Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767380 | sp|Q8L3W1|VRN1_ARATH | 28.280 | 343 | 185 | 9 | 16 | 306 | 6 | 339 | 1.89e-32 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767380 | G7JXZ7 | 90.303 | 330 | 32 | 0 | 1 | 330 | 1 | 330 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0767380 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767380 | MtrunA17_Chr5g0419201 | 87.571 | 177 | 22 | 0 | 1 | 177 | 1 | 177 | 7.12e-113 | 325 |
| Msa0767380 | MtrunA17_Chr5g0419211 | 89.130 | 92 | 10 | 0 | 223 | 314 | 10 | 101 | 1.16e-53 | 171 |
| Msa0767380 | MtrunA17_Chr3g0131891 | 33.007 | 306 | 180 | 9 | 16 | 310 | 19 | 310 | 8.79e-45 | 155 |
| Msa0767380 | MtrunA17_Chr8g0390841 | 28.657 | 335 | 187 | 8 | 2 | 309 | 28 | 337 | 5.56e-43 | 155 |
| Msa0767380 | MtrunA17_Chr7g0233561 | 32.039 | 309 | 181 | 10 | 16 | 306 | 18 | 315 | 1.05e-42 | 150 |
| Msa0767380 | MtrunA17_Chr1g0208771 | 30.159 | 315 | 170 | 8 | 32 | 318 | 13 | 305 | 6.70e-41 | 148 |
| Msa0767380 | MtrunA17_Chr7g0233541 | 30.303 | 297 | 180 | 6 | 31 | 310 | 1 | 287 | 6.77e-40 | 142 |
| Msa0767380 | MtrunA17_Chr1g0163261 | 30.189 | 318 | 189 | 7 | 10 | 317 | 3 | 297 | 3.31e-39 | 140 |
| Msa0767380 | MtrunA17_Chr7g0233531 | 32.753 | 287 | 169 | 7 | 31 | 310 | 1 | 270 | 9.96e-39 | 138 |
| Msa0767380 | MtrunA17_Chr1g0163181 | 31.034 | 290 | 187 | 5 | 25 | 307 | 14 | 297 | 2.54e-38 | 141 |
| Msa0767380 | MtrunA17_Chr1g0163251 | 32.765 | 293 | 159 | 9 | 25 | 304 | 14 | 281 | 7.47e-38 | 139 |
| Msa0767380 | MtrunA17_Chr7g0233521 | 30.662 | 287 | 175 | 9 | 31 | 310 | 1 | 270 | 4.13e-36 | 131 |
| Msa0767380 | MtrunA17_Chr4g0067431 | 29.464 | 336 | 202 | 11 | 1 | 314 | 1 | 323 | 1.59e-35 | 131 |
| Msa0767380 | MtrunA17_Chr1g0163221 | 30.195 | 308 | 190 | 10 | 16 | 314 | 11 | 302 | 1.39e-33 | 127 |
| Msa0767380 | MtrunA17_Chr3g0103181 | 28.322 | 286 | 186 | 5 | 16 | 301 | 12 | 278 | 2.74e-33 | 124 |
| Msa0767380 | MtrunA17_Chr7g0233571 | 35.484 | 217 | 118 | 5 | 16 | 220 | 10 | 216 | 4.38e-33 | 122 |
| Msa0767380 | MtrunA17_Chr3g0103191 | 29.572 | 257 | 161 | 8 | 16 | 269 | 12 | 251 | 6.37e-33 | 122 |
| Msa0767380 | MtrunA17_Chr1g0163201 | 28.621 | 290 | 174 | 5 | 32 | 307 | 19 | 289 | 9.94e-33 | 125 |
| Msa0767380 | MtrunA17_Chr1g0163231 | 30.693 | 303 | 177 | 7 | 10 | 304 | 3 | 280 | 1.44e-32 | 122 |
| Msa0767380 | MtrunA17_Chr1g0163071 | 30.094 | 319 | 175 | 11 | 31 | 319 | 1 | 301 | 1.98e-32 | 122 |
| Msa0767380 | MtrunA17_Chr3g0103171 | 29.391 | 279 | 168 | 6 | 32 | 301 | 6 | 264 | 3.23e-32 | 120 |
| Msa0767380 | MtrunA17_Chr1g0171611 | 29.900 | 301 | 170 | 11 | 10 | 304 | 3 | 268 | 8.30e-30 | 115 |
| Msa0767380 | MtrunA17_Chr3g0077411 | 29.333 | 300 | 162 | 8 | 16 | 306 | 262 | 520 | 1.12e-28 | 115 |
| Msa0767380 | MtrunA17_Chr3g0077411 | 32.639 | 144 | 94 | 3 | 2 | 144 | 12 | 153 | 1.18e-17 | 83.6 |
| Msa0767380 | MtrunA17_Chr1g0163131 | 29.934 | 304 | 181 | 12 | 16 | 302 | 18 | 306 | 9.75e-27 | 107 |
| Msa0767380 | MtrunA17_Chr3g0103151 | 35.032 | 157 | 84 | 4 | 16 | 165 | 12 | 157 | 4.36e-25 | 99.0 |
| Msa0767380 | MtrunA17_Chr3g0077451 | 26.523 | 279 | 152 | 8 | 30 | 306 | 10 | 237 | 6.44e-25 | 100 |
| Msa0767380 | MtrunA17_Chr1g0163101 | 41.045 | 134 | 73 | 4 | 16 | 149 | 17 | 144 | 2.40e-24 | 97.8 |
| Msa0767380 | MtrunA17_Chr5g0429931 | 25.632 | 277 | 162 | 7 | 32 | 306 | 11 | 245 | 1.97e-22 | 94.4 |
| Msa0767380 | MtrunA17_Chr3g0103201 | 26.754 | 228 | 155 | 4 | 74 | 301 | 4 | 219 | 9.82e-22 | 91.7 |
| Msa0767380 | MtrunA17_Chr1g0154161 | 25.342 | 292 | 190 | 9 | 27 | 309 | 41 | 313 | 1.09e-21 | 94.0 |
| Msa0767380 | MtrunA17_Chr1g0162441 | 32.222 | 180 | 109 | 3 | 16 | 195 | 7 | 173 | 1.39e-21 | 94.7 |
| Msa0767380 | MtrunA17_Chr1g0162441 | 29.054 | 148 | 87 | 5 | 178 | 310 | 255 | 399 | 4.08e-11 | 63.5 |
| Msa0767380 | MtrunA17_Chr3g0077461 | 34.815 | 135 | 87 | 1 | 9 | 143 | 230 | 363 | 2.75e-21 | 94.4 |
| Msa0767380 | MtrunA17_Chr3g0077461 | 33.010 | 103 | 68 | 1 | 32 | 134 | 23 | 124 | 2.67e-15 | 76.6 |
| Msa0767380 | MtrunA17_Chr1g0154131 | 24.055 | 291 | 200 | 7 | 27 | 306 | 193 | 473 | 7.42e-21 | 92.8 |
| Msa0767380 | MtrunA17_Chr1g0163121 | 41.667 | 120 | 63 | 4 | 27 | 146 | 6 | 118 | 5.40e-20 | 85.1 |
| Msa0767380 | MtrunA17_Chr6g0476181 | 37.681 | 138 | 72 | 4 | 31 | 168 | 1 | 124 | 2.40e-19 | 83.6 |
| Msa0767380 | MtrunA17_Chr4g0033961 | 33.793 | 145 | 95 | 1 | 13 | 157 | 3 | 146 | 3.04e-19 | 87.8 |
| Msa0767380 | MtrunA17_Chr6g0467351 | 33.529 | 170 | 94 | 5 | 1 | 167 | 1 | 154 | 6.31e-19 | 84.3 |
| Msa0767380 | MtrunA17_Chr1g0162411 | 39.796 | 98 | 59 | 0 | 16 | 113 | 7 | 104 | 8.00e-19 | 87.0 |
| Msa0767380 | MtrunA17_Chr1g0163141 | 37.500 | 136 | 78 | 4 | 28 | 163 | 7 | 135 | 2.82e-18 | 81.3 |
| Msa0767380 | MtrunA17_Chr1g0163241 | 33.088 | 136 | 77 | 3 | 6 | 141 | 5 | 126 | 4.16e-18 | 80.5 |
| Msa0767380 | MtrunA17_Chr1g0163191 | 35.652 | 115 | 68 | 2 | 24 | 138 | 13 | 121 | 5.06e-18 | 80.1 |
| Msa0767380 | MtrunA17_Chr1g0154111 | 23.077 | 325 | 199 | 7 | 27 | 302 | 37 | 359 | 5.27e-18 | 84.7 |
| Msa0767380 | MtrunA17_Chr1g0162161 | 39.496 | 119 | 65 | 4 | 31 | 149 | 3 | 114 | 5.88e-18 | 79.7 |
| Msa0767380 | MtrunA17_Chr1g0163081 | 39.450 | 109 | 62 | 3 | 31 | 139 | 5 | 109 | 7.93e-18 | 79.0 |
| Msa0767380 | MtrunA17_Chr3g0077361 | 32.812 | 128 | 84 | 2 | 13 | 139 | 37 | 163 | 1.06e-16 | 80.9 |
| Msa0767380 | MtrunA17_Chr1g0163061 | 38.000 | 100 | 61 | 1 | 16 | 114 | 15 | 114 | 1.42e-16 | 78.6 |
| Msa0767380 | MtrunA17_Chr1g0162151 | 40.659 | 91 | 53 | 1 | 224 | 314 | 41 | 130 | 1.78e-16 | 77.0 |
| Msa0767380 | MtrunA17_Chr4g0009491 | 24.889 | 225 | 130 | 5 | 9 | 233 | 218 | 403 | 6.07e-16 | 78.2 |
| Msa0767380 | MtrunA17_Chr4g0009491 | 24.904 | 261 | 122 | 8 | 30 | 284 | 11 | 203 | 7.61e-15 | 75.1 |
| Msa0767380 | MtrunA17_Chr3g0077381 | 37.647 | 85 | 53 | 0 | 30 | 114 | 34 | 118 | 3.04e-15 | 76.3 |
| Msa0767380 | MtrunA17_Chr3g0077381 | 33.333 | 108 | 71 | 1 | 20 | 127 | 251 | 357 | 2.94e-14 | 73.2 |
| Msa0767380 | MtrunA17_Chr1g0163091 | 36.283 | 113 | 69 | 2 | 204 | 314 | 19 | 130 | 6.35e-15 | 71.6 |
| Msa0767380 | MtrunA17_Chr1g0163161 | 41.748 | 103 | 54 | 4 | 44 | 146 | 1 | 97 | 6.39e-15 | 70.9 |
| Msa0767380 | MtrunA17_Chr3g0077421 | 23.482 | 247 | 133 | 7 | 64 | 306 | 5 | 199 | 1.48e-14 | 71.6 |
| Msa0767380 | MtrunA17_Chr3g0077441 | 23.482 | 247 | 133 | 7 | 64 | 306 | 5 | 199 | 1.48e-14 | 71.6 |
| Msa0767380 | MtrunA17_Chr1g0163111 | 32.787 | 122 | 76 | 3 | 205 | 324 | 12 | 129 | 7.88e-14 | 70.1 |
| Msa0767380 | MtrunA17_Chr1g0154151 | 26.246 | 301 | 182 | 10 | 32 | 301 | 20 | 311 | 1.15e-13 | 70.9 |
| Msa0767380 | MtrunA17_Chr6g0476171 | 31.655 | 139 | 91 | 3 | 185 | 319 | 13 | 151 | 3.28e-13 | 68.6 |
| Msa0767380 | MtrunA17_Chr1g0154101 | 27.807 | 187 | 109 | 5 | 27 | 208 | 193 | 358 | 4.92e-13 | 70.1 |
| Msa0767380 | MtrunA17_Chr1g0154101 | 34.444 | 90 | 59 | 0 | 16 | 105 | 25 | 114 | 1.11e-11 | 65.9 |
| Msa0767380 | MtrunA17_Chr1g0154211 | 35.556 | 90 | 58 | 0 | 17 | 106 | 23 | 112 | 8.17e-13 | 68.6 |
| Msa0767380 | MtrunA17_Chr1g0154171 | 34.568 | 81 | 53 | 0 | 27 | 107 | 33 | 113 | 9.80e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767380 | AT3G18990.2 | 28.571 | 343 | 184 | 9 | 16 | 306 | 6 | 339 | 8.36e-34 | 128 |
| Msa0767380 | AT3G18990.1 | 28.280 | 343 | 185 | 9 | 16 | 306 | 6 | 339 | 1.92e-33 | 126 |
| Msa0767380 | AT4G01580.1 | 38.095 | 147 | 75 | 4 | 16 | 161 | 30 | 161 | 1.01e-19 | 85.9 |
| Msa0767380 | AT3G18960.2 | 41.414 | 99 | 58 | 0 | 16 | 114 | 30 | 128 | 9.99e-18 | 80.5 |
| Msa0767380 | AT3G18960.1 | 41.414 | 99 | 58 | 0 | 16 | 114 | 30 | 128 | 1.32e-17 | 80.5 |
| Msa0767380 | AT4G33280.1 | 22.945 | 292 | 204 | 7 | 30 | 306 | 37 | 322 | 5.22e-17 | 80.9 |
| Msa0767380 | AT1G49475.1 | 32.903 | 155 | 93 | 3 | 16 | 165 | 34 | 182 | 6.18e-16 | 75.5 |
| Msa0767380 | AT3G18960.3 | 42.169 | 83 | 48 | 0 | 32 | 114 | 9 | 91 | 1.32e-13 | 68.6 |
| Msa0767380 | AT1G49480.3 | 30.061 | 163 | 97 | 7 | 153 | 306 | 70 | 224 | 1.26e-12 | 67.0 |
| Msa0767380 | AT1G49480.1 | 30.061 | 163 | 97 | 7 | 153 | 306 | 70 | 224 | 1.26e-12 | 67.0 |
| Msa0767380 | AT1G49480.2 | 30.061 | 163 | 97 | 7 | 153 | 306 | 70 | 224 | 1.26e-12 | 67.0 |
Find 55 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACCAAATGGTGATAAA+TGG | 0.158299 | 5_2:-30432795 | Msa0767380:CDS |
| AGCATTGAACTTGAAGTTTA+AGG | 0.206027 | 5_2:+30431782 | None:intergenic |
| CTTTCCATTCAAATACTCTT+TGG | 0.236141 | 5_2:+30431851 | None:intergenic |
| GTGATAAATGGGAAGTAAAT+TGG | 0.244779 | 5_2:-30432783 | Msa0767380:CDS |
| GCGCTTTGGAAATGGATTAT+TGG | 0.263628 | 5_2:-30432624 | Msa0767380:CDS |
| AGACGATTATATTGAGATTT+CGG | 0.264534 | 5_2:-30432527 | Msa0767380:CDS |
| ATGCAACGGACGAATGAAAA+AGG | 0.295165 | 5_2:+30432168 | None:intergenic |
| TTTGGTAGAACTAGGGTTAC+TGG | 0.318076 | 5_2:+30432808 | None:intergenic |
| AAACACTACAAAATACTAAA+AGG | 0.340468 | 5_2:-30432219 | Msa0767380:CDS |
| CATGACGTTGTGTTTCAAAA+TGG | 0.346624 | 5_2:-30432748 | Msa0767380:CDS |
| TTTCTTTCAACTTGATCTCT+AGG | 0.366619 | 5_2:+30432589 | None:intergenic |
| CATCAAATGAAGCTATGAAT+TGG | 0.370847 | 5_2:-30432246 | Msa0767380:CDS |
| TCAACTTGATCTCTAGGGCT+TGG | 0.372702 | 5_2:+30432595 | None:intergenic |
| GATATTTGACAAAAGCGCTT+TGG | 0.378554 | 5_2:-30432638 | Msa0767380:CDS |
| CAACACTATTCAATGAGTTA+TGG | 0.379815 | 5_2:-30432709 | Msa0767380:CDS |
| TTTACAATTTCAGGAGGTAA+TGG | 0.380537 | 5_2:-30432298 | Msa0767380:intron |
| TGACAAAAGCGCTTTGGAAA+TGG | 0.381408 | 5_2:-30432632 | Msa0767380:CDS |
| AACACTATTCAATGAGTTAT+GGG | 0.394195 | 5_2:-30432708 | Msa0767380:CDS |
| GAGGAATATAATTTCAAAGT+TGG | 0.395164 | 5_2:-30431714 | Msa0767380:CDS |
| TCTAGCTCCGCACACTTTCA+AGG | 0.409078 | 5_2:-30431615 | Msa0767380:intron |
| TCCATCCTACCTTGAACATA+TGG | 0.422875 | 5_2:-30432146 | Msa0767380:intron |
| ACTTCCCATTTATCACCATT+TGG | 0.427050 | 5_2:+30432790 | None:intergenic |
| GGGATTGCAACCGTGGTGTT+TGG | 0.435175 | 5_2:-30431825 | Msa0767380:CDS |
| AGTTATGAGTGCTCGATTAG+TGG | 0.441965 | 5_2:+30431758 | None:intergenic |
| TCTACCAAATGGTGATAAAT+GGG | 0.445463 | 5_2:-30432794 | Msa0767380:CDS |
| TTCTTTCAACTTGATCTCTA+GGG | 0.452245 | 5_2:+30432590 | None:intergenic |
| GAGTATTTGAATGGAAAGGA+TGG | 0.463140 | 5_2:-30431846 | Msa0767380:CDS |
| AATCGAGCACTCATAACTTC+TGG | 0.465532 | 5_2:-30431753 | Msa0767380:CDS |
| CGTTGTGTTTCAAAATGGTT+GGG | 0.465755 | 5_2:-30432743 | Msa0767380:CDS |
| CAATGTAACAGATGATTCCT+AGG | 0.470035 | 5_2:-30432867 | Msa0767380:intron |
| TATCACCATTTGGTAGAACT+AGG | 0.471668 | 5_2:+30432800 | None:intergenic |
| GTTATCGGAATGAAAATTCA+TGG | 0.486333 | 5_2:+30432192 | None:intergenic |
| TATTTCTTCACAAAACTCCT+AGG | 0.496072 | 5_2:+30432850 | None:intergenic |
| CAAAGAGTATTTGAATGGAA+AGG | 0.500378 | 5_2:-30431850 | Msa0767380:CDS |
| TACTCTTTGGAAAACGATGT+TGG | 0.517680 | 5_2:+30431864 | None:intergenic |
| TTGGTAGAACTAGGGTTACT+GGG | 0.523068 | 5_2:+30432809 | None:intergenic |
| ATCACCATTTGGTAGAACTA+GGG | 0.529841 | 5_2:+30432801 | None:intergenic |
| ACCATATGTTCAAGGTAGGA+TGG | 0.542632 | 5_2:+30432145 | None:intergenic |
| GTAACCCTAGTTCTACCAAA+TGG | 0.543476 | 5_2:-30432805 | Msa0767380:CDS |
| ATATAGATACCATATGTTCA+AGG | 0.544245 | 5_2:+30432137 | None:intergenic |
| AGTATTTGAATGGAAAGGAT+GGG | 0.554047 | 5_2:-30431845 | Msa0767380:CDS |
| ACGTTGTGTTTCAAAATGGT+TGG | 0.559115 | 5_2:-30432744 | Msa0767380:CDS |
| AACCGTGGTGTTTGGTGATG+AGG | 0.573245 | 5_2:-30431817 | Msa0767380:CDS |
| TTTAATACCTTGAAAGTGTG+CGG | 0.582371 | 5_2:+30431608 | None:intergenic |
| GAGCACTCATAACTTCTGGT+TGG | 0.583650 | 5_2:-30431749 | Msa0767380:CDS |
| CTGGAAATCCTAAAATGAAG+AGG | 0.585261 | 5_2:-30431342 | Msa0767380:CDS |
| AAAAGAATGAAAATCAGTGA+TGG | 0.600241 | 5_2:-30432463 | Msa0767380:intron |
| TGCGGAGCTAGATTGATCAC+TGG | 0.603576 | 5_2:+30431626 | None:intergenic |
| TGGTTGGAGACAAATTGTTG+AGG | 0.606845 | 5_2:-30431733 | Msa0767380:CDS |
| AGATACCATATGTTCAAGGT+AGG | 0.608884 | 5_2:+30432141 | None:intergenic |
| TGGAACTGATGAACAACACT+CGG | 0.613370 | 5_2:+30433086 | None:intergenic |
| TCAAGGTAGGATGGATGCAA+CGG | 0.653476 | 5_2:+30432154 | None:intergenic |
| AAAGGATGGGATTGCAACCG+TGG | 0.682554 | 5_2:-30431832 | Msa0767380:CDS |
| ATCCTCATCACCAAACACCA+CGG | 0.689007 | 5_2:+30431815 | None:intergenic |
| TTGGTGATGAGGATAAGACT+TGG | 0.724527 | 5_2:-30431806 | Msa0767380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAGAAAACTAAATAAA+AGG | + | chr5_2:30431426-30431445 | None:intergenic | 15.0% |
| !!! | GTTTTCTACTTTAATATTTT+TGG | - | chr5_2:30431434-30431453 | Msa0767380:intron | 15.0% |
| !!! | AGTATTTTATTTACAATTTC+AGG | - | chr5_2:30432106-30432125 | Msa0767380:intron | 15.0% |
| !! | GTTAATTAAACTAAAAAGAA+TGG | + | chr5_2:30432390-30432409 | None:intergenic | 15.0% |
| !! | TTAACGAATTTATTTACTTT+CGG | - | chr5_2:30432405-30432424 | Msa0767380:intron | 15.0% |
| !! | AAGAAAAAATATCAAGATTT+AGG | + | chr5_2:30432499-30432518 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTTATATGCAAA+TGG | - | chr5_2:30432878-30432897 | Msa0767380:intron | 15.0% |
| !! | AAAGTAGAAAACTAAATAAA+AGG | + | chr5_2:30431426-30431445 | None:intergenic | 15.0% |
| !!! | GTTTTCTACTTTAATATTTT+TGG | - | chr5_2:30431434-30431453 | Msa0767380:intron | 15.0% |
| !!! | AGTATTTTATTTACAATTTC+AGG | - | chr5_2:30432106-30432125 | Msa0767380:intron | 15.0% |
| !! | GTTAATTAAACTAAAAAGAA+TGG | + | chr5_2:30432390-30432409 | None:intergenic | 15.0% |
| !! | TTAACGAATTTATTTACTTT+CGG | - | chr5_2:30432405-30432424 | Msa0767380:intron | 15.0% |
| !! | AAGAAAAAATATCAAGATTT+AGG | + | chr5_2:30432499-30432518 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTTATATGCAAA+TGG | - | chr5_2:30432878-30432897 | Msa0767380:intron | 15.0% |
| !!! | TACAATCTCTTTCTTTTTAA+GGG | + | chr5_2:30431391-30431410 | None:intergenic | 20.0% |
| !!! | TTACAATCTCTTTCTTTTTA+AGG | + | chr5_2:30431392-30431411 | None:intergenic | 20.0% |
| !! | TATGAATGTGTCTAAATAAA+AGG | + | chr5_2:30431466-30431485 | None:intergenic | 20.0% |
| !!! | CATTAATTTTTTCCTTCTTT+AGG | + | chr5_2:30431994-30432013 | None:intergenic | 20.0% |
| !! | AAAGAAGGAAAAAATTAATG+TGG | - | chr5_2:30431994-30432013 | Msa0767380:intron | 20.0% |
| !! | AATGTGGATAAAAAAATCAA+AGG | - | chr5_2:30432010-30432029 | Msa0767380:intron | 20.0% |
| !! | GTATCAATTTAACATTATGA+TGG | + | chr5_2:30432074-30432093 | None:intergenic | 20.0% |
| !!! | ATTTTATTTACAATTTCAGG+AGG | - | chr5_2:30432109-30432128 | Msa0767380:intron | 20.0% |
| !! | AAACACTACAAAATACTAAA+AGG | - | chr5_2:30432194-30432213 | Msa0767380:CDS | 20.0% |
| !! | TTAAACTAGATAGTAAAATG+TGG | + | chr5_2:30432327-30432346 | None:intergenic | 20.0% |
| !! | TCTTGTGTTTAAATGATAAT+TGG | - | chr5_2:30432515-30432534 | Msa0767380:CDS | 20.0% |
| !!! | AACAATATTGAGTTTTTCTT+TGG | - | chr5_2:30432975-30432994 | Msa0767380:intron | 20.0% |
| !!! | TACAATCTCTTTCTTTTTAA+GGG | + | chr5_2:30431391-30431410 | None:intergenic | 20.0% |
| !!! | TTACAATCTCTTTCTTTTTA+AGG | + | chr5_2:30431392-30431411 | None:intergenic | 20.0% |
| !! | TATGAATGTGTCTAAATAAA+AGG | + | chr5_2:30431466-30431485 | None:intergenic | 20.0% |
| !!! | CATTAATTTTTTCCTTCTTT+AGG | + | chr5_2:30431994-30432013 | None:intergenic | 20.0% |
| !! | AAAGAAGGAAAAAATTAATG+TGG | - | chr5_2:30431994-30432013 | Msa0767380:intron | 20.0% |
| !! | AATGTGGATAAAAAAATCAA+AGG | - | chr5_2:30432010-30432029 | Msa0767380:intron | 20.0% |
| !! | GTATCAATTTAACATTATGA+TGG | + | chr5_2:30432074-30432093 | None:intergenic | 20.0% |
| !!! | ATTTTATTTACAATTTCAGG+AGG | - | chr5_2:30432109-30432128 | Msa0767380:intron | 20.0% |
| !! | AAACACTACAAAATACTAAA+AGG | - | chr5_2:30432194-30432213 | Msa0767380:CDS | 20.0% |
| !! | TTAAACTAGATAGTAAAATG+TGG | + | chr5_2:30432327-30432346 | None:intergenic | 20.0% |
| !! | TCTTGTGTTTAAATGATAAT+TGG | - | chr5_2:30432515-30432534 | Msa0767380:CDS | 20.0% |
| !!! | AACAATATTGAGTTTTTCTT+TGG | - | chr5_2:30432975-30432994 | Msa0767380:intron | 20.0% |
| ! | TGAAAAAACATTGTGACTTA+TGG | + | chr5_2:30431350-30431369 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTAGTGCAATTGT+TGG | - | chr5_2:30431488-30431507 | Msa0767380:intron | 25.0% |
| ! | AACACTATTCAATGAGTTAT+GGG | - | chr5_2:30431705-30431724 | Msa0767380:CDS | 25.0% |
| !!! | TAGTTTTTAGACTTGAAACA+AGG | - | chr5_2:30431735-30431754 | Msa0767380:CDS | 25.0% |
| ! | AGACGATTATATTGAGATTT+CGG | - | chr5_2:30431886-30431905 | Msa0767380:intron | 25.0% |
| ! | AAAAGAATGAAAATCAGTGA+TGG | - | chr5_2:30431950-30431969 | Msa0767380:intron | 25.0% |
| ! | GAGGAGAATAATTAAAATGA+AGG | + | chr5_2:30432052-30432071 | None:intergenic | 25.0% |
| ! | TCAATTTAACATTATGATGG+AGG | + | chr5_2:30432071-30432090 | None:intergenic | 25.0% |
| ! | ATATAGATACCATATGTTCA+AGG | + | chr5_2:30432279-30432298 | None:intergenic | 25.0% |
| !! | ATGTGGAAATTGATTCTAAA+AGG | + | chr5_2:30432310-30432329 | None:intergenic | 25.0% |
| ! | TTAAACTAAAAAGAATGGCA+AGG | + | chr5_2:30432385-30432404 | None:intergenic | 25.0% |
| ! | TATTTACTTTCGGTATATCT+AGG | - | chr5_2:30432415-30432434 | Msa0767380:intron | 25.0% |
| !!! | TTTTCCAAAGAGTATTTGAA+TGG | - | chr5_2:30432558-30432577 | Msa0767380:CDS | 25.0% |
| ! | GAGGAATATAATTTCAAAGT+TGG | - | chr5_2:30432699-30432718 | Msa0767380:CDS | 25.0% |
| ! | TTTATATGCAAATGGATGAA+AGG | - | chr5_2:30432886-30432905 | Msa0767380:intron | 25.0% |
| ! | ACAACATGATTTATAGTAGA+CGG | + | chr5_2:30432933-30432952 | None:intergenic | 25.0% |
| !! | ATTGAGTTTTTCTTTGGTTA+CGG | - | chr5_2:30432981-30433000 | Msa0767380:intron | 25.0% |
| !!! | TTTGATTTCCTCTTCATTTT+AGG | + | chr5_2:30433082-30433101 | None:intergenic | 25.0% |
| ! | TGAAAAAACATTGTGACTTA+TGG | + | chr5_2:30431350-30431369 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTAGTGCAATTGT+TGG | - | chr5_2:30431488-30431507 | Msa0767380:intron | 25.0% |
| ! | AACACTATTCAATGAGTTAT+GGG | - | chr5_2:30431705-30431724 | Msa0767380:CDS | 25.0% |
| !!! | TAGTTTTTAGACTTGAAACA+AGG | - | chr5_2:30431735-30431754 | Msa0767380:CDS | 25.0% |
| ! | AGACGATTATATTGAGATTT+CGG | - | chr5_2:30431886-30431905 | Msa0767380:intron | 25.0% |
| ! | AAAAGAATGAAAATCAGTGA+TGG | - | chr5_2:30431950-30431969 | Msa0767380:intron | 25.0% |
| ! | GAGGAGAATAATTAAAATGA+AGG | + | chr5_2:30432052-30432071 | None:intergenic | 25.0% |
| ! | TCAATTTAACATTATGATGG+AGG | + | chr5_2:30432071-30432090 | None:intergenic | 25.0% |
| ! | ATATAGATACCATATGTTCA+AGG | + | chr5_2:30432279-30432298 | None:intergenic | 25.0% |
| !! | ATGTGGAAATTGATTCTAAA+AGG | + | chr5_2:30432310-30432329 | None:intergenic | 25.0% |
| ! | TTAAACTAAAAAGAATGGCA+AGG | + | chr5_2:30432385-30432404 | None:intergenic | 25.0% |
| ! | TATTTACTTTCGGTATATCT+AGG | - | chr5_2:30432415-30432434 | Msa0767380:intron | 25.0% |
| !!! | TTTTCCAAAGAGTATTTGAA+TGG | - | chr5_2:30432558-30432577 | Msa0767380:CDS | 25.0% |
| ! | GAGGAATATAATTTCAAAGT+TGG | - | chr5_2:30432699-30432718 | Msa0767380:CDS | 25.0% |
| ! | TTTATATGCAAATGGATGAA+AGG | - | chr5_2:30432886-30432905 | Msa0767380:intron | 25.0% |
| ! | ACAACATGATTTATAGTAGA+CGG | + | chr5_2:30432933-30432952 | None:intergenic | 25.0% |
| !! | ATTGAGTTTTTCTTTGGTTA+CGG | - | chr5_2:30432981-30433000 | Msa0767380:intron | 25.0% |
| !!! | TTTGATTTCCTCTTCATTTT+AGG | + | chr5_2:30433082-30433101 | None:intergenic | 25.0% |
| TATTTCTTCACAAAACTCCT+AGG | + | chr5_2:30431566-30431585 | None:intergenic | 30.0% | |
| !! | AGGAGTTTTGTGAAGAAATA+TGG | - | chr5_2:30431566-30431585 | Msa0767380:intron | 30.0% |
| !! | GGAGTTTTGTGAAGAAATAT+GGG | - | chr5_2:30431567-30431586 | Msa0767380:intron | 30.0% |
| TTCTACCAAATGGTGATAAA+TGG | - | chr5_2:30431618-30431637 | Msa0767380:CDS | 30.0% | |
| TCTACCAAATGGTGATAAAT+GGG | - | chr5_2:30431619-30431638 | Msa0767380:CDS | 30.0% | |
| GTGATAAATGGGAAGTAAAT+TGG | - | chr5_2:30431630-30431649 | Msa0767380:CDS | 30.0% | |
| CAACACTATTCAATGAGTTA+TGG | - | chr5_2:30431704-30431723 | Msa0767380:CDS | 30.0% | |
| TTCTTTCAACTTGATCTCTA+GGG | + | chr5_2:30431826-30431845 | None:intergenic | 30.0% | |
| TTTCTTTCAACTTGATCTCT+AGG | + | chr5_2:30431827-30431846 | None:intergenic | 30.0% | |
| ! | CTGATTTTCATTCTTTTCTG+AGG | + | chr5_2:30431947-30431966 | None:intergenic | 30.0% |
| !! | TTTAGGTTTTTCCTTTGAGA+TGG | + | chr5_2:30431977-30431996 | None:intergenic | 30.0% |
| TCAAAGGAAAAACCTAAAGA+AGG | - | chr5_2:30431979-30431998 | Msa0767380:intron | 30.0% | |
| TTTACAATTTCAGGAGGTAA+TGG | - | chr5_2:30432115-30432134 | Msa0767380:intron | 30.0% | |
| CATCAAATGAAGCTATGAAT+TGG | - | chr5_2:30432167-30432186 | Msa0767380:CDS | 30.0% | |
| GTTATCGGAATGAAAATTCA+TGG | + | chr5_2:30432224-30432243 | None:intergenic | 30.0% | |
| CTTTCCATTCAAATACTCTT+TGG | + | chr5_2:30432565-30432584 | None:intergenic | 30.0% | |
| !! | CAAAGAGTATTTGAATGGAA+AGG | - | chr5_2:30432563-30432582 | Msa0767380:CDS | 30.0% |
| AGTATTTGAATGGAAAGGAT+GGG | - | chr5_2:30432568-30432587 | Msa0767380:CDS | 30.0% | |
| ! | AGCATTGAACTTGAAGTTTA+AGG | + | chr5_2:30432634-30432653 | None:intergenic | 30.0% |
| ! | TTTAATACCTTGAAAGTGTG+CGG | + | chr5_2:30432808-30432827 | None:intergenic | 30.0% |
| CAACATGATTTATAGTAGAC+GGG | + | chr5_2:30432932-30432951 | None:intergenic | 30.0% | |
| TATTTCTTCACAAAACTCCT+AGG | + | chr5_2:30431566-30431585 | None:intergenic | 30.0% | |
| !! | AGGAGTTTTGTGAAGAAATA+TGG | - | chr5_2:30431566-30431585 | Msa0767380:intron | 30.0% |
| !! | GGAGTTTTGTGAAGAAATAT+GGG | - | chr5_2:30431567-30431586 | Msa0767380:intron | 30.0% |
| TTCTACCAAATGGTGATAAA+TGG | - | chr5_2:30431618-30431637 | Msa0767380:CDS | 30.0% | |
| TCTACCAAATGGTGATAAAT+GGG | - | chr5_2:30431619-30431638 | Msa0767380:CDS | 30.0% | |
| GTGATAAATGGGAAGTAAAT+TGG | - | chr5_2:30431630-30431649 | Msa0767380:CDS | 30.0% | |
| CAACACTATTCAATGAGTTA+TGG | - | chr5_2:30431704-30431723 | Msa0767380:CDS | 30.0% | |
| TTCTTTCAACTTGATCTCTA+GGG | + | chr5_2:30431826-30431845 | None:intergenic | 30.0% | |
| TTTCTTTCAACTTGATCTCT+AGG | + | chr5_2:30431827-30431846 | None:intergenic | 30.0% | |
| ! | CTGATTTTCATTCTTTTCTG+AGG | + | chr5_2:30431947-30431966 | None:intergenic | 30.0% |
| !! | TTTAGGTTTTTCCTTTGAGA+TGG | + | chr5_2:30431977-30431996 | None:intergenic | 30.0% |
| TCAAAGGAAAAACCTAAAGA+AGG | - | chr5_2:30431979-30431998 | Msa0767380:intron | 30.0% | |
| TTTACAATTTCAGGAGGTAA+TGG | - | chr5_2:30432115-30432134 | Msa0767380:intron | 30.0% | |
| CATCAAATGAAGCTATGAAT+TGG | - | chr5_2:30432167-30432186 | Msa0767380:CDS | 30.0% | |
| GTTATCGGAATGAAAATTCA+TGG | + | chr5_2:30432224-30432243 | None:intergenic | 30.0% | |
| CTTTCCATTCAAATACTCTT+TGG | + | chr5_2:30432565-30432584 | None:intergenic | 30.0% | |
| !! | CAAAGAGTATTTGAATGGAA+AGG | - | chr5_2:30432563-30432582 | Msa0767380:CDS | 30.0% |
| AGTATTTGAATGGAAAGGAT+GGG | - | chr5_2:30432568-30432587 | Msa0767380:CDS | 30.0% | |
| ! | AGCATTGAACTTGAAGTTTA+AGG | + | chr5_2:30432634-30432653 | None:intergenic | 30.0% |
| ! | TTTAATACCTTGAAAGTGTG+CGG | + | chr5_2:30432808-30432827 | None:intergenic | 30.0% |
| CAACATGATTTATAGTAGAC+GGG | + | chr5_2:30432932-30432951 | None:intergenic | 30.0% | |
| CAATGTAACAGATGATTCCT+AGG | - | chr5_2:30431546-30431565 | Msa0767380:intron | 35.0% | |
| ATCACCATTTGGTAGAACTA+GGG | + | chr5_2:30431615-30431634 | None:intergenic | 35.0% | |
| TATCACCATTTGGTAGAACT+AGG | + | chr5_2:30431616-30431635 | None:intergenic | 35.0% | |
| ACTTCCCATTTATCACCATT+TGG | + | chr5_2:30431626-30431645 | None:intergenic | 35.0% | |
| !!! | CATTTTGAAACACAACGTCA+TGG | + | chr5_2:30431667-30431686 | None:intergenic | 35.0% |
| CATGACGTTGTGTTTCAAAA+TGG | - | chr5_2:30431665-30431684 | Msa0767380:CDS | 35.0% | |
| ACGTTGTGTTTCAAAATGGT+TGG | - | chr5_2:30431669-30431688 | Msa0767380:CDS | 35.0% | |
| CGTTGTGTTTCAAAATGGTT+GGG | - | chr5_2:30431670-30431689 | Msa0767380:CDS | 35.0% | |
| !! | GATATTTGACAAAAGCGCTT+TGG | - | chr5_2:30431775-30431794 | Msa0767380:CDS | 35.0% |
| ACGAATGAAAAAGGGGTTAT+CGG | + | chr5_2:30432239-30432258 | None:intergenic | 35.0% | |
| AGATACCATATGTTCAAGGT+AGG | + | chr5_2:30432275-30432294 | None:intergenic | 35.0% | |
| ! | TACTCTTTGGAAAACGATGT+TGG | + | chr5_2:30432552-30432571 | None:intergenic | 35.0% |
| GAGTATTTGAATGGAAAGGA+TGG | - | chr5_2:30432567-30432586 | Msa0767380:CDS | 35.0% | |
| GTATGTATTCTTGCAGATTC+TGG | - | chr5_2:30433052-30433071 | Msa0767380:CDS | 35.0% | |
| CTGGAAATCCTAAAATGAAG+AGG | - | chr5_2:30433071-30433090 | Msa0767380:CDS | 35.0% | |
| CAATGTAACAGATGATTCCT+AGG | - | chr5_2:30431546-30431565 | Msa0767380:intron | 35.0% | |
| ATCACCATTTGGTAGAACTA+GGG | + | chr5_2:30431615-30431634 | None:intergenic | 35.0% | |
| TATCACCATTTGGTAGAACT+AGG | + | chr5_2:30431616-30431635 | None:intergenic | 35.0% | |
| ACTTCCCATTTATCACCATT+TGG | + | chr5_2:30431626-30431645 | None:intergenic | 35.0% | |
| !!! | CATTTTGAAACACAACGTCA+TGG | + | chr5_2:30431667-30431686 | None:intergenic | 35.0% |
| CATGACGTTGTGTTTCAAAA+TGG | - | chr5_2:30431665-30431684 | Msa0767380:CDS | 35.0% | |
| ACGTTGTGTTTCAAAATGGT+TGG | - | chr5_2:30431669-30431688 | Msa0767380:CDS | 35.0% | |
| CGTTGTGTTTCAAAATGGTT+GGG | - | chr5_2:30431670-30431689 | Msa0767380:CDS | 35.0% | |
| !! | GATATTTGACAAAAGCGCTT+TGG | - | chr5_2:30431775-30431794 | Msa0767380:CDS | 35.0% |
| ACGAATGAAAAAGGGGTTAT+CGG | + | chr5_2:30432239-30432258 | None:intergenic | 35.0% | |
| AGATACCATATGTTCAAGGT+AGG | + | chr5_2:30432275-30432294 | None:intergenic | 35.0% | |
| ! | TACTCTTTGGAAAACGATGT+TGG | + | chr5_2:30432552-30432571 | None:intergenic | 35.0% |
| GAGTATTTGAATGGAAAGGA+TGG | - | chr5_2:30432567-30432586 | Msa0767380:CDS | 35.0% | |
| GTATGTATTCTTGCAGATTC+TGG | - | chr5_2:30433052-30433071 | Msa0767380:CDS | 35.0% | |
| CTGGAAATCCTAAAATGAAG+AGG | - | chr5_2:30433071-30433090 | Msa0767380:CDS | 35.0% | |
| TGGAACTGATGAACAACACT+CGG | + | chr5_2:30431330-30431349 | None:intergenic | 40.0% | |
| TTGGTAGAACTAGGGTTACT+GGG | + | chr5_2:30431607-30431626 | None:intergenic | 40.0% | |
| TTTGGTAGAACTAGGGTTAC+TGG | + | chr5_2:30431608-30431627 | None:intergenic | 40.0% | |
| !! | GTAACCCTAGTTCTACCAAA+TGG | - | chr5_2:30431608-30431627 | Msa0767380:intron | 40.0% |
| !! | TGACAAAAGCGCTTTGGAAA+TGG | - | chr5_2:30431781-30431800 | Msa0767380:CDS | 40.0% |
| !! | GCGCTTTGGAAATGGATTAT+TGG | - | chr5_2:30431789-30431808 | Msa0767380:CDS | 40.0% |
| !!! | TTCATTCTTTTCTGAGGTCG+AGG | + | chr5_2:30431941-30431960 | None:intergenic | 40.0% |
| TGCAACGGACGAATGAAAAA+GGG | + | chr5_2:30432247-30432266 | None:intergenic | 40.0% | |
| ATGCAACGGACGAATGAAAA+AGG | + | chr5_2:30432248-30432267 | None:intergenic | 40.0% | |
| TCCATCCTACCTTGAACATA+TGG | - | chr5_2:30432267-30432286 | Msa0767380:CDS | 40.0% | |
| ACCATATGTTCAAGGTAGGA+TGG | + | chr5_2:30432271-30432290 | None:intergenic | 40.0% | |
| !! | TTGGTGATGAGGATAAGACT+TGG | - | chr5_2:30432607-30432626 | Msa0767380:CDS | 40.0% |
| AGTTATGAGTGCTCGATTAG+TGG | + | chr5_2:30432658-30432677 | None:intergenic | 40.0% | |
| AATCGAGCACTCATAACTTC+TGG | - | chr5_2:30432660-30432679 | Msa0767380:CDS | 40.0% | |
| TGGTTGGAGACAAATTGTTG+AGG | - | chr5_2:30432680-30432699 | Msa0767380:CDS | 40.0% | |
| TGGAACTGATGAACAACACT+CGG | + | chr5_2:30431330-30431349 | None:intergenic | 40.0% | |
| TTGGTAGAACTAGGGTTACT+GGG | + | chr5_2:30431607-30431626 | None:intergenic | 40.0% | |
| TTTGGTAGAACTAGGGTTAC+TGG | + | chr5_2:30431608-30431627 | None:intergenic | 40.0% | |
| !! | GTAACCCTAGTTCTACCAAA+TGG | - | chr5_2:30431608-30431627 | Msa0767380:intron | 40.0% |
| !! | TGACAAAAGCGCTTTGGAAA+TGG | - | chr5_2:30431781-30431800 | Msa0767380:CDS | 40.0% |
| !! | GCGCTTTGGAAATGGATTAT+TGG | - | chr5_2:30431789-30431808 | Msa0767380:CDS | 40.0% |
| !!! | TTCATTCTTTTCTGAGGTCG+AGG | + | chr5_2:30431941-30431960 | None:intergenic | 40.0% |
| TGCAACGGACGAATGAAAAA+GGG | + | chr5_2:30432247-30432266 | None:intergenic | 40.0% | |
| ATGCAACGGACGAATGAAAA+AGG | + | chr5_2:30432248-30432267 | None:intergenic | 40.0% | |
| TCCATCCTACCTTGAACATA+TGG | - | chr5_2:30432267-30432286 | Msa0767380:CDS | 40.0% | |
| ACCATATGTTCAAGGTAGGA+TGG | + | chr5_2:30432271-30432290 | None:intergenic | 40.0% | |
| !! | TTGGTGATGAGGATAAGACT+TGG | - | chr5_2:30432607-30432626 | Msa0767380:CDS | 40.0% |
| AGTTATGAGTGCTCGATTAG+TGG | + | chr5_2:30432658-30432677 | None:intergenic | 40.0% | |
| AATCGAGCACTCATAACTTC+TGG | - | chr5_2:30432660-30432679 | Msa0767380:CDS | 40.0% | |
| TGGTTGGAGACAAATTGTTG+AGG | - | chr5_2:30432680-30432699 | Msa0767380:CDS | 40.0% | |
| !! | TCAACTTGATCTCTAGGGCT+TGG | + | chr5_2:30431821-30431840 | None:intergenic | 45.0% |
| TCAGTGATGGTCCATCTCAA+AGG | - | chr5_2:30431963-30431982 | Msa0767380:intron | 45.0% | |
| GCAACGGACGAATGAAAAAG+GGG | + | chr5_2:30432246-30432265 | None:intergenic | 45.0% | |
| TCAAGGTAGGATGGATGCAA+CGG | + | chr5_2:30432262-30432281 | None:intergenic | 45.0% | |
| ATCCTCATCACCAAACACCA+CGG | + | chr5_2:30432601-30432620 | None:intergenic | 45.0% | |
| GAGCACTCATAACTTCTGGT+TGG | - | chr5_2:30432664-30432683 | Msa0767380:CDS | 45.0% | |
| !! | TCAACTTGATCTCTAGGGCT+TGG | + | chr5_2:30431821-30431840 | None:intergenic | 45.0% |
| TCAGTGATGGTCCATCTCAA+AGG | - | chr5_2:30431963-30431982 | Msa0767380:intron | 45.0% | |
| GCAACGGACGAATGAAAAAG+GGG | + | chr5_2:30432246-30432265 | None:intergenic | 45.0% | |
| TCAAGGTAGGATGGATGCAA+CGG | + | chr5_2:30432262-30432281 | None:intergenic | 45.0% | |
| ATCCTCATCACCAAACACCA+CGG | + | chr5_2:30432601-30432620 | None:intergenic | 45.0% | |
| GAGCACTCATAACTTCTGGT+TGG | - | chr5_2:30432664-30432683 | Msa0767380:CDS | 45.0% | |
| AAAGGATGGGATTGCAACCG+TGG | - | chr5_2:30432581-30432600 | Msa0767380:CDS | 50.0% | |
| !! | AACCGTGGTGTTTGGTGATG+AGG | - | chr5_2:30432596-30432615 | Msa0767380:CDS | 50.0% |
| TGCGGAGCTAGATTGATCAC+TGG | + | chr5_2:30432790-30432809 | None:intergenic | 50.0% | |
| ! | TCTAGCTCCGCACACTTTCA+AGG | - | chr5_2:30432798-30432817 | Msa0767380:CDS | 50.0% |
| AAAGGATGGGATTGCAACCG+TGG | - | chr5_2:30432581-30432600 | Msa0767380:CDS | 50.0% | |
| !! | AACCGTGGTGTTTGGTGATG+AGG | - | chr5_2:30432596-30432615 | Msa0767380:CDS | 50.0% |
| TGCGGAGCTAGATTGATCAC+TGG | + | chr5_2:30432790-30432809 | None:intergenic | 50.0% | |
| ! | TCTAGCTCCGCACACTTTCA+AGG | - | chr5_2:30432798-30432817 | Msa0767380:CDS | 50.0% |
| GGGATTGCAACCGTGGTGTT+TGG | - | chr5_2:30432588-30432607 | Msa0767380:CDS | 55.0% | |
| GGGATTGCAACCGTGGTGTT+TGG | - | chr5_2:30432588-30432607 | Msa0767380:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 30431318 | 30433117 | 30431318 | ID=Msa0767380;Name=Msa0767380 |
| chr5_2 | mRNA | 30431318 | 30433117 | 30431318 | ID=Msa0767380-mRNA-1;Parent=Msa0767380;Name=Msa0767380-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|5|0|330 |
| chr5_2 | exon | 30433028 | 30433117 | 30433028 | ID=Msa0767380-mRNA-1:exon:11495;Parent=Msa0767380-mRNA-1 |
| chr5_2 | exon | 30432464 | 30432878 | 30432464 | ID=Msa0767380-mRNA-1:exon:11494;Parent=Msa0767380-mRNA-1 |
| chr5_2 | exon | 30432147 | 30432307 | 30432147 | ID=Msa0767380-mRNA-1:exon:11493;Parent=Msa0767380-mRNA-1 |
| chr5_2 | exon | 30431616 | 30431892 | 30431616 | ID=Msa0767380-mRNA-1:exon:11492;Parent=Msa0767380-mRNA-1 |
| chr5_2 | exon | 30431318 | 30431367 | 30431318 | ID=Msa0767380-mRNA-1:exon:11491;Parent=Msa0767380-mRNA-1 |
| chr5_2 | CDS | 30433028 | 30433117 | 30433028 | ID=Msa0767380-mRNA-1:cds;Parent=Msa0767380-mRNA-1 |
| chr5_2 | CDS | 30432464 | 30432878 | 30432464 | ID=Msa0767380-mRNA-1:cds;Parent=Msa0767380-mRNA-1 |
| chr5_2 | CDS | 30432147 | 30432307 | 30432147 | ID=Msa0767380-mRNA-1:cds;Parent=Msa0767380-mRNA-1 |
| chr5_2 | CDS | 30431616 | 30431892 | 30431616 | ID=Msa0767380-mRNA-1:cds;Parent=Msa0767380-mRNA-1 |
| chr5_2 | CDS | 30431318 | 30431367 | 30431318 | ID=Msa0767380-mRNA-1:cds;Parent=Msa0767380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
