AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760790 MtrunA17_Chr5g0410881 96.614 502 13 1 1 498 1 502 0.0 994
Msa0760790 MtrunA17_Chr4g0039891 47.410 502 208 19 27 495 11 489 1.04e-125 375
Msa0760790 MtrunA17_Chr7g0260331 58.333 228 91 1 8 235 29 252 2.14e-88 275
Msa0760790 MtrunA17_Chr1g0204741 58.120 234 84 6 6 235 16 239 7.31e-83 259
Msa0760790 MtrunA17_Chr3g0135831 56.696 224 83 4 15 236 33 244 5.27e-82 259
Msa0760790 MtrunA17_Chr8g0392001 46.125 271 128 6 28 296 22 276 1.05e-66 219
Msa0760790 MtrunA17_Chr1g0185131 49.561 228 95 3 15 240 19 228 4.08e-66 216
Msa0760790 MtrunA17_Chr4g0071051 50.000 218 94 3 2 219 76 278 2.51e-65 217
Msa0760790 MtrunA17_Chr8g0379701 53.763 186 75 2 27 210 11 187 6.99e-64 213
Msa0760790 MtrunA17_Chr6g0467041 50.711 211 90 4 28 238 22 218 9.76e-64 210
Msa0760790 MtrunA17_Chr8g0378061 50.952 210 89 4 29 238 23 218 1.30e-62 212
Msa0760790 MtrunA17_Chr2g0330821 47.887 213 92 2 1 213 60 253 6.45e-61 203
Msa0760790 MtrunA17_Chr6g0485571 46.009 213 101 5 24 236 7 205 7.22e-55 187
Msa0760790 MtrunA17_Chr2g0284481 44.865 185 98 2 27 211 14 194 2.84e-51 179
Msa0760790 MtrunA17_Chr3g0134031 43.147 197 64 2 25 173 21 217 1.53e-45 163
Msa0760790 MtrunA17_Chr5g0397881 73.404 94 25 0 26 119 22 115 6.28e-45 161
Msa0760790 MtrunA17_Chr5g0441531 46.073 191 91 2 25 203 22 212 1.02e-43 155
Msa0760790 MtrunA17_Chr5g0402291 46.369 179 64 3 25 174 6 181 2.75e-42 152
Msa0760790 MtrunA17_Chr7g0257331 49.342 152 75 1 25 174 19 170 3.87e-42 150
Msa0760790 MtrunA17_Chr1g0203601 68.085 94 30 0 26 119 16 109 4.45e-42 152
Msa0760790 MtrunA17_Chr6g0472421 67.021 94 31 0 26 119 31 124 2.88e-40 148
Msa0760790 MtrunA17_Chr8g0375041 45.614 171 78 4 25 184 6 172 1.53e-38 141
Msa0760790 MtrunA17_Chr1g0179311 42.268 194 90 6 67 260 1 172 7.90e-36 136
Msa0760790 MtrunA17_Chr4g0047421 37.017 181 96 3 25 201 30 196 1.29e-32 123
Msa0760790 MtrunA17_Chr1g0179321 66.216 74 25 0 14 87 35 108 5.84e-28 107
Msa0760790 MtrunA17_Chr4g0023771 69.231 65 19 1 24 87 11 75 9.10e-26 101
Msa0760790 MtrunA17_Chr2g0330841 36.364 165 86 3 72 236 31 176 3.09e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760790 AT1G32330.1 53.816 511 169 14 4 492 9 474 5.28e-165 476
Msa0760790 AT1G32330.2 53.816 511 169 14 4 492 9 474 7.38e-165 475
Msa0760790 AT4G17750.1 48.964 531 186 15 1 497 16 495 3.73e-144 423
Msa0760790 AT5G16820.1 50.487 513 189 14 14 497 4 480 1.67e-137 405
Msa0760790 AT5G16820.2 50.487 513 189 14 14 497 4 480 1.67e-137 405
Msa0760790 AT3G02990.1 48.971 486 193 16 27 497 22 467 9.24e-125 372
Msa0760790 AT3G22830.1 57.080 226 96 1 10 235 43 267 1.17e-83 265
Msa0760790 AT2G26150.1 57.848 223 86 3 15 236 31 246 1.43e-82 259
Msa0760790 AT2G26150.4 57.848 223 86 3 15 236 31 246 1.43e-82 259
Msa0760790 AT3G51910.1 52.074 217 80 4 21 235 22 216 1.55e-68 221
Msa0760790 AT5G03720.2 46.800 250 122 3 10 259 37 275 8.75e-68 223
Msa0760790 AT5G03720.1 46.800 250 122 3 10 259 37 275 8.75e-68 223
Msa0760790 AT1G67970.1 53.125 192 82 3 28 218 19 203 1.17e-62 209
Msa0760790 AT4G13980.1 46.460 226 96 5 29 251 24 227 2.26e-62 211
Msa0760790 AT3G63350.1 45.045 222 111 1 1 222 1 211 7.81e-61 201
Msa0760790 AT5G43840.1 42.915 247 110 5 14 260 5 220 1.39e-59 198
Msa0760790 AT4G18880.1 45.540 213 107 2 21 230 8 214 5.34e-55 189
Msa0760790 AT5G45710.3 37.762 286 148 5 27 307 12 272 2.36e-53 184
Msa0760790 AT5G45710.1 37.762 286 148 5 27 307 12 272 2.36e-53 184
Msa0760790 AT3G24520.1 43.750 208 87 2 28 235 17 194 1.77e-52 181
Msa0760790 AT5G54070.1 43.519 216 101 3 28 239 71 269 4.70e-52 180
Msa0760790 AT1G46264.1 45.026 191 61 3 25 173 31 219 6.29e-45 161
Msa0760790 AT2G41690.1 42.473 186 83 2 26 191 38 219 3.01e-42 151
Msa0760790 AT2G26150.3 54.667 150 60 3 88 236 49 191 4.03e-42 152
Msa0760790 AT2G26150.2 54.667 150 60 3 88 236 49 191 4.03e-42 152
Msa0760790 AT4G11660.1 68.085 94 30 0 26 119 57 150 4.27e-41 152
Msa0760790 AT4G36990.1 56.557 122 40 1 25 146 11 119 1.47e-40 147
Msa0760790 AT5G62020.1 62.626 99 37 0 26 124 21 119 2.88e-40 147
Msa0760790 AT4G18870.1 47.727 88 46 0 28 115 146 233 2.88e-25 105
Msa0760790 AT4G18870.1 43.363 113 47 3 5 115 2 99 9.71e-23 98.6
Msa0760790 AT1G77570.1 42.222 90 49 2 29 115 27 116 1.57e-17 80.1
Msa0760790 AT4G19630.1 37.778 90 53 1 29 115 12 101 1.91e-13 67.8

Find 174 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTAAGCAATTCTATT+TGG 0.145481 5_2:-17398813 Msa0760790:CDS
TCGGTGTCGGCGCCGGTATT+TGG 0.178029 5_2:+17402433 None:intergenic
ACAATTAGAAAACAATAATT+TGG 0.194455 5_2:+17397928 None:intergenic
AAAATTTCAAACAGGGTTTC+AGG 0.206273 5_2:-17399869 Msa0760790:intron
CCAACAACAGTTTCGTTGTT+TGG 0.230125 5_2:-17402317 Msa0760790:CDS
TGTGTAGAAGTCGGCAAATT+TGG 0.235613 5_2:-17399693 Msa0760790:CDS
TGAGGTACAGATAGAATTTC+AGG 0.240310 5_2:+17399081 None:intergenic
CGAGACAGATGATGGATTTA+TGG 0.242553 5_2:-17398902 Msa0760790:CDS
TCACCAATCAAGTAATTATC+AGG 0.249130 5_2:+17399255 None:intergenic
CATAGATGATTAAATTCTTT+TGG 0.258523 5_2:+17398633 None:intergenic
ACCTCAAAATCCTCTGGATT+TGG 0.271461 5_2:+17398772 None:intergenic
CAAAAGGTCCCTAGCGAATT+CGG 0.275635 5_2:+17402287 None:intergenic
GAATAGGGGACAAGAGATTA+TGG 0.284987 5_2:+17402598 None:intergenic
TGGATCATTACCCATTGATT+TGG 0.296226 5_2:-17398866 Msa0760790:CDS
TTTGCTGTTTCATTCATCAT+AGG 0.311359 5_2:+17399339 None:intergenic
CAACAACAGTTTCGTTGTTT+GGG 0.319788 5_2:-17402316 Msa0760790:CDS
TTAATGTGGAAAAGTGAAAT+TGG 0.321148 5_2:+17402557 None:intergenic
CGGTGTCGGCGCCGGTATTT+GGG 0.322223 5_2:+17402434 None:intergenic
ACATATAAATGTGATCAAAA+TGG 0.327814 5_2:+17397901 None:intergenic
CTTCTTATGTAACTGATTTG+TGG 0.343000 5_2:-17398093 Msa0760790:three_prime_UTR
CAACAGATGCGATAGTTTCA+TGG 0.344788 5_2:-17402347 Msa0760790:CDS
AACCCTGATAATTACTTGAT+TGG 0.346275 5_2:-17399258 Msa0760790:CDS
GTCGTTGCTCCATTCCTTGA+AGG 0.347154 5_2:+17399553 None:intergenic
CCAATGTTATAGGAAATCTT+TGG 0.360135 5_2:-17398330 Msa0760790:intron
AAAACAAGAATTCTTCGAAA+TGG 0.362858 5_2:-17402487 Msa0760790:exon
GTGTAGAAGTCGGCAAATTT+GGG 0.362865 5_2:-17399692 Msa0760790:CDS
TATACCTGAAGACAATTATA+TGG 0.363191 5_2:-17398929 Msa0760790:CDS
ACATTACTCTGTTTAGTTGC+TGG 0.372084 5_2:-17398122 Msa0760790:three_prime_UTR
ACCAGGGCTTTGGACGGCTT+TGG 0.378818 5_2:+17399506 None:intergenic
TTTGCAAATTCCCAACGATC+TGG 0.381736 5_2:+17399837 None:intergenic
TTGAACTTGAAGGGAGAATA+GGG 0.382880 5_2:+17402583 None:intergenic
ATCACATTTATATGTTTAGT+TGG 0.386381 5_2:-17397893 Msa0760790:three_prime_UTR
TCAAATTTGGGAGTATGAAA+TGG 0.387128 5_2:-17397953 Msa0760790:three_prime_UTR
TCTGGTACTGAAGGTATATC+AGG 0.389774 5_2:+17398976 None:intergenic
TCTGCTCTGTTAGTTGATCC+AGG 0.390931 5_2:+17398677 None:intergenic
CAAATTTGGGCTTGAGGAAG+AGG 0.394429 5_2:-17399679 Msa0760790:CDS
ACTCAAATTCCAGTGTCAAC+AGG 0.398893 5_2:-17399135 Msa0760790:CDS
TTTGTTAAGCAATTCTATTT+GGG 0.398896 5_2:-17398812 Msa0760790:CDS
CTGATTTGTGGTGTTTCAAT+TGG 0.404882 5_2:-17398081 Msa0760790:three_prime_UTR
GAGCAAAGAAACCAGGGCTT+TGG 0.405473 5_2:+17399496 None:intergenic
TGCTAAGGAAGATCATGAAA+TGG 0.411880 5_2:-17399311 Msa0760790:CDS
GAGGTGCAGCCAACAGAAAA+TGG 0.412142 5_2:-17398721 Msa0760790:CDS
TATTTAACAATTTGTCCATC+AGG 0.412857 5_2:+17399366 None:intergenic
TCCCCAACTTGATGTTTCCT+TGG 0.422209 5_2:-17398272 Msa0760790:three_prime_UTR
CACCAAGGAAACATCAAGTT+GGG 0.424460 5_2:+17398270 None:intergenic
GGAGCCATATAATTGTCTTC+AGG 0.427662 5_2:+17398925 None:intergenic
ATTGAACTTGAAGGGAGAAT+AGG 0.428441 5_2:+17402582 None:intergenic
GTGCACTTGTCAGACACTTT+GGG 0.429146 5_2:+17398207 None:intergenic
TGGAATTGAATGCCACTAGA+TGG 0.429293 5_2:-17398033 Msa0760790:three_prime_UTR
CGTGCACTTGTCAGACACTT+TGG 0.432945 5_2:+17398206 None:intergenic
GCTTGAAGAACTTCGGCAAA+AGG 0.436166 5_2:+17402271 None:intergenic
ATCCAATGTCTGTCTAAAAC+AGG 0.437289 5_2:-17397869 Msa0760790:three_prime_UTR
AACAACAAAATGACAGCAAT+AGG 0.448374 5_2:-17399464 Msa0760790:CDS
GAAACTATCGCATCTGTTGA+AGG 0.449248 5_2:+17402351 None:intergenic
TGCAGCCAACAGAAAATGGC+TGG 0.460415 5_2:-17398717 Msa0760790:CDS
TGAAAGACAATCCAAATCAA+TGG 0.461549 5_2:+17398855 None:intergenic
GGCGCGTTCGCGTTTAGCAT+CGG 0.464774 5_2:+17402414 None:intergenic
ACAATGGTTCAGCGCCTTCA+AGG 0.468085 5_2:-17399567 Msa0760790:CDS
ACTCTCCCACAACATGTGTA+TGG 0.470144 5_2:+17397829 None:intergenic
GCTGAACCATTGTTTGCAGC+TGG 0.470479 5_2:+17399577 None:intergenic
GAAGGTTGACCCAGATCGTT+GGG 0.471844 5_2:-17399847 Msa0760790:CDS
CCATGGTCATACTCAACAAC+AGG 0.472356 5_2:-17399754 Msa0760790:CDS
CGTTGGGAATTTGCAAATGA+GGG 0.474986 5_2:-17399831 Msa0760790:CDS
GCTAAGGAAGATCATGAAAT+GGG 0.481953 5_2:-17399310 Msa0760790:CDS
ATGTTGACCTCAAAATCCTC+TGG 0.485435 5_2:+17398766 None:intergenic
GAAAGACAATCCAAATCAAT+GGG 0.486613 5_2:+17398856 None:intergenic
GCCAAAGCCGTCCAAAGCCC+TGG 0.488993 5_2:-17399507 Msa0760790:CDS
ATAACATCTGCTTGAGAAGT+CGG 0.493923 5_2:+17399003 None:intergenic
TGGCTGCACCTCATTCCCTC+TGG 0.494605 5_2:+17398732 None:intergenic
CCAAACAACGAAACTGTTGT+TGG 0.495551 5_2:+17402317 None:intergenic
TTTAGCATCGGTGTCGGCGC+CGG 0.495901 5_2:+17402426 None:intergenic
CGAAATATCCAGAGGGAATG+AGG 0.497477 5_2:-17398740 Msa0760790:CDS
CCTTGAGTCCCTGTTGACAC+TGG 0.498243 5_2:+17399126 None:intergenic
AAGAATGAGATAAAAGAGAA+TGG 0.499152 5_2:-17398053 Msa0760790:three_prime_UTR
AAAAGGTCCCTAGCGAATTC+GGG 0.501028 5_2:+17402288 None:intergenic
TAACATCTGCTTGAGAAGTC+GGG 0.501630 5_2:+17399004 None:intergenic
GGGACCCACCCGAATTCGCT+AGG 0.503998 5_2:-17402296 Msa0760790:CDS
AGCTCTACAAGCTGGAACTC+GGG 0.505067 5_2:-17399198 Msa0760790:CDS
ACTTGATGTTTCCTTGGTGA+TGG 0.506863 5_2:-17398266 Msa0760790:three_prime_UTR
CATAAATCCATCATCTGTCT+CGG 0.507108 5_2:+17398903 None:intergenic
CAAATCATCAATGTCTGCAC+CGG 0.507465 5_2:+17398831 None:intergenic
TCGTTGGGAATTTGCAAATG+AGG 0.508434 5_2:-17399832 Msa0760790:CDS
CTGCTCTGTTAGTTGATCCA+GGG 0.508669 5_2:+17398678 None:intergenic
TGAGTAGACTGCACTGAAGA+TGG 0.510797 5_2:+17399153 None:intergenic
TTCGCGTTTAGCATCGGTGT+CGG 0.511333 5_2:+17402420 None:intergenic
TTTATGGATCCGAGTTCACT+TGG 0.511418 5_2:-17398886 Msa0760790:CDS
TTGCAAATTCCCAACGATCT+GGG 0.513798 5_2:+17399838 None:intergenic
CAAGAATTCTTCGAAATGGA+TGG 0.514936 5_2:-17402483 Msa0760790:exon
TTGTTATGCTTGAAGAACTT+CGG 0.516006 5_2:+17402264 None:intergenic
GATGGAGCAAGCGGCGGAGA+GGG 0.517366 5_2:-17402465 Msa0760790:CDS
TTGAAGATTTACACAAGGAC+GGG 0.518670 5_2:-17398171 Msa0760790:three_prime_UTR
TCTGCAAATGTTATGAAGGA+TGG 0.520402 5_2:-17399048 Msa0760790:CDS
GGCTTTGGACGGCTTTGGCA+AGG 0.521460 5_2:+17399511 None:intergenic
GGTTCAGCGCCTTCAAGGAA+TGG 0.521472 5_2:-17399562 Msa0760790:CDS
GGATCAACTAACAGAGCAGA+TGG 0.526736 5_2:-17398674 Msa0760790:CDS
TTACACAAGGACGGGAACAT+TGG 0.527480 5_2:-17398163 Msa0760790:three_prime_UTR
ATGGCTCCCGAGACAGATGA+TGG 0.528224 5_2:-17398910 Msa0760790:CDS
GGAAGGTTGACCCAGATCGT+TGG 0.529784 5_2:-17399848 Msa0760790:CDS
TAGCTCTACAAGCTGGAACT+CGG 0.530135 5_2:-17399199 Msa0760790:CDS
CTTGATGTTTCCTTGGTGAT+GGG 0.530241 5_2:-17398265 Msa0760790:three_prime_UTR
TCACCAAGGAAACATCAAGT+TGG 0.532484 5_2:+17398269 None:intergenic
TGTTTGCAGCTGGCCGTCAG+TGG 0.533443 5_2:+17399587 None:intergenic
TTGACCTTTCATACTGTCCA+AGG 0.543763 5_2:-17398601 Msa0760790:intron
AACAATTTGTCCATCAGGAG+GGG 0.543951 5_2:+17399371 None:intergenic
ATAAATCCATCATCTGTCTC+GGG 0.544485 5_2:+17398904 None:intergenic
GGACAATAATACTCAGCCCC+TGG 0.544550 5_2:-17398695 Msa0760790:CDS
CTCAAATTCCAGTGTCAACA+GGG 0.545676 5_2:-17399134 Msa0760790:CDS
TAACAATTTGTCCATCAGGA+GGG 0.546075 5_2:+17399370 None:intergenic
GGGTTCAACCACCCAAATAC+CGG 0.548137 5_2:-17402445 Msa0760790:CDS
GAGCAAGCTACCCCTCCTGA+TGG 0.552465 5_2:-17399381 Msa0760790:CDS
GCTACTACTGTCCATTGCAC+TGG 0.552846 5_2:+17399218 None:intergenic
GATAATTACTTGATTGGTGA+TGG 0.554314 5_2:-17399252 Msa0760790:CDS
TGCTCTGTTAGTTGATCCAG+GGG 0.555861 5_2:+17398679 None:intergenic
CTACTGTCCATTGCACTGGA+TGG 0.557158 5_2:+17399222 None:intergenic
ATGGACAGAGTTCATCAGTA+GGG 0.560915 5_2:-17399719 Msa0760790:CDS
TTGAATGCCACTAGATGGAA+TGG 0.561211 5_2:-17398028 Msa0760790:three_prime_UTR
TTTGCAGATGCTGCAGCTTG+AGG 0.562895 5_2:+17399063 None:intergenic
AAACAGCAAAAGCAATGCTA+AGG 0.565264 5_2:-17399326 Msa0760790:CDS
TTTGAAGATTTACACAAGGA+CGG 0.567367 5_2:-17398172 Msa0760790:three_prime_UTR
CCAGTGTCAACAGGGACTCA+AGG 0.569636 5_2:-17399126 Msa0760790:CDS
TTTCAAACAGGGTTTCAGGA+AGG 0.570624 5_2:-17399865 Msa0760790:intron
GGTAATGATCCAAGTGAACT+CGG 0.570835 5_2:+17398877 None:intergenic
GATTTGGATTGTCTTTCACC+CGG 0.577390 5_2:-17398850 Msa0760790:CDS
GGCTTGAGGAAGAGGTTGAG+AGG 0.577943 5_2:-17399671 Msa0760790:CDS
GGCACAATCTCTGGTACTGA+AGG 0.579818 5_2:+17398967 None:intergenic
TTAACAATTTGTCCATCAGG+AGG 0.580490 5_2:+17399369 None:intergenic
CACCAATCAAGTAATTATCA+GGG 0.580602 5_2:+17399256 None:intergenic
AGCATCTGCAAATGTTATGA+AGG 0.585668 5_2:-17399052 Msa0760790:CDS
TGTCGGCGCCGGTATTTGGG+TGG 0.587096 5_2:+17402437 None:intergenic
AGGTCCCTAGCGAATTCGGG+TGG 0.590111 5_2:+17402291 None:intergenic
TACTTCACCATCCAGTGCAA+TGG 0.590271 5_2:-17399229 Msa0760790:CDS
CATGGACAGAGTTCATCAGT+AGG 0.591063 5_2:-17399720 Msa0760790:CDS
ACAAACTGAGCAAAGAAACC+AGG 0.596219 5_2:+17399489 None:intergenic
GGACCCACCCGAATTCGCTA+GGG 0.598350 5_2:-17402295 Msa0760790:CDS
TGTTGAGTATGACCATGGGC+AGG 0.599305 5_2:+17399759 None:intergenic
CAACAGGCTCAGCAACCGCA+TGG 0.606577 5_2:-17399738 Msa0760790:CDS
AAAGAAACCAGGGCTTTGGA+CGG 0.607667 5_2:+17399500 None:intergenic
AGTCGGCAAATTTGGGCTTG+AGG 0.610170 5_2:-17399685 Msa0760790:CDS
CTAGGTACCATTCCATCTAG+TGG 0.611218 5_2:+17398021 None:intergenic
TTCTCATGCAAGAGCTTGTG+AGG 0.613430 5_2:-17399629 Msa0760790:CDS
ACAGTAGTAGCTCTACAAGC+TGG 0.613534 5_2:-17399206 Msa0760790:CDS
ATTACCTTGGACAGTATGAA+AGG 0.614492 5_2:+17398597 None:intergenic
GTAGGGGCATGTGTAGAAGT+CGG 0.619207 5_2:-17399702 Msa0760790:CDS
CAGCAGCAACAAACCACTGA+CGG 0.620232 5_2:-17399600 Msa0760790:CDS
TTCGAAATGGATGGAGCAAG+CGG 0.623140 5_2:-17402474 Msa0760790:exon
AAATTGGTGATTGAACTTGA+AGG 0.626120 5_2:+17402573 None:intergenic
AAGCGTCGGCTCAAGCAGGA+TGG 0.626260 5_2:-17399420 Msa0760790:CDS
AAATCATCAATGTCTGCACC+GGG 0.630153 5_2:+17398832 None:intergenic
TGAACTTGAAGGGAGAATAG+GGG 0.633609 5_2:+17402584 None:intergenic
TTTGAGCAAAACTTATGACA+TGG 0.634177 5_2:-17402382 Msa0760790:CDS
GCAGCCAACAGAAAATGGCT+GGG 0.636582 5_2:-17398716 Msa0760790:CDS
AATTGGTGATTGAACTTGAA+GGG 0.637491 5_2:+17402574 None:intergenic
GATCAACTAACAGAGCAGAT+GGG 0.641177 5_2:-17398673 Msa0760790:CDS
CTCGGGAGTAACTCTTCAAG+AGG 0.645660 5_2:-17399181 Msa0760790:CDS
TGACGGCCAGCTGCAAACAA+TGG 0.646370 5_2:-17399583 Msa0760790:CDS
CCTGTTGTTGAGTATGACCA+TGG 0.647258 5_2:+17399754 None:intergenic
GGATGGAGCAAGCGGCGGAG+AGG 0.650098 5_2:-17402466 Msa0760790:CDS
ACATTGACGAAATATCCAGA+GGG 0.657011 5_2:-17398747 Msa0760790:CDS
TGGACAGAGTTCATCAGTAG+GGG 0.659673 5_2:-17399718 Msa0760790:CDS
GGGGTGAAATAAGTATCACT+AGG 0.661293 5_2:+17398003 None:intergenic
TCTGCAAACTCCAAATCCAG+AGG 0.662021 5_2:-17398782 Msa0760790:CDS
ACCAAGGAAACATCAAGTTG+GGG 0.663101 5_2:+17398271 None:intergenic
AGTCGAAGAAAACCTGCCCA+TGG 0.665848 5_2:-17399771 Msa0760790:CDS
CAAACTGAGCAAAGAAACCA+GGG 0.668272 5_2:+17399490 None:intergenic
GGTCCCTAGCGAATTCGGGT+GGG 0.673393 5_2:+17402292 None:intergenic
CTGTTGTTGAGTATGACCAT+GGG 0.673452 5_2:+17399755 None:intergenic
TTACTTTGAAGATTTACACA+AGG 0.678914 5_2:-17398176 Msa0760790:three_prime_UTR
AACATTGACGAAATATCCAG+AGG 0.685850 5_2:-17398748 Msa0760790:CDS
GAAATGGATGGAGCAAGCGG+CGG 0.691235 5_2:-17402471 Msa0760790:CDS
GAGCAAAACTTATGACATGG+TGG 0.697463 5_2:-17402379 Msa0760790:CDS
GTAGACTGCACTGAAGATGG+AGG 0.697646 5_2:+17399156 None:intergenic
ACTGATGAACTCTGTCCATG+CGG 0.724135 5_2:+17399723 None:intergenic
TTATTGAAAGATTCTACACG+CGG 0.735179 5_2:+17399282 None:intergenic
AGTGTCTGACAAGTGCACGT+TGG 0.739192 5_2:-17398202 Msa0760790:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAAATTAAATCAAATT+TGG - chr5_2:17402515-17402534 Msa0760790:five_prime_UTR 10.0%
!! TGAAAAATTAAATCAAATTT+GGG - chr5_2:17402516-17402535 Msa0760790:five_prime_UTR 10.0%
!!! GATTTTGATTTTTTTTAATG+TGG + chr5_2:17397941-17397960 None:intergenic 15.0%
!! TATATATATTATAGTATGCA+AGG - chr5_2:17399262-17399281 Msa0760790:CDS 15.0%
!! TTACAAAAATTGAAAAATGT+AGG + chr5_2:17399470-17399489 None:intergenic 15.0%
!!! AGTATTTTTCTTATAATTTG+AGG - chr5_2:17399762-17399781 Msa0760790:CDS 15.0%
!!! TTTTCAAAAACAAAAATAGT+GGG + chr5_2:17402502-17402521 None:intergenic 15.0%
!!! TTTTTCAAAAACAAAAATAG+TGG + chr5_2:17402503-17402522 None:intergenic 15.0%
!! ACAATTAGAAAACAATAATT+TGG + chr5_2:17402556-17402575 None:intergenic 15.0%
!!! AAAATCAAAATCACTCTTTT+AGG - chr5_2:17397949-17397968 Msa0760790:three_prime_UTR 20.0%
!!! AAATCAAAATCACTCTTTTA+GGG - chr5_2:17397950-17397969 Msa0760790:three_prime_UTR 20.0%
!!! AAAGTGTTTAATTTACTTTG+TGG - chr5_2:17398420-17398439 Msa0760790:intron 20.0%
!!! AAGTGTTTAATTTACTTTGT+GGG - chr5_2:17398421-17398440 Msa0760790:intron 20.0%
!!! TTGATGTTTTTGTTAATTTG+TGG - chr5_2:17398461-17398480 Msa0760790:intron 20.0%
!!! TGATGTTTTTGTTAATTTGT+GGG - chr5_2:17398462-17398481 Msa0760790:intron 20.0%
!! AAAAAAATGATTGTGAGAAT+GGG + chr5_2:17398778-17398797 None:intergenic 20.0%
!! AAAAAAAATGATTGTGAGAA+TGG + chr5_2:17398779-17398798 None:intergenic 20.0%
!!! TTCTCACAATCATTTTTTTT+TGG - chr5_2:17398779-17398798 Msa0760790:CDS 20.0%
!!! TCTCACAATCATTTTTTTTT+GGG - chr5_2:17398780-17398799 Msa0760790:CDS 20.0%
!!! ATCTCTTTCATTTTAATTGA+AGG + chr5_2:17399038-17399057 None:intergenic 20.0%
!! TCAATTAAAATGAAAGAGAT+AGG - chr5_2:17399038-17399057 Msa0760790:CDS 20.0%
!! CAATTAAAATGAAAGAGATA+GGG - chr5_2:17399039-17399058 Msa0760790:CDS 20.0%
!! CATTGTATATTCAATATCAA+AGG - chr5_2:17399237-17399256 Msa0760790:CDS 20.0%
!!! ATTATTATGAAGAGGATTTT+AGG - chr5_2:17399299-17399318 Msa0760790:CDS 20.0%
!!! TTATTATGAAGAGGATTTTA+GGG - chr5_2:17399300-17399319 Msa0760790:CDS 20.0%
!!! AAAACTTTAGCTTTTTGTTA+TGG - chr5_2:17400114-17400133 Msa0760790:intron 20.0%
!! TTATGGAAAATAAACTTTCT+TGG - chr5_2:17400131-17400150 Msa0760790:intron 20.0%
!!! ATTTTATAGGAAAAATAGTC+AGG + chr5_2:17400597-17400616 None:intergenic 20.0%
!! TTTCCTATAAAATTTCAAAC+AGG - chr5_2:17400604-17400623 Msa0760790:intron 20.0%
!! TTCCTATAAAATTTCAAACA+GGG - chr5_2:17400605-17400624 Msa0760790:intron 20.0%
!!! ATTTGTTAAGCAATTCTATT+TGG - chr5_2:17401668-17401687 Msa0760790:intron 20.0%
!! TTTGTTAAGCAATTCTATTT+GGG - chr5_2:17401669-17401688 Msa0760790:intron 20.0%
!!! CATAGATGATTAAATTCTTT+TGG + chr5_2:17401851-17401870 None:intergenic 20.0%
!!! AATCTAATTTTCTTTTTCTG+TGG - chr5_2:17402026-17402045 Msa0760790:intron 20.0%
!!! AAAACAAGTTATGAACTTTT+TGG - chr5_2:17402077-17402096 Msa0760790:intron 20.0%
!! TTTCAAAAACAAAAATAGTG+GGG + chr5_2:17402501-17402520 None:intergenic 20.0%
!! ACATATAAATGTGATCAAAA+TGG + chr5_2:17402583-17402602 None:intergenic 20.0%
!! ATCACATTTATATGTTTAGT+TGG - chr5_2:17402588-17402607 Msa0760790:five_prime_UTR 20.0%
!!! ATTTATTGATTTTGTGTGTG+GGG + chr5_2:17397863-17397882 None:intergenic 25.0%
!!! GATTTATTGATTTTGTGTGT+GGG + chr5_2:17397864-17397883 None:intergenic 25.0%
! TTAATGTGGAAAAGTGAAAT+TGG + chr5_2:17397927-17397946 None:intergenic 25.0%
! AAAACAAGAATTCTTCGAAA+TGG - chr5_2:17397994-17398013 Msa0760790:three_prime_UTR 25.0%
!! TCATAAGTTTTGCTCAAAAA+CGG + chr5_2:17398097-17398116 None:intergenic 25.0%
!!! CACTCTTTTAACTCTTTTAA+CGG - chr5_2:17398296-17398315 Msa0760790:three_prime_UTR 25.0%
!!! ATTTCGTTTGATTTGAGTTT+TGG - chr5_2:17398326-17398345 Msa0760790:intron 25.0%
!! AGTGTTTAATTTACTTTGTG+GGG - chr5_2:17398422-17398441 Msa0760790:intron 25.0%
! TTTGATCTATGATTATACTG+TGG - chr5_2:17398489-17398508 Msa0760790:intron 25.0%
!! GATTTTTGAACTGTTTGTTT+TGG - chr5_2:17398548-17398567 Msa0760790:intron 25.0%
!!! TGTTTTGGTGAAATATAATG+AGG - chr5_2:17398563-17398582 Msa0760790:intron 25.0%
!!! CTCACAATCATTTTTTTTTG+GGG - chr5_2:17398781-17398800 Msa0760790:CDS 25.0%
! ATGACACTAAATGATAAAGA+GGG + chr5_2:17398824-17398843 None:intergenic 25.0%
! AGTAAATTTCCTTACTTTCA+CGG + chr5_2:17399011-17399030 None:intergenic 25.0%
! GTTAATCAGTTACTTGATTA+TGG - chr5_2:17399200-17399219 Msa0760790:CDS 25.0%
! GATATTGAATATACAATGCA+TGG + chr5_2:17399235-17399254 None:intergenic 25.0%
!! TTTTGTAAGAAGAATGATGA+AGG - chr5_2:17399482-17399501 Msa0760790:CDS 25.0%
! GATACAGTATGTATTCAATT+TGG - chr5_2:17399539-17399558 Msa0760790:CDS 25.0%
! AATGTAGTTTATGATACGAT+AGG - chr5_2:17399582-17399601 Msa0760790:CDS 25.0%
! GCTTTATAATTAACTGCTTT+AGG - chr5_2:17399633-17399652 Msa0760790:CDS 25.0%
!!! TCCTTTTTTAAGAGGATAAT+AGG - chr5_2:17399866-17399885 Msa0760790:intron 25.0%
! TCCTATTATCCTCTTAAAAA+AGG + chr5_2:17399870-17399889 None:intergenic 25.0%
! TATGATAAATTCATAGCAAG+TGG + chr5_2:17399904-17399923 None:intergenic 25.0%
! ATTGATTGTATCAAAACACT+AGG - chr5_2:17399924-17399943 Msa0760790:intron 25.0%
! GTTAAGGTTCAAAAGATAAA+TGG + chr5_2:17400222-17400241 None:intergenic 25.0%
! CTTTATTGTCAACTTAGTTA+AGG + chr5_2:17400238-17400257 None:intergenic 25.0%
! TAAAATATCAGCACTCAATT+TGG - chr5_2:17400335-17400354 Msa0760790:intron 25.0%
! AAAAAGAGAGAAGACAATTA+AGG + chr5_2:17400496-17400515 None:intergenic 25.0%
!!! TCGAAAGTTGTGTTTTTTTA+TGG - chr5_2:17400555-17400574 Msa0760790:intron 25.0%
!!! AACCCTGTTTGAAATTTTAT+AGG + chr5_2:17400610-17400629 None:intergenic 25.0%
! TATTTAACAATTTGTCCATC+AGG + chr5_2:17401118-17401137 None:intergenic 25.0%
!! GGTATATCAAGAATACTTTT+AGG + chr5_2:17401538-17401557 None:intergenic 25.0%
! TATACCTGAAGACAATTATA+TGG - chr5_2:17401552-17401571 Msa0760790:intron 25.0%
!!! TCATCACTTGTGTATTTTTT+GGG + chr5_2:17401916-17401935 None:intergenic 25.0%
!!! ATCATCACTTGTGTATTTTT+TGG + chr5_2:17401917-17401936 None:intergenic 25.0%
!! TTACTTTGAAGATTTACACA+AGG - chr5_2:17402305-17402324 Msa0760790:CDS 25.0%
! AAGAATGAGATAAAAGAGAA+TGG - chr5_2:17402428-17402447 Msa0760790:CDS 25.0%
! TTCAAAAACAAAAATAGTGG+GGG + chr5_2:17402500-17402519 None:intergenic 25.0%
!!! GGATTTATTGATTTTGTGTG+TGG + chr5_2:17397865-17397884 None:intergenic 30.0%
! AATTGGTGATTGAACTTGAA+GGG + chr5_2:17397910-17397929 None:intergenic 30.0%
! AAATTGGTGATTGAACTTGA+AGG + chr5_2:17397911-17397930 None:intergenic 30.0%
TTTGAGCAAAACTTATGACA+TGG - chr5_2:17398099-17398118 Msa0760790:three_prime_UTR 30.0%
TTGTTATGCTTGAAGAACTT+CGG + chr5_2:17398220-17398239 None:intergenic 30.0%
! TTATACTGTGGATGTTGATT+TGG - chr5_2:17398501-17398520 Msa0760790:intron 30.0%
!! TGGATGTTGATTTGGTTTAA+TGG - chr5_2:17398509-17398528 Msa0760790:intron 30.0%
!! GGATGTTGATTTGGTTTAAT+GGG - chr5_2:17398510-17398529 Msa0760790:intron 30.0%
CATGACACTAAATGATAAAG+AGG + chr5_2:17398825-17398844 None:intergenic 30.0%
CTCTTTATCATTTAGTGTCA+TGG - chr5_2:17398823-17398842 Msa0760790:CDS 30.0%
ATCACATCACTATCAAATGT+GGG + chr5_2:17398882-17398901 None:intergenic 30.0%
TGATCTGAATTGTGGTTATA+AGG - chr5_2:17398898-17398917 Msa0760790:CDS 30.0%
GATCTGAATTGTGGTTATAA+GGG - chr5_2:17398899-17398918 Msa0760790:CDS 30.0%
ATCTGAATTGTGGTTATAAG+GGG - chr5_2:17398900-17398919 Msa0760790:CDS 30.0%
TTAAAATGAAAGAGATAGGG+TGG - chr5_2:17399042-17399061 Msa0760790:CDS 30.0%
TAAAATGAAAGAGATAGGGT+GGG - chr5_2:17399043-17399062 Msa0760790:CDS 30.0%
GTTTCCTTCTTTCAAAAGAA+TGG - chr5_2:17399079-17399098 Msa0760790:CDS 30.0%
!! CTATCCATTCTTTTGAAAGA+AGG + chr5_2:17399086-17399105 None:intergenic 30.0%
CCTCTTCATAATAATTCACT+AGG + chr5_2:17399294-17399313 None:intergenic 30.0%
CCTAGTGAATTATTATGAAG+AGG - chr5_2:17399291-17399310 Msa0760790:CDS 30.0%
!! AGAATTATTTGCTATGAAGC+TGG - chr5_2:17399330-17399349 Msa0760790:CDS 30.0%
!!! ACTACATTTTTCAAGAAACG+AGG + chr5_2:17399570-17399589 None:intergenic 30.0%
GGATGTGTATATAACAACAT+AGG - chr5_2:17399603-17399622 Msa0760790:CDS 30.0%
!! AATTAACTGCTTTAGGAAGA+TGG - chr5_2:17399640-17399659 Msa0760790:CDS 30.0%
GCTTAAAAGTAAGAATGCAA+CGG + chr5_2:17399741-17399760 None:intergenic 30.0%
TGCCAATAACAAAATCAACT+GGG + chr5_2:17399987-17400006 None:intergenic 30.0%
ATGCCAATAACAAAATCAAC+TGG + chr5_2:17399988-17400007 None:intergenic 30.0%
!! TTTGTTATTGGCATTCGTTA+AGG - chr5_2:17399994-17400013 Msa0760790:intron 30.0%
CAATAAGCTATGTGTATCAA+TGG + chr5_2:17400175-17400194 None:intergenic 30.0%
AGTTGACAATAAAGAGATAG+TGG - chr5_2:17400244-17400263 Msa0760790:intron 30.0%
! TTTCTGGACATAAGACTTTT+GGG - chr5_2:17400294-17400313 Msa0760790:intron 30.0%
! ATGTTTTATCGAACCCATAA+AGG + chr5_2:17400380-17400399 None:intergenic 30.0%
TAGTATTACACACTCAATTC+TGG + chr5_2:17400436-17400455 None:intergenic 30.0%
ATTAAGGATGTGCAACAATA+TGG + chr5_2:17400480-17400499 None:intergenic 30.0%
TATAGGAAAAATAGTCAGGA+AGG + chr5_2:17400593-17400612 None:intergenic 30.0%
AAAATTTCAAACAGGGTTTC+AGG - chr5_2:17400612-17400631 Msa0760790:intron 30.0%
AACAACAAAATGACAGCAAT+AGG - chr5_2:17401017-17401036 Msa0760790:intron 30.0%
!! TTTGCTGTTTCATTCATCAT+AGG + chr5_2:17401145-17401164 None:intergenic 30.0%
TTATTGAAAGATTCTACACG+CGG + chr5_2:17401202-17401221 None:intergenic 30.0%
AACCCTGATAATTACTTGAT+TGG - chr5_2:17401223-17401242 Msa0760790:intron 30.0%
CACCAATCAAGTAATTATCA+GGG + chr5_2:17401228-17401247 None:intergenic 30.0%
TCACCAATCAAGTAATTATC+AGG + chr5_2:17401229-17401248 None:intergenic 30.0%
GATAATTACTTGATTGGTGA+TGG - chr5_2:17401229-17401248 Msa0760790:intron 30.0%
GAAAGACAATCCAAATCAAT+GGG + chr5_2:17401628-17401647 None:intergenic 30.0%
TGAAAGACAATCCAAATCAA+TGG + chr5_2:17401629-17401648 None:intergenic 30.0%
TCAACAAGGATTAAATGACT+AGG + chr5_2:17402103-17402122 None:intergenic 30.0%
TAACTAATGAACACTCAACA+AGG + chr5_2:17402117-17402136 None:intergenic 30.0%
ATCTGTTCTTCCAATGTTAT+AGG - chr5_2:17402141-17402160 Msa0760790:intron 30.0%
CCAAAGATTTCCTATAACAT+TGG + chr5_2:17402154-17402173 None:intergenic 30.0%
CCAATGTTATAGGAAATCTT+TGG - chr5_2:17402151-17402170 Msa0760790:intron 30.0%
AATGGGAAAAACGAAGATAT+TGG - chr5_2:17402242-17402261 Msa0760790:CDS 30.0%
TTTGAAGATTTACACAAGGA+CGG - chr5_2:17402309-17402328 Msa0760790:CDS 30.0%
!! CTTCTTATGTAACTGATTTG+TGG - chr5_2:17402388-17402407 Msa0760790:CDS 30.0%
! TCAAATTTGGGAGTATGAAA+TGG - chr5_2:17402528-17402547 Msa0760790:five_prime_UTR 30.0%
TTGAACTTGAAGGGAGAATA+GGG + chr5_2:17397901-17397920 None:intergenic 35.0%
ATTGAACTTGAAGGGAGAAT+AGG + chr5_2:17397902-17397921 None:intergenic 35.0%
CAAGAATTCTTCGAAATGGA+TGG - chr5_2:17397998-17398017 Msa0760790:three_prime_UTR 35.0%
! TAAGTTTTGCTCAAAAACGG+TGG + chr5_2:17398094-17398113 None:intergenic 35.0%
CAACAACAGTTTCGTTGTTT+GGG - chr5_2:17398165-17398184 Msa0760790:three_prime_UTR 35.0%
TGGTGAAATATAATGAGGAG+TGG - chr5_2:17398568-17398587 Msa0760790:intron 35.0%
TATAATGAGGAGTGGAAAGA+TGG - chr5_2:17398576-17398595 Msa0760790:intron 35.0%
GATCACATCACTATCAAATG+TGG + chr5_2:17398883-17398902 None:intergenic 35.0%
TAGTGATGTGATCTGAATTG+TGG - chr5_2:17398890-17398909 Msa0760790:CDS 35.0%
TCTGAATTGTGGTTATAAGG+GGG - chr5_2:17398901-17398920 Msa0760790:CDS 35.0%
!! TGATTTGGTGTGGTTGAATT+AGG - chr5_2:17398951-17398970 Msa0760790:CDS 35.0%
TGACAAAGAAAGCTATTCTC+AGG - chr5_2:17399178-17399197 Msa0760790:CDS 35.0%
!! ATTTGCTATGAAGCTGGTAT+TGG - chr5_2:17399336-17399355 Msa0760790:CDS 35.0%
GTATGAACTTTGCAATGATG+TGG - chr5_2:17399662-17399681 Msa0760790:CDS 35.0%
!! GCATGTTTTTATGTAGCATG+AGG - chr5_2:17399715-17399734 Msa0760790:CDS 35.0%
ATTCAATACGCCAAAATGGT+GGG - chr5_2:17399795-17399814 Msa0760790:CDS 35.0%
!! AGCCCAGTTGATTTTGTTAT+TGG - chr5_2:17399982-17400001 Msa0760790:intron 35.0%
TGTTCAGGAAACTAGTAGAT+TGG + chr5_2:17400023-17400042 None:intergenic 35.0%
GTTAAACTGATATGCAGAGA+AGG + chr5_2:17400092-17400111 None:intergenic 35.0%
ACTTTCTTGGATTCAACTTC+TGG - chr5_2:17400144-17400163 Msa0760790:intron 35.0%
!! GTTTCTGGACATAAGACTTT+TGG - chr5_2:17400293-17400312 Msa0760790:intron 35.0%
!!! TGAGTGCTGATATTTTACTC+AGG + chr5_2:17400332-17400351 None:intergenic 35.0%
ATATCAGCACTCAATTTGGT+TGG - chr5_2:17400339-17400358 Msa0760790:intron 35.0%
TATCAGCACTCAATTTGGTT+GGG - chr5_2:17400340-17400359 Msa0760790:intron 35.0%
TGACTGGTATACATCCTTTA+TGG - chr5_2:17400363-17400382 Msa0760790:intron 35.0%
GACTGGTATACATCCTTTAT+GGG - chr5_2:17400364-17400383 Msa0760790:intron 35.0%
ATGTGCAACAATATGGCTAA+AGG + chr5_2:17400473-17400492 None:intergenic 35.0%
TAACAATTTGTCCATCAGGA+GGG + chr5_2:17401114-17401133 None:intergenic 35.0%
TTAACAATTTGTCCATCAGG+AGG + chr5_2:17401115-17401134 None:intergenic 35.0%
AAACAGCAAAAGCAATGCTA+AGG - chr5_2:17401155-17401174 Msa0760790:intron 35.0%
TGCTAAGGAAGATCATGAAA+TGG - chr5_2:17401170-17401189 Msa0760790:intron 35.0%
GCTAAGGAAGATCATGAAAT+GGG - chr5_2:17401171-17401190 Msa0760790:intron 35.0%
!!! ATTTCAGGTTTTTCTGCTGA+GGG + chr5_2:17401388-17401407 None:intergenic 35.0%
!!! AATTTCAGGTTTTTCTGCTG+AGG + chr5_2:17401389-17401408 None:intergenic 35.0%
TGAGGTACAGATAGAATTTC+AGG + chr5_2:17401403-17401422 None:intergenic 35.0%
AGCATCTGCAAATGTTATGA+AGG - chr5_2:17401429-17401448 Msa0760790:intron 35.0%
TCTGCAAATGTTATGAAGGA+TGG - chr5_2:17401433-17401452 Msa0760790:intron 35.0%
ATAACATCTGCTTGAGAAGT+CGG + chr5_2:17401481-17401500 None:intergenic 35.0%
! ATACTTTTAGGCACAATCTC+TGG + chr5_2:17401526-17401545 None:intergenic 35.0%
ATAAATCCATCATCTGTCTC+GGG + chr5_2:17401580-17401599 None:intergenic 35.0%
CATAAATCCATCATCTGTCT+CGG + chr5_2:17401581-17401600 None:intergenic 35.0%
! TGGATCATTACCCATTGATT+TGG - chr5_2:17401615-17401634 Msa0760790:intron 35.0%
AACATTGACGAAATATCCAG+AGG - chr5_2:17401733-17401752 Msa0760790:intron 35.0%
ACATTGACGAAATATCCAGA+GGG - chr5_2:17401734-17401753 Msa0760790:intron 35.0%
ATTACCTTGGACAGTATGAA+AGG + chr5_2:17401887-17401906 None:intergenic 35.0%
!!! CTTGTGTATTTTTTGGGTCA+GGG + chr5_2:17401910-17401929 None:intergenic 35.0%
!!! ACTTGTGTATTTTTTGGGTC+AGG + chr5_2:17401911-17401930 None:intergenic 35.0%
ATACCAAACGAAAAGCTTCT+TGG + chr5_2:17401972-17401991 None:intergenic 35.0%
TAACATTGGAAGAACAGATC+AGG + chr5_2:17402140-17402159 None:intergenic 35.0%
TTGAAGATTTACACAAGGAC+GGG - chr5_2:17402310-17402329 Msa0760790:CDS 35.0%
ACATTACTCTGTTTAGTTGC+TGG - chr5_2:17402359-17402378 Msa0760790:CDS 35.0%
! CTGATTTGTGGTGTTTCAAT+TGG - chr5_2:17402400-17402419 Msa0760790:CDS 35.0%
! ATCCAATGTCTGTCTAAAAC+AGG - chr5_2:17402612-17402631 Msa0760790:five_prime_UTR 35.0%
!! TACCTGTTTTAGACAGACAT+TGG + chr5_2:17402617-17402636 None:intergenic 35.0%
!! ATTGATTTTGTGTGTGGGGT+GGG + chr5_2:17397859-17397878 None:intergenic 40.0%
!!! TATTGATTTTGTGTGTGGGG+TGG + chr5_2:17397860-17397879 None:intergenic 40.0%
GAATAGGGGACAAGAGATTA+TGG + chr5_2:17397886-17397905 None:intergenic 40.0%
TGAACTTGAAGGGAGAATAG+GGG + chr5_2:17397900-17397919 None:intergenic 40.0%
GAGCAAAACTTATGACATGG+TGG - chr5_2:17398102-17398121 Msa0760790:three_prime_UTR 40.0%
GAAACTATCGCATCTGTTGA+AGG + chr5_2:17398133-17398152 None:intergenic 40.0%
CAACAGATGCGATAGTTTCA+TGG - chr5_2:17398134-17398153 Msa0760790:three_prime_UTR 40.0%
CCAAACAACGAAACTGTTGT+TGG + chr5_2:17398167-17398186 None:intergenic 40.0%
CCAACAACAGTTTCGTTGTT+TGG - chr5_2:17398164-17398183 Msa0760790:three_prime_UTR 40.0%
ACGCCTTCCATTAGAAATGT+CGG + chr5_2:17398622-17398641 None:intergenic 40.0%
! TTTCTAATGGAAGGCGTATC+CGG - chr5_2:17398625-17398644 Msa0760790:exon 40.0%
! ATGGTTTTCTTCGAGTGGAA+TGG - chr5_2:17398842-17398861 Msa0760790:CDS 40.0%
TTACTTTCACGGTTCAGTTG+AGG + chr5_2:17399000-17399019 None:intergenic 40.0%
TCAACTGAACCGTGAAAGTA+AGG - chr5_2:17398999-17399018 Msa0760790:CDS 40.0%
TAGTTGCTGACAATGTAGGA+GGG + chr5_2:17399136-17399155 None:intergenic 40.0%
CATCTAGTTGCTGACAATGT+AGG + chr5_2:17399140-17399159 None:intergenic 40.0%
CTACATTGTCAGCAACTAGA+TGG - chr5_2:17399138-17399157 Msa0760790:CDS 40.0%
CTGCATTCAATACGCCAAAA+TGG - chr5_2:17399791-17399810 Msa0760790:CDS 40.0%
CATTCAATACGCCAAAATGG+TGG - chr5_2:17399794-17399813 Msa0760790:CDS 40.0%
! AATCAACTGGGCTTTTCACA+AGG + chr5_2:17399975-17399994 None:intergenic 40.0%
! ACTAGTTTCCTGAACACTCT+TGG - chr5_2:17400027-17400046 Msa0760790:intron 40.0%
CTAGTTTCCTGAACACTCTT+GGG - chr5_2:17400028-17400047 Msa0760790:intron 40.0%
! GTGTTGCTCAATTTATCCTC+AGG - chr5_2:17400266-17400285 Msa0760790:intron 40.0%
!! TGGACATAAGACTTTTGGGA+TGG - chr5_2:17400298-17400317 Msa0760790:intron 40.0%
AATTCTTCCCTCTTCAAACC+TGG - chr5_2:17400410-17400429 Msa0760790:intron 40.0%
TTTCAAACAGGGTTTCAGGA+AGG - chr5_2:17400616-17400635 Msa0760790:intron 40.0%
TTGCAAATTCCCAACGATCT+GGG + chr5_2:17400646-17400665 None:intergenic 40.0%
TTTGCAAATTCCCAACGATC+TGG + chr5_2:17400647-17400666 None:intergenic 40.0%
TCGTTGGGAATTTGCAAATG+AGG - chr5_2:17400649-17400668 Msa0760790:intron 40.0%
CGTTGGGAATTTGCAAATGA+GGG - chr5_2:17400650-17400669 Msa0760790:intron 40.0%
! TTGCAAATGAGGGCTTTTTG+AGG - chr5_2:17400660-17400679 Msa0760790:intron 40.0%
! TGCAAATGAGGGCTTTTTGA+GGG - chr5_2:17400661-17400680 Msa0760790:intron 40.0%
CTGTTGTTGAGTATGACCAT+GGG + chr5_2:17400729-17400748 None:intergenic 40.0%
ATGGACAGAGTTCATCAGTA+GGG - chr5_2:17400762-17400781 Msa0760790:intron 40.0%
TGTGTAGAAGTCGGCAAATT+TGG - chr5_2:17400788-17400807 Msa0760790:intron 40.0%
GTGTAGAAGTCGGCAAATTT+GGG - chr5_2:17400789-17400808 Msa0760790:intron 40.0%
CAAACTGAGCAAAGAAACCA+GGG + chr5_2:17400994-17401013 None:intergenic 40.0%
ACAAACTGAGCAAAGAAACC+AGG + chr5_2:17400995-17401014 None:intergenic 40.0%
! CTGAAGTCAACAAAAAGCGT+CGG - chr5_2:17401047-17401066 Msa0760790:intron 40.0%
AACAATTTGTCCATCAGGAG+GGG + chr5_2:17401113-17401132 None:intergenic 40.0%
ACTCAAATTCCAGTGTCAAC+AGG - chr5_2:17401346-17401365 Msa0760790:intron 40.0%
CTCAAATTCCAGTGTCAACA+GGG - chr5_2:17401347-17401366 Msa0760790:intron 40.0%
!!! TTTCAGGTTTTTCTGCTGAG+GGG + chr5_2:17401387-17401406 None:intergenic 40.0%
TAACATCTGCTTGAGAAGTC+GGG + chr5_2:17401480-17401499 None:intergenic 40.0%
! TCTGGTACTGAAGGTATATC+AGG + chr5_2:17401508-17401527 None:intergenic 40.0%
GGAGCCATATAATTGTCTTC+AGG + chr5_2:17401559-17401578 None:intergenic 40.0%
!! CGAGACAGATGATGGATTTA+TGG - chr5_2:17401579-17401598 Msa0760790:intron 40.0%
TTTATGGATCCGAGTTCACT+TGG - chr5_2:17401595-17401614 Msa0760790:intron 40.0%
GGTAATGATCCAAGTGAACT+CGG + chr5_2:17401607-17401626 None:intergenic 40.0%
GATTTGGATTGTCTTTCACC+CGG - chr5_2:17401631-17401650 Msa0760790:intron 40.0%
AAATCATCAATGTCTGCACC+GGG + chr5_2:17401652-17401671 None:intergenic 40.0%
CAAATCATCAATGTCTGCAC+CGG + chr5_2:17401653-17401672 None:intergenic 40.0%
! TCCAAATCCAGAGGATTTTG+AGG - chr5_2:17401708-17401727 Msa0760790:intron 40.0%
ACCTCAAAATCCTCTGGATT+TGG + chr5_2:17401712-17401731 None:intergenic 40.0%
ATGTTGACCTCAAAATCCTC+TGG + chr5_2:17401718-17401737 None:intergenic 40.0%
GATCAACTAACAGAGCAGAT+GGG - chr5_2:17401808-17401827 Msa0760790:intron 40.0%
TTGACCTTTCATACTGTCCA+AGG - chr5_2:17401880-17401899 Msa0760790:intron 40.0%
AAAGCTTCTTGGTGAGCAAA+TGG + chr5_2:17401961-17401980 None:intergenic 40.0%
! TCACCAAGAAGCTTTTCGTT+TGG - chr5_2:17401966-17401985 Msa0760790:intron 40.0%
! ACCAAGGAAACATCAAGTTG+GGG + chr5_2:17402213-17402232 None:intergenic 40.0%
CACCAAGGAAACATCAAGTT+GGG + chr5_2:17402214-17402233 None:intergenic 40.0%
TCACCAAGGAAACATCAAGT+TGG + chr5_2:17402215-17402234 None:intergenic 40.0%
ACTTGATGTTTCCTTGGTGA+TGG - chr5_2:17402215-17402234 Msa0760790:intron 40.0%
! CTTGATGTTTCCTTGGTGAT+GGG - chr5_2:17402216-17402235 Msa0760790:intron 40.0%
!! TTCCTTGGTGATGGGAAAAA+TGG - chr5_2:17402224-17402243 Msa0760790:intron 40.0%
!! TCCTTGGTGATGGGAAAAAT+GGG - chr5_2:17402225-17402244 Msa0760790:intron 40.0%
TGGAATTGAATGCCACTAGA+TGG - chr5_2:17402448-17402467 Msa0760790:CDS 40.0%
TTGAATGCCACTAGATGGAA+TGG - chr5_2:17402453-17402472 Msa0760790:CDS 40.0%
GGGGTGAAATAAGTATCACT+AGG + chr5_2:17402481-17402500 None:intergenic 40.0%
! TTGATTTTGTGTGTGGGGTG+GGG + chr5_2:17397858-17397877 None:intergenic 45.0%
TTCGAAATGGATGGAGCAAG+CGG - chr5_2:17398007-17398026 Msa0760790:three_prime_UTR 45.0%
! GTTTTGCTCAAAAACGGTGG+CGG + chr5_2:17398091-17398110 None:intergenic 45.0%
AAAAGGTCCCTAGCGAATTC+GGG + chr5_2:17398196-17398215 None:intergenic 45.0%
CAAAAGGTCCCTAGCGAATT+CGG + chr5_2:17398197-17398216 None:intergenic 45.0%
GCTTGAAGAACTTCGGCAAA+AGG + chr5_2:17398213-17398232 None:intergenic 45.0%
!! AATGTCGGTGGTGCTACAAA+GGG + chr5_2:17398607-17398626 None:intergenic 45.0%
!! AAATGTCGGTGGTGCTACAA+AGG + chr5_2:17398608-17398627 None:intergenic 45.0%
AGCACCACCGACATTTCTAA+TGG - chr5_2:17398612-17398631 Msa0760790:three_prime_UTR 45.0%
CCTTCCATTAGAAATGTCGG+TGG + chr5_2:17398619-17398638 None:intergenic 45.0%
CCACCGACATTTCTAATGGA+AGG - chr5_2:17398616-17398635 Msa0760790:three_prime_UTR 45.0%
ATCCGGTATCTGACATGTGT+CGG - chr5_2:17398642-17398661 Msa0760790:CDS 45.0%
CACTGAACAAGACAAGGACA+GGG + chr5_2:17398735-17398754 None:intergenic 45.0%
ACACTGAACAAGACAAGGAC+AGG + chr5_2:17398736-17398755 None:intergenic 45.0%
CACTGACACTGAACAAGACA+AGG + chr5_2:17398741-17398760 None:intergenic 45.0%
GTTCAGTGTCAGTGCTTCAT+AGG - chr5_2:17398747-17398766 Msa0760790:CDS 45.0%
! GTGTCATGGTTTTCTTCGAG+TGG - chr5_2:17398837-17398856 Msa0760790:CDS 45.0%
TTCTTCGAGTGGAATGGTGA+CGG - chr5_2:17398848-17398867 Msa0760790:CDS 45.0%
CCACACCAAATCAGTGTGTA+CGG + chr5_2:17398944-17398963 None:intergenic 45.0%
CTAGTTGCTGACAATGTAGG+AGG + chr5_2:17399137-17399156 None:intergenic 45.0%
CAACTAGATGGAGCAGAAGA+GGG - chr5_2:17399150-17399169 Msa0760790:CDS 45.0%
ACTAAAGCTCCTGCAAATGC+AGG + chr5_2:17399835-17399854 None:intergenic 45.0%
CCTCTTAAAAAAGGACAGCC+CGG + chr5_2:17399861-17399880 None:intergenic 45.0%
TTATCCTCAGGCTCAGTTTC+TGG - chr5_2:17400278-17400297 Msa0760790:intron 45.0%
ACTCAATTTGGTTGGGTGAC+TGG - chr5_2:17400347-17400366 Msa0760790:intron 45.0%
ATTCTGGCCAGGTTTGAAGA+GGG + chr5_2:17400420-17400439 None:intergenic 45.0%
AATTCTGGCCAGGTTTGAAG+AGG + chr5_2:17400421-17400440 None:intergenic 45.0%
TTACACACTCAATTCTGGCC+AGG + chr5_2:17400431-17400450 None:intergenic 45.0%
!! GCAAATGAGGGCTTTTTGAG+GGG - chr5_2:17400662-17400681 Msa0760790:intron 45.0%
CCTGTTGTTGAGTATGACCA+TGG + chr5_2:17400730-17400749 None:intergenic 45.0%
CCATGGTCATACTCAACAAC+AGG - chr5_2:17400727-17400746 Msa0760790:intron 45.0%
ACTGATGAACTCTGTCCATG+CGG + chr5_2:17400761-17400780 None:intergenic 45.0%
CATGGACAGAGTTCATCAGT+AGG - chr5_2:17400761-17400780 Msa0760790:intron 45.0%
TGGACAGAGTTCATCAGTAG+GGG - chr5_2:17400763-17400782 Msa0760790:intron 45.0%
CAAATTTGGGCTTGAGGAAG+AGG - chr5_2:17400802-17400821 Msa0760790:intron 45.0%
TTCTCATGCAAGAGCTTGTG+AGG - chr5_2:17400852-17400871 Msa0760790:intron 45.0%
!! AAAGAAACCAGGGCTTTGGA+CGG + chr5_2:17400984-17401003 None:intergenic 45.0%
TACTTCACCATCCAGTGCAA+TGG - chr5_2:17401252-17401271 Msa0760790:intron 45.0%
! ACAGTAGTAGCTCTACAAGC+TGG - chr5_2:17401275-17401294 Msa0760790:intron 45.0%
! TAGCTCTACAAGCTGGAACT+CGG - chr5_2:17401282-17401301 Msa0760790:intron 45.0%
TGAGTAGACTGCACTGAAGA+TGG + chr5_2:17401331-17401350 None:intergenic 45.0%
TCTGCAAACTCCAAATCCAG+AGG - chr5_2:17401699-17401718 Msa0760790:intron 45.0%
CGAAATATCCAGAGGGAATG+AGG - chr5_2:17401741-17401760 Msa0760790:intron 45.0%
!! TTGTCCCAGCCATTTTCTGT+TGG + chr5_2:17401772-17401791 None:intergenic 45.0%
TGCTCTGTTAGTTGATCCAG+GGG + chr5_2:17401805-17401824 None:intergenic 45.0%
CTGCTCTGTTAGTTGATCCA+GGG + chr5_2:17401806-17401825 None:intergenic 45.0%
TCTGCTCTGTTAGTTGATCC+AGG + chr5_2:17401807-17401826 None:intergenic 45.0%
GGATCAACTAACAGAGCAGA+TGG - chr5_2:17401807-17401826 Msa0760790:intron 45.0%
!! TTTTGGGTCAGGGATTACCT+TGG + chr5_2:17401900-17401919 None:intergenic 45.0%
TCCCCAACTTGATGTTTCCT+TGG - chr5_2:17402209-17402228 Msa0760790:intron 45.0%
!! TCCCATTTTTCCCATCACCA+AGG + chr5_2:17402229-17402248 None:intergenic 45.0%
GTGCACTTGTCAGACACTTT+GGG + chr5_2:17402277-17402296 None:intergenic 45.0%
TTACACAAGGACGGGAACAT+TGG - chr5_2:17402318-17402337 Msa0760790:CDS 45.0%
CTAGGTACCATTCCATCTAG+TGG + chr5_2:17402463-17402482 None:intergenic 45.0%
! TGATTTTGTGTGTGGGGTGG+GGG + chr5_2:17397857-17397876 None:intergenic 50.0%
GGGTTCAACCACCCAAATAC+CGG - chr5_2:17398036-17398055 Msa0760790:three_prime_UTR 50.0%
!! TTCGCGTTTAGCATCGGTGT+CGG + chr5_2:17398064-17398083 None:intergenic 50.0%
CACCGACACATGTCAGATAC+CGG + chr5_2:17398647-17398666 None:intergenic 50.0%
AGGACAGGGTACATCAACGA+TGG + chr5_2:17398721-17398740 None:intergenic 50.0%
TGTGGTTATAAGGGGGAGAC+AGG - chr5_2:17398908-17398927 Msa0760790:CDS 50.0%
CAAATCAGTGTGTACGGCGA+AGG + chr5_2:17398938-17398957 None:intergenic 50.0%
! CTTCGCCGTACACACTGATT+TGG - chr5_2:17398936-17398955 Msa0760790:CDS 50.0%
!! CCGTACACACTGATTTGGTG+TGG - chr5_2:17398941-17398960 Msa0760790:CDS 50.0%
GCAACTAGATGGAGCAGAAG+AGG - chr5_2:17399149-17399168 Msa0760790:CDS 50.0%
! GTATTGGCCCTGTATTGCGA+GGG - chr5_2:17399352-17399371 Msa0760790:CDS 50.0%
AACGTGTCCCTCGCAATACA+GGG + chr5_2:17399362-17399381 None:intergenic 50.0%
AAACGTGTCCCTCGCAATAC+AGG + chr5_2:17399363-17399382 None:intergenic 50.0%
! TTGCAGGAGCTTTAGTGCAC+CGG - chr5_2:17399839-17399858 Msa0760790:CDS 50.0%
!!! CCGGGCTGTCCTTTTTTAAG+AGG - chr5_2:17399858-17399877 Msa0760790:CDS 50.0%
TTCCTGAACACTCTTGGGTG+TGG - chr5_2:17400033-17400052 Msa0760790:intron 50.0%
!! TTCCACACCCAAGAGTGTTC+AGG + chr5_2:17400038-17400057 None:intergenic 50.0%
ATGTCCAGAAACTGAGCCTG+AGG + chr5_2:17400285-17400304 None:intergenic 50.0%
GAAGGTTGACCCAGATCGTT+GGG - chr5_2:17400634-17400653 Msa0760790:intron 50.0%
AGTCGAAGAAAACCTGCCCA+TGG - chr5_2:17400710-17400729 Msa0760790:intron 50.0%
TGTTGAGTATGACCATGGGC+AGG + chr5_2:17400725-17400744 None:intergenic 50.0%
! GTAGGGGCATGTGTAGAAGT+CGG - chr5_2:17400779-17400798 Msa0760790:intron 50.0%
AGTCGGCAAATTTGGGCTTG+AGG - chr5_2:17400796-17400815 Msa0760790:intron 50.0%
CAGCAGCAACAAACCACTGA+CGG - chr5_2:17400881-17400900 Msa0760790:intron 50.0%
GCTGAACCATTGTTTGCAGC+TGG + chr5_2:17400907-17400926 None:intergenic 50.0%
ACAATGGTTCAGCGCCTTCA+AGG - chr5_2:17400914-17400933 Msa0760790:intron 50.0%
GTCGTTGCTCCATTCCTTGA+AGG + chr5_2:17400931-17400950 None:intergenic 50.0%
GAGCAAAGAAACCAGGGCTT+TGG + chr5_2:17400988-17401007 None:intergenic 50.0%
CTACTGTCCATTGCACTGGA+TGG + chr5_2:17401262-17401281 None:intergenic 50.0%
GCTACTACTGTCCATTGCAC+TGG + chr5_2:17401266-17401285 None:intergenic 50.0%
AGCTCTACAAGCTGGAACTC+GGG - chr5_2:17401283-17401302 Msa0760790:intron 50.0%
CTCGGGAGTAACTCTTCAAG+AGG - chr5_2:17401300-17401319 Msa0760790:intron 50.0%
GTAGACTGCACTGAAGATGG+AGG + chr5_2:17401328-17401347 None:intergenic 50.0%
TTTGCAGATGCTGCAGCTTG+AGG + chr5_2:17401421-17401440 None:intergenic 50.0%
! GGCACAATCTCTGGTACTGA+AGG + chr5_2:17401517-17401536 None:intergenic 50.0%
GAGGTGCAGCCAACAGAAAA+TGG - chr5_2:17401760-17401779 Msa0760790:intron 50.0%
TGCAGCCAACAGAAAATGGC+TGG - chr5_2:17401764-17401783 Msa0760790:intron 50.0%
GCAGCCAACAGAAAATGGCT+GGG - chr5_2:17401765-17401784 Msa0760790:intron 50.0%
GGACAATAATACTCAGCCCC+TGG - chr5_2:17401786-17401805 Msa0760790:intron 50.0%
GCTTCTTGGTGAGCAAATGG+AGG + chr5_2:17401958-17401977 None:intergenic 50.0%
CGTGCACTTGTCAGACACTT+TGG + chr5_2:17402278-17402297 None:intergenic 50.0%
AGTGTCTGACAAGTGCACGT+TGG - chr5_2:17402279-17402298 Msa0760790:CDS 50.0%
GAAATGGATGGAGCAAGCGG+CGG - chr5_2:17398010-17398029 Msa0760790:three_prime_UTR 55.0%
!! GGTATTGGCCCTGTATTGCG+AGG - chr5_2:17399351-17399370 Msa0760790:CDS 55.0%
! AAAATGGTGGGACCCCTTCC+CGG - chr5_2:17399807-17399826 Msa0760790:CDS 55.0%
CAAATGCAGGATCCGGGAAG+GGG + chr5_2:17399822-17399841 None:intergenic 55.0%
GCAAATGCAGGATCCGGGAA+GGG + chr5_2:17399823-17399842 None:intergenic 55.0%
TGCAAATGCAGGATCCGGGA+AGG + chr5_2:17399824-17399843 None:intergenic 55.0%
TTCCCGGATCCTGCATTTGC+AGG - chr5_2:17399823-17399842 Msa0760790:CDS 55.0%
CTCCTGCAAATGCAGGATCC+GGG + chr5_2:17399828-17399847 None:intergenic 55.0%
GCTCCTGCAAATGCAGGATC+CGG + chr5_2:17399829-17399848 None:intergenic 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG - chr5_2:17399840-17399859 Msa0760790:CDS 55.0%
GGAAGGTTGACCCAGATCGT+TGG - chr5_2:17400633-17400652 Msa0760790:intron 55.0%
GGCTTGAGGAAGAGGTTGAG+AGG - chr5_2:17400810-17400829 Msa0760790:intron 55.0%
TGACGGCCAGCTGCAAACAA+TGG - chr5_2:17400898-17400917 Msa0760790:intron 55.0%
GGTTCAGCGCCTTCAAGGAA+TGG - chr5_2:17400919-17400938 Msa0760790:intron 55.0%
!! CAAAAAGCGTCGGCTCAAGC+AGG - chr5_2:17401057-17401076 Msa0760790:intron 55.0%
CCTTGAGTCCCTGTTGACAC+TGG + chr5_2:17401358-17401377 None:intergenic 55.0%
CCAGTGTCAACAGGGACTCA+AGG - chr5_2:17401355-17401374 Msa0760790:intron 55.0%
ATGGCTCCCGAGACAGATGA+TGG - chr5_2:17401571-17401590 Msa0760790:intron 55.0%
TTTGTGTGTGGGGTGGGGGA+GGG + chr5_2:17397853-17397872 None:intergenic 60.0%
! TTTTGTGTGTGGGGTGGGGG+AGG + chr5_2:17397854-17397873 None:intergenic 60.0%
!! TTTAGCATCGGTGTCGGCGC+CGG + chr5_2:17398058-17398077 None:intergenic 60.0%
GGCGCGTTCGCGTTTAGCAT+CGG + chr5_2:17398070-17398089 None:intergenic 60.0%
GGACCCACCCGAATTCGCTA+GGG - chr5_2:17398186-17398205 Msa0760790:three_prime_UTR 60.0%
GGTCCCTAGCGAATTCGGGT+GGG + chr5_2:17398192-17398211 None:intergenic 60.0%
AGGTCCCTAGCGAATTCGGG+TGG + chr5_2:17398193-17398212 None:intergenic 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr5_2:17399808-17399827 None:intergenic 60.0%
CAACAGGCTCAGCAACCGCA+TGG - chr5_2:17400743-17400762 Msa0760790:intron 60.0%
TGTTTGCAGCTGGCCGTCAG+TGG + chr5_2:17400897-17400916 None:intergenic 60.0%
!! GGCTTTGGACGGCTTTGGCA+AGG + chr5_2:17400973-17400992 None:intergenic 60.0%
!! ACCAGGGCTTTGGACGGCTT+TGG + chr5_2:17400978-17400997 None:intergenic 60.0%
!! AAGCGTCGGCTCAAGCAGGA+TGG - chr5_2:17401061-17401080 Msa0760790:intron 60.0%
GAGCAAGCTACCCCTCCTGA+TGG - chr5_2:17401100-17401119 Msa0760790:intron 60.0%
TGGCTGCACCTCATTCCCTC+TGG + chr5_2:17401752-17401771 None:intergenic 60.0%
GATGGAGCAAGCGGCGGAGA+GGG - chr5_2:17398016-17398035 Msa0760790:three_prime_UTR 65.0%
!! TGTCGGCGCCGGTATTTGGG+TGG + chr5_2:17398047-17398066 None:intergenic 65.0%
!! CGGTGTCGGCGCCGGTATTT+GGG + chr5_2:17398050-17398069 None:intergenic 65.0%
!! TCGGTGTCGGCGCCGGTATT+TGG + chr5_2:17398051-17398070 None:intergenic 65.0%
GGGACCCACCCGAATTCGCT+AGG - chr5_2:17398185-17398204 Msa0760790:three_prime_UTR 65.0%
GCCAAAGCCGTCCAAAGCCC+TGG - chr5_2:17400974-17400993 Msa0760790:intron 65.0%
GTGGGGTGGGGGAGGGAGTA+TGG + chr5_2:17397846-17397865 None:intergenic 70.0%
GGATGGAGCAAGCGGCGGAG+AGG - chr5_2:17398015-17398034 Msa0760790:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 17397842 17402661 17397842 ID=Msa0760790;Name=Msa0760790
chr5_2 mRNA 17397842 17402661 17397842 ID=Msa0760790-mRNA-1;Parent=Msa0760790;Name=Msa0760790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=171|1|1|1|0.5|0.33|3|539|498
chr5_2 exon 17397842 17398340 17397842 ID=Msa0760790-mRNA-1:exon:7739;Parent=Msa0760790-mRNA-1
chr5_2 exon 17398602 17399877 17398602 ID=Msa0760790-mRNA-1:exon:7738;Parent=Msa0760790-mRNA-1
chr5_2 exon 17402230 17402661 17402230 ID=Msa0760790-mRNA-1:exon:7737;Parent=Msa0760790-mRNA-1
chr5_2 five_prime_UTR 17402491 17402661 17402491 ID=Msa0760790-mRNA-1:five_prime_utr;Parent=Msa0760790-mRNA-1
chr5_2 CDS 17402230 17402490 17402230 ID=Msa0760790-mRNA-1:cds;Parent=Msa0760790-mRNA-1
chr5_2 CDS 17398642 17399877 17398642 ID=Msa0760790-mRNA-1:cds;Parent=Msa0760790-mRNA-1
chr5_2 three_prime_UTR 17398602 17398641 17398602 ID=Msa0760790-mRNA-1:three_prime_utr;Parent=Msa0760790-mRNA-1
chr5_2 three_prime_UTR 17397842 17398340 17397842 ID=Msa0760790-mRNA-1:three_prime_utr;Parent=Msa0760790-mRNA-1
Gene Sequence

>Msa0760790

ATGGATGGAGCAAGCGGCGGAGAGGGTTCAACCACCCAAATACCGGCGCCGACACCGATGCTAAACGCGAACGCGCCGCCACCGTTTTTGAGCAAAACTTATGACATGGTGGATGATCCTTCAACAGATGCGATAGTTTCATGGAGCGCAACCAACAACAGTTTCGTTGTTTGGGACCCACCCGAATTCGCTAGGGACCTTTTGCCGAAGTTCTTCAAGCATAACAATTTCTCAAGCTTTGTGAGACAGTTGAATACTTATGGTTTCAGGAAGGTTGACCCAGATCGTTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCAATTGCTTAAGAGTATTAGTCGAAGAAAACCTGCCCATGGTCATACTCAACAACAGGCTCAGCAACCGCATGGACAGAGTTCATCAGTAGGGGCATGTGTAGAAGTCGGCAAATTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTTCTCATGCAAGAGCTTGTGAGGTTGAGACAGCAGCAACAAACCACTGACGGCCAGCTGCAAACAATGGTTCAGCGCCTTCAAGGAATGGAGCAACGACAACAGCAAATGATGTCATTCCTTGCCAAAGCCGTCCAAAGCCCTGGTTTCTTTGCTCAGTTTGTGCAACAACAAAATGACAGCAATAGGCGCATTACTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGATGGTATTGCTGAAACAACAGAGCAAGCTACCCCTCCTGATGGACAAATTGTTAAATATCAACCTATGATGAATGAAACAGCAAAAGCAATGCTAAGGAAGATCATGAAATGGGATACTCCGCGTGTAGAATCTTTCAATAAAAACCCTGATAATTACTTGATTGGTGATGGTACTTCACCATCCAGTGCAATGGACAGTAGTAGCTCTACAAGCTGGAACTCGGGAGTAACTCTTCAAGAGGTTCCTCCATCTTCAGTGCAGTCTACTCAAATTCCAGTGTCAACAGGGACTCAAGGACACATCCCCTCAGCAGAAAAACCTGAAATTCTATCTGTACCTCAAGCTGCAGCATCTGCAAATGTTATGAAGGATGGAACACATGCAGCATCGACTATCCCGACTTCTCAAGCAGATGTTATAATGCCTGATATACCTTCAGTACCAGAGATTGTGCCTAAAAGTATTCTTGATATACCTGAAGACAATTATATGGCTCCCGAGACAGATGATGGATTTATGGATCCGAGTTCACTTGGATCATTACCCATTGATTTGGATTGTCTTTCACCCGGTGCAGACATTGATGATTTGTTAAGCAATTCTATTTGGGATGATCTTCTGCAAACTCCAAATCCAGAGGATTTTGAGGTCAACATTGACGAAATATCCAGAGGGAATGAGGTGCAGCCAACAGAAAATGGCTGGGACAATAATACTCAGCCCCTGGATCAACTAACAGAGCAGATGGGTCTTCTTTCTTCTGATGCCAAAAGAATTTAA
Protein sequence

>Msa0760790

MDGASGGEGSTTQIPAPTPMLNANAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSISRRKPAHGHTQQQAQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDGQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQDGIAETTEQATPPDGQIVKYQPMMNETAKAMLRKIMKWDTPRVESFNKNPDNYLIGDGTSPSSAMDSSSSTSWNSGVTLQEVPPSSVQSTQIPVSTGTQGHIPSAEKPEILSVPQAAASANVMKDGTHAASTIPTSQADVIMPDIPSVPEIVPKSILDIPEDNYMAPETDDGFMDPSSLGSLPIDLDCLSPGADIDDLLSNSIWDDLLQTPNPEDFEVNIDEISRGNEVQPTENGWDNNTQPLDQLTEQMGLLSSDAKRI*