| ! | GGCTCTGGTAGTCCGGAGTT+TGG | - | chr5_2:17283692-17283711 | Msa0760680:intron | 60.0% |
| CCTTGGATCTTGCAGCGTCG+AGG | + | chr5_2:17284742-17284761 | None:intergenic | 60.0% | |
| CCTCGACGCTGCAAGATCCA+AGG | - | chr5_2:17284739-17284758 | Msa0760680:CDS | 60.0% | |
| GGTGAGGGAGGAGGAAAGGG+TGG | + | chr5_2:17281935-17281954 | None:intergenic | 65.0% | |
| !! | TGTGGTGGTGGTGAGGGAGG+AGG | + | chr5_2:17281944-17281963 | None:intergenic | 65.0% |
| !! | GGTTGTGGTGGTGGTGAGGG+AGG | + | chr5_2:17281947-17281966 | None:intergenic | 65.0% |
| !! | CGGTGGTTGTGGTGGTGGTG+AGG | + | chr5_2:17281951-17281970 | None:intergenic | 65.0% |
| GTCCCTCCCCCCGAACAAGA+GGG | + | chr5_2:17282858-17282877 | None:intergenic | 65.0% | |
| GGTCCCTCCCCCCGAACAAG+AGG | + | chr5_2:17282859-17282878 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 17281899 | 17285248 | 17281899 | ID=Msa0760680;Name=Msa0760680 |
| chr5_2 | mRNA | 17281899 | 17285248 | 17281899 | ID=Msa0760680-mRNA-1;Parent=Msa0760680;Name=Msa0760680-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.66|0.5|1|1|1|4|326|379 |
| chr5_2 | exon | 17281899 | 17282624 | 17281899 | ID=Msa0760680-mRNA-1:exon:7661;Parent=Msa0760680-mRNA-1 |
| chr5_2 | exon | 17284364 | 17284781 | 17284364 | ID=Msa0760680-mRNA-1:exon:7660;Parent=Msa0760680-mRNA-1 |
| chr5_2 | exon | 17284871 | 17285121 | 17284871 | ID=Msa0760680-mRNA-1:exon:7659;Parent=Msa0760680-mRNA-1 |
| chr5_2 | exon | 17285178 | 17285248 | 17285178 | ID=Msa0760680-mRNA-1:exon:7658;Parent=Msa0760680-mRNA-1 |
| chr5_2 | CDS | 17285178 | 17285248 | 17285178 | ID=Msa0760680-mRNA-1:cds;Parent=Msa0760680-mRNA-1 |
| chr5_2 | CDS | 17284871 | 17285121 | 17284871 | ID=Msa0760680-mRNA-1:cds;Parent=Msa0760680-mRNA-1 |
| chr5_2 | CDS | 17284364 | 17284781 | 17284364 | ID=Msa0760680-mRNA-1:cds;Parent=Msa0760680-mRNA-1 |
| chr5_2 | CDS | 17282225 | 17282624 | 17282225 | ID=Msa0760680-mRNA-1:cds;Parent=Msa0760680-mRNA-1 |
| chr5_2 | three_prime_UTR | 17281899 | 17282224 | 17281899 | ID=Msa0760680-mRNA-1:three_prime_utr;Parent=Msa0760680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
