Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767390 | AES97051.1 | 90.244 | 328 | 32 | 0 | 5 | 332 | 3 | 330 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767390 | sp|Q8L3W1|VRN1_ARATH | 28.571 | 343 | 184 | 10 | 18 | 308 | 6 | 339 | 1.59e-32 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767390 | G7JXZ7 | 90.244 | 328 | 32 | 0 | 5 | 332 | 3 | 330 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0767390 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767390 | MtrunA17_Chr5g0419201 | 87.429 | 175 | 22 | 0 | 5 | 179 | 3 | 177 | 2.17e-111 | 321 |
| Msa0767390 | MtrunA17_Chr5g0419211 | 89.130 | 92 | 10 | 0 | 225 | 316 | 10 | 101 | 1.69e-53 | 171 |
| Msa0767390 | MtrunA17_Chr3g0131891 | 33.443 | 305 | 180 | 8 | 18 | 312 | 19 | 310 | 1.33e-46 | 160 |
| Msa0767390 | MtrunA17_Chr7g0233561 | 32.362 | 309 | 180 | 9 | 18 | 308 | 18 | 315 | 2.97e-45 | 157 |
| Msa0767390 | MtrunA17_Chr8g0390841 | 28.829 | 333 | 185 | 8 | 6 | 311 | 30 | 337 | 8.90e-44 | 157 |
| Msa0767390 | MtrunA17_Chr1g0208771 | 29.524 | 315 | 172 | 8 | 34 | 320 | 13 | 305 | 1.04e-40 | 148 |
| Msa0767390 | MtrunA17_Chr7g0233541 | 30.640 | 297 | 179 | 6 | 33 | 312 | 1 | 287 | 1.06e-40 | 144 |
| Msa0767390 | MtrunA17_Chr1g0163261 | 31.562 | 320 | 182 | 9 | 12 | 319 | 3 | 297 | 2.69e-40 | 143 |
| Msa0767390 | MtrunA17_Chr1g0163181 | 33.333 | 294 | 175 | 8 | 27 | 309 | 14 | 297 | 9.40e-40 | 145 |
| Msa0767390 | MtrunA17_Chr7g0233531 | 33.101 | 287 | 168 | 7 | 33 | 312 | 1 | 270 | 9.74e-40 | 141 |
| Msa0767390 | MtrunA17_Chr1g0163251 | 33.447 | 293 | 157 | 9 | 27 | 306 | 14 | 281 | 1.53e-39 | 143 |
| Msa0767390 | MtrunA17_Chr7g0233521 | 31.010 | 287 | 174 | 8 | 33 | 312 | 1 | 270 | 6.54e-38 | 136 |
| Msa0767390 | MtrunA17_Chr3g0103191 | 30.350 | 257 | 159 | 8 | 18 | 271 | 12 | 251 | 2.07e-35 | 129 |
| Msa0767390 | MtrunA17_Chr3g0103181 | 29.021 | 286 | 184 | 5 | 18 | 303 | 12 | 278 | 4.43e-35 | 129 |
| Msa0767390 | MtrunA17_Chr1g0163071 | 29.467 | 319 | 177 | 10 | 33 | 321 | 1 | 301 | 6.75e-34 | 126 |
| Msa0767390 | MtrunA17_Chr3g0103171 | 29.749 | 279 | 167 | 6 | 34 | 303 | 6 | 264 | 1.03e-33 | 125 |
| Msa0767390 | MtrunA17_Chr4g0067431 | 28.261 | 322 | 195 | 10 | 18 | 316 | 15 | 323 | 6.00e-33 | 124 |
| Msa0767390 | MtrunA17_Chr1g0163201 | 28.966 | 290 | 173 | 5 | 34 | 309 | 19 | 289 | 8.15e-33 | 125 |
| Msa0767390 | MtrunA17_Chr7g0233571 | 35.321 | 218 | 117 | 6 | 18 | 222 | 10 | 216 | 2.21e-32 | 120 |
| Msa0767390 | MtrunA17_Chr1g0163231 | 29.934 | 304 | 178 | 8 | 12 | 306 | 3 | 280 | 5.00e-32 | 121 |
| Msa0767390 | MtrunA17_Chr1g0163221 | 29.538 | 325 | 197 | 11 | 1 | 316 | 1 | 302 | 2.73e-31 | 120 |
| Msa0767390 | MtrunA17_Chr1g0171611 | 29.568 | 301 | 171 | 10 | 12 | 306 | 3 | 268 | 1.09e-29 | 115 |
| Msa0767390 | MtrunA17_Chr3g0077411 | 29.000 | 300 | 163 | 8 | 18 | 308 | 262 | 520 | 2.09e-28 | 115 |
| Msa0767390 | MtrunA17_Chr3g0077411 | 32.308 | 130 | 86 | 2 | 18 | 146 | 25 | 153 | 1.90e-16 | 80.1 |
| Msa0767390 | MtrunA17_Chr3g0103151 | 35.032 | 157 | 84 | 4 | 18 | 167 | 12 | 157 | 3.80e-26 | 102 |
| Msa0767390 | MtrunA17_Chr1g0163131 | 29.605 | 304 | 182 | 10 | 18 | 304 | 18 | 306 | 4.65e-26 | 105 |
| Msa0767390 | MtrunA17_Chr3g0077451 | 26.165 | 279 | 153 | 8 | 32 | 308 | 10 | 237 | 7.24e-25 | 100 |
| Msa0767390 | MtrunA17_Chr1g0163101 | 39.552 | 134 | 75 | 3 | 18 | 151 | 17 | 144 | 1.82e-24 | 98.2 |
| Msa0767390 | MtrunA17_Chr3g0103201 | 27.426 | 237 | 142 | 8 | 76 | 303 | 4 | 219 | 8.69e-22 | 92.0 |
| Msa0767390 | MtrunA17_Chr1g0162441 | 31.667 | 180 | 110 | 3 | 18 | 197 | 7 | 173 | 6.27e-21 | 92.8 |
| Msa0767390 | MtrunA17_Chr1g0162441 | 29.054 | 148 | 87 | 5 | 180 | 312 | 255 | 399 | 3.97e-11 | 63.5 |
| Msa0767390 | MtrunA17_Chr5g0429931 | 24.549 | 277 | 165 | 7 | 34 | 308 | 11 | 245 | 7.18e-21 | 90.1 |
| Msa0767390 | MtrunA17_Chr1g0154161 | 25.083 | 303 | 199 | 9 | 18 | 311 | 30 | 313 | 1.97e-20 | 90.1 |
| Msa0767390 | MtrunA17_Chr3g0077461 | 32.847 | 137 | 91 | 1 | 11 | 147 | 230 | 365 | 1.99e-20 | 91.7 |
| Msa0767390 | MtrunA17_Chr3g0077461 | 31.068 | 103 | 70 | 1 | 34 | 136 | 23 | 124 | 4.04e-14 | 72.8 |
| Msa0767390 | MtrunA17_Chr1g0154131 | 24.055 | 291 | 200 | 7 | 29 | 308 | 193 | 473 | 2.03e-20 | 91.7 |
| Msa0767390 | MtrunA17_Chr4g0033961 | 34.483 | 145 | 94 | 1 | 15 | 159 | 3 | 146 | 2.54e-20 | 91.3 |
| Msa0767390 | MtrunA17_Chr1g0163241 | 31.481 | 162 | 96 | 4 | 9 | 170 | 6 | 152 | 2.96e-20 | 86.3 |
| Msa0767390 | MtrunA17_Chr6g0476181 | 36.957 | 138 | 73 | 4 | 33 | 170 | 1 | 124 | 7.40e-20 | 85.1 |
| Msa0767390 | MtrunA17_Chr1g0163121 | 40.000 | 120 | 65 | 4 | 29 | 148 | 6 | 118 | 1.16e-19 | 84.0 |
| Msa0767390 | MtrunA17_Chr1g0163141 | 34.965 | 143 | 84 | 4 | 30 | 172 | 7 | 140 | 3.14e-19 | 84.0 |
| Msa0767390 | MtrunA17_Chr1g0163191 | 38.835 | 103 | 61 | 1 | 25 | 127 | 12 | 112 | 3.79e-19 | 83.2 |
| Msa0767390 | MtrunA17_Chr1g0154111 | 23.512 | 336 | 205 | 8 | 19 | 304 | 26 | 359 | 5.67e-19 | 87.8 |
| Msa0767390 | MtrunA17_Chr1g0162161 | 35.294 | 119 | 70 | 3 | 33 | 151 | 3 | 114 | 1.38e-18 | 81.6 |
| Msa0767390 | MtrunA17_Chr6g0467351 | 38.000 | 100 | 61 | 1 | 18 | 116 | 15 | 114 | 4.23e-18 | 82.0 |
| Msa0767390 | MtrunA17_Chr1g0163081 | 37.931 | 116 | 65 | 4 | 33 | 148 | 5 | 113 | 5.63e-18 | 79.3 |
| Msa0767390 | MtrunA17_Chr1g0162411 | 38.776 | 98 | 60 | 0 | 18 | 115 | 7 | 104 | 1.11e-17 | 83.6 |
| Msa0767390 | MtrunA17_Chr1g0162151 | 40.659 | 91 | 53 | 1 | 226 | 316 | 41 | 130 | 1.72e-16 | 77.4 |
| Msa0767390 | MtrunA17_Chr1g0163061 | 38.000 | 100 | 61 | 1 | 18 | 116 | 15 | 114 | 5.53e-16 | 77.0 |
| Msa0767390 | MtrunA17_Chr4g0009491 | 24.569 | 232 | 136 | 5 | 11 | 242 | 218 | 410 | 8.07e-16 | 77.8 |
| Msa0767390 | MtrunA17_Chr4g0009491 | 24.521 | 261 | 123 | 8 | 32 | 286 | 11 | 203 | 6.02e-14 | 72.4 |
| Msa0767390 | MtrunA17_Chr1g0163161 | 40.777 | 103 | 55 | 4 | 46 | 148 | 1 | 97 | 8.52e-16 | 73.2 |
| Msa0767390 | MtrunA17_Chr3g0077361 | 31.387 | 137 | 87 | 3 | 3 | 138 | 30 | 160 | 2.03e-15 | 77.0 |
| Msa0767390 | MtrunA17_Chr1g0163091 | 36.283 | 113 | 69 | 2 | 206 | 316 | 19 | 130 | 6.93e-15 | 71.6 |
| Msa0767390 | MtrunA17_Chr3g0077381 | 35.294 | 85 | 55 | 0 | 32 | 116 | 34 | 118 | 4.93e-14 | 72.8 |
| Msa0767390 | MtrunA17_Chr3g0077381 | 31.481 | 108 | 73 | 1 | 22 | 129 | 251 | 357 | 2.41e-13 | 70.5 |
| Msa0767390 | MtrunA17_Chr1g0163111 | 32.787 | 122 | 76 | 3 | 207 | 326 | 12 | 129 | 8.59e-14 | 70.1 |
| Msa0767390 | MtrunA17_Chr1g0154211 | 36.667 | 90 | 57 | 0 | 19 | 108 | 23 | 112 | 3.58e-13 | 69.7 |
| Msa0767390 | MtrunA17_Chr6g0476171 | 31.655 | 139 | 91 | 3 | 187 | 321 | 13 | 151 | 3.63e-13 | 68.6 |
| Msa0767390 | MtrunA17_Chr1g0154101 | 38.750 | 80 | 49 | 0 | 29 | 108 | 193 | 272 | 8.48e-12 | 66.2 |
| Msa0767390 | MtrunA17_Chr1g0154101 | 34.444 | 90 | 59 | 0 | 18 | 107 | 25 | 114 | 3.46e-11 | 64.3 |
| Msa0767390 | MtrunA17_Chr1g0154171 | 32.967 | 91 | 61 | 0 | 19 | 109 | 23 | 113 | 1.76e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767390 | AT3G18990.2 | 28.863 | 343 | 183 | 10 | 18 | 308 | 6 | 339 | 7.98e-34 | 128 |
| Msa0767390 | AT3G18990.1 | 28.571 | 343 | 184 | 10 | 18 | 308 | 6 | 339 | 1.62e-33 | 126 |
| Msa0767390 | AT4G01580.1 | 38.095 | 147 | 75 | 4 | 18 | 163 | 30 | 161 | 9.65e-22 | 91.3 |
| Msa0767390 | AT1G49475.1 | 36.943 | 157 | 86 | 5 | 18 | 168 | 34 | 183 | 4.23e-20 | 87.0 |
| Msa0767390 | AT3G18960.2 | 40.367 | 109 | 60 | 1 | 18 | 126 | 30 | 133 | 1.35e-19 | 85.5 |
| Msa0767390 | AT3G18960.1 | 41.414 | 99 | 58 | 0 | 18 | 116 | 30 | 128 | 1.46e-19 | 85.9 |
| Msa0767390 | AT3G18960.3 | 42.169 | 83 | 48 | 0 | 34 | 116 | 9 | 91 | 4.20e-15 | 72.8 |
| Msa0767390 | AT4G33280.1 | 22.260 | 292 | 206 | 7 | 32 | 308 | 37 | 322 | 9.84e-15 | 74.3 |
Find 60 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACCAAATGGTGATAAA+TGG | 0.158299 | 5_2:-30439933 | Msa0767390:CDS |
| AGCATTGAACTTGAAGTTTA+AGG | 0.206027 | 5_2:+30438917 | None:intergenic |
| CTTTCCATTCAAATACTCTT+TGG | 0.236141 | 5_2:+30438986 | None:intergenic |
| GTGATAAATGGGAAGTAAAT+TGG | 0.244779 | 5_2:-30439921 | Msa0767390:CDS |
| GCGCTTTGGAAATGGATTAT+TGG | 0.263628 | 5_2:-30439762 | Msa0767390:CDS |
| AGACGATTATATTGAGATTT+CGG | 0.264534 | 5_2:-30439665 | Msa0767390:CDS |
| ATGCAACGGACGAATGAAAA+AGG | 0.295165 | 5_2:+30439306 | None:intergenic |
| TTTGGTAGAACTAGGGTTAC+TGG | 0.318076 | 5_2:+30439946 | None:intergenic |
| AAACACTACAAAATACTAAA+AGG | 0.340468 | 5_2:-30439357 | Msa0767390:CDS |
| TTTCTTTCAACTTGATCTCT+AGG | 0.366619 | 5_2:+30439727 | None:intergenic |
| CATCAAATGAAGCTATGAAT+TGG | 0.370847 | 5_2:-30439384 | Msa0767390:CDS |
| CCATGACGTGTGGTTTCAAA+AGG | 0.372700 | 5_2:-30439887 | Msa0767390:CDS |
| TCAACTTGATCTCTAGGGCT+TGG | 0.372702 | 5_2:+30439733 | None:intergenic |
| GATATTTGACAAAAGCGCTT+TGG | 0.378554 | 5_2:-30439776 | Msa0767390:CDS |
| CAACACTATTCAATGAGTTA+TGG | 0.379815 | 5_2:-30439847 | Msa0767390:CDS |
| TTTACAATTTCAGGAGGTAA+TGG | 0.380537 | 5_2:-30439436 | Msa0767390:intron |
| TGACAAAAGCGCTTTGGAAA+TGG | 0.381408 | 5_2:-30439770 | Msa0767390:CDS |
| AACACTATTCAATGAGTTAT+GGG | 0.394195 | 5_2:-30439846 | Msa0767390:CDS |
| GAGGAATATAATTTCAAAGT+TGG | 0.395164 | 5_2:-30438849 | Msa0767390:CDS |
| CAATGTAACAGATGCTTCCT+AGG | 0.399104 | 5_2:-30440005 | Msa0767390:intron |
| TCTAGCTCCGCGCACTTTCA+AGG | 0.407616 | 5_2:-30438750 | Msa0767390:intron |
| CCTTTGAGATGGACCATCAC+TGG | 0.419968 | 5_2:+30439588 | None:intergenic |
| TCCATCCTACCTTGAACATA+TGG | 0.422875 | 5_2:-30439284 | Msa0767390:intron |
| ACTTCCCATTTATCACCATT+TGG | 0.427050 | 5_2:+30439928 | None:intergenic |
| GGGATTGCAACCGTGGTGTT+TGG | 0.435175 | 5_2:-30438960 | Msa0767390:CDS |
| AGTTATGAGTGCTCGATTAG+TGG | 0.441965 | 5_2:+30438893 | None:intergenic |
| TCTACCAAATGGTGATAAAT+GGG | 0.445463 | 5_2:-30439932 | Msa0767390:CDS |
| TTCTTTCAACTTGATCTCTA+GGG | 0.452245 | 5_2:+30439728 | None:intergenic |
| GAGTATTTGAATGGAAAGGA+TGG | 0.463140 | 5_2:-30438981 | Msa0767390:CDS |
| AATCGAGCACTCATAACTTC+TGG | 0.465532 | 5_2:-30438888 | Msa0767390:CDS |
| TATCACCATTTGGTAGAACT+AGG | 0.471668 | 5_2:+30439938 | None:intergenic |
| GTTATCGGAATGAAAATTCA+TGG | 0.486333 | 5_2:+30439330 | None:intergenic |
| CGTGTGGTTTCAAAAGGGTT+GGG | 0.493190 | 5_2:-30439881 | Msa0767390:CDS |
| ACGTGTGGTTTCAAAAGGGT+TGG | 0.496889 | 5_2:-30439882 | Msa0767390:CDS |
| CAAAGAGTATTTGAATGGAA+AGG | 0.500378 | 5_2:-30438985 | Msa0767390:CDS |
| TACTCTTTGGAAAACGATGT+TGG | 0.517680 | 5_2:+30438999 | None:intergenic |
| TATTTCTTCACAAAACTCCT+AGG | 0.519057 | 5_2:+30439988 | None:intergenic |
| TTGGTAGAACTAGGGTTACT+GGG | 0.523068 | 5_2:+30439947 | None:intergenic |
| ATCACCATTTGGTAGAACTA+GGG | 0.529841 | 5_2:+30439939 | None:intergenic |
| ACCATATGTTCAAGGTAGGA+TGG | 0.542632 | 5_2:+30439283 | None:intergenic |
| GTAACCCTAGTTCTACCAAA+TGG | 0.543476 | 5_2:-30439943 | Msa0767390:CDS |
| ATATAGATACCATATGTTCA+AGG | 0.544245 | 5_2:+30439275 | None:intergenic |
| CATGACGTGTGGTTTCAAAA+GGG | 0.551350 | 5_2:-30439886 | Msa0767390:CDS |
| AGTATTTGAATGGAAAGGAT+GGG | 0.554047 | 5_2:-30438980 | Msa0767390:CDS |
| CGCGGAGCTAGATTGATCAC+TGG | 0.561180 | 5_2:+30438761 | None:intergenic |
| AAAAGAATGAAAACCAGTGA+TGG | 0.566067 | 5_2:-30439601 | Msa0767390:intron |
| AACCGTGGTGTTTGGTGATG+AGG | 0.573245 | 5_2:-30438952 | Msa0767390:CDS |
| GAGCACTCATAACTTCTGGT+TGG | 0.583650 | 5_2:-30438884 | Msa0767390:CDS |
| CTGGAAATCCTAAAATGAAG+AGG | 0.585261 | 5_2:-30438477 | Msa0767390:CDS |
| TGGAACTGATGAACAATACT+CGG | 0.587143 | 5_2:+30440224 | None:intergenic |
| TGGTTGGAGACAAATTGTTG+AGG | 0.606845 | 5_2:-30438868 | Msa0767390:CDS |
| AGATACCATATGTTCAAGGT+AGG | 0.608884 | 5_2:+30439279 | None:intergenic |
| TGATGAACAATACTCGGAGT+CGG | 0.631443 | 5_2:+30440230 | None:intergenic |
| TTTAATACCTTGAAAGTGCG+CGG | 0.633523 | 5_2:+30438743 | None:intergenic |
| CATGAAGATGCTGAAAAGAG+TGG | 0.644431 | 5_2:-30439694 | Msa0767390:CDS |
| TAAAACGTTACCATGACGTG+TGG | 0.650179 | 5_2:-30439897 | Msa0767390:CDS |
| TCAAGGTAGGATGGATGCAA+CGG | 0.653476 | 5_2:+30439292 | None:intergenic |
| AAAGGATGGGATTGCAACCG+TGG | 0.682554 | 5_2:-30438967 | Msa0767390:CDS |
| ATCCTCATCACCAAACACCA+CGG | 0.689007 | 5_2:+30438950 | None:intergenic |
| TTGGTGATGAGGATAAGACT+TGG | 0.724527 | 5_2:-30438941 | Msa0767390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAGAAAATTAAATAAA+AGG | + | chr5_2:30438567-30438586 | None:intergenic | 10.0% |
| !!! | ATTTTCTACTTTAATATTTT+TGG | - | chr5_2:30438575-30438594 | Msa0767390:intron | 10.0% |
| !! | ATTAATTAAACTAAAAAGAA+TGG | + | chr5_2:30439532-30439551 | None:intergenic | 10.0% |
| !! | TTAATGAATTTATTTACTTT+CGG | - | chr5_2:30439547-30439566 | Msa0767390:intron | 10.0% |
| !! | AAAGTAGAAAATTAAATAAA+AGG | + | chr5_2:30438567-30438586 | None:intergenic | 10.0% |
| !!! | ATTTTCTACTTTAATATTTT+TGG | - | chr5_2:30438575-30438594 | Msa0767390:intron | 10.0% |
| !! | ATTAATTAAACTAAAAAGAA+TGG | + | chr5_2:30439532-30439551 | None:intergenic | 10.0% |
| !! | TTAATGAATTTATTTACTTT+CGG | - | chr5_2:30439547-30439566 | Msa0767390:intron | 10.0% |
| !!! | AGTATTTTATTTACAATTTC+AGG | - | chr5_2:30439247-30439266 | Msa0767390:intron | 15.0% |
| !! | AAGAAAAAATATCAAGATTT+AGG | + | chr5_2:30439643-30439662 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTTATATGCAAA+TGG | - | chr5_2:30440022-30440041 | Msa0767390:intron | 15.0% |
| !!! | AGTATTTTATTTACAATTTC+AGG | - | chr5_2:30439247-30439266 | Msa0767390:intron | 15.0% |
| !! | AAGAAAAAATATCAAGATTT+AGG | + | chr5_2:30439643-30439662 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTTATATGCAAA+TGG | - | chr5_2:30440022-30440041 | Msa0767390:intron | 15.0% |
| !!! | TACAATCTCTTTCTTTTTAA+GGG | + | chr5_2:30438532-30438551 | None:intergenic | 20.0% |
| !!! | TTACAATCTCTTTCTTTTTA+AGG | + | chr5_2:30438533-30438552 | None:intergenic | 20.0% |
| !! | TATGAATGTGTCTAAATAAA+AGG | + | chr5_2:30438607-30438626 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGTGCTATTGT+TGG | - | chr5_2:30438629-30438648 | Msa0767390:intron | 20.0% |
| !!! | CATTTATTTTTTCCTTCTTT+AGG | + | chr5_2:30439135-30439154 | None:intergenic | 20.0% |
| !! | AAAGAAGGAAAAAATAAATG+TGG | - | chr5_2:30439135-30439154 | Msa0767390:intron | 20.0% |
| !! | GAAGAGAATAATTAAAATGA+AGG | + | chr5_2:30439193-30439212 | None:intergenic | 20.0% |
| !! | GTATCAATTTAACATTATGA+TGG | + | chr5_2:30439215-30439234 | None:intergenic | 20.0% |
| !!! | ATTTTATTTACAATTTCAGG+AGG | - | chr5_2:30439250-30439269 | Msa0767390:intron | 20.0% |
| !! | AAACACTACAAAATACTAAA+AGG | - | chr5_2:30439335-30439354 | Msa0767390:CDS | 20.0% |
| !! | TTAAACTAGATAGTAAAATG+TGG | + | chr5_2:30439468-30439487 | None:intergenic | 20.0% |
| !!! | AACAATATTGAGTTTTTCTT+TGG | - | chr5_2:30440119-30440138 | Msa0767390:intron | 20.0% |
| !!! | TACAATCTCTTTCTTTTTAA+GGG | + | chr5_2:30438532-30438551 | None:intergenic | 20.0% |
| !!! | TTACAATCTCTTTCTTTTTA+AGG | + | chr5_2:30438533-30438552 | None:intergenic | 20.0% |
| !! | TATGAATGTGTCTAAATAAA+AGG | + | chr5_2:30438607-30438626 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGTGCTATTGT+TGG | - | chr5_2:30438629-30438648 | Msa0767390:intron | 20.0% |
| !!! | CATTTATTTTTTCCTTCTTT+AGG | + | chr5_2:30439135-30439154 | None:intergenic | 20.0% |
| !! | AAAGAAGGAAAAAATAAATG+TGG | - | chr5_2:30439135-30439154 | Msa0767390:intron | 20.0% |
| !! | GAAGAGAATAATTAAAATGA+AGG | + | chr5_2:30439193-30439212 | None:intergenic | 20.0% |
| !! | GTATCAATTTAACATTATGA+TGG | + | chr5_2:30439215-30439234 | None:intergenic | 20.0% |
| !!! | ATTTTATTTACAATTTCAGG+AGG | - | chr5_2:30439250-30439269 | Msa0767390:intron | 20.0% |
| !! | AAACACTACAAAATACTAAA+AGG | - | chr5_2:30439335-30439354 | Msa0767390:CDS | 20.0% |
| !! | TTAAACTAGATAGTAAAATG+TGG | + | chr5_2:30439468-30439487 | None:intergenic | 20.0% |
| !!! | AACAATATTGAGTTTTTCTT+TGG | - | chr5_2:30440119-30440138 | Msa0767390:intron | 20.0% |
| ! | TGAAAAAACATTGTGACTTA+TGG | + | chr5_2:30438491-30438510 | None:intergenic | 25.0% |
| ! | AACACTATTCAATGAGTTAT+GGG | - | chr5_2:30438846-30438865 | Msa0767390:CDS | 25.0% |
| !!! | TAGTTTTTAGACTTGAAACA+AGG | - | chr5_2:30438876-30438895 | Msa0767390:CDS | 25.0% |
| ! | AGACGATTATATTGAGATTT+CGG | - | chr5_2:30439027-30439046 | Msa0767390:intron | 25.0% |
| ! | AATGTGGAACAAAAAATCAA+AGG | - | chr5_2:30439151-30439170 | Msa0767390:intron | 25.0% |
| ! | ATATAGATACCATATGTTCA+AGG | + | chr5_2:30439420-30439439 | None:intergenic | 25.0% |
| !! | ATGTGGAAATTGATTCTAAA+AGG | + | chr5_2:30439451-30439470 | None:intergenic | 25.0% |
| ! | TTAAACTAAAAAGAATGGCA+AGG | + | chr5_2:30439527-30439546 | None:intergenic | 25.0% |
| ! | TATTTACTTTCGGTATATCT+AGG | - | chr5_2:30439557-30439576 | Msa0767390:intron | 25.0% |
| ! | TCTTGTGTTTAAACGATAAT+TGG | - | chr5_2:30439659-30439678 | Msa0767390:CDS | 25.0% |
| !!! | TTTTCCAAAGAGTATTTGAA+TGG | - | chr5_2:30439702-30439721 | Msa0767390:CDS | 25.0% |
| ! | GAGGAATATAATTTCAAAGT+TGG | - | chr5_2:30439843-30439862 | Msa0767390:CDS | 25.0% |
| ! | TTTATATGCAAATGGATGAA+AGG | - | chr5_2:30440030-30440049 | Msa0767390:intron | 25.0% |
| ! | ACAACATGATTTATAGTAGA+CGG | + | chr5_2:30440077-30440096 | None:intergenic | 25.0% |
| !! | ATTGAGTTTTTCTTTGGTTA+CGG | - | chr5_2:30440125-30440144 | Msa0767390:intron | 25.0% |
| !!! | TTTGATTTCCTCTTCATTTT+AGG | + | chr5_2:30440226-30440245 | None:intergenic | 25.0% |
| ! | TGAAAAAACATTGTGACTTA+TGG | + | chr5_2:30438491-30438510 | None:intergenic | 25.0% |
| ! | AACACTATTCAATGAGTTAT+GGG | - | chr5_2:30438846-30438865 | Msa0767390:CDS | 25.0% |
| !!! | TAGTTTTTAGACTTGAAACA+AGG | - | chr5_2:30438876-30438895 | Msa0767390:CDS | 25.0% |
| ! | AGACGATTATATTGAGATTT+CGG | - | chr5_2:30439027-30439046 | Msa0767390:intron | 25.0% |
| ! | AATGTGGAACAAAAAATCAA+AGG | - | chr5_2:30439151-30439170 | Msa0767390:intron | 25.0% |
| ! | ATATAGATACCATATGTTCA+AGG | + | chr5_2:30439420-30439439 | None:intergenic | 25.0% |
| !! | ATGTGGAAATTGATTCTAAA+AGG | + | chr5_2:30439451-30439470 | None:intergenic | 25.0% |
| ! | TTAAACTAAAAAGAATGGCA+AGG | + | chr5_2:30439527-30439546 | None:intergenic | 25.0% |
| ! | TATTTACTTTCGGTATATCT+AGG | - | chr5_2:30439557-30439576 | Msa0767390:intron | 25.0% |
| ! | TCTTGTGTTTAAACGATAAT+TGG | - | chr5_2:30439659-30439678 | Msa0767390:CDS | 25.0% |
| !!! | TTTTCCAAAGAGTATTTGAA+TGG | - | chr5_2:30439702-30439721 | Msa0767390:CDS | 25.0% |
| ! | GAGGAATATAATTTCAAAGT+TGG | - | chr5_2:30439843-30439862 | Msa0767390:CDS | 25.0% |
| ! | TTTATATGCAAATGGATGAA+AGG | - | chr5_2:30440030-30440049 | Msa0767390:intron | 25.0% |
| ! | ACAACATGATTTATAGTAGA+CGG | + | chr5_2:30440077-30440096 | None:intergenic | 25.0% |
| !! | ATTGAGTTTTTCTTTGGTTA+CGG | - | chr5_2:30440125-30440144 | Msa0767390:intron | 25.0% |
| !!! | TTTGATTTCCTCTTCATTTT+AGG | + | chr5_2:30440226-30440245 | None:intergenic | 25.0% |
| TATTTCTTCACAAAACTCCT+AGG | + | chr5_2:30438707-30438726 | None:intergenic | 30.0% | |
| !! | AGGAGTTTTGTGAAGAAATA+TGG | - | chr5_2:30438707-30438726 | Msa0767390:intron | 30.0% |
| TTCTACCAAATGGTGATAAA+TGG | - | chr5_2:30438759-30438778 | Msa0767390:CDS | 30.0% | |
| TCTACCAAATGGTGATAAAT+GGG | - | chr5_2:30438760-30438779 | Msa0767390:CDS | 30.0% | |
| GTGATAAATGGGAAGTAAAT+TGG | - | chr5_2:30438771-30438790 | Msa0767390:CDS | 30.0% | |
| CAACACTATTCAATGAGTTA+TGG | - | chr5_2:30438845-30438864 | Msa0767390:CDS | 30.0% | |
| TTCTTTCAACTTGATCTCTA+GGG | + | chr5_2:30438967-30438986 | None:intergenic | 30.0% | |
| TTTCTTTCAACTTGATCTCT+AGG | + | chr5_2:30438968-30438987 | None:intergenic | 30.0% | |
| AAAAGAATGAAAACCAGTGA+TGG | - | chr5_2:30439091-30439110 | Msa0767390:intron | 30.0% | |
| !! | TTTAGGTTTTTCCTTTGAGA+TGG | + | chr5_2:30439118-30439137 | None:intergenic | 30.0% |
| TCAAAGGAAAAACCTAAAGA+AGG | - | chr5_2:30439120-30439139 | Msa0767390:intron | 30.0% | |
| TTTACAATTTCAGGAGGTAA+TGG | - | chr5_2:30439256-30439275 | Msa0767390:intron | 30.0% | |
| CATCAAATGAAGCTATGAAT+TGG | - | chr5_2:30439308-30439327 | Msa0767390:CDS | 30.0% | |
| GTTATCGGAATGAAAATTCA+TGG | + | chr5_2:30439365-30439384 | None:intergenic | 30.0% | |
| CTTTCCATTCAAATACTCTT+TGG | + | chr5_2:30439709-30439728 | None:intergenic | 30.0% | |
| !! | CAAAGAGTATTTGAATGGAA+AGG | - | chr5_2:30439707-30439726 | Msa0767390:CDS | 30.0% |
| AGTATTTGAATGGAAAGGAT+GGG | - | chr5_2:30439712-30439731 | Msa0767390:CDS | 30.0% | |
| ! | AGCATTGAACTTGAAGTTTA+AGG | + | chr5_2:30439778-30439797 | None:intergenic | 30.0% |
| CAACATGATTTATAGTAGAC+GGG | + | chr5_2:30440076-30440095 | None:intergenic | 30.0% | |
| TATTTCTTCACAAAACTCCT+AGG | + | chr5_2:30438707-30438726 | None:intergenic | 30.0% | |
| !! | AGGAGTTTTGTGAAGAAATA+TGG | - | chr5_2:30438707-30438726 | Msa0767390:intron | 30.0% |
| TTCTACCAAATGGTGATAAA+TGG | - | chr5_2:30438759-30438778 | Msa0767390:CDS | 30.0% | |
| TCTACCAAATGGTGATAAAT+GGG | - | chr5_2:30438760-30438779 | Msa0767390:CDS | 30.0% | |
| GTGATAAATGGGAAGTAAAT+TGG | - | chr5_2:30438771-30438790 | Msa0767390:CDS | 30.0% | |
| CAACACTATTCAATGAGTTA+TGG | - | chr5_2:30438845-30438864 | Msa0767390:CDS | 30.0% | |
| TTCTTTCAACTTGATCTCTA+GGG | + | chr5_2:30438967-30438986 | None:intergenic | 30.0% | |
| TTTCTTTCAACTTGATCTCT+AGG | + | chr5_2:30438968-30438987 | None:intergenic | 30.0% | |
| AAAAGAATGAAAACCAGTGA+TGG | - | chr5_2:30439091-30439110 | Msa0767390:intron | 30.0% | |
| !! | TTTAGGTTTTTCCTTTGAGA+TGG | + | chr5_2:30439118-30439137 | None:intergenic | 30.0% |
| TCAAAGGAAAAACCTAAAGA+AGG | - | chr5_2:30439120-30439139 | Msa0767390:intron | 30.0% | |
| TTTACAATTTCAGGAGGTAA+TGG | - | chr5_2:30439256-30439275 | Msa0767390:intron | 30.0% | |
| CATCAAATGAAGCTATGAAT+TGG | - | chr5_2:30439308-30439327 | Msa0767390:CDS | 30.0% | |
| GTTATCGGAATGAAAATTCA+TGG | + | chr5_2:30439365-30439384 | None:intergenic | 30.0% | |
| CTTTCCATTCAAATACTCTT+TGG | + | chr5_2:30439709-30439728 | None:intergenic | 30.0% | |
| !! | CAAAGAGTATTTGAATGGAA+AGG | - | chr5_2:30439707-30439726 | Msa0767390:CDS | 30.0% |
| AGTATTTGAATGGAAAGGAT+GGG | - | chr5_2:30439712-30439731 | Msa0767390:CDS | 30.0% | |
| ! | AGCATTGAACTTGAAGTTTA+AGG | + | chr5_2:30439778-30439797 | None:intergenic | 30.0% |
| CAACATGATTTATAGTAGAC+GGG | + | chr5_2:30440076-30440095 | None:intergenic | 30.0% | |
| TGGAACTGATGAACAATACT+CGG | + | chr5_2:30438471-30438490 | None:intergenic | 35.0% | |
| ATCACCATTTGGTAGAACTA+GGG | + | chr5_2:30438756-30438775 | None:intergenic | 35.0% | |
| TATCACCATTTGGTAGAACT+AGG | + | chr5_2:30438757-30438776 | None:intergenic | 35.0% | |
| ACTTCCCATTTATCACCATT+TGG | + | chr5_2:30438767-30438786 | None:intergenic | 35.0% | |
| !! | GATATTTGACAAAAGCGCTT+TGG | - | chr5_2:30438916-30438935 | Msa0767390:CDS | 35.0% |
| !! | CTGGTTTTCATTCTTTTCTG+AGG | + | chr5_2:30439088-30439107 | None:intergenic | 35.0% |
| ACGAATGAAAAAGGGGTTAT+CGG | + | chr5_2:30439380-30439399 | None:intergenic | 35.0% | |
| AGATACCATATGTTCAAGGT+AGG | + | chr5_2:30439416-30439435 | None:intergenic | 35.0% | |
| ! | TACTCTTTGGAAAACGATGT+TGG | + | chr5_2:30439696-30439715 | None:intergenic | 35.0% |
| GAGTATTTGAATGGAAAGGA+TGG | - | chr5_2:30439711-30439730 | Msa0767390:CDS | 35.0% | |
| ! | TTTAATACCTTGAAAGTGCG+CGG | + | chr5_2:30439952-30439971 | None:intergenic | 35.0% |
| GTATGTATTCTTGCAGATTC+TGG | - | chr5_2:30440196-30440215 | Msa0767390:CDS | 35.0% | |
| CTGGAAATCCTAAAATGAAG+AGG | - | chr5_2:30440215-30440234 | Msa0767390:CDS | 35.0% | |
| TGGAACTGATGAACAATACT+CGG | + | chr5_2:30438471-30438490 | None:intergenic | 35.0% | |
| ATCACCATTTGGTAGAACTA+GGG | + | chr5_2:30438756-30438775 | None:intergenic | 35.0% | |
| TATCACCATTTGGTAGAACT+AGG | + | chr5_2:30438757-30438776 | None:intergenic | 35.0% | |
| ACTTCCCATTTATCACCATT+TGG | + | chr5_2:30438767-30438786 | None:intergenic | 35.0% | |
| !! | GATATTTGACAAAAGCGCTT+TGG | - | chr5_2:30438916-30438935 | Msa0767390:CDS | 35.0% |
| !! | CTGGTTTTCATTCTTTTCTG+AGG | + | chr5_2:30439088-30439107 | None:intergenic | 35.0% |
| ACGAATGAAAAAGGGGTTAT+CGG | + | chr5_2:30439380-30439399 | None:intergenic | 35.0% | |
| AGATACCATATGTTCAAGGT+AGG | + | chr5_2:30439416-30439435 | None:intergenic | 35.0% | |
| ! | TACTCTTTGGAAAACGATGT+TGG | + | chr5_2:30439696-30439715 | None:intergenic | 35.0% |
| GAGTATTTGAATGGAAAGGA+TGG | - | chr5_2:30439711-30439730 | Msa0767390:CDS | 35.0% | |
| ! | TTTAATACCTTGAAAGTGCG+CGG | + | chr5_2:30439952-30439971 | None:intergenic | 35.0% |
| GTATGTATTCTTGCAGATTC+TGG | - | chr5_2:30440196-30440215 | Msa0767390:CDS | 35.0% | |
| CTGGAAATCCTAAAATGAAG+AGG | - | chr5_2:30440215-30440234 | Msa0767390:CDS | 35.0% | |
| TGATGAACAATACTCGGAGT+CGG | + | chr5_2:30438465-30438484 | None:intergenic | 40.0% | |
| CAATGTAACAGATGCTTCCT+AGG | - | chr5_2:30438687-30438706 | Msa0767390:intron | 40.0% | |
| TTGGTAGAACTAGGGTTACT+GGG | + | chr5_2:30438748-30438767 | None:intergenic | 40.0% | |
| TTTGGTAGAACTAGGGTTAC+TGG | + | chr5_2:30438749-30438768 | None:intergenic | 40.0% | |
| !! | GTAACCCTAGTTCTACCAAA+TGG | - | chr5_2:30438749-30438768 | Msa0767390:intron | 40.0% |
| TAAAACGTTACCATGACGTG+TGG | - | chr5_2:30438795-30438814 | Msa0767390:CDS | 40.0% | |
| CATGACGTGTGGTTTCAAAA+GGG | - | chr5_2:30438806-30438825 | Msa0767390:CDS | 40.0% | |
| !! | TGACAAAAGCGCTTTGGAAA+TGG | - | chr5_2:30438922-30438941 | Msa0767390:CDS | 40.0% |
| !! | GCGCTTTGGAAATGGATTAT+TGG | - | chr5_2:30438930-30438949 | Msa0767390:CDS | 40.0% |
| CATGAAGATGCTGAAAAGAG+TGG | - | chr5_2:30438998-30439017 | Msa0767390:CDS | 40.0% | |
| !!! | TTCATTCTTTTCTGAGGTCG+AGG | + | chr5_2:30439082-30439101 | None:intergenic | 40.0% |
| TGCAACGGACGAATGAAAAA+GGG | + | chr5_2:30439388-30439407 | None:intergenic | 40.0% | |
| ATGCAACGGACGAATGAAAA+AGG | + | chr5_2:30439389-30439408 | None:intergenic | 40.0% | |
| TCCATCCTACCTTGAACATA+TGG | - | chr5_2:30439408-30439427 | Msa0767390:CDS | 40.0% | |
| ACCATATGTTCAAGGTAGGA+TGG | + | chr5_2:30439412-30439431 | None:intergenic | 40.0% | |
| !! | TTGGTGATGAGGATAAGACT+TGG | - | chr5_2:30439751-30439770 | Msa0767390:CDS | 40.0% |
| AGTTATGAGTGCTCGATTAG+TGG | + | chr5_2:30439802-30439821 | None:intergenic | 40.0% | |
| AATCGAGCACTCATAACTTC+TGG | - | chr5_2:30439804-30439823 | Msa0767390:CDS | 40.0% | |
| TGGTTGGAGACAAATTGTTG+AGG | - | chr5_2:30439824-30439843 | Msa0767390:CDS | 40.0% | |
| TGATGAACAATACTCGGAGT+CGG | + | chr5_2:30438465-30438484 | None:intergenic | 40.0% | |
| CAATGTAACAGATGCTTCCT+AGG | - | chr5_2:30438687-30438706 | Msa0767390:intron | 40.0% | |
| TTGGTAGAACTAGGGTTACT+GGG | + | chr5_2:30438748-30438767 | None:intergenic | 40.0% | |
| TTTGGTAGAACTAGGGTTAC+TGG | + | chr5_2:30438749-30438768 | None:intergenic | 40.0% | |
| !! | GTAACCCTAGTTCTACCAAA+TGG | - | chr5_2:30438749-30438768 | Msa0767390:intron | 40.0% |
| TAAAACGTTACCATGACGTG+TGG | - | chr5_2:30438795-30438814 | Msa0767390:CDS | 40.0% | |
| CATGACGTGTGGTTTCAAAA+GGG | - | chr5_2:30438806-30438825 | Msa0767390:CDS | 40.0% | |
| !! | TGACAAAAGCGCTTTGGAAA+TGG | - | chr5_2:30438922-30438941 | Msa0767390:CDS | 40.0% |
| !! | GCGCTTTGGAAATGGATTAT+TGG | - | chr5_2:30438930-30438949 | Msa0767390:CDS | 40.0% |
| CATGAAGATGCTGAAAAGAG+TGG | - | chr5_2:30438998-30439017 | Msa0767390:CDS | 40.0% | |
| !!! | TTCATTCTTTTCTGAGGTCG+AGG | + | chr5_2:30439082-30439101 | None:intergenic | 40.0% |
| TGCAACGGACGAATGAAAAA+GGG | + | chr5_2:30439388-30439407 | None:intergenic | 40.0% | |
| ATGCAACGGACGAATGAAAA+AGG | + | chr5_2:30439389-30439408 | None:intergenic | 40.0% | |
| TCCATCCTACCTTGAACATA+TGG | - | chr5_2:30439408-30439427 | Msa0767390:CDS | 40.0% | |
| ACCATATGTTCAAGGTAGGA+TGG | + | chr5_2:30439412-30439431 | None:intergenic | 40.0% | |
| !! | TTGGTGATGAGGATAAGACT+TGG | - | chr5_2:30439751-30439770 | Msa0767390:CDS | 40.0% |
| AGTTATGAGTGCTCGATTAG+TGG | + | chr5_2:30439802-30439821 | None:intergenic | 40.0% | |
| AATCGAGCACTCATAACTTC+TGG | - | chr5_2:30439804-30439823 | Msa0767390:CDS | 40.0% | |
| TGGTTGGAGACAAATTGTTG+AGG | - | chr5_2:30439824-30439843 | Msa0767390:CDS | 40.0% | |
| !!! | CCTTTTGAAACCACACGTCA+TGG | + | chr5_2:30438808-30438827 | None:intergenic | 45.0% |
| CCATGACGTGTGGTTTCAAA+AGG | - | chr5_2:30438805-30438824 | Msa0767390:CDS | 45.0% | |
| ACGTGTGGTTTCAAAAGGGT+TGG | - | chr5_2:30438810-30438829 | Msa0767390:CDS | 45.0% | |
| CGTGTGGTTTCAAAAGGGTT+GGG | - | chr5_2:30438811-30438830 | Msa0767390:CDS | 45.0% | |
| !! | TCAACTTGATCTCTAGGGCT+TGG | + | chr5_2:30438962-30438981 | None:intergenic | 45.0% |
| GCAACGGACGAATGAAAAAG+GGG | + | chr5_2:30439387-30439406 | None:intergenic | 45.0% | |
| TCAAGGTAGGATGGATGCAA+CGG | + | chr5_2:30439403-30439422 | None:intergenic | 45.0% | |
| ATCCTCATCACCAAACACCA+CGG | + | chr5_2:30439745-30439764 | None:intergenic | 45.0% | |
| GAGCACTCATAACTTCTGGT+TGG | - | chr5_2:30439808-30439827 | Msa0767390:CDS | 45.0% | |
| !!! | CCTTTTGAAACCACACGTCA+TGG | + | chr5_2:30438808-30438827 | None:intergenic | 45.0% |
| CCATGACGTGTGGTTTCAAA+AGG | - | chr5_2:30438805-30438824 | Msa0767390:CDS | 45.0% | |
| ACGTGTGGTTTCAAAAGGGT+TGG | - | chr5_2:30438810-30438829 | Msa0767390:CDS | 45.0% | |
| CGTGTGGTTTCAAAAGGGTT+GGG | - | chr5_2:30438811-30438830 | Msa0767390:CDS | 45.0% | |
| !! | TCAACTTGATCTCTAGGGCT+TGG | + | chr5_2:30438962-30438981 | None:intergenic | 45.0% |
| GCAACGGACGAATGAAAAAG+GGG | + | chr5_2:30439387-30439406 | None:intergenic | 45.0% | |
| TCAAGGTAGGATGGATGCAA+CGG | + | chr5_2:30439403-30439422 | None:intergenic | 45.0% | |
| ATCCTCATCACCAAACACCA+CGG | + | chr5_2:30439745-30439764 | None:intergenic | 45.0% | |
| GAGCACTCATAACTTCTGGT+TGG | - | chr5_2:30439808-30439827 | Msa0767390:CDS | 45.0% | |
| !! | CCTTTGAGATGGACCATCAC+TGG | + | chr5_2:30439107-30439126 | None:intergenic | 50.0% |
| CCAGTGATGGTCCATCTCAA+AGG | - | chr5_2:30439104-30439123 | Msa0767390:intron | 50.0% | |
| AAAGGATGGGATTGCAACCG+TGG | - | chr5_2:30439725-30439744 | Msa0767390:CDS | 50.0% | |
| !! | AACCGTGGTGTTTGGTGATG+AGG | - | chr5_2:30439740-30439759 | Msa0767390:CDS | 50.0% |
| !! | CCTTTGAGATGGACCATCAC+TGG | + | chr5_2:30439107-30439126 | None:intergenic | 50.0% |
| CCAGTGATGGTCCATCTCAA+AGG | - | chr5_2:30439104-30439123 | Msa0767390:intron | 50.0% | |
| AAAGGATGGGATTGCAACCG+TGG | - | chr5_2:30439725-30439744 | Msa0767390:CDS | 50.0% | |
| !! | AACCGTGGTGTTTGGTGATG+AGG | - | chr5_2:30439740-30439759 | Msa0767390:CDS | 50.0% |
| GGGATTGCAACCGTGGTGTT+TGG | - | chr5_2:30439732-30439751 | Msa0767390:CDS | 55.0% | |
| CGCGGAGCTAGATTGATCAC+TGG | + | chr5_2:30439934-30439953 | None:intergenic | 55.0% | |
| ! | TCTAGCTCCGCGCACTTTCA+AGG | - | chr5_2:30439942-30439961 | Msa0767390:CDS | 55.0% |
| GGGATTGCAACCGTGGTGTT+TGG | - | chr5_2:30439732-30439751 | Msa0767390:CDS | 55.0% | |
| CGCGGAGCTAGATTGATCAC+TGG | + | chr5_2:30439934-30439953 | None:intergenic | 55.0% | |
| ! | TCTAGCTCCGCGCACTTTCA+AGG | - | chr5_2:30439942-30439961 | Msa0767390:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 30438453 | 30440261 | 30438453 | ID=Msa0767390;Name=Msa0767390 |
| chr5_2 | mRNA | 30438453 | 30440261 | 30438453 | ID=Msa0767390-mRNA-1;Parent=Msa0767390;Name=Msa0767390-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|5|0|332 |
| chr5_2 | exon | 30440166 | 30440261 | 30440166 | ID=Msa0767390-mRNA-1:exon:11509;Parent=Msa0767390-mRNA-1 |
| chr5_2 | exon | 30439602 | 30440016 | 30439602 | ID=Msa0767390-mRNA-1:exon:11508;Parent=Msa0767390-mRNA-1 |
| chr5_2 | exon | 30439285 | 30439445 | 30439285 | ID=Msa0767390-mRNA-1:exon:11507;Parent=Msa0767390-mRNA-1 |
| chr5_2 | exon | 30438751 | 30439027 | 30438751 | ID=Msa0767390-mRNA-1:exon:11506;Parent=Msa0767390-mRNA-1 |
| chr5_2 | exon | 30438453 | 30438502 | 30438453 | ID=Msa0767390-mRNA-1:exon:11505;Parent=Msa0767390-mRNA-1 |
| chr5_2 | CDS | 30440166 | 30440261 | 30440166 | ID=Msa0767390-mRNA-1:cds;Parent=Msa0767390-mRNA-1 |
| chr5_2 | CDS | 30439602 | 30440016 | 30439602 | ID=Msa0767390-mRNA-1:cds;Parent=Msa0767390-mRNA-1 |
| chr5_2 | CDS | 30439285 | 30439445 | 30439285 | ID=Msa0767390-mRNA-1:cds;Parent=Msa0767390-mRNA-1 |
| chr5_2 | CDS | 30438751 | 30439027 | 30438751 | ID=Msa0767390-mRNA-1:cds;Parent=Msa0767390-mRNA-1 |
| chr5_2 | CDS | 30438453 | 30438502 | 30438453 | ID=Msa0767390-mRNA-1:cds;Parent=Msa0767390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
