AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0764710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0764710 MtrunA17_Chr5g0415291 85.222 203 28 1 1 203 1 201 2.29e-125 355
Msa0764710 MtrunA17_Chr8g0363921 58.150 227 59 8 5 203 22 240 3.71e-69 214
Msa0764710 MtrunA17_Chr8g0339091 50.867 173 62 3 74 226 233 402 7.35e-45 157
Msa0764710 MtrunA17_Chr7g0234761 63.281 128 43 1 77 204 284 407 8.74e-45 157
Msa0764710 MtrunA17_Chr3g0144641 61.654 133 40 3 74 196 148 279 1.72e-42 148
Msa0764710 MtrunA17_Chr4g0035101 56.164 146 61 3 79 222 109 253 3.92e-42 146
Msa0764710 MtrunA17_Chr8g0385911 60.656 122 40 3 111 232 142 255 8.95e-40 139
Msa0764710 MtrunA17_Chr5g0421111 68.224 107 33 1 93 198 343 449 1.48e-39 143
Msa0764710 MtrunA17_Chr8g0365941 73.404 94 24 1 93 185 283 376 1.80e-39 142
Msa0764710 MtrunA17_Chr3g0131771 82.278 79 14 0 107 185 140 218 4.08e-39 138
Msa0764710 MtrunA17_Chr1g0152131 72.043 93 25 1 94 185 239 331 1.80e-38 138
Msa0764710 MtrunA17_Chr1g0174161 78.667 75 16 0 111 185 157 231 1.24e-35 129
Msa0764710 MtrunA17_Chr6g0484271 52.381 126 53 1 75 200 123 241 2.73e-35 126
Msa0764710 MtrunA17_Chr7g0258161 75.000 80 20 0 108 187 167 246 7.63e-35 127
Msa0764710 MtrunA17_Chr1g0190731 56.962 79 33 1 101 179 180 257 1.55e-20 89.0
Msa0764710 MtrunA17_Chr4g0074161 61.644 73 27 1 107 179 199 270 1.71e-20 89.4
Msa0764710 MtrunA17_Chr1g0184841 39.189 148 82 3 58 203 67 208 8.18e-16 75.1
Msa0764710 MtrunA17_Chr1g0182791 47.500 80 40 2 116 195 319 396 6.95e-15 73.6
Msa0764710 MtrunA17_Chr4g0032951 53.846 65 30 0 114 178 355 419 3.09e-14 71.6
Msa0764710 MtrunA17_Chr1g0193321 48.438 64 32 1 116 179 464 526 4.49e-14 71.2
Msa0764710 MtrunA17_Chr4g0014771 47.692 65 34 0 114 178 118 182 3.09e-13 66.2
Msa0764710 MtrunA17_Chr2g0329041 49.231 65 33 0 112 176 330 394 4.11e-13 68.2
Msa0764710 MtrunA17_Chr1g0174271 49.254 67 34 0 114 180 298 364 2.07e-12 65.9
Msa0764710 MtrunA17_Chr3g0134741 44.565 92 42 3 90 178 207 292 2.84e-12 65.1
Msa0764710 MtrunA17_Chr5g0393721 32.298 161 94 5 26 178 134 287 3.94e-12 65.1
Msa0764710 MtrunA17_Chr7g0258181 46.269 67 36 0 114 180 243 309 5.87e-12 64.3
Msa0764710 MtrunA17_Chr1g0153241 35.106 94 55 2 87 180 63 150 6.19e-12 63.9
Msa0764710 MtrunA17_Chr1g0152651 47.692 65 33 1 114 178 274 337 1.12e-11 63.9
Msa0764710 MtrunA17_Chr8g0351881 47.692 65 34 0 114 178 316 380 1.33e-11 63.5
Msa0764710 MtrunA17_Chr7g0262691 43.056 72 40 1 108 179 246 316 5.11e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0764710 AT1G59640.1 50.000 246 69 8 1 208 1 230 1.46e-59 189
Msa0764710 AT1G59640.2 50.847 236 62 8 1 198 1 220 4.72e-57 185
Msa0764710 AT5G62610.2 45.690 232 75 7 4 196 18 237 2.00e-47 159
Msa0764710 AT5G62610.1 45.690 232 75 7 4 196 18 237 2.00e-47 159
Msa0764710 AT3G23690.1 58.065 155 51 3 47 187 110 264 9.74e-46 157
Msa0764710 AT3G07340.2 54.286 175 55 6 13 187 182 331 5.43e-44 154
Msa0764710 AT3G07340.1 52.459 183 62 6 13 195 182 339 7.36e-44 154
Msa0764710 AT5G50915.3 52.439 164 70 4 27 185 47 207 7.82e-44 149
Msa0764710 AT5G50915.4 52.439 164 70 4 27 185 47 207 7.82e-44 149
Msa0764710 AT1G68920.3 71.171 111 30 2 76 185 264 373 2.31e-43 153
Msa0764710 AT1G68920.1 71.171 111 30 2 76 185 265 374 2.37e-43 153
Msa0764710 AT1G68920.4 71.171 111 30 2 76 185 265 374 2.37e-43 153
Msa0764710 AT1G68920.2 71.171 111 30 2 76 185 265 374 2.37e-43 153
Msa0764710 AT5G50915.1 52.761 163 69 4 27 184 47 206 2.44e-43 148
Msa0764710 AT5G50915.2 52.761 163 69 4 27 184 47 206 2.44e-43 148
Msa0764710 AT5G48560.2 53.846 169 67 4 61 226 252 412 4.24e-43 152
Msa0764710 AT5G48560.1 53.846 169 67 4 61 226 252 412 7.17e-43 152
Msa0764710 AT4G34530.1 69.697 99 29 1 90 188 149 246 3.91e-40 141
Msa0764710 AT4G36540.1 60.156 128 46 3 82 209 113 235 8.97e-40 139
Msa0764710 AT2G18300.2 46.552 174 70 3 32 200 116 271 4.72e-39 138
Msa0764710 AT1G26260.3 69.000 100 27 1 90 185 144 243 5.19e-39 138
Msa0764710 AT1G10120.2 73.563 87 23 0 99 185 191 277 7.45e-39 138
Msa0764710 AT1G10120.1 73.563 87 23 0 99 185 191 277 7.45e-39 138
Msa0764710 AT2G18300.3 46.552 174 70 3 32 200 116 271 8.84e-39 138
Msa0764710 AT1G26260.5 69.000 100 27 1 90 185 173 272 1.06e-38 138
Msa0764710 AT1G26260.4 69.000 100 27 1 90 185 195 294 1.33e-38 138
Msa0764710 AT1G26260.1 69.000 100 27 1 90 185 195 294 1.33e-38 138
Msa0764710 AT1G26260.6 69.000 100 27 1 90 185 195 294 1.33e-38 138
Msa0764710 AT1G26260.2 69.000 100 27 1 90 185 195 294 1.33e-38 138
Msa0764710 AT4G36540.2 59.375 128 45 3 82 209 113 233 1.42e-38 136
Msa0764710 AT2G18300.1 46.512 172 69 3 32 198 116 269 4.25e-38 135
Msa0764710 AT2G42300.4 73.750 80 21 0 108 187 179 258 1.51e-35 127
Msa0764710 AT3G57800.2 76.250 80 19 0 108 187 198 277 2.80e-35 129
Msa0764710 AT2G42300.1 50.370 135 52 2 108 229 179 311 3.19e-35 128
Msa0764710 AT1G73830.2 54.167 120 55 0 67 186 100 219 7.38e-35 125
Msa0764710 AT1G73830.1 54.167 120 55 0 67 186 100 219 7.88e-35 125
Msa0764710 AT1G18400.2 73.333 75 20 0 112 186 143 217 1.41e-33 122
Msa0764710 AT1G18400.1 73.333 75 20 0 112 186 143 217 2.68e-33 121
Msa0764710 AT1G25330.1 69.231 78 24 0 109 186 99 176 3.22e-33 120
Msa0764710 AT3G57800.1 47.328 131 22 1 104 187 194 324 1.73e-26 106
Msa0764710 AT2G24260.2 60.274 73 28 1 107 179 28 99 1.83e-21 90.1
Msa0764710 AT4G30980.1 49.038 104 44 3 76 179 100 194 3.31e-21 90.5
Msa0764710 AT4G30980.2 49.038 104 44 3 76 179 148 242 8.54e-21 90.1
Msa0764710 AT2G24260.1 60.274 73 28 1 107 179 131 202 1.48e-20 89.4
Msa0764710 AT5G58010.1 65.672 67 22 1 113 179 98 163 1.67e-20 88.6
Msa0764710 AT2G42300.5 80.435 46 9 0 108 153 179 224 7.32e-19 82.8
Msa0764710 AT2G42300.3 80.435 46 9 0 108 153 179 224 7.32e-19 82.8
Msa0764710 AT2G42300.2 80.435 46 9 0 108 153 179 224 9.02e-19 82.4
Msa0764710 AT2G20180.7 50.794 63 30 1 117 179 210 271 5.33e-14 71.2
Msa0764710 AT2G20180.1 50.794 63 30 1 117 179 210 271 5.33e-14 71.2
Msa0764710 AT2G20180.5 50.794 63 30 1 117 179 210 271 5.33e-14 71.2
Msa0764710 AT2G20180.4 50.000 64 31 1 116 179 280 342 6.79e-14 70.9
Msa0764710 AT2G20180.6 50.000 64 31 1 116 179 280 342 6.79e-14 70.9
Msa0764710 AT2G20180.2 50.000 64 31 1 116 179 280 342 6.79e-14 70.9
Msa0764710 AT2G20180.3 50.000 64 31 1 116 179 280 342 6.79e-14 70.9
Msa0764710 AT1G09530.3 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT1G09530.2 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT1G09530.5 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT1G09530.1 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT1G09530.4 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT1G09530.6 48.438 64 32 1 116 179 339 401 7.12e-14 70.9
Msa0764710 AT4G28815.2 43.333 90 43 4 117 205 71 153 1.22e-13 68.6
Msa0764710 AT4G02590.3 38.732 142 76 4 58 199 37 167 1.53e-13 68.6
Msa0764710 AT4G02590.2 38.732 142 76 4 58 199 100 230 3.90e-13 68.2
Msa0764710 AT4G02590.1 38.732 142 76 4 58 199 100 230 3.90e-13 68.2
Msa0764710 AT4G28815.1 43.333 90 43 4 117 205 147 229 4.46e-13 67.8
Msa0764710 AT4G28790.1 30.189 159 99 4 31 179 179 335 5.33e-13 68.2
Msa0764710 AT4G28800.1 50.000 62 30 1 117 178 252 312 5.80e-13 68.2
Msa0764710 AT1G51140.1 51.562 64 31 0 114 177 304 367 1.07e-12 67.0
Msa0764710 AT4G28800.2 41.237 97 42 4 117 200 264 358 1.08e-12 67.4
Msa0764710 AT1G03040.1 48.837 86 43 1 114 199 144 228 1.31e-12 66.6
Msa0764710 AT1G03040.2 48.837 86 43 1 114 199 139 223 1.33e-12 66.2
Msa0764710 AT1G03040.3 48.837 86 43 1 114 199 144 228 1.62e-12 66.6
Msa0764710 AT2G20180.8 49.180 61 30 1 116 176 280 339 2.85e-12 65.9
Msa0764710 AT1G35460.1 40.000 75 45 0 114 188 181 255 6.41e-12 63.9
Msa0764710 AT2G42280.1 46.875 64 34 0 114 177 279 342 8.87e-12 64.3
Msa0764710 AT1G27740.1 31.293 147 69 2 32 178 116 230 9.65e-12 63.5
Msa0764710 AT4G09180.1 43.284 67 38 0 112 178 182 248 1.29e-11 63.2
Msa0764710 AT2G46970.2 37.895 95 53 2 90 179 163 256 1.44e-11 63.9
Msa0764710 AT2G42280.3 48.485 66 32 1 114 177 279 344 1.48e-11 63.9
Msa0764710 AT2G46970.3 37.895 95 53 2 90 179 172 265 1.53e-11 63.9
Msa0764710 AT2G46970.1 37.895 95 53 2 90 179 194 287 1.64e-11 63.9
Msa0764710 AT4G36930.1 41.304 92 46 4 120 209 197 282 2.06e-11 63.5
Msa0764710 AT4G28790.2 29.677 155 97 4 31 175 179 331 3.73e-11 62.4
Msa0764710 AT4G00050.2 47.692 65 33 1 114 178 105 168 3.78e-11 62.4
Msa0764710 AT2G43140.2 46.377 69 37 0 114 182 231 299 3.89e-11 62.4
Msa0764710 AT2G43140.1 46.377 69 37 0 114 182 134 202 4.93e-11 60.8
Msa0764710 AT4G00050.1 47.692 65 33 1 114 178 207 270 6.72e-11 62.0
Msa0764710 AT4G00050.3 47.692 65 33 1 114 178 207 270 7.58e-11 61.6

Find 97 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTTGAGTATATGATTTA+TGG 0.135504 5_2:+25092034 None:intergenic
TCCTATTTGCATTTACTATC+AGG 0.256165 5_2:+25092081 None:intergenic
ATCAGTAGCTTGACCCCTTC+TGG 0.262138 5_2:+25093949 None:intergenic
GGGGCTAAACTGCGGTCTTC+TGG 0.273092 5_2:+25095123 None:intergenic
TCAGATTTCGAATCTTTCTA+TGG 0.279173 5_2:-25095179 Msa0764710:exon
ACATGGATGTAGTCTTTCTT+AGG 0.315186 5_2:+25093977 None:intergenic
GCCACGGCCACCACCATTGC+CGG 0.331116 5_2:+25094991 None:intergenic
TGAAAGGATGAAAACTCTTC+AGG 0.347449 5_2:-25093104 Msa0764710:CDS
TCTATACCACAGGGTCGTTT+TGG 0.349836 5_2:-25091979 Msa0764710:three_prime_UTR
GACCCTGTGGTATAGAAAAC+TGG 0.360558 5_2:+25091986 None:intergenic
GTGGTAGTGGTGACGGAAAA+AGG 0.360840 5_2:-25094078 Msa0764710:CDS
ACCTTGAGTATATGATTTAT+GGG 0.371471 5_2:+25092035 None:intergenic
TGTTTGTTCTGAATACATAA+TGG 0.384620 5_2:-25091848 Msa0764710:three_prime_UTR
ATACTCTTTCTGCAAGACTA+TGG 0.386857 5_2:+25093924 None:intergenic
CGTATCATCTCCCGGAGATC+TGG 0.389824 5_2:-25095150 Msa0764710:CDS
AAAGGAGAAGAAAACAGTTC+AGG 0.396640 5_2:-25094034 Msa0764710:CDS
TTACATAAGATCTAGCTTAG+TGG 0.409585 5_2:-25091905 Msa0764710:three_prime_UTR
ACCTGATAGTAAATGCAAAT+AGG 0.412337 5_2:-25092082 Msa0764710:three_prime_UTR
CATTGGAAAATCTCCGAAGC+TGG 0.412609 5_2:+25095102 None:intergenic
CTTCTGGACTGCCAGATCTC+CGG 0.419175 5_2:+25095139 None:intergenic
TCAGTTAAATGCGTTTCAAC+CGG 0.427861 5_2:-25095010 Msa0764710:CDS
ACACTGATGGACAGGCTAGA+AGG 0.430987 5_2:-25093138 Msa0764710:intron
TGCATTTGTTATTAGTGTGC+TGG 0.440251 5_2:-25091940 Msa0764710:three_prime_UTR
ACCGGCAATGGTGGTGGCCG+TGG 0.442087 5_2:-25094992 Msa0764710:CDS
TTCTGGACTGCCAGATCTCC+GGG 0.448211 5_2:+25095140 None:intergenic
ACTCTTCAGGATTTAGTCCC+TGG 0.449489 5_2:-25093091 Msa0764710:CDS
CTACTTGGTGGTGAAGTGAT+TGG 0.461423 5_2:+25092790 None:intergenic
GTGGGTAATTACCACGTTGT+TGG 0.463305 5_2:+25094964 None:intergenic
ATGTAGTCTTTCTTAGGATG+TGG 0.471510 5_2:+25093983 None:intergenic
ACTGGAATCAAGTGTCCGTT+AGG 0.472265 5_2:+25092004 None:intergenic
CCGCAGTTTAGCCCCAGCTT+CGG 0.487641 5_2:-25095115 Msa0764710:CDS
AACCATACCTTGTTGCAACC+AGG 0.489186 5_2:+25093073 None:intergenic
TTACATATGCAGCTGGGAGG+TGG 0.500933 5_2:-25092140 Msa0764710:CDS
GTTTCAACCGGCAATGGTGG+TGG 0.501162 5_2:-25094998 Msa0764710:CDS
AGATAATTCACACCTCTACT+TGG 0.503743 5_2:+25092775 None:intergenic
AGAGTGGTTACATATGCAGC+TGG 0.504135 5_2:-25092147 Msa0764710:CDS
ATTGGAAAATCTCCGAAGCT+GGG 0.505786 5_2:+25095103 None:intergenic
ACAGTGAATGAATAGTGATA+TGG 0.506101 5_2:+25095317 None:intergenic
CACTGATGGACAGGCTAGAA+GGG 0.507526 5_2:-25093137 Msa0764710:intron
GACCCCTTCTGGCTCGAACA+TGG 0.511902 5_2:+25093960 None:intergenic
GGGTTTGTGCAGAATGATGA+TGG 0.512242 5_2:-25094100 Msa0764710:intron
TCAGGTTATTGGAAAAGCAT+TGG 0.514448 5_2:-25092838 Msa0764710:intron
GATTTCAATTTATTCAACAT+AGG 0.519995 5_2:+25091768 None:intergenic
AACAGCGAGGGAGGGAAGAA+TGG 0.520840 5_2:+25095227 None:intergenic
ACCAAACAATTAAAATCGCA+TGG 0.523285 5_2:+25091746 None:intergenic
GCATTTGTTATTAGTGTGCT+GGG 0.525751 5_2:-25091939 Msa0764710:three_prime_UTR
AAGACATCAGGGAACAGTAA+AGG 0.528363 5_2:-25094052 Msa0764710:CDS
CAGAATGATGATGGTGGTAG+TGG 0.528680 5_2:-25094091 Msa0764710:CDS
CATCCATGTTCGAGCCAGAA+GGG 0.533625 5_2:-25093963 Msa0764710:CDS
AAGACCAACTCCTGGTATTG+AGG 0.535318 5_2:-25092640 Msa0764710:CDS
AGAGGAAACGCCTCAATACC+AGG 0.549144 5_2:+25092630 None:intergenic
AATAGTGATATGGTTGGAGT+TGG 0.550623 5_2:+25095327 None:intergenic
TGCGTTTCAACCGGCAATGG+TGG 0.550896 5_2:-25095001 Msa0764710:CDS
AAATGCGTTTCAACCGGCAA+TGG 0.555059 5_2:-25095004 Msa0764710:CDS
ATCATTGTTGTCGTAAAAGA+CGG 0.558350 5_2:-25091872 Msa0764710:three_prime_UTR
TATAATTGATTATCTCATCA+AGG 0.561459 5_2:+25092814 None:intergenic
ATTATAGAGTTTAACAGCGA+GGG 0.563815 5_2:+25095215 None:intergenic
GGATCCAGCGTATCATCTCC+CGG 0.570528 5_2:-25095158 Msa0764710:CDS
ACCATACCTTGTTGCAACCA+GGG 0.571972 5_2:+25093074 None:intergenic
GATGATGGTGGTAGTGGTGA+CGG 0.576355 5_2:-25094085 Msa0764710:CDS
GAAGGGAAAAGATTAGTGAA+AGG 0.577890 5_2:-25093120 Msa0764710:CDS
TCAGTACTGAGATCTTCCAT+TGG 0.581952 5_2:+25095085 None:intergenic
TAATTCACACCTCTACTTGG+TGG 0.582744 5_2:+25092778 None:intergenic
AACGCCTCAATACCAGGAGT+TGG 0.584696 5_2:+25092636 None:intergenic
ACATCCATGTTCGAGCCAGA+AGG 0.584719 5_2:-25093964 Msa0764710:CDS
TCCCATAAATCATATACTCA+AGG 0.586272 5_2:-25092036 Msa0764710:three_prime_UTR
CCACGTTGTTGGAATTGCCA+CGG 0.590128 5_2:+25094975 None:intergenic
ATATGGTTGGAGTTGGACAC+TGG 0.593652 5_2:+25095334 None:intergenic
ATAGAGTTTAACAGCGAGGG+AGG 0.594812 5_2:+25095218 None:intergenic
GTAAATTCAAGACCAACTCC+TGG 0.595020 5_2:-25092648 Msa0764710:CDS
CTTGTAGCTTGTGAAGCGAA+TGG 0.606152 5_2:+25092194 None:intergenic
ATCCATGTTCGAGCCAGAAG+GGG 0.611344 5_2:-25093962 Msa0764710:CDS
TAGAGTTTAACAGCGAGGGA+GGG 0.612328 5_2:+25095219 None:intergenic
AGCTGCATATGTAACCACTC+TGG 0.617342 5_2:+25092149 None:intergenic
TTGGAAAATCTCCGAAGCTG+GGG 0.627605 5_2:+25095104 None:intergenic
TTTAGTCCCTGGTTGCAACA+AGG 0.628236 5_2:-25093080 Msa0764710:intron
ATCTCCGGGAGATGATACGC+TGG 0.632287 5_2:+25095154 None:intergenic
TCAAGGTGTTGAAGTCCTAA+CGG 0.633598 5_2:-25092019 Msa0764710:three_prime_UTR
ATCACTTCACCACCAAGTAG+AGG 0.638957 5_2:-25092787 Msa0764710:intron
GAAAAGTAGAATAGAGACGA+AGG 0.649676 5_2:-25095038 Msa0764710:CDS
GAGTGGTTACATATGCAGCT+GGG 0.656275 5_2:-25092146 Msa0764710:CDS
TATTATAGAGTTTAACAGCG+AGG 0.665362 5_2:+25095214 None:intergenic
ACCACTCTGGTGATGCACCT+CGG 0.668855 5_2:+25092162 None:intergenic
TTGTATGGGAGGGAGTCCCA+AGG 0.669417 5_2:-25095436 None:intergenic
TGAATGAATAGTGATATGGT+TGG 0.671981 5_2:+25095321 None:intergenic
GCTACAAGAGAGTACAGCCG+AGG 0.682744 5_2:-25092179 Msa0764710:CDS
TACAAACCAAAACGACCCTG+TGG 0.687298 5_2:+25091973 None:intergenic
AGCTTGTGAAGCGAATGGTA+TGG 0.687729 5_2:+25092199 None:intergenic
AAACAGTTCAGGAAAGCATG+CGG 0.691753 5_2:-25094023 Msa0764710:CDS
CCGAAGCTGGGGCTAAACTG+CGG 0.692738 5_2:+25095115 None:intergenic
TTGTGAAGCGAATGGTATGG+TGG 0.693506 5_2:+25092202 None:intergenic
GCCGAGGTGCATCACCAGAG+TGG 0.699435 5_2:-25092163 Msa0764710:CDS
TGGTTACATATGCAGCTGGG+AGG 0.711832 5_2:-25092143 Msa0764710:CDS
CACTGGACAGTGTAGCGTGG+TGG 0.717387 5_2:+25095351 None:intergenic
CCGTGGCAATTCCAACAACG+TGG 0.733634 5_2:-25094975 Msa0764710:intron
GGACACTGGACAGTGTAGCG+TGG 0.741944 5_2:+25095348 None:intergenic
TTTGTGCAGAATGATGATGG+TGG 0.743796 5_2:-25094097 Msa0764710:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAACTTTTTAATATTTAATA+TGG + chr5_2:25092695-25092714 None:intergenic 10.0%
!!! GCTTTATTTTATTTTTATTA+TGG - chr5_2:25092775-25092794 Msa0764710:intron 10.0%
!! AATAAAACCTATATAAATTT+AGG + chr5_2:25093597-25093616 None:intergenic 10.0%
!!! ACATTAAATTTTTAGAAAAA+AGG + chr5_2:25094441-25094460 None:intergenic 10.0%
!!! TTTATTTGAGTTTTTTTTAC+CGG - chr5_2:25092419-25092438 Msa0764710:intron 15.0%
!!! TTAAATTGTTTTTGTATATG+TGG - chr5_2:25092575-25092594 Msa0764710:intron 15.0%
!! TACAATTTAGTATTACAATA+TGG - chr5_2:25092964-25092983 Msa0764710:intron 15.0%
!! AACAATTCCTAAATTTATAT+AGG - chr5_2:25093587-25093606 Msa0764710:intron 15.0%
!! AAACATAATAAATCTATTTG+AGG - chr5_2:25094774-25094793 Msa0764710:intron 15.0%
!! TTATGTTATCTTAATTACGA+AGG - chr5_2:25092270-25092289 Msa0764710:intron 20.0%
!! ACGAAGGAAAAAATATATAT+TGG - chr5_2:25092286-25092305 Msa0764710:intron 20.0%
!! CGAAGGAAAAAATATATATT+GGG - chr5_2:25092287-25092306 Msa0764710:intron 20.0%
!!! ATTTAGTTCTACTAGAAAAT+TGG - chr5_2:25092315-25092334 Msa0764710:intron 20.0%
!! TGTATTAACCAAGTAATTAA+AGG - chr5_2:25092363-25092382 Msa0764710:intron 20.0%
!!! AGAGTTTTTAAAACAACTTA+CGG - chr5_2:25092468-25092487 Msa0764710:intron 20.0%
!!! AATAAAGCTATTTTCATGTA+AGG + chr5_2:25092763-25092782 None:intergenic 20.0%
!!! TCACAAAGTGTATTTTTATA+TGG - chr5_2:25093295-25093314 Msa0764710:intron 20.0%
!!! TATTACTTTTTTTGACAACT+TGG - chr5_2:25093392-25093411 Msa0764710:intron 20.0%
!!! AGTAAATTGTGTTTCTATTT+GGG + chr5_2:25093534-25093553 None:intergenic 20.0%
!!! TAGTAAATTGTGTTTCTATT+TGG + chr5_2:25093535-25093554 None:intergenic 20.0%
!!! TTAATGGTTGTTTTAGTTTT+AGG - chr5_2:25093791-25093810 Msa0764710:intron 20.0%
!! AGTTATACACATAAAAAATG+CGG + chr5_2:25094166-25094185 None:intergenic 20.0%
!!! GATTTGTTTTTAATGTATTC+AGG - chr5_2:25094322-25094341 Msa0764710:intron 20.0%
!!! TTTTAATGTATTCAGGTTAT+TGG - chr5_2:25094329-25094348 Msa0764710:intron 20.0%
!! TATAATTGATTATCTCATCA+AGG + chr5_2:25094367-25094386 None:intergenic 20.0%
!!! TAAATACTTACAGTTTTAAG+AGG + chr5_2:25094569-25094588 None:intergenic 20.0%
!! TTATTCTATATAATGTCCTT+TGG - chr5_2:25094649-25094668 Msa0764710:intron 20.0%
!!! TTTAGTCCTCAAATTTTTAA+CGG + chr5_2:25094804-25094823 None:intergenic 20.0%
!! GATTTCAATTTATTCAACAT+AGG + chr5_2:25095413-25095432 None:intergenic 20.0%
! AAAAGATAGCATAATTGAGT+GGG + chr5_2:25092235-25092254 None:intergenic 25.0%
! AAAAAGATAGCATAATTGAG+TGG + chr5_2:25092236-25092255 None:intergenic 25.0%
! TAACCAAGTAATTAAAGGTT+AGG - chr5_2:25092368-25092387 Msa0764710:intron 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr5_2:25092494-25092513 None:intergenic 25.0%
!!! GTTGTTTTTGTAAGCTATAT+TGG - chr5_2:25092601-25092620 Msa0764710:intron 25.0%
!! ATATTTAATATGGGCTTGTT+TGG + chr5_2:25092685-25092704 None:intergenic 25.0%
! TAGTATTACAATATGGAGAA+TGG - chr5_2:25092971-25092990 Msa0764710:intron 25.0%
! TAAAAATAGTAATCCGCAAT+AGG + chr5_2:25093002-25093021 None:intergenic 25.0%
!! TTCTTATATTTAAGACCAGA+GGG + chr5_2:25093475-25093494 None:intergenic 25.0%
!!! TTTAGGAATTGTTTTTGAGA+AGG + chr5_2:25093580-25093599 None:intergenic 25.0%
! TTTATGAGACTAAGAAGATT+AGG - chr5_2:25093680-25093699 Msa0764710:intron 25.0%
! AAATGAAACTGTTACGTAAA+TGG - chr5_2:25093946-25093965 Msa0764710:CDS 25.0%
! AATGAAACTGTTACGTAAAT+GGG - chr5_2:25093947-25093966 Msa0764710:CDS 25.0%
!! TATTTTGCAATCAGTGTTAT+TGG - chr5_2:25093991-25094010 Msa0764710:CDS 25.0%
! TAAAAACAAATCAAGCCATA+AGG + chr5_2:25094314-25094333 None:intergenic 25.0%
!! ATGCTATATATTCTAGAAGT+TGG - chr5_2:25094615-25094634 Msa0764710:intron 25.0%
!!! TAAACTCTTTAATTTGGACT+AGG + chr5_2:25094861-25094880 None:intergenic 25.0%
! GCACTTTAAACTCTTTAATT+TGG + chr5_2:25094867-25094886 None:intergenic 25.0%
! GAAGATAGATTTAGCTAAAA+AGG + chr5_2:25094903-25094922 None:intergenic 25.0%
! ACCTTGAGTATATGATTTAT+GGG + chr5_2:25095146-25095165 None:intergenic 25.0%
!! TGTTTGTTCTGAATACATAA+TGG - chr5_2:25095330-25095349 Msa0764710:five_prime_UTR 25.0%
TGAATGAATAGTGATATGGT+TGG + chr5_2:25091860-25091879 None:intergenic 30.0%
ACAGTGAATGAATAGTGATA+TGG + chr5_2:25091864-25091883 None:intergenic 30.0%
ATTATAGAGTTTAACAGCGA+GGG + chr5_2:25091966-25091985 None:intergenic 30.0%
TATTATAGAGTTTAACAGCG+AGG + chr5_2:25091967-25091986 None:intergenic 30.0%
TCAGATTTCGAATCTTTCTA+TGG - chr5_2:25091999-25092018 Msa0764710:three_prime_UTR 30.0%
GAACCTAACCTTTAATTACT+TGG + chr5_2:25092374-25092393 None:intergenic 30.0%
ATTCTCATAAGTCTTTAAGC+CGG + chr5_2:25092441-25092460 None:intergenic 30.0%
! AATTGTCAGAAGTTGTTTCA+TGG - chr5_2:25092636-25092655 Msa0764710:CDS 30.0%
GATTAAGATGTTTATCCAAG+TGG - chr5_2:25092836-25092855 Msa0764710:CDS 30.0%
TACTCATTAAAACTTCCACT+TGG + chr5_2:25092854-25092873 None:intergenic 30.0%
! TGGTAATTTAGAGTTTGACT+AGG + chr5_2:25092899-25092918 None:intergenic 30.0%
AGTCAAACTCTAAATTACCA+AGG - chr5_2:25092899-25092918 Msa0764710:intron 30.0%
AAACTCTAAATTACCAAGGT+CGG - chr5_2:25092903-25092922 Msa0764710:intron 30.0%
! TGGAATTCAAGCATTGTTAT+TGG - chr5_2:25093037-25093056 Msa0764710:intron 30.0%
CTTTGTGAGAATTAGAAAGT+AGG + chr5_2:25093283-25093302 None:intergenic 30.0%
TTAGATAATGTTGATCCTGA+AGG - chr5_2:25093335-25093354 Msa0764710:intron 30.0%
! CTTCTTATATTTAAGACCAG+AGG + chr5_2:25093476-25093495 None:intergenic 30.0%
CAAGTTTCATGTTCTTAACT+GGG - chr5_2:25093836-25093855 Msa0764710:intron 30.0%
!! GGGAGGTAATATTGATTTAT+TGG - chr5_2:25093967-25093986 Msa0764710:CDS 30.0%
TGAATATTGATGAACACTGA+TGG - chr5_2:25094027-25094046 Msa0764710:CDS 30.0%
TGAGCTGAAAATATTCCTTA+TGG - chr5_2:25094296-25094315 Msa0764710:intron 30.0%
GCATTCAACGTAAAAGAATT+AGG + chr5_2:25094599-25094618 None:intergenic 30.0%
AAAAAAGCTTCTAACCAAAC+TGG + chr5_2:25094713-25094732 None:intergenic 30.0%
! GGTTTTCCGTTAAAAATTTG+AGG - chr5_2:25094795-25094814 Msa0764710:intron 30.0%
TTGGTCACTCAATGATTATT+GGG + chr5_2:25094831-25094850 None:intergenic 30.0%
TTTGGTCACTCAATGATTAT+TGG + chr5_2:25094832-25094851 None:intergenic 30.0%
! TCATATGTTTCTGATCAAAC+TGG + chr5_2:25094951-25094970 None:intergenic 30.0%
ACCTGATAGTAAATGCAAAT+AGG - chr5_2:25095096-25095115 Msa0764710:CDS 30.0%
TCCTATTTGCATTTACTATC+AGG + chr5_2:25095100-25095119 None:intergenic 30.0%
TCCCATAAATCATATACTCA+AGG - chr5_2:25095142-25095161 Msa0764710:CDS 30.0%
CACCTTGAGTATATGATTTA+TGG + chr5_2:25095147-25095166 None:intergenic 30.0%
! TTACATAAGATCTAGCTTAG+TGG - chr5_2:25095273-25095292 Msa0764710:five_prime_UTR 30.0%
ATCATTGTTGTCGTAAAAGA+CGG - chr5_2:25095306-25095325 Msa0764710:intron 30.0%
! TTTTCAGACACATCTACCTT+GGG + chr5_2:25091761-25091780 None:intergenic 35.0%
AATAGTGATATGGTTGGAGT+TGG + chr5_2:25091854-25091873 None:intergenic 35.0%
TGTAGAGAGAGTGAATTGTT+TGG + chr5_2:25091901-25091920 None:intergenic 35.0%
!! TCGTCTCTATTCTACTTTTC+CGG + chr5_2:25092140-25092159 None:intergenic 35.0%
GAAAAGTAGAATAGAGACGA+AGG - chr5_2:25092140-25092159 Msa0764710:CDS 35.0%
TCAGTTAAATGCGTTTCAAC+CGG - chr5_2:25092168-25092187 Msa0764710:CDS 35.0%
AAGGTTAGGTTCAACTCTTA+AGG - chr5_2:25092382-25092401 Msa0764710:intron 35.0%
TTTCAAAAGTAAACCGACCT+TGG + chr5_2:25092919-25092938 None:intergenic 35.0%
! AAGCATTGTTATTGGAGTAG+AGG - chr5_2:25093045-25093064 Msa0764710:intron 35.0%
GAAAAAGGAGTAAGACATCA+GGG - chr5_2:25093115-25093134 Msa0764710:CDS 35.0%
AAAGGAGAAGAAAACAGTTC+AGG - chr5_2:25093144-25093163 Msa0764710:intron 35.0%
ATGTAGTCTTTCTTAGGATG+TGG + chr5_2:25093198-25093217 None:intergenic 35.0%
ACATGGATGTAGTCTTTCTT+AGG + chr5_2:25093204-25093223 None:intergenic 35.0%
ATACTCTTTCTGCAAGACTA+TGG + chr5_2:25093257-25093276 None:intergenic 35.0%
TTTGACAACTTGGAATCAGT+AGG - chr5_2:25093402-25093421 Msa0764710:intron 35.0%
CGGTCTCGATTATAAACAAA+AGG + chr5_2:25093757-25093776 None:intergenic 35.0%
TGTTTATAATCGAGACCGAA+TGG - chr5_2:25093759-25093778 Msa0764710:intron 35.0%
CATTAAGCAAAACCACCATT+CGG + chr5_2:25093777-25093796 None:intergenic 35.0%
GCAAGTTTCATGTTCTTAAC+TGG - chr5_2:25093835-25093854 Msa0764710:intron 35.0%
CTGGGATAATTGTAATACTG+AGG - chr5_2:25093854-25093873 Msa0764710:intron 35.0%
GAAGGGAAAAGATTAGTGAA+AGG - chr5_2:25094058-25094077 Msa0764710:CDS 35.0%
TGAAAGGATGAAAACTCTTC+AGG - chr5_2:25094074-25094093 Msa0764710:CDS 35.0%
! TCAGGTTATTGGAAAAGCAT+TGG - chr5_2:25094340-25094359 Msa0764710:intron 35.0%
AGATAATTCACACCTCTACT+TGG + chr5_2:25094406-25094425 None:intergenic 35.0%
AGTTATACTCATCTCACCAA+AGG + chr5_2:25094668-25094687 None:intergenic 35.0%
GGTATCCTTGCGATAAAAAA+GGG + chr5_2:25094692-25094711 None:intergenic 35.0%
TGGTATCCTTGCGATAAAAA+AGG + chr5_2:25094693-25094712 None:intergenic 35.0%
!! ATTTGGACTAGGTCTGATTT+TGG + chr5_2:25094850-25094869 None:intergenic 35.0%
! ATTCCAGTTTTCTATACCAC+AGG - chr5_2:25095189-25095208 Msa0764710:five_prime_UTR 35.0%
! TTCCAGTTTTCTATACCACA+GGG - chr5_2:25095190-25095209 Msa0764710:five_prime_UTR 35.0%
!! TGCATTTGTTATTAGTGTGC+TGG - chr5_2:25095238-25095257 Msa0764710:five_prime_UTR 35.0%
!! GCATTTGTTATTAGTGTGCT+GGG - chr5_2:25095239-25095258 Msa0764710:five_prime_UTR 35.0%
! GTTTTCAGACACATCTACCT+TGG + chr5_2:25091762-25091781 None:intergenic 40.0%
!! AATTGTTTGGTGTGAGGGAA+TGG + chr5_2:25091888-25091907 None:intergenic 40.0%
!! GAGTGAATTGTTTGGTGTGA+GGG + chr5_2:25091893-25091912 None:intergenic 40.0%
!! AGAGTGAATTGTTTGGTGTG+AGG + chr5_2:25091894-25091913 None:intergenic 40.0%
ATTGGAAAATCTCCGAAGCT+GGG + chr5_2:25092078-25092097 None:intergenic 40.0%
! TCAGTACTGAGATCTTCCAT+TGG + chr5_2:25092096-25092115 None:intergenic 40.0%
GAACAAAAACCACTGAACCA+TGG - chr5_2:25092114-25092133 Msa0764710:CDS 40.0%
GTTCAACTCTTAAGGTGTGT+TGG - chr5_2:25092390-25092409 Msa0764710:intron 40.0%
AAAACAACTTACGGCCTGTT+TGG - chr5_2:25092477-25092496 Msa0764710:intron 40.0%
TGGAGTAGAGGTAGTGAATT+TGG - chr5_2:25093057-25093076 Msa0764710:intron 40.0%
GGAGTAGAGGTAGTGAATTT+GGG - chr5_2:25093058-25093077 Msa0764710:intron 40.0%
!! TTTGTGCAGAATGATGATGG+TGG - chr5_2:25093081-25093100 Msa0764710:CDS 40.0%
GGAAAAAGGAGTAAGACATC+AGG - chr5_2:25093114-25093133 Msa0764710:CDS 40.0%
AAGACATCAGGGAACAGTAA+AGG - chr5_2:25093126-25093145 Msa0764710:CDS 40.0%
! AAACAGTTCAGGAAAGCATG+CGG - chr5_2:25093155-25093174 Msa0764710:intron 40.0%
TCAAGCAAGCAATATCCTTC+AGG + chr5_2:25093353-25093372 None:intergenic 40.0%
ACCAAATTCTATACTCCCTC+TGG - chr5_2:25093457-25093476 Msa0764710:intron 40.0%
! ACCAGAGGGAGTATAGAATT+TGG + chr5_2:25093461-25093480 None:intergenic 40.0%
TTATAATCGAGACCGAATGG+TGG - chr5_2:25093762-25093781 Msa0764710:intron 40.0%
!! CGAATGGTGGTTTTGCTTAA+TGG - chr5_2:25093775-25093794 Msa0764710:intron 40.0%
GAAACTGTTACGTAAATGGG+AGG - chr5_2:25093950-25093969 Msa0764710:CDS 40.0%
! ATTGATGAACACTGATGGAC+AGG - chr5_2:25094032-25094051 Msa0764710:CDS 40.0%
TAATTCACACCTCTACTTGG+TGG + chr5_2:25094403-25094422 None:intergenic 40.0%
GTAAATTCAAGACCAACTCC+TGG - chr5_2:25094530-25094549 Msa0764710:intron 40.0%
!!! AACTGCCCTTTTTTATCGCA+AGG - chr5_2:25094684-25094703 Msa0764710:intron 40.0%
TTATCGCAAGGATACCAGTT+TGG - chr5_2:25094696-25094715 Msa0764710:intron 40.0%
GATTAGTAGATAGTAGCAGC+AGG - chr5_2:25094747-25094766 Msa0764710:intron 40.0%
!! TCAAGGTGTTGAAGTCCTAA+CGG - chr5_2:25095159-25095178 Msa0764710:CDS 40.0%
ATATGGTTGGAGTTGGACAC+TGG + chr5_2:25091847-25091866 None:intergenic 45.0%
TAGAGTTTAACAGCGAGGGA+GGG + chr5_2:25091962-25091981 None:intergenic 45.0%
ATAGAGTTTAACAGCGAGGG+AGG + chr5_2:25091963-25091982 None:intergenic 45.0%
TTGGAAAATCTCCGAAGCTG+GGG + chr5_2:25092077-25092096 None:intergenic 45.0%
CATTGGAAAATCTCCGAAGC+TGG + chr5_2:25092079-25092098 None:intergenic 45.0%
! CAGCTTCGGAGATTTTCCAA+TGG - chr5_2:25092077-25092096 Msa0764710:three_prime_UTR 45.0%
AAAAACCACTGAACCATGGC+CGG - chr5_2:25092118-25092137 Msa0764710:CDS 45.0%
!! CTATTCTACTTTTCCGGCCA+TGG + chr5_2:25092134-25092153 None:intergenic 45.0%
AAATGCGTTTCAACCGGCAA+TGG - chr5_2:25092174-25092193 Msa0764710:CDS 45.0%
GTGGGTAATTACCACGTTGT+TGG + chr5_2:25092217-25092236 None:intergenic 45.0%
GAGAATGGATCTGCCTATTG+CGG - chr5_2:25092986-25093005 Msa0764710:intron 45.0%
GGGTTTGTGCAGAATGATGA+TGG - chr5_2:25093078-25093097 Msa0764710:intron 45.0%
!! CAGAATGATGATGGTGGTAG+TGG - chr5_2:25093087-25093106 Msa0764710:CDS 45.0%
ACTCTTCAGGATTTAGTCCC+TGG - chr5_2:25094087-25094106 Msa0764710:CDS 45.0%
TTTAGTCCCTGGTTGCAACA+AGG - chr5_2:25094098-25094117 Msa0764710:intron 45.0%
ACCATACCTTGTTGCAACCA+GGG + chr5_2:25094107-25094126 None:intergenic 45.0%
AACCATACCTTGTTGCAACC+AGG + chr5_2:25094108-25094127 None:intergenic 45.0%
!! CTACTTGGTGGTGAAGTGAT+TGG + chr5_2:25094391-25094410 None:intergenic 45.0%
ATCACTTCACCACCAAGTAG+AGG - chr5_2:25094391-25094410 Msa0764710:intron 45.0%
AAGACCAACTCCTGGTATTG+AGG - chr5_2:25094538-25094557 Msa0764710:intron 45.0%
AGTAGATAGTAGCAGCAGGT+AGG - chr5_2:25094751-25094770 Msa0764710:intron 45.0%
TTGTGAAGCGAATGGTATGG+TGG + chr5_2:25094979-25094998 None:intergenic 45.0%
AGCTTGTGAAGCGAATGGTA+TGG + chr5_2:25094982-25095001 None:intergenic 45.0%
! CTTGTAGCTTGTGAAGCGAA+TGG + chr5_2:25094987-25095006 None:intergenic 45.0%
AGCTGCATATGTAACCACTC+TGG + chr5_2:25095032-25095051 None:intergenic 45.0%
AGAGTGGTTACATATGCAGC+TGG - chr5_2:25095031-25095050 Msa0764710:CDS 45.0%
GAGTGGTTACATATGCAGCT+GGG - chr5_2:25095032-25095051 Msa0764710:CDS 45.0%
ACTGGAATCAAGTGTCCGTT+AGG + chr5_2:25095177-25095196 None:intergenic 45.0%
GACCCTGTGGTATAGAAAAC+TGG + chr5_2:25095195-25095214 None:intergenic 45.0%
! TCTATACCACAGGGTCGTTT+TGG - chr5_2:25095199-25095218 Msa0764710:five_prime_UTR 45.0%
TACAAACCAAAACGACCCTG+TGG + chr5_2:25095208-25095227 None:intergenic 45.0%
!!! AACTTTTTAATATTTAATAT+GGG + chr5_2:25092694-25092713 None:intergenic 5.0%
!!! TTTTATTTTTATTTTTTTGT+TGG - chr5_2:25093017-25093036 Msa0764710:intron 5.0%
CCACGTTGTTGGAATTGCCA+CGG + chr5_2:25092206-25092225 None:intergenic 50.0%
!! GATGATGGTGGTAGTGGTGA+CGG - chr5_2:25093093-25093112 Msa0764710:CDS 50.0%
!! GTGGTAGTGGTGACGGAAAA+AGG - chr5_2:25093100-25093119 Msa0764710:CDS 50.0%
ACATCCATGTTCGAGCCAGA+AGG - chr5_2:25093214-25093233 Msa0764710:intron 50.0%
CATCCATGTTCGAGCCAGAA+GGG - chr5_2:25093215-25093234 Msa0764710:intron 50.0%
ATCCATGTTCGAGCCAGAAG+GGG - chr5_2:25093216-25093235 Msa0764710:intron 50.0%
ATCAGTAGCTTGACCCCTTC+TGG + chr5_2:25093232-25093251 None:intergenic 50.0%
! ACACTGATGGACAGGCTAGA+AGG - chr5_2:25094040-25094059 Msa0764710:CDS 50.0%
! CACTGATGGACAGGCTAGAA+GGG - chr5_2:25094041-25094060 Msa0764710:CDS 50.0%
TCCCTGGTTGCAACAAGGTA+TGG - chr5_2:25094103-25094122 Msa0764710:intron 50.0%
AACGCCTCAATACCAGGAGT+TGG + chr5_2:25094545-25094564 None:intergenic 50.0%
AGAGGAAACGCCTCAATACC+AGG + chr5_2:25094551-25094570 None:intergenic 50.0%
TGGTTACATATGCAGCTGGG+AGG - chr5_2:25095035-25095054 Msa0764710:CDS 50.0%
TTACATATGCAGCTGGGAGG+TGG - chr5_2:25095038-25095057 Msa0764710:CDS 50.0%
AACAGCGAGGGAGGGAAGAA+TGG + chr5_2:25091954-25091973 None:intergenic 55.0%
GGATCCAGCGTATCATCTCC+CGG - chr5_2:25092020-25092039 Msa0764710:three_prime_UTR 55.0%
ATCTCCGGGAGATGATACGC+TGG + chr5_2:25092027-25092046 None:intergenic 55.0%
CGTATCATCTCCCGGAGATC+TGG - chr5_2:25092028-25092047 Msa0764710:three_prime_UTR 55.0%
TTCTGGACTGCCAGATCTCC+GGG + chr5_2:25092041-25092060 None:intergenic 55.0%
CTTCTGGACTGCCAGATCTC+CGG + chr5_2:25092042-25092061 None:intergenic 55.0%
! CTTTTCCGGCCATGGTTCAG+TGG + chr5_2:25092126-25092145 None:intergenic 55.0%
TGCGTTTCAACCGGCAATGG+TGG - chr5_2:25092177-25092196 Msa0764710:CDS 55.0%
GTTTCAACCGGCAATGGTGG+TGG - chr5_2:25092180-25092199 Msa0764710:CDS 55.0%
CCGTGGCAATTCCAACAACG+TGG - chr5_2:25092203-25092222 Msa0764710:CDS 55.0%
! CTGAGGCTGACACACTGACT+CGG - chr5_2:25093871-25093890 Msa0764710:intron 55.0%
!! CTGACACACTGACTCGGCTA+TGG - chr5_2:25093877-25093896 Msa0764710:intron 55.0%
! GCTACAAGAGAGTACAGCCG+AGG - chr5_2:25094999-25095018 Msa0764710:CDS 55.0%
! ACCACTCTGGTGATGCACCT+CGG + chr5_2:25095019-25095038 None:intergenic 55.0%
CACTGGACAGTGTAGCGTGG+TGG + chr5_2:25091830-25091849 None:intergenic 60.0%
GGACACTGGACAGTGTAGCG+TGG + chr5_2:25091833-25091852 None:intergenic 60.0%
GGGGCTAAACTGCGGTCTTC+TGG + chr5_2:25092058-25092077 None:intergenic 60.0%
CCGAAGCTGGGGCTAAACTG+CGG + chr5_2:25092066-25092085 None:intergenic 60.0%
CCGCAGTTTAGCCCCAGCTT+CGG - chr5_2:25092063-25092082 Msa0764710:three_prime_UTR 60.0%
!! GACCCCTTCTGGCTCGAACA+TGG + chr5_2:25093221-25093240 None:intergenic 60.0%
GCCGAGGTGCATCACCAGAG+TGG - chr5_2:25095015-25095034 Msa0764710:CDS 65.0%
!! ACCGGCAATGGTGGTGGCCG+TGG - chr5_2:25092186-25092205 Msa0764710:CDS 70.0%
GCCACGGCCACCACCATTGC+CGG + chr5_2:25092190-25092209 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 25091752 25095448 25091752 ID=Msa0764710;Name=Msa0764710
chr5_2 mRNA 25091752 25095448 25091752 ID=Msa0764710-mRNA-1;Parent=Msa0764710;Name=Msa0764710-mRNA-1;_AED=0.07;_eAED=0.07;_QI=246|1|1|1|0.83|0.71|7|362|243
chr5_2 exon 25091752 25092248 25091752 ID=Msa0764710-mRNA-1:exon:10143;Parent=Msa0764710-mRNA-1
chr5_2 exon 25092623 25092694 25092623 ID=Msa0764710-mRNA-1:exon:10142;Parent=Msa0764710-mRNA-1
chr5_2 exon 25092788 25092856 25092788 ID=Msa0764710-mRNA-1:exon:10141;Parent=Msa0764710-mRNA-1
chr5_2 exon 25093081 25093146 25093081 ID=Msa0764710-mRNA-1:exon:10140;Parent=Msa0764710-mRNA-1
chr5_2 exon 25093928 25094110 25093928 ID=Msa0764710-mRNA-1:exon:10139;Parent=Msa0764710-mRNA-1
chr5_2 exon 25094976 25095298 25094976 ID=Msa0764710-mRNA-1:exon:10138;Parent=Msa0764710-mRNA-1
chr5_2 exon 25095319 25095448 25095319 ID=Msa0764710-mRNA-1:exon:10137;Parent=Msa0764710-mRNA-1
chr5_2 five_prime_UTR 25095319 25095448 25095319 ID=Msa0764710-mRNA-1:five_prime_utr;Parent=Msa0764710-mRNA-1
chr5_2 five_prime_UTR 25095183 25095298 25095183 ID=Msa0764710-mRNA-1:five_prime_utr;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25094976 25095182 25094976 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25093928 25094110 25093928 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25093081 25093146 25093081 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25092788 25092856 25092788 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25092623 25092694 25092623 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 CDS 25092114 25092248 25092114 ID=Msa0764710-mRNA-1:cds;Parent=Msa0764710-mRNA-1
chr5_2 three_prime_UTR 25091752 25092113 25091752 ID=Msa0764710-mRNA-1:three_prime_utr;Parent=Msa0764710-mRNA-1
Gene Sequence

>Msa0764710

ATGGATCCAGCGTATCATCTCCCGGAGATCTGGCAGTCCAGAAGACCGCAGTTTAGCCCCAGCTTCGGAGATTTTCCAATGGAAGATCTCAGTACTGAACAAAAACCACTGAACCATGGCCGGAAAAGTAGAATAGAGACGAAGGAAAATTCAGTTAAATGCGTTTCAACCGGCAATGGTGGTGGCCGTGGCAATTCCAACAACGTGAATGATGATGGTGGTAGTGGTGACGGAAAAAGGAGTAAGACATCAGGGAACAGTAAAGGAGAAGAAAACAGTTCAGGAAAGCATGCGGAAGAAACTAGTGTTGAGCCACATCCTAAGAAAGACTACATCCATGTTCGAGCCAGAAGGGGTCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAACTCTTCAGGATTTAGTCCCTGGTTGCAACAAGGTTATTGGAAAAGCATTGGTCCTTGATGAGATAATCAATTATATCCAATCACTTCACCACCAAGTAGAGTTTTTGTCGATGAAGCTTGAAGCAGTAAATTCAAGACCAACTCCTGGTATTGAGGCGTTTCCTCTTAAAACTTTTGATCAGAAACATATGATACAACCACCATACCATTCGCTTCACAAGCTACAAGAGAGTACAGCCGAGGTGCATCACCAGAGTGGTTACATATGCAGCTGGGAGGTGGTTTTGAAAGAACAGCATAATCTATGA
Protein sequence

>Msa0764710

MDPAYHLPEIWQSRRPQFSPSFGDFPMEDLSTEQKPLNHGRKSRIETKENSVKCVSTGNGGGRGNSNNVNDDGGSGDGKRSKTSGNSKGEENSSGKHAEETSVEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPTPGIEAFPLKTFDQKHMIQPPYHSLHKLQESTAEVHHQSGYICSWEVVLKEQHNL*