AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0766620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766620 MtrunA17_Chr5g0417821 91.753 291 21 3 5 294 1 289 2.44e-175 486
Msa0766620 MtrunA17_Chr4g0042671 41.018 334 118 7 9 265 10 341 1.05e-73 231
Msa0766620 MtrunA17_Chr6g0453471 63.871 155 50 1 9 157 10 164 9.14e-72 225
Msa0766620 MtrunA17_Chr7g0217741 61.963 163 57 2 9 167 10 171 7.64e-71 221
Msa0766620 MtrunA17_Chr8g0349261 59.146 164 58 3 1 159 7 166 1.69e-63 202
Msa0766620 MtrunA17_Chr2g0281071 70.588 119 35 0 10 128 12 130 5.84e-61 197
Msa0766620 MtrunA17_Chr4g0048511 69.748 119 36 0 10 128 12 130 3.88e-60 195
Msa0766620 MtrunA17_Chr5g0410961 66.935 124 41 0 9 132 10 133 1.67e-59 193
Msa0766620 MtrunA17_Chr3g0115821 66.116 121 41 0 10 130 11 131 3.92e-59 192
Msa0766620 MtrunA17_Chr4g0039971 65.546 119 41 0 10 128 12 130 3.79e-57 187
Msa0766620 MtrunA17_Chr2g0323411 68.908 119 37 0 10 128 11 129 5.96e-57 186
Msa0766620 MtrunA17_Chr1g0203411 52.381 168 73 3 10 177 11 171 7.60e-57 184
Msa0766620 MtrunA17_Chr5g0395281 63.636 121 44 0 10 130 11 131 4.31e-56 183
Msa0766620 MtrunA17_Chr1g0193801 63.636 132 46 1 11 140 12 143 1.06e-55 184
Msa0766620 MtrunA17_Chr1g0193371 67.480 123 40 0 11 133 12 134 2.38e-55 183
Msa0766620 MtrunA17_Chr4g0037141 52.439 164 77 1 13 176 14 176 5.62e-55 179
Msa0766620 MtrunA17_Chr7g0270891 64.800 125 44 0 11 135 12 136 1.47e-54 181
Msa0766620 MtrunA17_Chr7g0271241 63.704 135 49 0 11 145 12 146 3.28e-54 180
Msa0766620 MtrunA17_Chr4g0057031 63.866 119 43 0 9 127 10 128 4.38e-53 174
Msa0766620 MtrunA17_Chr3g0103281 61.667 120 46 0 11 130 12 131 4.64e-53 176
Msa0766620 MtrunA17_Chr1g0211161 45.238 210 94 3 1 207 7 198 7.92e-53 172
Msa0766620 MtrunA17_Chr3g0117091 52.381 168 62 3 1 168 6 155 1.67e-52 175
Msa0766620 MtrunA17_Chr8g0385321 66.957 115 38 0 13 127 14 128 3.42e-52 173
Msa0766620 MtrunA17_Chr2g0309911 63.478 115 42 0 11 125 11 125 5.14e-52 172
Msa0766620 MtrunA17_Chr4g0058631 64.957 117 41 0 11 127 12 128 5.86e-52 174
Msa0766620 MtrunA17_Chr5g0434571 57.778 135 57 0 9 143 46 180 5.41e-51 171
Msa0766620 MtrunA17_Chr5g0435101 62.931 116 43 0 11 126 11 126 1.56e-50 166
Msa0766620 MtrunA17_Chr3g0110351 63.115 122 45 0 9 130 10 131 2.11e-50 168
Msa0766620 MtrunA17_Chr1g0167691 67.290 107 35 0 10 116 11 117 2.94e-50 166
Msa0766620 MtrunA17_Chr3g0131121 64.912 114 40 0 13 126 14 127 5.62e-50 167
Msa0766620 MtrunA17_Chr2g0323351 67.593 108 35 0 10 117 11 118 1.25e-49 164
Msa0766620 MtrunA17_Chr1g0187761 66.355 107 36 0 9 115 10 116 1.32e-49 165
Msa0766620 MtrunA17_Chr4g0044421 59.200 125 47 1 1 125 6 126 1.61e-49 162
Msa0766620 MtrunA17_Chr1g0167661 67.290 107 35 0 10 116 11 117 2.53e-49 164
Msa0766620 MtrunA17_Chr7g0228891 60.504 119 47 0 9 127 10 128 2.66e-49 164
Msa0766620 MtrunA17_Chr7g0247131 60.656 122 44 1 43 160 10 131 1.18e-48 162
Msa0766620 MtrunA17_Chr7g0274581 62.617 107 40 0 9 115 10 116 1.78e-48 160
Msa0766620 MtrunA17_Chr4g0022901 62.931 116 39 1 1 116 7 118 2.97e-48 162
Msa0766620 MtrunA17_Chr7g0261281 66.355 107 36 0 9 115 10 116 3.64e-48 162
Msa0766620 MtrunA17_Chr3g0121241 57.983 119 50 0 9 127 40 158 3.73e-48 162
Msa0766620 MtrunA17_Chr6g0452271 56.303 119 52 0 11 129 12 130 5.28e-48 163
Msa0766620 MtrunA17_Chr4g0022911 64.486 107 38 0 10 116 12 118 7.10e-48 161
Msa0766620 MtrunA17_Chr2g0311221 69.697 99 30 0 11 109 14 112 2.49e-47 161
Msa0766620 MtrunA17_Chr4g0022931 61.739 115 40 1 1 115 7 117 3.56e-47 159
Msa0766620 MtrunA17_Chr3g0092401 40.984 183 95 2 9 186 11 185 4.82e-47 160
Msa0766620 MtrunA17_Chr8g0346561 61.864 118 40 1 5 117 1 118 9.63e-47 159
Msa0766620 MtrunA17_Chr7g0275911 61.682 107 41 0 9 115 10 116 6.11e-46 155
Msa0766620 MtrunA17_Chr8g0342521 61.947 113 43 0 11 123 12 124 6.57e-46 158
Msa0766620 MtrunA17_Chr2g0330041 61.404 114 44 0 11 124 12 125 1.12e-45 159
Msa0766620 MtrunA17_Chr4g0060721 58.879 107 44 0 9 115 11 117 3.79e-45 155
Msa0766620 MtrunA17_Chr7g0254411 56.410 117 49 1 9 123 10 126 4.03e-45 155
Msa0766620 MtrunA17_Chr4g0070611 55.224 134 52 1 10 143 11 136 5.81e-45 154
Msa0766620 MtrunA17_Chr8g0342541 60.177 113 45 0 11 123 12 124 8.11e-45 155
Msa0766620 MtrunA17_Chr4g0032401 59.055 127 50 1 11 135 17 143 9.39e-45 154
Msa0766620 MtrunA17_Chr7g0217221 58.491 106 44 0 10 115 11 116 9.52e-45 152
Msa0766620 MtrunA17_Chr4g0070641 64.151 106 38 0 10 115 11 116 1.26e-44 149
Msa0766620 MtrunA17_Chr8g0387421 61.905 105 40 0 11 115 12 116 1.50e-44 154
Msa0766620 MtrunA17_Chr2g0328771 64.762 105 37 0 11 115 20 124 3.31e-44 152
Msa0766620 MtrunA17_Chr4g0068061 59.813 107 43 0 9 115 10 116 1.83e-43 151
Msa0766620 MtrunA17_Chr4g0028311 59.483 116 45 2 11 125 12 126 2.74e-43 150
Msa0766620 MtrunA17_Chr6g0453211 61.000 100 39 0 10 109 11 110 3.14e-43 150
Msa0766620 MtrunA17_Chr1g0203441 59.130 115 46 1 12 126 14 127 3.61e-43 149
Msa0766620 MtrunA17_Chr5g0397231 63.636 99 36 0 11 109 12 110 8.97e-43 149
Msa0766620 MtrunA17_Chr3g0088461 62.857 105 39 0 11 115 22 126 3.88e-42 148
Msa0766620 MtrunA17_Chr4g0022891 62.136 103 39 0 10 112 11 113 5.01e-42 145
Msa0766620 MtrunA17_Chr1g0194951 55.000 120 54 0 9 128 10 129 5.75e-42 148
Msa0766620 MtrunA17_Chr1g0151941 53.226 124 54 3 11 133 12 132 5.95e-42 145
Msa0766620 MtrunA17_Chr5g0400821 59.813 107 42 1 11 116 12 118 7.70e-42 146
Msa0766620 MtrunA17_Chr1g0152011 45.342 161 81 2 11 170 12 166 8.82e-42 147
Msa0766620 MtrunA17_Chr4g0022881 59.615 104 42 0 10 113 11 114 1.27e-41 143
Msa0766620 MtrunA17_Chr3g0135311 57.944 107 44 1 11 116 12 118 2.42e-41 146
Msa0766620 MtrunA17_Chr2g0327351 65.000 100 34 1 11 109 12 111 2.88e-41 145
Msa0766620 MtrunA17_Chr6g0470971 59.434 106 43 0 12 117 15 120 5.87e-41 143
Msa0766620 MtrunA17_Chr3g0099131 60.000 110 43 1 11 120 41 149 1.22e-40 148
Msa0766620 MtrunA17_Chr8g0342481 60.748 107 41 1 11 116 12 118 1.67e-40 145
Msa0766620 MtrunA17_Chr4g0042611 71.429 77 22 0 11 87 12 88 3.18e-40 135
Msa0766620 MtrunA17_Chr7g0264641 55.963 109 47 1 11 118 12 120 9.30e-40 140
Msa0766620 MtrunA17_Chr4g0054391 61.616 99 37 1 11 108 12 110 2.40e-39 139
Msa0766620 MtrunA17_Chr1g0186061 53.333 120 52 1 12 131 21 136 3.88e-39 137
Msa0766620 MtrunA17_Chr4g0055981 53.509 114 53 0 11 124 55 168 7.79e-39 136
Msa0766620 MtrunA17_Chr8g0354661 54.955 111 50 0 4 114 30 140 1.73e-38 142
Msa0766620 MtrunA17_Chr3g0080861 54.545 110 49 1 11 120 37 145 2.79e-38 141
Msa0766620 MtrunA17_Chr1g0209661 52.252 111 53 0 11 121 27 137 2.93e-38 137
Msa0766620 MtrunA17_Chr7g0228231 57.143 105 45 0 11 115 14 118 2.98e-38 134
Msa0766620 MtrunA17_Chr1g0180391 57.143 105 45 0 11 115 19 123 6.32e-38 134
Msa0766620 MtrunA17_Chr8g0343831 59.223 103 42 0 13 115 10 112 7.11e-38 134
Msa0766620 MtrunA17_Chr1g0194291 52.679 112 53 0 10 121 20 131 1.20e-37 134
Msa0766620 MtrunA17_Chr7g0220341 31.208 298 150 10 3 288 17 271 1.71e-37 134
Msa0766620 MtrunA17_Chr1g0168661 56.311 103 45 0 12 114 22 124 1.82e-37 133
Msa0766620 MtrunA17_Chr5g0434841 52.632 114 54 0 3 116 12 125 2.03e-37 135
Msa0766620 MtrunA17_Chr1g0154031 57.692 104 44 0 11 114 76 179 2.25e-37 137
Msa0766620 MtrunA17_Chr5g0434831 52.679 112 53 0 5 116 1 112 2.51e-37 131
Msa0766620 MtrunA17_Chr5g0434931 50.000 114 57 0 3 116 27 140 2.91e-37 134
Msa0766620 MtrunA17_Chr5g0434911 50.000 114 57 0 3 116 13 126 5.62e-37 132
Msa0766620 MtrunA17_Chr6g0450101 56.190 105 46 0 11 115 14 118 9.80e-37 130
Msa0766620 MtrunA17_Chr4g0072751 58.000 100 41 1 11 109 12 111 1.64e-36 133
Msa0766620 MtrunA17_Chr2g0322521 57.658 111 46 1 10 120 28 137 5.72e-36 133
Msa0766620 MtrunA17_Chr1g0194301 44.800 125 69 0 2 126 24 148 1.02e-35 129
Msa0766620 MtrunA17_Chr7g0269831 60.748 107 42 0 9 115 10 116 1.67e-35 130
Msa0766620 MtrunA17_Chr7g0240821 55.000 100 45 0 16 115 6 105 1.90e-35 127
Msa0766620 MtrunA17_Chr6g0487491 52.174 115 46 2 11 116 12 126 1.91e-35 128
Msa0766620 MtrunA17_Chr3g0133601 60.784 102 39 1 13 114 37 137 3.94e-35 126
Msa0766620 MtrunA17_Chr4g0008551 58.654 104 42 1 13 116 38 140 5.65e-35 129
Msa0766620 MtrunA17_Chr5g0401731 53.913 115 52 1 13 127 15 128 7.22e-35 128
Msa0766620 MtrunA17_Chr7g0228991 48.696 115 59 0 2 116 20 134 7.29e-35 127
Msa0766620 MtrunA17_Chr4g0053431 59.804 102 40 1 13 114 5 105 8.20e-35 127
Msa0766620 MtrunA17_Chr5g0440781 51.786 112 52 2 12 122 13 123 1.03e-34 124
Msa0766620 MtrunA17_Chr8g0360111 51.376 109 53 0 3 111 17 125 1.37e-34 126
Msa0766620 MtrunA17_Chr2g0323321 59.091 88 36 0 10 97 10 97 2.74e-34 120
Msa0766620 MtrunA17_Chr5g0440761 51.786 112 52 2 12 122 13 123 4.51e-34 125
Msa0766620 MtrunA17_Chr5g0395221 67.949 78 25 0 10 87 11 88 4.99e-34 119
Msa0766620 MtrunA17_Chr5g0441141 51.786 112 52 2 12 122 13 123 5.74e-34 125
Msa0766620 MtrunA17_Chr6g0454921 53.211 109 50 1 13 121 15 122 9.36e-34 122
Msa0766620 MtrunA17_Chr2g0293911 49.580 119 60 0 3 121 16 134 1.33e-33 125
Msa0766620 MtrunA17_Chr4g0068921 52.381 105 50 0 9 113 22 126 2.38e-33 120
Msa0766620 MtrunA17_Chr2g0327821 42.969 128 70 1 11 135 6 133 6.14e-33 121
Msa0766620 MtrunA17_Chr1g0192411 49.565 115 57 1 6 120 7 120 2.03e-32 123
Msa0766620 MtrunA17_Chr4g0030881 47.273 110 51 1 12 114 8 117 6.00e-32 119
Msa0766620 MtrunA17_Chr4g0013361 42.767 159 82 5 11 168 10 160 1.12e-31 119
Msa0766620 MtrunA17_Chr8g0342511 63.158 76 28 0 11 86 12 87 1.19e-31 113
Msa0766620 MtrunA17_Chr3g0099141 57.647 85 36 0 11 95 40 124 2.70e-31 114
Msa0766620 MtrunA17_Chr8g0342531 61.538 78 30 0 11 88 12 89 2.94e-31 114
Msa0766620 MtrunA17_Chr8g0334881 48.624 109 54 2 11 118 10 117 8.22e-31 117
Msa0766620 MtrunA17_Chr5g0441131 47.458 118 60 2 6 122 4 120 9.01e-31 114
Msa0766620 MtrunA17_Chr8g0342461 62.338 77 28 1 13 88 14 90 7.94e-30 110
Msa0766620 MtrunA17_Chr2g0294811 54.023 87 40 0 9 95 10 96 1.94e-29 108
Msa0766620 MtrunA17_Chr8g0342471 62.338 77 28 1 13 88 14 90 2.29e-29 108
Msa0766620 MtrunA17_Chr6g0453751 55.435 92 32 2 10 92 19 110 9.23e-28 104
Msa0766620 MtrunA17_Chr5g0437321 53.535 99 45 1 13 111 19 116 1.08e-27 108
Msa0766620 MtrunA17_Chr7g0238631 49.524 105 52 1 11 115 111 214 1.34e-27 112
Msa0766620 MtrunA17_Chr3g0093811 52.874 87 41 0 43 129 14 100 3.90e-27 106
Msa0766620 MtrunA17_Chr5g0429661 45.192 104 56 1 11 114 120 222 5.14e-26 105
Msa0766620 MtrunA17_Chr3g0117511 44.643 112 59 2 4 114 174 283 9.86e-26 105
Msa0766620 MtrunA17_Chr3g0139671 43.810 105 58 1 11 115 83 186 1.41e-25 106
Msa0766620 MtrunA17_Chr1g0157731 45.714 105 56 1 11 115 89 192 1.46e-25 106
Msa0766620 MtrunA17_Chr7g0229131 41.606 137 65 3 43 179 4 125 8.39e-25 97.8
Msa0766620 MtrunA17_Chr4g0042501 46.078 102 54 1 13 114 105 205 1.13e-24 102
Msa0766620 MtrunA17_Chr5g0417621 44.660 103 56 1 13 115 134 235 2.29e-24 102
Msa0766620 MtrunA17_Chr4g0042621 62.025 79 20 2 87 157 14 90 2.78e-24 100
Msa0766620 MtrunA17_Chr5g0425591 49.451 91 45 1 3 92 1 91 3.33e-24 94.0
Msa0766620 MtrunA17_Chr4g0058991 43.478 115 58 2 3 114 199 309 5.06e-24 101
Msa0766620 MtrunA17_Chr6g0460661 45.714 105 55 2 13 117 16 118 5.99e-24 95.5
Msa0766620 MtrunA17_Chr7g0229101 60.000 70 28 0 43 112 4 73 8.18e-24 96.3
Msa0766620 MtrunA17_Chr6g0480581 47.423 97 48 2 13 108 4 98 1.41e-23 96.7
Msa0766620 MtrunA17_Chr3g0125801 48.958 96 48 1 13 108 16 110 1.84e-23 97.4
Msa0766620 MtrunA17_Chr5g0434901 58.824 68 28 0 45 112 7 74 9.82e-23 90.9
Msa0766620 MtrunA17_Chr7g0254261 45.098 102 55 1 13 114 89 189 1.50e-22 95.9
Msa0766620 MtrunA17_Chr7g0228531 32.512 203 119 6 7 204 214 403 1.70e-22 96.7
Msa0766620 MtrunA17_Chr6g0460671 47.368 95 49 1 13 107 99 192 1.80e-22 95.5
Msa0766620 MtrunA17_Chr5g0397841 43.878 98 54 1 11 108 108 204 9.97e-21 91.7
Msa0766620 MtrunA17_Chr7g0228481 32.020 203 120 7 7 204 214 403 1.68e-19 87.8
Msa0766620 MtrunA17_Chr7g0228401 35.385 130 77 2 24 153 290 412 1.84e-19 88.2
Msa0766620 MtrunA17_Chr7g0238651 44.211 95 51 1 16 108 10 104 9.76e-18 82.4
Msa0766620 MtrunA17_Chr1g0177901 55.556 63 28 0 47 109 27 89 1.62e-17 79.3
Msa0766620 MtrunA17_Chr5g0416341 34.454 119 77 1 16 134 29 146 1.18e-16 79.7
Msa0766620 MtrunA17_Chr7g0233061 49.206 63 32 0 47 109 211 273 1.79e-15 75.9
Msa0766620 MtrunA17_Chr8g0362231 34.343 99 64 1 16 114 25 122 1.17e-14 73.9
Msa0766620 MtrunA17_Chr5g0395231 51.852 54 26 0 77 130 5 58 9.99e-14 69.3
Msa0766620 MtrunA17_Chr1g0193901 47.619 84 42 2 11 92 11 94 4.63e-13 64.7
Msa0766620 MtrunA17_Chr1g0193891 47.619 84 42 2 11 92 11 94 4.63e-13 64.7
Msa0766620 MtrunA17_Chr1g0193871 47.619 84 42 2 11 92 11 94 4.63e-13 64.7
Msa0766620 MtrunA17_Chr1g0193881 47.619 84 42 2 11 92 11 94 4.63e-13 64.7
Msa0766620 MtrunA17_Chr7g0274481 34.483 87 56 1 11 97 5 90 3.79e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766620 AT5G15310.1 44.444 297 141 8 9 286 10 301 1.26e-72 226
Msa0766620 AT5G15310.2 66.667 153 47 2 9 157 10 162 1.70e-71 223
Msa0766620 AT5G15310.4 66.667 153 47 2 9 157 10 162 2.39e-71 221
Msa0766620 AT3G01140.2 65.132 152 49 1 10 157 11 162 7.35e-71 223
Msa0766620 AT3G01140.1 65.132 152 49 1 10 157 54 205 2.36e-70 223
Msa0766620 AT3G61250.1 57.516 153 63 1 9 159 10 162 5.50e-63 201
Msa0766620 AT4G05100.1 70.588 119 35 0 10 128 12 130 1.95e-61 197
Msa0766620 AT3G02940.2 67.742 124 40 0 10 133 11 134 2.49e-61 197
Msa0766620 AT3G02940.1 67.742 124 40 0 10 133 11 134 3.78e-61 197
Msa0766620 AT3G02940.3 67.742 124 40 0 10 133 11 134 3.78e-61 197
Msa0766620 AT4G21440.1 43.590 234 107 3 10 222 11 240 2.70e-60 196
Msa0766620 AT4G28110.1 69.748 119 36 0 10 128 11 129 1.47e-59 191
Msa0766620 AT5G10280.1 66.942 121 40 0 10 130 11 131 4.55e-59 192
Msa0766620 AT5G16770.4 65.323 124 43 0 10 133 11 134 8.69e-59 191
Msa0766620 AT5G16770.3 65.323 124 43 0 10 133 11 134 8.69e-59 191
Msa0766620 AT5G65230.1 65.873 126 43 0 6 131 7 132 1.17e-58 190
Msa0766620 AT5G16770.1 65.323 124 43 0 10 133 11 134 1.76e-58 191
Msa0766620 AT5G16770.2 65.323 124 43 0 10 133 11 134 1.76e-58 191
Msa0766620 AT5G54230.1 68.333 120 38 0 11 130 12 131 2.92e-58 189
Msa0766620 AT1G34670.1 47.525 202 86 4 10 208 11 195 4.79e-58 190
Msa0766620 AT4G17785.2 65.574 122 42 0 10 131 12 133 2.67e-57 188
Msa0766620 AT1G57560.2 65.625 128 44 0 11 138 12 139 3.35e-57 185
Msa0766620 AT4G17785.1 65.574 122 42 0 10 131 12 133 3.67e-57 188
Msa0766620 AT5G61420.2 65.323 124 43 0 10 133 11 134 7.46e-57 187
Msa0766620 AT1G57560.1 64.925 134 43 1 11 140 12 145 8.74e-57 185
Msa0766620 AT5G60890.1 68.644 118 37 0 10 127 11 128 1.60e-56 184
Msa0766620 AT1G74080.1 68.333 120 38 0 7 126 8 127 1.66e-56 185
Msa0766620 AT1G18570.1 64.286 126 45 0 9 134 11 136 2.95e-56 185
Msa0766620 AT5G07690.1 64.286 126 45 0 10 135 11 136 3.21e-56 184
Msa0766620 AT5G07700.1 65.041 123 43 0 10 132 11 133 1.50e-55 183
Msa0766620 AT5G07700.2 65.041 123 43 0 10 132 11 133 1.50e-55 183
Msa0766620 AT5G26660.1 69.231 117 36 0 11 127 12 128 1.53e-54 181
Msa0766620 AT4G38620.1 58.955 134 54 1 13 145 14 147 3.94e-54 177
Msa0766620 AT4G22680.1 66.387 119 40 0 9 127 10 128 4.43e-54 177
Msa0766620 AT1G09540.1 67.227 119 39 0 11 129 12 130 7.36e-54 179
Msa0766620 AT1G74430.1 60.163 123 49 0 10 132 11 133 7.36e-54 176
Msa0766620 AT4G12350.1 65.546 119 41 0 9 127 10 128 1.39e-53 176
Msa0766620 AT4G34990.1 66.957 115 38 0 13 127 14 128 1.67e-53 176
Msa0766620 AT4G01680.3 67.241 116 38 0 11 126 12 127 5.79e-53 173
Msa0766620 AT3G23250.1 48.315 178 86 2 9 184 10 183 1.66e-52 174
Msa0766620 AT1G18710.1 62.712 118 44 0 10 127 11 128 1.93e-52 173
Msa0766620 AT5G16600.1 65.289 121 42 0 9 129 10 130 2.77e-52 174
Msa0766620 AT4G01680.1 67.241 116 38 0 11 126 12 127 2.79e-52 174
Msa0766620 AT3G13540.1 43.367 196 101 2 9 204 21 206 4.01e-52 171
Msa0766620 AT5G56110.1 60.833 120 47 0 11 130 12 131 4.53e-52 173
Msa0766620 AT2G16720.1 63.793 116 42 0 11 126 12 127 8.62e-52 171
Msa0766620 AT4G09460.1 64.035 114 41 0 13 126 14 127 4.29e-51 168
Msa0766620 AT1G06180.1 61.364 132 42 1 9 140 10 132 4.42e-51 169
Msa0766620 AT3G12720.1 62.609 115 43 0 11 125 22 136 7.66e-51 170
Msa0766620 AT1G22640.1 62.069 116 44 0 11 126 12 127 2.37e-50 167
Msa0766620 AT1G66230.1 59.055 127 52 0 9 135 10 136 6.63e-50 167
Msa0766620 AT1G35515.1 60.870 115 45 0 11 125 12 126 4.28e-49 162
Msa0766620 AT2G31180.1 66.355 107 36 0 9 115 10 116 5.84e-49 163
Msa0766620 AT4G01680.2 60.938 128 38 1 11 126 12 139 7.18e-49 166
Msa0766620 AT1G56160.1 67.619 105 34 0 11 115 14 118 1.70e-48 163
Msa0766620 AT1G79180.1 66.355 107 36 0 11 117 14 120 2.30e-48 163
Msa0766620 AT1G16490.1 67.619 105 34 0 11 115 14 118 5.90e-48 161
Msa0766620 AT5G62470.2 50.000 150 69 3 9 155 10 156 2.50e-47 162
Msa0766620 AT5G62320.1 57.600 125 46 1 9 126 11 135 3.22e-47 159
Msa0766620 AT3G47600.1 59.091 110 45 0 9 118 10 119 1.60e-46 159
Msa0766620 AT5G14340.1 52.308 130 62 0 9 138 22 151 3.22e-46 157
Msa0766620 AT1G63910.1 58.974 117 48 0 11 127 12 128 1.45e-45 158
Msa0766620 AT1G74650.1 59.091 110 45 0 9 118 10 119 1.83e-45 157
Msa0766620 AT1G08810.1 60.748 107 42 0 9 115 10 116 2.03e-45 155
Msa0766620 AT5G35550.1 58.462 130 47 2 11 137 14 139 7.03e-45 153
Msa0766620 AT5G62470.1 49.333 150 69 4 9 155 10 155 9.90e-45 155
Msa0766620 AT3G13890.2 63.208 106 39 0 11 116 12 117 1.12e-44 155
Msa0766620 AT3G12820.1 61.682 107 41 0 11 117 14 120 3.75e-44 150
Msa0766620 AT3G28910.1 56.250 112 49 0 10 121 11 122 5.03e-44 152
Msa0766620 AT5G12870.1 62.963 108 40 0 11 118 18 125 1.05e-43 150
Msa0766620 AT3G28470.1 57.983 119 50 0 11 129 12 130 6.67e-43 149
Msa0766620 AT1G79180.2 50.714 140 36 1 11 117 14 153 9.96e-42 147
Msa0766620 AT3G13890.1 58.261 115 39 1 11 116 12 126 1.32e-41 147
Msa0766620 AT5G49330.1 56.034 116 46 1 5 115 1 116 1.38e-41 147
Msa0766620 AT5G23000.1 59.813 107 42 1 11 116 12 118 2.53e-41 145
Msa0766620 AT3G62610.1 58.879 107 44 0 9 115 10 116 3.89e-41 145
Msa0766620 AT3G08500.1 62.857 105 39 0 11 115 30 134 6.81e-41 145
Msa0766620 AT5G57620.1 58.879 107 43 1 11 116 12 118 1.94e-40 144
Msa0766620 AT2G36890.1 56.034 116 50 1 11 125 12 127 2.14e-40 142
Msa0766620 AT5G65790.1 59.813 107 42 1 11 116 12 118 2.26e-40 144
Msa0766620 AT2G36890.2 53.077 130 55 2 2 125 39 168 2.56e-40 143
Msa0766620 AT5G14750.1 55.769 104 46 0 12 115 17 120 2.65e-40 139
Msa0766620 AT5G40350.1 56.881 109 47 0 11 119 17 125 3.65e-40 139
Msa0766620 AT4G26930.1 35.273 275 148 9 11 269 19 279 3.99e-40 144
Msa0766620 AT3G49690.1 58.879 107 43 1 11 116 12 118 5.03e-40 142
Msa0766620 AT4G37780.1 53.390 118 49 2 5 116 1 118 5.25e-40 142
Msa0766620 AT5G40330.1 54.808 104 47 0 12 115 13 116 1.89e-39 138
Msa0766620 AT5G55020.1 58.182 110 45 1 11 120 26 134 2.02e-39 144
Msa0766620 AT2G26960.1 57.273 110 46 1 11 120 20 128 2.80e-39 142
Msa0766620 AT4G25560.1 56.604 106 46 0 12 117 11 116 3.62e-39 139
Msa0766620 AT2G47460.1 56.075 107 47 0 9 115 10 116 4.09e-39 141
Msa0766620 AT5G26660.2 72.093 86 24 0 42 127 12 97 8.07e-39 139
Msa0766620 AT5G52260.1 60.377 106 42 0 12 117 13 118 1.00e-38 137
Msa0766620 AT5G06100.1 56.757 111 47 1 10 120 31 140 1.69e-38 141
Msa0766620 AT2G32460.1 53.846 117 53 1 10 126 17 132 3.52e-38 140
Msa0766620 AT2G32460.2 53.846 117 53 1 10 126 5 120 4.19e-38 140
Msa0766620 AT3G48920.1 55.882 102 45 0 12 113 19 120 4.23e-38 135
Msa0766620 AT5G06100.5 58.095 105 44 0 10 114 31 135 4.86e-38 140
Msa0766620 AT5G06100.2 58.095 105 44 0 10 114 31 135 4.86e-38 140
Msa0766620 AT5G06100.3 58.095 105 44 0 10 114 31 135 4.86e-38 140
Msa0766620 AT5G06100.4 58.095 105 44 0 10 114 31 135 4.86e-38 140
Msa0766620 AT3G27920.1 52.381 105 50 0 12 116 15 119 6.17e-38 134
Msa0766620 AT3G27810.1 52.632 114 54 0 11 124 20 133 1.03e-37 133
Msa0766620 AT3G24310.1 57.143 105 45 0 10 114 17 121 1.17e-37 134
Msa0766620 AT3G53200.1 56.731 104 45 0 11 114 9 112 1.24e-37 134
Msa0766620 AT3G30210.1 57.692 104 44 0 10 113 26 129 1.30e-37 134
Msa0766620 AT3G11440.2 53.509 114 52 1 1 114 32 144 1.33e-37 139
Msa0766620 AT3G01530.1 55.238 105 47 0 11 115 25 129 1.68e-37 132
Msa0766620 AT4G13480.1 52.033 123 49 1 12 134 7 119 2.07e-37 134
Msa0766620 AT3G11440.3 53.509 114 52 1 1 114 32 144 3.59e-37 139
Msa0766620 AT3G11440.4 53.509 114 52 1 1 114 32 144 3.59e-37 139
Msa0766620 AT3G11440.1 53.509 114 52 1 1 114 32 144 3.59e-37 139
Msa0766620 AT1G48000.1 53.333 105 49 0 9 113 30 134 3.76e-37 132
Msa0766620 AT5G52600.1 55.769 104 46 0 11 114 12 115 7.17e-37 130
Msa0766620 AT1G25340.1 48.696 115 59 0 12 126 19 133 9.36e-37 132
Msa0766620 AT2G47190.1 49.550 111 56 0 11 121 20 130 1.50e-36 132
Msa0766620 AT1G68320.1 47.414 116 61 0 11 126 19 134 5.64e-35 128
Msa0766620 AT3G06490.1 48.387 124 64 0 5 128 13 136 5.04e-34 126
Msa0766620 AT1G66370.1 51.429 105 51 0 10 114 7 111 8.97e-34 124
Msa0766620 AT3G46130.1 48.214 112 58 0 3 114 1 112 1.58e-33 123
Msa0766620 AT2G23290.1 58.824 102 41 1 13 114 13 113 2.24e-33 124
Msa0766620 AT4G37260.1 58.824 102 41 1 13 114 13 113 3.24e-33 124
Msa0766620 AT5G49620.1 46.400 125 67 0 4 128 19 143 3.51e-33 124
Msa0766620 AT5G35550.2 51.938 129 53 3 44 169 50 172 5.68e-33 122
Msa0766620 AT3G60460.1 51.376 109 51 2 11 118 11 118 1.89e-32 122
Msa0766620 AT5G59780.3 49.515 103 52 0 12 114 9 111 2.38e-32 120
Msa0766620 AT2G39880.1 57.843 102 42 1 13 114 50 150 3.20e-32 122
Msa0766620 AT5G67300.1 54.902 102 45 1 13 114 6 106 4.82e-32 120
Msa0766620 AT1G25340.2 46.087 115 57 1 12 126 19 128 6.68e-32 120
Msa0766620 AT1G66380.1 54.286 105 48 0 10 114 7 111 7.64e-32 115
Msa0766620 AT1G25340.3 42.754 138 64 2 12 139 19 151 1.47e-31 119
Msa0766620 AT2G26950.1 49.091 110 55 1 11 120 16 124 2.58e-31 120
Msa0766620 AT3G09230.1 55.769 104 45 1 13 116 55 157 3.08e-31 120
Msa0766620 AT3G50060.1 52.941 102 47 1 13 114 6 106 4.79e-31 118
Msa0766620 AT1G56650.1 46.565 131 62 1 10 132 7 137 1.13e-30 115
Msa0766620 AT1G66390.1 52.381 105 50 0 10 114 7 111 5.22e-30 114
Msa0766620 AT3G55730.1 41.463 164 75 3 13 156 56 218 8.75e-30 116
Msa0766620 AT5G49620.2 41.727 139 67 1 4 128 19 157 1.15e-29 115
Msa0766620 AT3G47600.2 64.000 75 27 0 44 118 39 113 1.93e-29 114
Msa0766620 AT3G12820.2 69.014 71 22 0 47 117 2 72 2.13e-29 110
Msa0766620 AT5G40350.2 61.842 76 29 0 44 119 5 80 1.34e-28 108
Msa0766620 AT5G14750.3 59.740 77 28 1 39 115 13 86 1.47e-28 108
Msa0766620 AT3G53200.2 65.753 73 25 0 42 114 7 79 2.58e-28 108
Msa0766620 AT5G58850.1 44.800 125 63 2 11 135 103 221 4.51e-28 112
Msa0766620 AT1G22640.3 65.714 70 24 0 57 126 1 70 8.04e-28 107
Msa0766620 AT1G71030.2 54.217 83 38 0 50 132 5 87 2.48e-27 105
Msa0766620 AT1G71030.1 54.217 83 38 0 50 132 19 101 3.39e-27 105
Msa0766620 AT3G27810.2 55.556 81 36 0 44 124 4 84 1.36e-26 103
Msa0766620 AT5G11050.1 47.059 102 53 1 13 114 105 205 3.37e-26 107
Msa0766620 AT5G02320.1 46.667 105 55 1 11 115 125 228 3.92e-26 108
Msa0766620 AT5G02320.2 46.667 105 55 1 11 115 125 228 3.92e-26 108
Msa0766620 AT5G02320.3 46.667 105 55 1 11 115 65 168 4.18e-26 107
Msa0766620 AT1G69560.1 36.076 158 89 2 6 152 100 256 5.48e-26 105
Msa0766620 AT4G32730.5 46.667 105 55 1 11 115 85 188 5.96e-26 108
Msa0766620 AT4G32730.4 46.667 105 55 1 11 115 85 188 5.96e-26 108
Msa0766620 AT4G32730.3 46.667 105 55 1 11 115 85 188 5.96e-26 108
Msa0766620 AT4G32730.2 46.667 105 55 1 11 115 85 188 5.96e-26 108
Msa0766620 AT1G69560.2 36.076 158 89 2 6 152 116 272 6.05e-26 105
Msa0766620 AT4G32730.1 46.667 105 55 1 11 115 85 188 7.72e-26 107
Msa0766620 AT5G40360.1 45.714 105 55 2 11 115 156 258 1.06e-25 105
Msa0766620 AT3G09370.3 47.222 108 48 2 11 114 141 243 1.37e-25 106
Msa0766620 AT3G09370.2 47.222 108 48 2 11 114 133 235 1.43e-25 106
Msa0766620 AT4G18770.1 43.750 112 62 1 4 115 208 318 1.44e-25 105
Msa0766620 AT3G09370.1 47.222 108 48 2 11 114 128 230 1.45e-25 106
Msa0766620 AT1G18960.1 41.525 118 66 2 13 130 10 124 2.41e-25 103
Msa0766620 AT3G27785.1 42.105 114 65 1 4 117 180 292 5.97e-25 103
Msa0766620 AT1G17950.1 45.098 102 55 1 13 114 5 105 6.12e-25 100
Msa0766620 AT5G59780.2 56.164 73 32 0 42 114 18 90 1.01e-24 99.4
Msa0766620 AT1G26780.1 47.115 104 54 1 11 114 96 198 1.17e-24 100
Msa0766620 AT1G26780.2 47.115 104 54 1 11 114 96 198 1.44e-24 102
Msa0766620 AT3G46130.4 56.164 73 32 0 42 114 18 90 2.20e-24 99.0
Msa0766620 AT3G46130.3 55.556 72 32 0 43 114 9 80 4.70e-24 97.8
Msa0766620 AT5G11510.3 40.952 105 61 1 11 115 79 182 7.04e-24 102
Msa0766620 AT5G11510.1 40.952 105 61 1 11 115 79 182 7.04e-24 102
Msa0766620 AT5G11510.4 40.952 105 61 1 11 115 79 182 7.04e-24 102
Msa0766620 AT5G11510.5 40.952 105 61 1 11 115 79 182 8.44e-24 101
Msa0766620 AT5G11510.2 40.952 105 61 1 11 115 79 182 9.40e-24 101
Msa0766620 AT5G17800.1 47.059 102 53 1 13 114 93 193 1.06e-23 99.0
Msa0766620 AT3G23250.2 43.077 130 68 2 57 184 1 126 5.02e-23 95.1
Msa0766620 AT1G73410.1 46.078 102 54 1 13 114 6 106 5.67e-23 95.1
Msa0766620 AT1G73410.2 46.078 102 54 1 13 114 6 106 7.75e-23 94.0
Msa0766620 AT5G15310.3 34.081 223 123 8 83 286 5 222 8.52e-23 94.7
Msa0766620 AT4G33450.1 41.748 103 59 1 12 114 18 119 9.80e-23 94.7
Msa0766620 AT3G29020.1 43.269 104 56 2 13 115 65 166 6.70e-22 92.0
Msa0766620 AT3G29020.2 43.269 104 56 2 13 115 67 168 2.31e-21 92.0
Msa0766620 AT1G66380.2 51.190 84 41 0 10 93 7 90 3.46e-21 86.7
Msa0766620 AT5G39700.1 44.231 104 56 2 14 117 57 158 4.81e-21 89.0
Msa0766620 AT1G66380.3 59.722 72 29 0 43 114 7 78 8.00e-21 85.9
Msa0766620 AT4G00540.2 42.593 108 58 2 11 115 101 207 2.95e-19 87.4
Msa0766620 AT4G00540.1 42.593 108 58 2 11 115 99 205 5.00e-19 87.0
Msa0766620 AT5G14750.4 55.932 59 26 0 57 115 1 59 6.78e-19 81.6
Msa0766620 AT5G14750.2 55.932 59 26 0 57 115 1 59 6.78e-19 81.6
Msa0766620 AT2G25230.1 43.000 100 55 2 16 115 29 126 1.28e-18 83.2
Msa0766620 AT5G61420.1 66.667 54 18 0 80 133 2 55 3.38e-18 83.2
Msa0766620 AT2G02820.3 40.404 99 58 1 16 114 33 130 4.55e-18 83.6
Msa0766620 AT2G02820.1 40.404 99 58 1 16 114 33 130 7.38e-18 83.6
Msa0766620 AT2G02820.2 40.404 99 58 1 16 114 33 130 8.47e-18 83.6
Msa0766620 AT2G37630.1 45.263 95 50 1 16 108 7 101 1.03e-17 82.8
Msa0766620 AT1G14350.2 40.404 99 58 1 16 114 28 125 1.43e-17 82.8
Msa0766620 AT1G14350.1 40.404 99 58 1 16 114 28 125 1.43e-17 82.8
Msa0766620 AT4G28110.2 71.429 42 12 0 87 128 4 45 1.20e-15 74.3
Msa0766620 AT5G40430.1 36.190 105 64 3 11 115 52 153 1.28e-14 72.4
Msa0766620 AT3G18100.1 39.583 96 57 1 12 107 545 639 1.41e-14 74.3
Msa0766620 AT3G18100.3 39.583 96 57 1 12 107 497 591 1.47e-14 74.3
Msa0766620 AT3G18100.2 39.583 96 57 1 12 107 332 426 1.95e-14 73.9
Msa0766620 AT3G18100.4 39.583 96 57 1 12 107 384 478 2.04e-14 73.9
Msa0766620 AT4G25560.2 58.333 48 20 0 70 117 3 50 7.87e-13 67.0
Msa0766620 AT1G74430.2 49.123 57 29 0 76 132 8 64 2.37e-12 65.1
Msa0766620 AT1G74650.3 61.905 42 16 0 77 118 2 43 3.91e-12 65.5
Msa0766620 AT1G09770.1 35.632 87 55 1 11 97 5 90 2.64e-11 64.7
Msa0766620 AT3G28910.2 55.556 45 20 0 77 121 2 46 3.77e-11 62.4
Msa0766620 AT5G14340.2 60.976 41 16 0 87 127 10 50 4.34e-11 61.2
Msa0766620 AT1G14350.3 45.000 60 33 0 55 114 23 82 6.75e-11 62.8
Msa0766620 AT1G14350.4 45.000 60 33 0 55 114 23 82 6.75e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGCTTCTTGTCTTCTTT+TGG 0.163262 5_2:-28528191 None:intergenic
TTGTTGTTGTTGTTAGATTT+TGG 0.239668 5_2:-28529642 None:intergenic
TTCATAGACTTCAATGGAAA+TGG 0.323459 5_2:+28530086 Msa0766620:CDS
TGCTGTAATGTTACCTGCTC+TGG 0.350524 5_2:-28528261 None:intergenic
CTCAACATGGCCATAGAAAC+TGG 0.356479 5_2:+28528225 Msa0766620:CDS
GCAAAGAATGCCAGTTTCTA+TGG 0.366432 5_2:-28528235 None:intergenic
CATTATCTGTTCTCCTTGGC+AGG 0.386660 5_2:-28529545 None:intergenic
GTAAGACAAGGAAGCTCATT+AGG 0.387716 5_2:-28529894 None:intergenic
ATTCAGCTTCATGCACTTCT+CGG 0.394016 5_2:+28528460 Msa0766620:CDS
GAAGCAAGATCATCAATGTT+AGG 0.403364 5_2:+28529726 Msa0766620:CDS
AAGAAAAGACTTATCAGAAT+GGG 0.406171 5_2:+28529597 Msa0766620:CDS
ATACATTGCATTGTTGTGTT+TGG 0.412941 5_2:-28529805 None:intergenic
TTCTCCGAACTTCAACTCAT+TGG 0.422084 5_2:-28529916 None:intergenic
GACACTTTCATAGACTTCAA+TGG 0.425622 5_2:+28530080 Msa0766620:CDS
GCATTTGGAGATTCCTTCAA+TGG 0.428480 5_2:+28530053 Msa0766620:CDS
CTTACCAATGAGTTGAAGTT+CGG 0.429783 5_2:+28529912 Msa0766620:CDS
ATAATGAAATAAAGAATCAT+TGG 0.440805 5_2:+28529562 Msa0766620:CDS
TTCAGCTTCATGCACTTCTC+GGG 0.444052 5_2:+28528461 Msa0766620:CDS
CTATCAAACACGTGGCTCAA+TGG 0.446074 5_2:+28529682 Msa0766620:CDS
ATTTCATTATCTGTTCTCCT+TGG 0.449445 5_2:-28529549 None:intergenic
TATCAAACACGTGGCTCAAT+GGG 0.451135 5_2:+28529683 Msa0766620:CDS
ATGGTGGCATTGGATGCATT+TGG 0.456791 5_2:+28530038 Msa0766620:CDS
TTGAAGTTCGGAGAAGGCTT+AGG 0.459115 5_2:+28529924 Msa0766620:CDS
GAAAGTGTCAGTACCATTGA+AGG 0.460200 5_2:-28530066 None:intergenic
TTGAAAATGAGTAGGGCTCT+AGG 0.461511 5_2:+28528146 Msa0766620:CDS
CATTCTTTGCCCTCCAGAGC+AGG 0.475255 5_2:+28528248 Msa0766620:CDS
ATCATTATTTGCAAGCATGA+TGG 0.476845 5_2:-28529838 None:intergenic
GCAAGGTGATGATGATCTAA+TGG 0.487418 5_2:+28530019 Msa0766620:CDS
CAAGAAAAGACTTATCAGAA+TGG 0.489082 5_2:+28529596 Msa0766620:CDS
TGGCAGGAGAGCTGCTATTG+TGG 0.496430 5_2:-28529529 None:intergenic
TTGTGATTTGAAAATGAGTA+GGG 0.505830 5_2:+28528139 None:intergenic
TATATAGGTCTTAGAAGATG+TGG 0.511267 5_2:+28528352 Msa0766620:intron
TGTTAGTAATAATAATATCA+TGG 0.514632 5_2:+28529959 Msa0766620:CDS
TGATGATCTAATGGTGGCAT+TGG 0.519218 5_2:+28530028 Msa0766620:CDS
TGAAAATGAGTAGGGCTCTA+GGG 0.531154 5_2:+28528147 Msa0766620:CDS
TTTGTGATTTGAAAATGAGT+AGG 0.538258 5_2:+28528138 None:intergenic
AATGAGTTGAAGTTCGGAGA+AGG 0.564111 5_2:+28529918 Msa0766620:CDS
CAATAGCAGCTCTCCTGCCA+AGG 0.575828 5_2:+28529532 Msa0766620:CDS
AGGGCTCTAGGGTTGAAGAA+AGG 0.597288 5_2:+28528158 Msa0766620:CDS
TGTAATGTTACCTGCTCTGG+AGG 0.601213 5_2:-28528258 None:intergenic
GAACTTGATGAAGATAGTAA+AGG 0.608417 5_2:-28529765 None:intergenic
TTCAACTCATTGGTAAGACA+AGG 0.629099 5_2:-28529906 None:intergenic
GTTTATGTGTCTAAATTGCA+AGG 0.634915 5_2:+28530002 Msa0766620:CDS
GAAAGAGTTGCAGACTGAGG+TGG 0.635300 5_2:+28528374 Msa0766620:CDS
AGAAAAGACTTATCAGAATG+GGG 0.641194 5_2:+28529598 Msa0766620:CDS
CTCATTAGGACAGCTCAATG+TGG 0.660198 5_2:-28529880 None:intergenic
ATAGCATATGTTACTCAACA+TGG 0.670094 5_2:+28528212 Msa0766620:CDS
CAATACTGCTATCAAACACG+TGG 0.670954 5_2:+28529674 Msa0766620:CDS
ACGAGGAAACTTCAGCTCAG+AGG 0.673756 5_2:+28528423 Msa0766620:CDS
GTAATGTTACCTGCTCTGGA+GGG 0.677991 5_2:-28528257 None:intergenic
CTGAATCCTGATATAAAACG+AGG 0.681945 5_2:+28528406 Msa0766620:CDS
AAAATCTAACAACAACAACA+AGG 0.689545 5_2:+28529644 Msa0766620:CDS
TAGGGTTGAAGAAAGGACCA+TGG 0.703964 5_2:+28528165 Msa0766620:CDS
AGGTGATGATGATCTAATGG+TGG 0.729997 5_2:+28530022 Msa0766620:CDS
GTGGAAAGAGTTGCAGACTG+AGG 0.736692 5_2:+28528371 Msa0766620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAAAGAAAAATAAA+TGG + chr5_2:28528734-28528753 Msa0766620:intron 10.0%
!! TTTGAAAAAGAAAAATAAAT+GGG + chr5_2:28528735-28528754 Msa0766620:intron 10.0%
!! TAAAATTAGAAAGAAAAAAA+TGG - chr5_2:28529184-28529203 None:intergenic 10.0%
!!! TTTTGAAAAAGAAAAATAAA+TGG + chr5_2:28528734-28528753 Msa0766620:intron 10.0%
!! TTTGAAAAAGAAAAATAAAT+GGG + chr5_2:28528735-28528754 Msa0766620:intron 10.0%
!! TAAAATTAGAAAGAAAAAAA+TGG - chr5_2:28529184-28529203 None:intergenic 10.0%
!!! TTTTATCTTATACTTAAGAT+CGG - chr5_2:28528997-28529016 None:intergenic 15.0%
!! ATAATGAAATAAAGAATCAT+TGG + chr5_2:28529562-28529581 Msa0766620:CDS 15.0%
!! TGTTAGTAATAATAATATCA+TGG + chr5_2:28529959-28529978 Msa0766620:CDS 15.0%
!!! TTTTATCTTATACTTAAGAT+CGG - chr5_2:28528997-28529016 None:intergenic 15.0%
!! ATAATGAAATAAAGAATCAT+TGG + chr5_2:28529562-28529581 Msa0766620:CDS 15.0%
!! TGTTAGTAATAATAATATCA+TGG + chr5_2:28529959-28529978 Msa0766620:CDS 15.0%
!! ATATTACTCATAATTGAAGA+TGG - chr5_2:28528309-28528328 None:intergenic 20.0%
!! ATATATAAACTCAAGATTAC+TGG - chr5_2:28528337-28528356 None:intergenic 20.0%
!! GTAATCTTGAGTTTATATAT+AGG + chr5_2:28528337-28528356 Msa0766620:intron 20.0%
!! TGTATATTAACCTATTTACA+TGG + chr5_2:28528538-28528557 Msa0766620:intron 20.0%
!! ATTAATGTAACAACATCTAT+TGG + chr5_2:28528924-28528943 Msa0766620:intron 20.0%
!! AGATAAAATTGAGTCAAAAA+AGG + chr5_2:28529009-28529028 Msa0766620:intron 20.0%
!! ATCAACTTTCTTTGATATTT+AGG + chr5_2:28529054-28529073 Msa0766620:intron 20.0%
!!! AGTCAAGTCTTAATATTTTT+TGG - chr5_2:28529406-28529425 None:intergenic 20.0%
!! ATATTACTCATAATTGAAGA+TGG - chr5_2:28528309-28528328 None:intergenic 20.0%
!! ATATATAAACTCAAGATTAC+TGG - chr5_2:28528337-28528356 None:intergenic 20.0%
!! GTAATCTTGAGTTTATATAT+AGG + chr5_2:28528337-28528356 Msa0766620:intron 20.0%
!! TGTATATTAACCTATTTACA+TGG + chr5_2:28528538-28528557 Msa0766620:intron 20.0%
!! ATTAATGTAACAACATCTAT+TGG + chr5_2:28528924-28528943 Msa0766620:intron 20.0%
!! AGATAAAATTGAGTCAAAAA+AGG + chr5_2:28529009-28529028 Msa0766620:intron 20.0%
!! ATCAACTTTCTTTGATATTT+AGG + chr5_2:28529054-28529073 Msa0766620:intron 20.0%
!!! AGTCAAGTCTTAATATTTTT+TGG - chr5_2:28529406-28529425 None:intergenic 20.0%
! CTTTCTTCATATTCTCTATT+TGG + chr5_2:28528508-28528527 Msa0766620:intron 25.0%
!!! TCTCAAAGTTTTAGAGTTTT+TGG - chr5_2:28528639-28528658 None:intergenic 25.0%
!! TGATAACTTTGTATTTTCGT+TGG - chr5_2:28528788-28528807 None:intergenic 25.0%
! TTGATACAATGATACTAACA+CGG + chr5_2:28528865-28528884 Msa0766620:intron 25.0%
!!! TTTTTTTAATCGACAGTATC+TGG - chr5_2:28529131-28529150 None:intergenic 25.0%
! GACAATGCATAATATATGTA+AGG + chr5_2:28529351-28529370 Msa0766620:intron 25.0%
!!! CAAGTCTTAATATTTTTTGG+TGG - chr5_2:28529403-28529422 None:intergenic 25.0%
! TTGATAAAGAGTAATGTTCA+TGG + chr5_2:28529477-28529496 Msa0766620:intron 25.0%
! AAGAAAAGACTTATCAGAAT+GGG + chr5_2:28529597-28529616 Msa0766620:CDS 25.0%
!!! TTGTTGTTGTTGTTAGATTT+TGG - chr5_2:28529645-28529664 None:intergenic 25.0%
! AAAATCTAACAACAACAACA+AGG + chr5_2:28529644-28529663 Msa0766620:CDS 25.0%
! CTTTCTTCATATTCTCTATT+TGG + chr5_2:28528508-28528527 Msa0766620:intron 25.0%
!!! TCTCAAAGTTTTAGAGTTTT+TGG - chr5_2:28528639-28528658 None:intergenic 25.0%
!! TGATAACTTTGTATTTTCGT+TGG - chr5_2:28528788-28528807 None:intergenic 25.0%
! TTGATACAATGATACTAACA+CGG + chr5_2:28528865-28528884 Msa0766620:intron 25.0%
!!! TTTTTTTAATCGACAGTATC+TGG - chr5_2:28529131-28529150 None:intergenic 25.0%
! GACAATGCATAATATATGTA+AGG + chr5_2:28529351-28529370 Msa0766620:intron 25.0%
!!! CAAGTCTTAATATTTTTTGG+TGG - chr5_2:28529403-28529422 None:intergenic 25.0%
! TTGATAAAGAGTAATGTTCA+TGG + chr5_2:28529477-28529496 Msa0766620:intron 25.0%
! AAGAAAAGACTTATCAGAAT+GGG + chr5_2:28529597-28529616 Msa0766620:CDS 25.0%
!!! TTGTTGTTGTTGTTAGATTT+TGG - chr5_2:28529645-28529664 None:intergenic 25.0%
! AAAATCTAACAACAACAACA+AGG + chr5_2:28529644-28529663 Msa0766620:CDS 25.0%
! TAAGCTTCTTGTCTTCTTTT+GGG - chr5_2:28528193-28528212 None:intergenic 30.0%
! ATAAGCTTCTTGTCTTCTTT+TGG - chr5_2:28528194-28528213 None:intergenic 30.0%
ATAGCATATGTTACTCAACA+TGG + chr5_2:28528212-28528231 Msa0766620:CDS 30.0%
TATATAGGTCTTAGAAGATG+TGG + chr5_2:28528352-28528371 Msa0766620:intron 30.0%
! AAGTTTCCTCGTTTTATATC+AGG - chr5_2:28528415-28528434 None:intergenic 30.0%
! GAACAAGTGAGATATTCTTT+TGG + chr5_2:28528483-28528502 Msa0766620:intron 30.0%
TGATACAATGATACTAACAC+GGG + chr5_2:28528866-28528885 Msa0766620:intron 30.0%
!! TCAAAGAAAGTTGATGCATT+TGG - chr5_2:28529049-28529068 None:intergenic 30.0%
ACTTACACGCAAATTAAAGT+AGG + chr5_2:28529089-28529108 Msa0766620:intron 30.0%
CTTACACGCAAATTAAAGTA+GGG + chr5_2:28529090-28529109 Msa0766620:intron 30.0%
GAACATATAATGTCAGTATC+TGG - chr5_2:28529162-28529181 None:intergenic 30.0%
TGCATAATATATGTAAGGTC+CGG + chr5_2:28529356-28529375 Msa0766620:intron 30.0%
!!! GTCTTAATATTTTTTGGTGG+TGG - chr5_2:28529400-28529419 None:intergenic 30.0%
ATTTCATTATCTGTTCTCCT+TGG - chr5_2:28529552-28529571 None:intergenic 30.0%
CAAGAAAAGACTTATCAGAA+TGG + chr5_2:28529596-28529615 Msa0766620:CDS 30.0%
AGAAAAGACTTATCAGAATG+GGG + chr5_2:28529598-28529617 Msa0766620:CDS 30.0%
GAACTTGATGAAGATAGTAA+AGG - chr5_2:28529768-28529787 None:intergenic 30.0%
ATACATTGCATTGTTGTGTT+TGG - chr5_2:28529808-28529827 None:intergenic 30.0%
ATCATTATTTGCAAGCATGA+TGG - chr5_2:28529841-28529860 None:intergenic 30.0%
GTTTATGTGTCTAAATTGCA+AGG + chr5_2:28530002-28530021 Msa0766620:CDS 30.0%
TTCATAGACTTCAATGGAAA+TGG + chr5_2:28530086-28530105 Msa0766620:CDS 30.0%
! TAAGCTTCTTGTCTTCTTTT+GGG - chr5_2:28528193-28528212 None:intergenic 30.0%
! ATAAGCTTCTTGTCTTCTTT+TGG - chr5_2:28528194-28528213 None:intergenic 30.0%
ATAGCATATGTTACTCAACA+TGG + chr5_2:28528212-28528231 Msa0766620:CDS 30.0%
TATATAGGTCTTAGAAGATG+TGG + chr5_2:28528352-28528371 Msa0766620:intron 30.0%
! AAGTTTCCTCGTTTTATATC+AGG - chr5_2:28528415-28528434 None:intergenic 30.0%
! GAACAAGTGAGATATTCTTT+TGG + chr5_2:28528483-28528502 Msa0766620:intron 30.0%
TGATACAATGATACTAACAC+GGG + chr5_2:28528866-28528885 Msa0766620:intron 30.0%
!! TCAAAGAAAGTTGATGCATT+TGG - chr5_2:28529049-28529068 None:intergenic 30.0%
ACTTACACGCAAATTAAAGT+AGG + chr5_2:28529089-28529108 Msa0766620:intron 30.0%
CTTACACGCAAATTAAAGTA+GGG + chr5_2:28529090-28529109 Msa0766620:intron 30.0%
GAACATATAATGTCAGTATC+TGG - chr5_2:28529162-28529181 None:intergenic 30.0%
TGCATAATATATGTAAGGTC+CGG + chr5_2:28529356-28529375 Msa0766620:intron 30.0%
!!! GTCTTAATATTTTTTGGTGG+TGG - chr5_2:28529400-28529419 None:intergenic 30.0%
ATTTCATTATCTGTTCTCCT+TGG - chr5_2:28529552-28529571 None:intergenic 30.0%
CAAGAAAAGACTTATCAGAA+TGG + chr5_2:28529596-28529615 Msa0766620:CDS 30.0%
AGAAAAGACTTATCAGAATG+GGG + chr5_2:28529598-28529617 Msa0766620:CDS 30.0%
GAACTTGATGAAGATAGTAA+AGG - chr5_2:28529768-28529787 None:intergenic 30.0%
ATACATTGCATTGTTGTGTT+TGG - chr5_2:28529808-28529827 None:intergenic 30.0%
ATCATTATTTGCAAGCATGA+TGG - chr5_2:28529841-28529860 None:intergenic 30.0%
GTTTATGTGTCTAAATTGCA+AGG + chr5_2:28530002-28530021 Msa0766620:CDS 30.0%
TTCATAGACTTCAATGGAAA+TGG + chr5_2:28530086-28530105 Msa0766620:CDS 30.0%
! AAGCTTCTTGTCTTCTTTTG+GGG - chr5_2:28528192-28528211 None:intergenic 35.0%
! CTCGTTTTATATCAGGATTC+AGG - chr5_2:28528408-28528427 None:intergenic 35.0%
CTGAATCCTGATATAAAACG+AGG + chr5_2:28528406-28528425 Msa0766620:CDS 35.0%
AGTGCAGTTTCCATGTAAAT+AGG - chr5_2:28528551-28528570 None:intergenic 35.0%
TTATGTGACCTTGTCTCATT+GGG - chr5_2:28528690-28528709 None:intergenic 35.0%
TCGTAACTTCGTATTTGTGT+TGG - chr5_2:28528840-28528859 None:intergenic 35.0%
GCATAATATATGTAAGGTCC+GGG + chr5_2:28529357-28529376 Msa0766620:intron 35.0%
CATAATATATGTAAGGTCCG+GGG + chr5_2:28529358-28529377 Msa0766620:intron 35.0%
!!! TAATATTTTTTGGTGGTGGC+CGG - chr5_2:28529396-28529415 None:intergenic 35.0%
AACAATATGCACTTCACAGA+TGG + chr5_2:28529505-28529524 Msa0766620:intron 35.0%
!!! GTTAGATTTTGGTTTGTGAG+TGG - chr5_2:28529634-28529653 None:intergenic 35.0%
GAAGCAAGATCATCAATGTT+AGG + chr5_2:28529726-28529745 Msa0766620:CDS 35.0%
TTCAACTCATTGGTAAGACA+AGG - chr5_2:28529909-28529928 None:intergenic 35.0%
! CTTACCAATGAGTTGAAGTT+CGG + chr5_2:28529912-28529931 Msa0766620:CDS 35.0%
GACACTTTCATAGACTTCAA+TGG + chr5_2:28530080-28530099 Msa0766620:CDS 35.0%
! AAGCTTCTTGTCTTCTTTTG+GGG - chr5_2:28528192-28528211 None:intergenic 35.0%
! CTCGTTTTATATCAGGATTC+AGG - chr5_2:28528408-28528427 None:intergenic 35.0%
CTGAATCCTGATATAAAACG+AGG + chr5_2:28528406-28528425 Msa0766620:CDS 35.0%
AGTGCAGTTTCCATGTAAAT+AGG - chr5_2:28528551-28528570 None:intergenic 35.0%
TTATGTGACCTTGTCTCATT+GGG - chr5_2:28528690-28528709 None:intergenic 35.0%
TCGTAACTTCGTATTTGTGT+TGG - chr5_2:28528840-28528859 None:intergenic 35.0%
GCATAATATATGTAAGGTCC+GGG + chr5_2:28529357-28529376 Msa0766620:intron 35.0%
CATAATATATGTAAGGTCCG+GGG + chr5_2:28529358-28529377 Msa0766620:intron 35.0%
!!! TAATATTTTTTGGTGGTGGC+CGG - chr5_2:28529396-28529415 None:intergenic 35.0%
AACAATATGCACTTCACAGA+TGG + chr5_2:28529505-28529524 Msa0766620:intron 35.0%
!!! GTTAGATTTTGGTTTGTGAG+TGG - chr5_2:28529634-28529653 None:intergenic 35.0%
GAAGCAAGATCATCAATGTT+AGG + chr5_2:28529726-28529745 Msa0766620:CDS 35.0%
TTCAACTCATTGGTAAGACA+AGG - chr5_2:28529909-28529928 None:intergenic 35.0%
! CTTACCAATGAGTTGAAGTT+CGG + chr5_2:28529912-28529931 Msa0766620:CDS 35.0%
GACACTTTCATAGACTTCAA+TGG + chr5_2:28530080-28530099 Msa0766620:CDS 35.0%
TTGAAAATGAGTAGGGCTCT+AGG + chr5_2:28528146-28528165 Msa0766620:CDS 40.0%
TGAAAATGAGTAGGGCTCTA+GGG + chr5_2:28528147-28528166 Msa0766620:CDS 40.0%
GCAAAGAATGCCAGTTTCTA+TGG - chr5_2:28528238-28528257 None:intergenic 40.0%
ATTCAGCTTCATGCACTTCT+CGG + chr5_2:28528460-28528479 Msa0766620:CDS 40.0%
CTTATGTGACCTTGTCTCAT+TGG - chr5_2:28528691-28528710 None:intergenic 40.0%
CACGCAAATTAAAGTAGGGA+AGG + chr5_2:28529094-28529113 Msa0766620:intron 40.0%
!!! AATATTTTTTGGTGGTGGCC+GGG - chr5_2:28529395-28529414 None:intergenic 40.0%
!!! GATTTTGGTTTGTGAGTGGT+GGG - chr5_2:28529630-28529649 None:intergenic 40.0%
!!! AGATTTTGGTTTGTGAGTGG+TGG - chr5_2:28529631-28529650 None:intergenic 40.0%
CAATACTGCTATCAAACACG+TGG + chr5_2:28529674-28529693 Msa0766620:CDS 40.0%
TATCAAACACGTGGCTCAAT+GGG + chr5_2:28529683-28529702 Msa0766620:CDS 40.0%
GTAAGACAAGGAAGCTCATT+AGG - chr5_2:28529897-28529916 None:intergenic 40.0%
TTCTCCGAACTTCAACTCAT+TGG - chr5_2:28529919-28529938 None:intergenic 40.0%
! AATGAGTTGAAGTTCGGAGA+AGG + chr5_2:28529918-28529937 Msa0766620:CDS 40.0%
! GCAAGGTGATGATGATCTAA+TGG + chr5_2:28530019-28530038 Msa0766620:CDS 40.0%
! AGGTGATGATGATCTAATGG+TGG + chr5_2:28530022-28530041 Msa0766620:CDS 40.0%
TGATGATCTAATGGTGGCAT+TGG + chr5_2:28530028-28530047 Msa0766620:CDS 40.0%
GCATTTGGAGATTCCTTCAA+TGG + chr5_2:28530053-28530072 Msa0766620:CDS 40.0%
!! GAAAGTGTCAGTACCATTGA+AGG - chr5_2:28530069-28530088 None:intergenic 40.0%
!! GTGCAATTTTGATGCTAGCT+TGG + chr5_2:28530112-28530131 Msa0766620:CDS 40.0%
TTGAAAATGAGTAGGGCTCT+AGG + chr5_2:28528146-28528165 Msa0766620:CDS 40.0%
TGAAAATGAGTAGGGCTCTA+GGG + chr5_2:28528147-28528166 Msa0766620:CDS 40.0%
GCAAAGAATGCCAGTTTCTA+TGG - chr5_2:28528238-28528257 None:intergenic 40.0%
ATTCAGCTTCATGCACTTCT+CGG + chr5_2:28528460-28528479 Msa0766620:CDS 40.0%
CTTATGTGACCTTGTCTCAT+TGG - chr5_2:28528691-28528710 None:intergenic 40.0%
CACGCAAATTAAAGTAGGGA+AGG + chr5_2:28529094-28529113 Msa0766620:intron 40.0%
!!! AATATTTTTTGGTGGTGGCC+GGG - chr5_2:28529395-28529414 None:intergenic 40.0%
!!! GATTTTGGTTTGTGAGTGGT+GGG - chr5_2:28529630-28529649 None:intergenic 40.0%
!!! AGATTTTGGTTTGTGAGTGG+TGG - chr5_2:28529631-28529650 None:intergenic 40.0%
CAATACTGCTATCAAACACG+TGG + chr5_2:28529674-28529693 Msa0766620:CDS 40.0%
TATCAAACACGTGGCTCAAT+GGG + chr5_2:28529683-28529702 Msa0766620:CDS 40.0%
GTAAGACAAGGAAGCTCATT+AGG - chr5_2:28529897-28529916 None:intergenic 40.0%
TTCTCCGAACTTCAACTCAT+TGG - chr5_2:28529919-28529938 None:intergenic 40.0%
! AATGAGTTGAAGTTCGGAGA+AGG + chr5_2:28529918-28529937 Msa0766620:CDS 40.0%
! GCAAGGTGATGATGATCTAA+TGG + chr5_2:28530019-28530038 Msa0766620:CDS 40.0%
! AGGTGATGATGATCTAATGG+TGG + chr5_2:28530022-28530041 Msa0766620:CDS 40.0%
TGATGATCTAATGGTGGCAT+TGG + chr5_2:28530028-28530047 Msa0766620:CDS 40.0%
GCATTTGGAGATTCCTTCAA+TGG + chr5_2:28530053-28530072 Msa0766620:CDS 40.0%
!! GAAAGTGTCAGTACCATTGA+AGG - chr5_2:28530069-28530088 None:intergenic 40.0%
!! GTGCAATTTTGATGCTAGCT+TGG + chr5_2:28530112-28530131 Msa0766620:CDS 40.0%
TAGGGTTGAAGAAAGGACCA+TGG + chr5_2:28528165-28528184 Msa0766620:CDS 45.0%
!! TTGTCTTCTTTTGGGGACCA+TGG - chr5_2:28528185-28528204 None:intergenic 45.0%
CTCAACATGGCCATAGAAAC+TGG + chr5_2:28528225-28528244 Msa0766620:CDS 45.0%
! GTAATGTTACCTGCTCTGGA+GGG - chr5_2:28528260-28528279 None:intergenic 45.0%
TGTAATGTTACCTGCTCTGG+AGG - chr5_2:28528261-28528280 None:intergenic 45.0%
TGCTGTAATGTTACCTGCTC+TGG - chr5_2:28528264-28528283 None:intergenic 45.0%
TTCAGCTTCATGCACTTCTC+GGG + chr5_2:28528461-28528480 Msa0766620:CDS 45.0%
ACCTTGTCTCATTGGGAGTA+GGG - chr5_2:28528683-28528702 None:intergenic 45.0%
!! CATCTATTGGTTTGTGTCGC+AGG + chr5_2:28528937-28528956 Msa0766620:intron 45.0%
! TGAGTTCAGCTCAGTTGGTA+TGG + chr5_2:28529329-28529348 Msa0766620:intron 45.0%
!!! ATATTTTTTGGTGGTGGCCG+GGG - chr5_2:28529394-28529413 None:intergenic 45.0%
CATTATCTGTTCTCCTTGGC+AGG - chr5_2:28529548-28529567 None:intergenic 45.0%
CTATCAAACACGTGGCTCAA+TGG + chr5_2:28529682-28529701 Msa0766620:CDS 45.0%
CTCATTAGGACAGCTCAATG+TGG - chr5_2:28529883-28529902 None:intergenic 45.0%
TTGAAGTTCGGAGAAGGCTT+AGG + chr5_2:28529924-28529943 Msa0766620:CDS 45.0%
! ATGGTGGCATTGGATGCATT+TGG + chr5_2:28530038-28530057 Msa0766620:CDS 45.0%
TAGGGTTGAAGAAAGGACCA+TGG + chr5_2:28528165-28528184 Msa0766620:CDS 45.0%
!! TTGTCTTCTTTTGGGGACCA+TGG - chr5_2:28528185-28528204 None:intergenic 45.0%
CTCAACATGGCCATAGAAAC+TGG + chr5_2:28528225-28528244 Msa0766620:CDS 45.0%
! GTAATGTTACCTGCTCTGGA+GGG - chr5_2:28528260-28528279 None:intergenic 45.0%
TGTAATGTTACCTGCTCTGG+AGG - chr5_2:28528261-28528280 None:intergenic 45.0%
TGCTGTAATGTTACCTGCTC+TGG - chr5_2:28528264-28528283 None:intergenic 45.0%
TTCAGCTTCATGCACTTCTC+GGG + chr5_2:28528461-28528480 Msa0766620:CDS 45.0%
ACCTTGTCTCATTGGGAGTA+GGG - chr5_2:28528683-28528702 None:intergenic 45.0%
!! CATCTATTGGTTTGTGTCGC+AGG + chr5_2:28528937-28528956 Msa0766620:intron 45.0%
! TGAGTTCAGCTCAGTTGGTA+TGG + chr5_2:28529329-28529348 Msa0766620:intron 45.0%
!!! ATATTTTTTGGTGGTGGCCG+GGG - chr5_2:28529394-28529413 None:intergenic 45.0%
CATTATCTGTTCTCCTTGGC+AGG - chr5_2:28529548-28529567 None:intergenic 45.0%
CTATCAAACACGTGGCTCAA+TGG + chr5_2:28529682-28529701 Msa0766620:CDS 45.0%
CTCATTAGGACAGCTCAATG+TGG - chr5_2:28529883-28529902 None:intergenic 45.0%
TTGAAGTTCGGAGAAGGCTT+AGG + chr5_2:28529924-28529943 Msa0766620:CDS 45.0%
! ATGGTGGCATTGGATGCATT+TGG + chr5_2:28530038-28530057 Msa0766620:CDS 45.0%
!! AGGGCTCTAGGGTTGAAGAA+AGG + chr5_2:28528158-28528177 Msa0766620:CDS 50.0%
GTGGAAAGAGTTGCAGACTG+AGG + chr5_2:28528371-28528390 Msa0766620:CDS 50.0%
GAAAGAGTTGCAGACTGAGG+TGG + chr5_2:28528374-28528393 Msa0766620:CDS 50.0%
ACGAGGAAACTTCAGCTCAG+AGG + chr5_2:28528423-28528442 Msa0766620:CDS 50.0%
ACCCTACTCCCAATGAGACA+AGG + chr5_2:28528679-28528698 Msa0766620:intron 50.0%
GACCTTGTCTCATTGGGAGT+AGG - chr5_2:28528684-28528703 None:intergenic 50.0%
CCAACTGAGCTGAACTCACA+AGG - chr5_2:28529327-28529346 None:intergenic 50.0%
CCTTGTGAGTTCAGCTCAGT+TGG + chr5_2:28529324-28529343 Msa0766620:intron 50.0%
!! AGGGCTCTAGGGTTGAAGAA+AGG + chr5_2:28528158-28528177 Msa0766620:CDS 50.0%
GTGGAAAGAGTTGCAGACTG+AGG + chr5_2:28528371-28528390 Msa0766620:CDS 50.0%
GAAAGAGTTGCAGACTGAGG+TGG + chr5_2:28528374-28528393 Msa0766620:CDS 50.0%
ACGAGGAAACTTCAGCTCAG+AGG + chr5_2:28528423-28528442 Msa0766620:CDS 50.0%
ACCCTACTCCCAATGAGACA+AGG + chr5_2:28528679-28528698 Msa0766620:intron 50.0%
GACCTTGTCTCATTGGGAGT+AGG - chr5_2:28528684-28528703 None:intergenic 50.0%
CCAACTGAGCTGAACTCACA+AGG - chr5_2:28529327-28529346 None:intergenic 50.0%
CCTTGTGAGTTCAGCTCAGT+TGG + chr5_2:28529324-28529343 Msa0766620:intron 50.0%
CATTCTTTGCCCTCCAGAGC+AGG + chr5_2:28528248-28528267 Msa0766620:CDS 55.0%
TCCGGGGTTCAAATCAACCC+CGG + chr5_2:28529374-28529393 Msa0766620:intron 55.0%
TGGCAGGAGAGCTGCTATTG+TGG - chr5_2:28529532-28529551 None:intergenic 55.0%
CAATAGCAGCTCTCCTGCCA+AGG + chr5_2:28529532-28529551 Msa0766620:CDS 55.0%
CATTCTTTGCCCTCCAGAGC+AGG + chr5_2:28528248-28528267 Msa0766620:CDS 55.0%
TCCGGGGTTCAAATCAACCC+CGG + chr5_2:28529374-28529393 Msa0766620:intron 55.0%
TGGCAGGAGAGCTGCTATTG+TGG - chr5_2:28529532-28529551 None:intergenic 55.0%
CAATAGCAGCTCTCCTGCCA+AGG + chr5_2:28529532-28529551 Msa0766620:CDS 55.0%
!! GCCGGGGTTGATTTGAACCC+CGG - chr5_2:28529378-28529397 None:intergenic 60.0%
!! GCCGGGGTTGATTTGAACCC+CGG - chr5_2:28529378-28529397 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 28528140 28530148 28528140 ID=Msa0766620;Name=Msa0766620
chr5_2 mRNA 28528140 28530148 28528140 ID=Msa0766620-mRNA-1;Parent=Msa0766620;Name=Msa0766620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|294
chr5_2 exon 28528140 28528269 28528140 ID=Msa0766620-mRNA-1:exon:10982;Parent=Msa0766620-mRNA-1
chr5_2 exon 28528359 28528488 28528359 ID=Msa0766620-mRNA-1:exon:10983;Parent=Msa0766620-mRNA-1
chr5_2 exon 28529524 28530148 28529524 ID=Msa0766620-mRNA-1:exon:10984;Parent=Msa0766620-mRNA-1
chr5_2 CDS 28528140 28528269 28528140 ID=Msa0766620-mRNA-1:cds;Parent=Msa0766620-mRNA-1
chr5_2 CDS 28528359 28528488 28528359 ID=Msa0766620-mRNA-1:cds;Parent=Msa0766620-mRNA-1
chr5_2 CDS 28529524 28530148 28529524 ID=Msa0766620-mRNA-1:cds;Parent=Msa0766620-mRNA-1
Gene Sequence

>Msa0766620

TGTGATTTGAAAATGAGTAGGGCTCTAGGGTTGAAGAAAGGACCATGGTCCCCAAAAGAAGACAAGAAGCTTATAGCATATGTTACTCAACATGGCCATAGAAACTGGCATTCTTTGCCCTCCAGAGCAGGTCTTAGAAGATGTGGAAAGAGTTGCAGACTGAGGTGGATTAACTACCTGAATCCTGATATAAAACGAGGAAACTTCAGCTCAGAGGAAGATCACACTATTATTCAGCTTCATGCACTTCTCGGGAACAAATGGTCCACAATAGCAGCTCTCCTGCCAAGGAGAACAGATAATGAAATAAAGAATCATTGGAACAGTAACATCAAGAAAAGACTTATCAGAATGGGGATAGATCCCACCACTCACAAACCAAAATCTAACAACAACAACAAGGACAATGTCAATACTGCTATCAAACACGTGGCTCAATGGGAGAATGTTAGATTAGAAGCTGAAGCAAGATCATCAATGTTAGGAAAAACTCAAACTCAACCTTTACTATCTTCATCAAGTTCATCAAAGTTATCACTAACCAAACACAACAATGCAATGTATAACTTGTGTGCCATCATGCTTGCAAATAATGATGACTCTTTTTCTTCAACATCCACATTGAGCTGTCCTAATGAGCTTCCTTGTCTTACCAATGAGTTGAAGTTCGGAGAAGGCTTAGGATCATATGAGAGTGTTAGTAATAATAATATCATGGAAACTATTGCTCAAGATGATGTTTATGTGTCTAAATTGCAAGGTGATGATGATCTAATGGTGGCATTGGATGCATTTGGAGATTCCTTCAATGGTACTGACACTTTCATAGACTTCAATGGAAATGGAATGTGCAATTTTGATGCTAGCTTGGCATTTTTTGAGTAA
Protein sequence

>Msa0766620

CDLKMSRALGLKKGPWSPKEDKKLIAYVTQHGHRNWHSLPSRAGLRRCGKSCRLRWINYLNPDIKRGNFSSEEDHTIIQLHALLGNKWSTIAALLPRRTDNEIKNHWNSNIKKRLIRMGIDPTTHKPKSNNNNKDNVNTAIKHVAQWENVRLEAEARSSMLGKTQTQPLLSSSSSSKLSLTKHNNAMYNLCAIMLANNDDSFSSTSTLSCPNELPCLTNELKFGEGLGSYESVSNNNIMETIAQDDVYVSKLQGDDDLMVALDAFGDSFNGTDTFIDFNGNGMCNFDASLAFFE*