AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0770180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0770180 MtrunA17_Chr1g0198761 64.890 319 47 3 718 971 16 334 7.67e-127 407
Msa0770180 MtrunA17_Chr1g0198761 28.035 692 430 17 67 713 50 718 2.22e-68 245
Msa0770180 MtrunA17_Chr1g0198761 72.932 133 34 1 974 1106 621 751 2.77e-50 191
Msa0770180 MtrunA17_Chr5g0431001 56.740 319 74 2 717 971 30 348 2.52e-109 352
Msa0770180 MtrunA17_Chr5g0431001 30.197 457 289 11 45 482 38 483 1.19e-48 181
Msa0770180 MtrunA17_Chr5g0448761 34.549 576 363 8 61 630 57 624 7.46e-105 348
Msa0770180 MtrunA17_Chr5g0448761 25.000 240 143 6 759 964 100 336 4.05e-14 77.4
Msa0770180 MtrunA17_Chr2g0296781 33.888 661 379 17 70 690 3 645 5.23e-97 325
Msa0770180 MtrunA17_Chr2g0296781 26.415 212 115 6 790 968 63 266 9.77e-11 66.2
Msa0770180 MtrunA17_Chr1g0202341 33.506 579 372 9 56 632 43 610 2.23e-95 320
Msa0770180 MtrunA17_Chr5g0441581 32.269 595 372 11 47 632 12 584 1.58e-94 317
Msa0770180 MtrunA17_Chr8g0363841 32.190 612 393 11 53 655 5 603 5.99e-93 313
Msa0770180 MtrunA17_Chr8g0363841 26.749 243 128 8 763 968 62 291 1.69e-11 68.6
Msa0770180 MtrunA17_Chr6g0477261 35.196 537 307 12 191 690 2 534 2.24e-89 302
Msa0770180 MtrunA17_Chr2g0287651 31.624 585 375 10 70 644 81 650 9.20e-89 306
Msa0770180 MtrunA17_Chr2g0287651 26.050 238 142 5 760 966 115 349 2.63e-13 74.7
Msa0770180 MtrunA17_Chr1g0207551 32.264 592 364 13 59 637 29 596 1.26e-83 290
Msa0770180 MtrunA17_Chr1g0196541 32.026 612 381 15 69 667 2 591 2.17e-83 288
Msa0770180 MtrunA17_Chr2g0329031 31.624 585 368 15 70 649 20 577 6.20e-83 286
Msa0770180 MtrunA17_Chr5g0440451 30.808 594 361 11 66 637 45 610 2.62e-81 286
Msa0770180 MtrunA17_Chr5g0448511 35.062 405 260 3 244 648 13 414 3.23e-80 273
Msa0770180 MtrunA17_Chr2g0324011 30.167 600 400 9 55 649 1 586 1.69e-79 273
Msa0770180 MtrunA17_Chr3g0118611 35.949 395 246 4 236 630 113 500 1.19e-78 275
Msa0770180 MtrunA17_Chr1g0203051 30.939 543 357 8 79 618 94 621 1.81e-78 271
Msa0770180 MtrunA17_Chr3g0080351 29.010 586 368 10 59 630 71 622 1.91e-78 276
Msa0770180 MtrunA17_Chr6g0458391 29.947 571 361 11 66 630 227 764 1.05e-77 272
Msa0770180 MtrunA17_Chr3g0082121 31.615 582 372 12 70 648 49 607 1.23e-77 270
Msa0770180 MtrunA17_Chr2g0287061 31.419 592 329 12 62 639 181 709 2.63e-76 269
Msa0770180 MtrunA17_Chr1g0203721 27.674 589 411 8 66 650 65 642 1.07e-73 263
Msa0770180 MtrunA17_Chr2g0291581 29.721 609 390 11 65 665 72 650 8.38e-72 253
Msa0770180 MtrunA17_Chr2g0276841 41.004 239 112 1 759 968 111 349 9.36e-56 207
Msa0770180 MtrunA17_Chr2g0276841 26.261 575 396 12 66 630 72 628 1.31e-53 200
Msa0770180 MtrunA17_Chr2g0291591 26.735 490 337 8 59 543 59 531 7.15e-53 195
Msa0770180 MtrunA17_Chr2g0290391 40.000 250 111 2 758 968 89 338 7.74e-53 198
Msa0770180 MtrunA17_Chr2g0290391 25.637 589 393 14 60 628 47 610 2.64e-50 190
Msa0770180 MtrunA17_Chr2g0294841 25.970 593 371 16 66 626 47 603 2.21e-49 188
Msa0770180 MtrunA17_Chr2g0294841 39.918 243 112 3 759 968 86 327 4.79e-43 169
Msa0770180 MtrunA17_Chr1g0164591 31.373 306 202 3 156 461 10 307 6.59e-47 171
Msa0770180 MtrunA17_Chr7g0258861 33.106 293 181 5 61 347 7 290 2.16e-36 140
Msa0770180 MtrunA17_Chr5g0430921 63.529 85 31 0 1021 1105 1 85 4.61e-31 117
Msa0770180 MtrunA17_Chr3g0081281 64.000 75 27 0 861 935 1 75 5.54e-26 102
Msa0770180 MtrunA17_Chr2g0308841 26.293 232 155 5 406 630 4 226 6.08e-23 100
Msa0770180 MtrunA17_Chr1g0149131 31.818 110 75 0 348 457 1 110 2.27e-13 68.2
Msa0770180 MtrunA17_Chr4g0033611 37.037 108 57 3 66 171 78 176 2.78e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0770180 AT4G38180.1 35.233 579 365 6 61 637 70 640 3.02e-113 372
Msa0770180 AT4G38180.1 27.200 250 137 8 759 972 113 353 1.74e-13 75.9
Msa0770180 AT4G15090.1 32.582 577 370 10 59 630 46 608 1.50e-87 302
Msa0770180 AT4G15090.5 32.582 577 370 10 59 630 46 608 1.50e-87 302
Msa0770180 AT4G15090.3 32.582 577 370 10 59 630 46 608 1.50e-87 302
Msa0770180 AT4G15090.2 32.582 577 370 10 59 630 46 608 1.50e-87 302
Msa0770180 AT4G15090.4 32.582 577 370 10 59 630 46 608 1.50e-87 302
Msa0770180 AT2G27110.2 29.912 565 359 6 66 630 51 578 4.23e-83 290
Msa0770180 AT2G27110.1 29.912 565 359 6 66 630 51 578 4.23e-83 290
Msa0770180 AT2G27110.3 34.536 388 249 2 243 630 51 433 8.58e-79 274
Msa0770180 AT3G22170.2 28.596 584 368 10 62 630 68 617 2.67e-78 276
Msa0770180 AT3G22170.1 28.596 584 368 10 62 630 68 617 2.67e-78 276
Msa0770180 AT3G06250.2 30.868 622 364 14 49 661 170 734 4.66e-76 268
Msa0770180 AT3G06250.1 30.868 622 364 14 49 661 170 734 4.66e-76 268
Msa0770180 AT3G06250.3 30.868 622 364 14 49 661 170 734 4.66e-76 268
Msa0770180 AT4G38170.1 36.176 387 238 7 245 630 20 398 1.88e-73 254
Msa0770180 AT1G76320.3 29.350 569 377 12 70 635 3 549 8.76e-69 245
Msa0770180 AT1G76320.2 29.350 569 377 12 70 635 3 549 1.97e-68 245
Msa0770180 AT1G76320.1 29.350 569 377 12 70 635 3 549 2.16e-68 245
Msa0770180 AT1G76320.4 29.350 569 377 12 70 635 3 549 2.16e-68 245
Msa0770180 AT5G18960.2 28.978 597 370 11 67 661 214 758 6.51e-68 245
Msa0770180 AT5G18960.1 28.978 597 370 11 67 661 214 758 6.51e-68 245
Msa0770180 AT1G52520.1 29.027 596 372 13 65 643 86 647 3.88e-65 235
Msa0770180 AT2G32250.5 31.937 382 256 3 250 631 176 553 5.24e-64 233
Msa0770180 AT2G32250.8 31.937 382 256 3 250 631 135 512 8.01e-64 232
Msa0770180 AT2G32250.7 31.937 382 256 3 250 631 135 512 8.10e-64 232
Msa0770180 AT2G32250.6 31.937 382 256 3 250 631 176 553 9.91e-64 233
Msa0770180 AT2G32250.1 31.937 382 256 3 250 631 176 553 9.91e-64 233
Msa0770180 AT2G32250.3 31.937 382 256 3 250 631 176 553 9.91e-64 233
Msa0770180 AT4G19990.3 29.006 624 364 15 67 672 24 586 1.02e-63 232
Msa0770180 AT4G19990.4 29.006 624 364 15 67 672 24 586 1.02e-63 232
Msa0770180 AT2G32250.2 31.937 382 256 3 250 631 176 553 1.02e-63 233
Msa0770180 AT2G32250.4 31.937 382 256 3 250 631 176 553 1.02e-63 233
Msa0770180 AT4G19990.5 29.006 624 364 15 67 672 24 586 1.19e-63 231
Msa0770180 AT4G19990.7 29.006 624 364 15 67 672 38 600 1.55e-63 231
Msa0770180 AT4G19990.6 29.006 624 364 15 67 672 24 586 2.06e-63 231
Msa0770180 AT4G19990.2 29.006 624 364 15 67 672 24 586 2.06e-63 231
Msa0770180 AT4G19990.1 32.569 436 273 8 240 672 112 529 3.02e-63 229
Msa0770180 AT1G80010.1 27.711 581 393 9 65 632 96 662 5.03e-63 229
Msa0770180 AT5G28530.1 26.557 610 408 16 39 626 25 616 2.58e-52 196
Msa0770180 AT5G28530.1 40.078 257 115 3 753 970 88 344 1.10e-48 186
Msa0770180 AT1G10240.2 40.586 239 113 1 759 968 89 327 7.28e-52 195
Msa0770180 AT1G10240.2 26.325 585 385 15 66 631 50 607 1.11e-51 194
Msa0770180 AT1G10240.1 40.586 239 113 1 759 968 89 327 7.28e-52 195
Msa0770180 AT1G10240.1 26.325 585 385 15 66 631 50 607 1.11e-51 194
Msa0770180 AT5G28530.3 26.885 610 402 17 39 626 25 612 1.16e-51 194
Msa0770180 AT5G28530.3 40.078 257 115 3 753 970 88 344 1.17e-48 186
Msa0770180 AT5G28530.2 26.885 610 402 17 39 626 25 612 1.16e-51 194
Msa0770180 AT5G28530.2 40.078 257 115 3 753 970 88 344 1.17e-48 186
Msa0770180 AT5G28530.5 40.367 218 106 2 753 970 88 281 3.66e-41 162
Msa0770180 AT5G28530.5 24.000 600 369 19 39 626 25 549 1.57e-33 138
Msa0770180 AT5G28530.4 40.367 218 106 2 753 970 88 281 4.06e-41 162
Msa0770180 AT5G28530.4 23.667 600 375 18 39 626 25 553 4.07e-34 140

Find 183 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTAGTCTTTGCAAATTT+TGG 0.090976 5_2:-40349807 None:intergenic
ATAAAACAAACTTGCTTATT+AGG 0.166574 5_2:-40355243 None:intergenic
ATGACATGCCACTTGGAATA+TGG 0.178250 5_2:+40353750 Msa0770180:CDS
ATGTTAACTTGGTTGAATTT+TGG 0.201090 5_2:+40349109 Msa0770180:CDS
GCGCATTCTTGTGTGCTTTC+GGG 0.206414 5_2:+40345904 Msa0770180:CDS
ACGACGAAGATTGGAGAAAT+TGG 0.208835 5_2:-40345928 None:intergenic
TTGCTCATGTAAAATGTTTC+AGG 0.209064 5_2:+40349431 Msa0770180:CDS
ATATATTTCAACATGAATTA+TGG 0.225211 5_2:+40349274 Msa0770180:CDS
GGCGCATTCTTGTGTGCTTT+CGG 0.228046 5_2:+40345903 Msa0770180:CDS
TTCTACTTCGTCAGGAATAT+TGG 0.232123 5_2:-40349775 None:intergenic
TTTAATTCATCATCACAATT+TGG 0.253101 5_2:-40347830 None:intergenic
GTTGGTGGATGTTGATTCTA+AGG 0.272035 5_2:+40355017 Msa0770180:CDS
TTAAGTTAGAAAAGAATAAA+TGG 0.285393 5_2:+40348953 Msa0770180:CDS
TAGAACACAACCAAAGAAAA+TGG 0.288289 5_2:-40353798 None:intergenic
AGGACAGATGATTTGATTCT+TGG 0.289591 5_2:+40349750 Msa0770180:CDS
CTTTATCATCTAATAATTCA+TGG 0.292862 5_2:-40353337 None:intergenic
TACGAGGATTGTGGTACTTT+TGG 0.294933 5_2:-40354545 None:intergenic
TGAAACCACATCCCCAAATA+AGG 0.310942 5_2:-40348527 None:intergenic
AAGTTTCAAGTCATGTGTTT+GGG 0.313111 5_2:+40348876 Msa0770180:CDS
CCAAAAGGATCAAGGCTAAA+AGG 0.316490 5_2:+40355099 Msa0770180:CDS
AATAATGATGAATTGAATAT+TGG 0.316744 5_2:+40355045 Msa0770180:CDS
TTCTAAACCAAAACTATTGT+TGG 0.324685 5_2:+40349200 Msa0770180:CDS
CCACGTTCCAACAATAGTTT+TGG 0.324928 5_2:-40349207 None:intergenic
TCTTTACCATCCTTCTTATT+CGG 0.326195 5_2:-40348016 None:intergenic
AAAGTCATTCAAGTGATTAA+AGG 0.328254 5_2:+40354973 Msa0770180:CDS
AATTCAACCAAGTTAACATT+AGG 0.328343 5_2:-40349105 None:intergenic
AAATTGTGATGATGAATTAA+AGG 0.328661 5_2:+40347832 Msa0770180:CDS
AAAGTTTCAAGTCATGTGTT+TGG 0.339166 5_2:+40348875 Msa0770180:CDS
GAAACTGAGAATTCTTTCTA+TGG 0.342428 5_2:+40349069 Msa0770180:CDS
AACCGAATCATCAATTTGAT+TGG 0.345131 5_2:-40352989 None:intergenic
GCCTCAGGAGACTTTATATA+TGG 0.347513 5_2:-40346005 None:intergenic
CTTATTAAAAGAACAGTGTT+GGG 0.350765 5_2:+40348291 Msa0770180:CDS
ATTCAAAGTCTTTAAATCTC+TGG 0.356604 5_2:-40348359 None:intergenic
CTATTCACAATGTACTTACT+TGG 0.362850 5_2:-40349516 None:intergenic
CAAGTCTCTTCAAACTCATT+TGG 0.372368 5_2:-40348910 None:intergenic
TACCAACACCACTTTGAGAT+TGG 0.379261 5_2:-40353532 None:intergenic
AGGCCGGGCCGGGCTTTGTA+AGG 0.379793 5_2:+40355748 Msa0770180:CDS
TCAGGGGTAGGGGTGGAAAT+AGG 0.380796 5_2:+40355723 Msa0770180:intron
CTTTCTGTCATCAGGGGTAG+GGG 0.388178 5_2:+40355713 Msa0770180:intron
CCTTTCTGTCATCAGGGGTA+GGG 0.390140 5_2:+40355712 Msa0770180:intron
AGCCAATCAAATTGATGATT+CGG 0.398489 5_2:+40352987 Msa0770180:CDS
CCACTTTCATGGAAGGATCT+TGG 0.405094 5_2:-40348741 None:intergenic
TTAAATACCTTCCCTTCATA+AGG 0.405157 5_2:-40353012 None:intergenic
TTTGGGAAGATGGTATTTGT+AGG 0.408238 5_2:+40348494 Msa0770180:CDS
CTTAGAAACGGTCTCTTCAT+AGG 0.411850 5_2:-40348184 None:intergenic
GGAAATAGGCTAGGCCGGGC+CGG 0.413143 5_2:+40355737 Msa0770180:CDS
CTATGAAGAGACCGTTTCTA+AGG 0.416138 5_2:+40348185 Msa0770180:CDS
GGAAGGATTTCTACTTCGTC+AGG 0.426183 5_2:-40349783 None:intergenic
GAAATAGGCTAGGCCGGGCC+GGG 0.430786 5_2:+40355738 Msa0770180:CDS
TTATTCCTTATTTGGGGATG+TGG 0.431251 5_2:+40348522 Msa0770180:CDS
CAAATGAGTTTGAAGAGACT+TGG 0.432734 5_2:+40348911 Msa0770180:CDS
AAAGTGTCTTTGAAATATGT+TGG 0.433279 5_2:-40349012 None:intergenic
GGACAGATGATTTGATTCTT+GGG 0.434817 5_2:+40349751 Msa0770180:CDS
CTTAACATGGCGTTGAGACT+TGG 0.440813 5_2:+40355592 Msa0770180:CDS
TGACATGCCACTTGGAATAT+GGG 0.441367 5_2:+40353751 Msa0770180:CDS
CAAGTAAGTACATTGTGAAT+AGG 0.442114 5_2:+40349517 Msa0770180:CDS
TCTAAATCCTAATGTTAACT+TGG 0.442556 5_2:+40349098 Msa0770180:CDS
ATTGAAATGTTTCGATAAGC+AGG 0.443461 5_2:-40353374 None:intergenic
AATAGAAGCGCAACGACATA+AGG 0.451925 5_2:+40349149 Msa0770180:CDS
GAAAATAAGAAAGATGAAGA+TGG 0.456611 5_2:+40349321 Msa0770180:CDS
GTTCTTTGTTAGGAGGATGA+AGG 0.459984 5_2:+40355339 Msa0770180:intron
GGATTGCATGCGTGGATTGT+GGG 0.462406 5_2:+40349295 Msa0770180:CDS
AAATAGTTGGACGGATTTGA+AGG 0.464793 5_2:+40349711 Msa0770180:intron
ATTGCATTACCATGCGCCTT+GGG 0.466933 5_2:-40345869 None:intergenic
AAGTGTCTTTGAAATATGTT+GGG 0.467879 5_2:-40349011 None:intergenic
CGACGAAGATTGGAGAAATT+GGG 0.468419 5_2:-40345927 None:intergenic
TTGTTAGGAGGATGAAGGGT+TGG 0.468851 5_2:+40355344 Msa0770180:intron
CAGTCAGAGGATAATCCATT+AGG 0.469125 5_2:+40353128 Msa0770180:intron
ATTTGATTGGCTTGAGGCAA+AGG 0.470675 5_2:-40352976 None:intergenic
CCAAAATTTGCAAAGACTAA+AGG 0.474060 5_2:+40349807 Msa0770180:CDS
GATGATTCGGTTCCTTATGA+AGG 0.474153 5_2:+40353000 Msa0770180:CDS
ATCCAATCTCAAAGTGGTGT+TGG 0.475604 5_2:+40353530 Msa0770180:CDS
TGAATTATTAGATGATAAAG+AGG 0.477367 5_2:+40353340 Msa0770180:CDS
GGCTTAGGCCTTACAAAGCC+CGG 0.477742 5_2:-40355756 None:intergenic
TTCTTTGTTAGGAGGATGAA+GGG 0.479276 5_2:+40355340 Msa0770180:intron
AATTGCATTACCATGCGCCT+TGG 0.480068 5_2:-40345870 None:intergenic
TTAGAGAAAGAAGTAGATGC+AGG 0.483158 5_2:+40353470 Msa0770180:CDS
GCATGTAGTAGAGCAAATAT+AGG 0.483783 5_2:+40348250 Msa0770180:CDS
AAATATAACCACAATTAACT+TGG 0.486282 5_2:+40353274 Msa0770180:CDS
AAAACAAAATGTCGACCAAA+AGG 0.488122 5_2:+40355084 Msa0770180:CDS
AAAATAAGAAAGATGAAGAT+GGG 0.489609 5_2:+40349322 Msa0770180:CDS
CTGTCAAGGTTAGAAGAAGA+AGG 0.491761 5_2:+40348053 Msa0770180:CDS
CATTGTCATGTTCTAAATTG+CGG 0.496337 5_2:+40355150 Msa0770180:CDS
AGTTTGAAAGATGTAGATGA+TGG 0.498012 5_2:+40353593 Msa0770180:CDS
AGGTAATAGATTGTCGATGA+TGG 0.498326 5_2:-40348612 None:intergenic
GCCTGAAATCCAAGAAAAGT+TGG 0.500285 5_2:+40354999 Msa0770180:CDS
ACTTATTAAAAGAACAGTGT+TGG 0.504556 5_2:+40348290 Msa0770180:CDS
TAATTGTGGTGCAAAATTGT+TGG 0.507450 5_2:+40353250 Msa0770180:CDS
TGTAAAATGTTTCAGGCTGA+AGG 0.508852 5_2:+40349438 Msa0770180:CDS
CCAAGATCCTTCCATGAAAG+TGG 0.509707 5_2:+40348741 Msa0770180:CDS
TGACATAGCTGACAATGTCT+TGG 0.510088 5_2:+40349572 Msa0770180:CDS
TTCCTTGCAGACCTTAGAAA+CGG 0.510667 5_2:-40348196 None:intergenic
ACAAGAATGCGCCTAGGGCA+TGG 0.511263 5_2:-40345893 None:intergenic
CAAAGAAAATGGAATTTCCA+TGG 0.515475 5_2:-40353787 None:intergenic
AGCTACCTAAGAACCTTCTC+TGG 0.516029 5_2:-40355425 None:intergenic
GGGGTGGAAATAGGCTAGGC+CGG 0.516461 5_2:+40355732 Msa0770180:CDS
TGGTCGGTTATTATAAGAGT+TGG 0.516995 5_2:-40348721 None:intergenic
TCTATAGCCACTTTCATGGA+AGG 0.520478 5_2:-40348748 None:intergenic
GTGAAGCAAGTGGATATGTA+TGG 0.521671 5_2:-40348162 None:intergenic
TGGATTGCATGCGTGGATTG+TGG 0.521916 5_2:+40349294 Msa0770180:CDS
GGGTTATTCGCCGAATAAGA+AGG 0.524462 5_2:+40348006 Msa0770180:CDS
GTTAGAAAAGAATAAATGGT+TGG 0.524945 5_2:+40348957 Msa0770180:CDS
AATAACTTGCCTCAGAACTT+CGG 0.527391 5_2:+40345970 Msa0770180:CDS
ATGATTTCAACTTCCAGAGA+AGG 0.531372 5_2:+40355412 Msa0770180:CDS
CATCGACAATCTATTACCTT+CGG 0.531789 5_2:+40348616 Msa0770180:CDS
TAAGAAAGATGAAGATGGGA+TGG 0.532467 5_2:+40349326 Msa0770180:CDS
GATGAATTAAAGGCTACGAT+TGG 0.535839 5_2:+40347842 Msa0770180:CDS
AGAAAAGTGATTCATTCGTA+TGG 0.536168 5_2:+40348659 Msa0770180:CDS
GGTAGTGGTAAAAGAATCAA+AGG 0.539060 5_2:+40349828 Msa0770180:CDS
AATCATTATGACATGCCACT+TGG 0.540607 5_2:+40353743 Msa0770180:CDS
GAATTCATCCTCATCATACA+TGG 0.541448 5_2:-40348848 None:intergenic
AGGCCTTACAAAGCCCGGCC+CGG 0.541455 5_2:-40355751 None:intergenic
TATGATAATAGTGAGATCAA+TGG 0.545302 5_2:+40349363 Msa0770180:CDS
TGTTGGGGTTATGAAAATGT+TGG 0.545394 5_2:+40348307 Msa0770180:CDS
AGAAAATCATCTTAATAATG+AGG 0.547740 5_2:+40355367 Msa0770180:CDS
AAGAATCAAATCATCTGTCC+TGG 0.550254 5_2:-40349748 None:intergenic
AGAAGGGCTTTAACAAGAGA+AGG 0.550276 5_2:+40348070 Msa0770180:CDS
ATGATTCGGTTCCTTATGAA+GGG 0.550780 5_2:+40353001 Msa0770180:CDS
TGAATTATGGATTGCATGCG+TGG 0.559471 5_2:+40349287 Msa0770180:CDS
TGAGGCAAAGGTCCATGTTG+TGG 0.560366 5_2:-40352964 None:intergenic
CTTGTTCTCCAAGTTAATTG+TGG 0.563675 5_2:-40353282 None:intergenic
CATGGCGTTGAGACTTGGAA+TGG 0.564628 5_2:+40355597 Msa0770180:CDS
TTGGCAATGCCCAAGGCGCA+TGG 0.567273 5_2:+40345860 None:intergenic
GGGTGGAAATAGGCTAGGCC+GGG 0.567987 5_2:+40355733 Msa0770180:CDS
AATGTCGACCAAAAGGATCA+AGG 0.571436 5_2:+40355091 Msa0770180:CDS
AATTATGTTCCGAAGTTCTG+AGG 0.573422 5_2:-40345979 None:intergenic
CAATTAACTTGGAGAACAAG+TGG 0.573540 5_2:+40353285 Msa0770180:CDS
TTTGCAAAGACTAAAGGTAG+TGG 0.573810 5_2:+40349813 Msa0770180:CDS
TCATCAATTTGATTGGCTTG+AGG 0.576539 5_2:-40352982 None:intergenic
AGCACACAAGAATGCGCCTA+GGG 0.576812 5_2:-40345898 None:intergenic
TTCGGTTCCTTATGAAGGGA+AGG 0.577245 5_2:+40353005 Msa0770180:CDS
ACACAAAGTATGTGTCTACA+AGG 0.578783 5_2:-40349465 None:intergenic
TGATGGTTTATCCCGGTGAA+AGG 0.578866 5_2:-40348595 None:intergenic
TCTGTCATCAGGGGTAGGGG+TGG 0.580616 5_2:+40355716 Msa0770180:intron
TCCATGTTGTGGCTCTTGAA+AGG 0.580784 5_2:-40352953 None:intergenic
AAATGAGTTTGAAGAGACTT+GGG 0.582686 5_2:+40348912 Msa0770180:CDS
AGAGAGTTTGTTTGTCATCG+TGG 0.583722 5_2:+40353161 Msa0770180:CDS
GTAAGTACATTGTGAATAGG+TGG 0.585422 5_2:+40349520 Msa0770180:CDS
AATAGTTGGACGGATTTGAA+GGG 0.586290 5_2:+40349712 Msa0770180:intron
CTACTCATAGATTGTGCATG+TGG 0.586429 5_2:+40348788 Msa0770180:CDS
GCAAAGTGAATCTACTGTCA+AGG 0.588383 5_2:+40348039 Msa0770180:CDS
AATCAAAGGTGGCAAAGAGA+AGG 0.590018 5_2:+40349842 Msa0770180:CDS
GCAAGAGATGTGTATACTCG+TGG 0.591502 5_2:+40349243 Msa0770180:CDS
TTGTCGATGATGGTTTATCC+CGG 0.594835 5_2:-40348602 None:intergenic
AAGGGAGTTCTAAGAGAACC+AGG 0.594888 5_2:+40349730 Msa0770180:CDS
TGTCATGTTCTAAATTGCGG+TGG 0.596067 5_2:+40355153 Msa0770180:CDS
GTAATGCAATTCCATGCCCT+AGG 0.596196 5_2:+40345882 Msa0770180:CDS
TGTCAAGGTTAGAAGAAGAA+GGG 0.596214 5_2:+40348054 Msa0770180:CDS
TGTTATAAGTCCTACGCCGA+AGG 0.599087 5_2:-40348632 None:intergenic
GACCGTTTCTAAGGTCTGCA+AGG 0.602665 5_2:+40348194 Msa0770180:CDS
TTTCATGGAAGGATCTTGGT+CGG 0.605288 5_2:-40348737 None:intergenic
ACCTTTCAAGAGCCACAACA+TGG 0.606872 5_2:+40352952 Msa0770180:CDS
CAATCTATTACCTTCGGCGT+AGG 0.610128 5_2:+40348622 Msa0770180:CDS
GTATTTGATACGTTAGCAGA+AGG 0.613843 5_2:+40347869 Msa0770180:CDS
TCAGGAGACTTTATATATGG+AGG 0.618064 5_2:-40346002 None:intergenic
AAGCACACAAGAATGCGCCT+AGG 0.621491 5_2:-40345899 None:intergenic
GAGTTTGTTTGTCATCGTGG+TGG 0.621510 5_2:+40353164 Msa0770180:CDS
TGCTTATTAGGAGATTGAGA+AGG 0.626393 5_2:-40355231 None:intergenic
ACGTACTAATACGAGGATTG+TGG 0.627602 5_2:-40354554 None:intergenic
TTATTAAAAGAACAGTGTTG+GGG 0.628398 5_2:+40348292 Msa0770180:CDS
AAGTGTTCAAAGACTTAACA+TGG 0.630014 5_2:+40355579 Msa0770180:CDS
CAAGAGATGTGTATACTCGT+GGG 0.630216 5_2:+40349244 Msa0770180:CDS
TGAGACTTGGAATGGTTCAG+AGG 0.632631 5_2:+40355605 Msa0770180:CDS
GGTAGGGGTGGAAATAGGCT+AGG 0.632996 5_2:+40355728 Msa0770180:CDS
TCATACGCATAATAAAAGCA+TGG 0.634387 5_2:-40348439 None:intergenic
AAGTCATCAAGATGTAATTG+TGG 0.635877 5_2:+40353236 Msa0770180:CDS
ATGCCACTTGGAATATGGGT+TGG 0.636508 5_2:+40353755 Msa0770180:CDS
CCAAAACTATTGTTGGAACG+TGG 0.638878 5_2:+40349207 Msa0770180:CDS
CTCTTCATAGGTGAAGCAAG+TGG 0.639442 5_2:-40348172 None:intergenic
TGAAATCCAAGAAAAGTTGG+TGG 0.640176 5_2:+40355002 Msa0770180:CDS
TGTTGGAACGTGGTATCGAG+AGG 0.648329 5_2:+40349217 Msa0770180:CDS
TATTCGCCGAATAAGAAGGA+TGG 0.652167 5_2:+40348010 Msa0770180:CDS
AGTTTCAAGTCATGTGTTTG+GGG 0.653537 5_2:+40348877 Msa0770180:CDS
TGGGTTGGCATCGATAACCA+TGG 0.657469 5_2:+40353770 Msa0770180:CDS
ATGCCAACCCATATTCCAAG+TGG 0.662452 5_2:-40353758 None:intergenic
AATTAACTTGGAGAACAAGT+GGG 0.677660 5_2:+40353286 Msa0770180:CDS
GCAAGACTTTGTAAGGCATG+CGG 0.678885 5_2:+40349888 Msa0770180:CDS
TGTTTGAGATTCGAAGCACG+TGG 0.679560 5_2:+40348986 Msa0770180:CDS
GTCAAGATTAGAAATCATGA+TGG 0.680264 5_2:+40354504 Msa0770180:CDS
AGTGGTAAAAGAATCAAAGG+TGG 0.684382 5_2:+40349831 Msa0770180:CDS
AAAGGATCAAGGCTAAAAGG+AGG 0.688106 5_2:+40355102 Msa0770180:CDS
AGGTGTTTCCATGTATGATG+AGG 0.710654 5_2:+40348840 Msa0770180:CDS
GGAAAACACGTACTAATACG+AGG 0.725863 5_2:-40354561 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATAAA+AGG + chr5_2:40346842-40346861 Msa0770180:intron 0.0%
!! ATATATATATATATATATAT+AGG + chr5_2:40346815-40346834 Msa0770180:intron 0.0%
!! ATTAATCAATAAAGTTAATT+GGG - chr5_2:40346512-40346531 None:intergenic 10.0%
!! AATTAATCAATAAAGTTAAT+TGG - chr5_2:40346513-40346532 None:intergenic 10.0%
!!! AATAATTTCTATTATTTTAG+AGG + chr5_2:40346538-40346557 Msa0770180:intron 10.0%
!! AATAATTTCTGTTAAAAATA+AGG + chr5_2:40346562-40346581 Msa0770180:intron 10.0%
!! TATATATATGTATATGTATA+GGG - chr5_2:40352083-40352102 None:intergenic 10.0%
!! ATATATATATGTATATGTAT+AGG - chr5_2:40352084-40352103 None:intergenic 10.0%
!!! TCATATATTAAATGATTTTT+AGG + chr5_2:40354342-40354361 Msa0770180:intron 10.0%
!! GGAAAACATAATAAATAAAA+GGG - chr5_2:40347753-40347772 None:intergenic 15.0%
!! AGGAAAACATAATAAATAAA+AGG - chr5_2:40347754-40347773 None:intergenic 15.0%
!! TCTTCAATAAAATAATAGAA+AGG - chr5_2:40347774-40347793 None:intergenic 15.0%
!! TTAAGTTAGAAAAGAATAAA+TGG + chr5_2:40348953-40348972 Msa0770180:CDS 15.0%
!! ATATATTTCAACATGAATTA+TGG + chr5_2:40349274-40349293 Msa0770180:CDS 15.0%
!!! AAAATAAGTACATTTTGAAA+GGG - chr5_2:40349980-40349999 None:intergenic 15.0%
!!! TAAAATAAGTACATTTTGAA+AGG - chr5_2:40349981-40350000 None:intergenic 15.0%
!!! GTTAATTTTGACATAAAAAT+AGG - chr5_2:40350413-40350432 None:intergenic 15.0%
!!! TGTTTTATTATCAAATTTTC+AGG - chr5_2:40351566-40351585 None:intergenic 15.0%
!!! ATTAAGGTATTGAATTAAAT+TGG + chr5_2:40351640-40351659 Msa0770180:intron 15.0%
!!! TTAAGGTATTGAATTAAATT+GGG + chr5_2:40351641-40351660 Msa0770180:intron 15.0%
!! ATATATATGTATATGTATAG+GGG - chr5_2:40352082-40352101 None:intergenic 15.0%
!! TTATATAATATATGTAGAGT+CGG + chr5_2:40352185-40352204 Msa0770180:intron 15.0%
!! AAAATTAAACAAATCATTAC+TGG - chr5_2:40352808-40352827 None:intergenic 15.0%
!! AATAATGATGAATTGAATAT+TGG + chr5_2:40355045-40355064 Msa0770180:CDS 15.0%
!! AGAACAATTGCTTATTATTT+CGG - chr5_2:40346201-40346220 None:intergenic 20.0%
!! AACTAATTATAATATACCTG+AGG - chr5_2:40347183-40347202 None:intergenic 20.0%
!! CAGGTATATTATAATTAGTT+TGG + chr5_2:40347183-40347202 Msa0770180:intron 20.0%
!!! TTTTGTTCCTATTTTTTTGT+TGG + chr5_2:40347270-40347289 Msa0770180:intron 20.0%
!! TTTAATTCATCATCACAATT+TGG - chr5_2:40347833-40347852 None:intergenic 20.0%
!!! AAATTGTGATGATGAATTAA+AGG + chr5_2:40347832-40347851 Msa0770180:CDS 20.0%
!!! TCATCGATTATAGATAAAAA+CGG + chr5_2:40347947-40347966 Msa0770180:CDS 20.0%
!!! TTTTGATAGATTACTTTAGA+AGG + chr5_2:40348401-40348420 Msa0770180:CDS 20.0%
!! AGGAAAAATTATTCCTTATT+TGG + chr5_2:40348514-40348533 Msa0770180:CDS 20.0%
!!! GGAAAAATTATTCCTTATTT+GGG + chr5_2:40348515-40348534 Msa0770180:CDS 20.0%
!!! GAAAAATTATTCCTTATTTG+GGG + chr5_2:40348516-40348535 Msa0770180:CDS 20.0%
!!! AAAAAAGTTTCTGAAAAAGT+AGG + chr5_2:40348820-40348839 Msa0770180:CDS 20.0%
!! AAAATAAGAAAGATGAAGAT+GGG + chr5_2:40349322-40349341 Msa0770180:CDS 20.0%
!!! TATTTTTACTTGATGTTGTT+AGG + chr5_2:40350053-40350072 Msa0770180:intron 20.0%
!! AAAATCATATCAAAAAGAAC+AGG - chr5_2:40350157-40350176 None:intergenic 20.0%
!!! TTTGTATCAGTAACTTATTT+TGG + chr5_2:40350270-40350289 Msa0770180:intron 20.0%
!!! TTTGTATCAGTAACTTATTT+TGG + chr5_2:40350270-40350289 Msa0770180:intron 20.0%
!!! ACAGAAATTTCATTTAGAAT+AGG - chr5_2:40351232-40351251 None:intergenic 20.0%
!! AGAACAATATGTGAAAAATT+GGG + chr5_2:40351585-40351604 Msa0770180:intron 20.0%
!! TGAATTAAATTGGGAAAAAA+TGG + chr5_2:40351650-40351669 Msa0770180:intron 20.0%
!! GAAAAAATGGATCAAAATTA+GGG + chr5_2:40351663-40351682 Msa0770180:intron 20.0%
!! TATATAATATATGTAGAGTC+GGG + chr5_2:40352186-40352205 Msa0770180:intron 20.0%
!!! AAAAGTATACAAAACCAAAA+GGG - chr5_2:40352658-40352677 None:intergenic 20.0%
!!! AAAAAGTATACAAAACCAAA+AGG - chr5_2:40352659-40352678 None:intergenic 20.0%
!! TTAGTAGTTGCTATATTATT+TGG + chr5_2:40352709-40352728 Msa0770180:intron 20.0%
!!! AATATGTTTTCTTCTCTTTT+TGG + chr5_2:40352762-40352781 Msa0770180:intron 20.0%
!!! ATATGTTTTCTTCTCTTTTT+GGG + chr5_2:40352763-40352782 Msa0770180:intron 20.0%
!! TGAGATAATTATATCTATTG+AGG + chr5_2:40352852-40352871 Msa0770180:intron 20.0%
!! GAGATAATTATATCTATTGA+GGG + chr5_2:40352853-40352872 Msa0770180:intron 20.0%
!! AAATATAACCACAATTAACT+TGG + chr5_2:40353274-40353293 Msa0770180:CDS 20.0%
!! CTTTATCATCTAATAATTCA+TGG - chr5_2:40353340-40353359 None:intergenic 20.0%
!! TGAATTATTAGATGATAAAG+AGG + chr5_2:40353340-40353359 Msa0770180:CDS 20.0%
!! GAACATATTATTTGATCATT+TGG + chr5_2:40353656-40353675 Msa0770180:intron 20.0%
!! GTCATAATGATTTATTCTAT+AGG - chr5_2:40353735-40353754 None:intergenic 20.0%
!!! AATTTTCTTAGTTTTGTCAA+AGG + chr5_2:40353954-40353973 Msa0770180:intron 20.0%
!! TAATTAATATATAGTTGTGC+AGG + chr5_2:40354470-40354489 Msa0770180:intron 20.0%
!! TTAGTTATCTACAAAATATG+CGG + chr5_2:40354642-40354661 Msa0770180:intron 20.0%
!!! TTAATCATGTGATTAGATTT+TGG - chr5_2:40354847-40354866 None:intergenic 20.0%
!!! AATTTCTAGACATTGAATTA+AGG - chr5_2:40354902-40354921 None:intergenic 20.0%
!!! ATAAAACAAACTTGCTTATT+AGG - chr5_2:40355246-40355265 None:intergenic 20.0%
!!! TTTTATTCTTGTTCTTTGTT+AGG + chr5_2:40355329-40355348 Msa0770180:intron 20.0%
!! AGAAAATCATCTTAATAATG+AGG + chr5_2:40355367-40355386 Msa0770180:CDS 20.0%
!! TTCAAATGTTTTATATGTGC+CGG + chr5_2:40346072-40346091 Msa0770180:intron 25.0%
! GAACAATTGCTTATTATTTC+GGG - chr5_2:40346200-40346219 None:intergenic 25.0%
!!! AATAGATTTTAGCAGCAAAA+AGG - chr5_2:40346233-40346252 None:intergenic 25.0%
! ATGATTAAGAAAGTTGACAT+AGG - chr5_2:40346402-40346421 None:intergenic 25.0%
! AAAAATAAGGTAATCAGAAC+CGG + chr5_2:40346575-40346594 Msa0770180:intron 25.0%
! ACAAAAAACAACTATCTCTT+AGG - chr5_2:40347256-40347275 None:intergenic 25.0%
! AGTAGAACCAACAAAAAAAT+AGG - chr5_2:40347280-40347299 None:intergenic 25.0%
!!! TCCTAGTTTTTTTCTTAGTT+TGG + chr5_2:40347393-40347412 Msa0770180:intron 25.0%
! ACCAAACTAAGAAAAAAACT+AGG - chr5_2:40347397-40347416 None:intergenic 25.0%
!! TTGTTTCATCCTTTTTCTTT+AGG + chr5_2:40347548-40347567 Msa0770180:intron 25.0%
!! TGTTTCATCCTTTTTCTTTA+GGG + chr5_2:40347549-40347568 Msa0770180:intron 25.0%
! GTTAAGAAATCAAATGTAGA+AGG - chr5_2:40347701-40347720 None:intergenic 25.0%
!!! TATTTTGTTTTCTCGAAAGA+GGG + chr5_2:40347986-40348005 Msa0770180:CDS 25.0%
!!! ATGCAAATGTTGTTTTCAAA+TGG + chr5_2:40348098-40348117 Msa0770180:CDS 25.0%
!!! AAATGTTGTTTTCAAATGGA+TGG + chr5_2:40348102-40348121 Msa0770180:CDS 25.0%
!!! AATGTTGTTTTCAAATGGAT+GGG + chr5_2:40348103-40348122 Msa0770180:CDS 25.0%
!! AACACTGTTCTTTTAATAAG+TGG - chr5_2:40348291-40348310 None:intergenic 25.0%
! ACTTATTAAAAGAACAGTGT+TGG + chr5_2:40348290-40348309 Msa0770180:CDS 25.0%
! CTTATTAAAAGAACAGTGTT+GGG + chr5_2:40348291-40348310 Msa0770180:CDS 25.0%
! TTATTAAAAGAACAGTGTTG+GGG + chr5_2:40348292-40348311 Msa0770180:CDS 25.0%
! ATTCAAAGTCTTTAAATCTC+TGG - chr5_2:40348362-40348381 None:intergenic 25.0%
!! ATGGTTGTTTGAAAAGTTTT+TGG + chr5_2:40348678-40348697 Msa0770180:CDS 25.0%
! GTTAGAAAAGAATAAATGGT+TGG + chr5_2:40348957-40348976 Msa0770180:CDS 25.0%
!!! AAGTGTCTTTGAAATATGTT+GGG - chr5_2:40349014-40349033 None:intergenic 25.0%
!!! AAAGTGTCTTTGAAATATGT+TGG - chr5_2:40349015-40349034 None:intergenic 25.0%
!! ATATTTCAAAGACACTTTTC+TGG + chr5_2:40349017-40349036 Msa0770180:CDS 25.0%
! TCTAAATCCTAATGTTAACT+TGG + chr5_2:40349098-40349117 Msa0770180:CDS 25.0%
! AATTCAACCAAGTTAACATT+AGG - chr5_2:40349108-40349127 None:intergenic 25.0%
!!! ATGTTAACTTGGTTGAATTT+TGG + chr5_2:40349109-40349128 Msa0770180:CDS 25.0%
! TTCTAAACCAAAACTATTGT+TGG + chr5_2:40349200-40349219 Msa0770180:CDS 25.0%
! GAAAATAAGAAAGATGAAGA+TGG + chr5_2:40349321-40349340 Msa0770180:CDS 25.0%
! TATGATAATAGTGAGATCAA+TGG + chr5_2:40349363-40349382 Msa0770180:CDS 25.0%
!!! ACACATACTTTGTGTTTTAA+AGG + chr5_2:40349473-40349492 Msa0770180:CDS 25.0%
!!! CACATACTTTGTGTTTTAAA+GGG + chr5_2:40349474-40349493 Msa0770180:CDS 25.0%
! AAATTGCTTCTTGTGTTAAA+TGG + chr5_2:40349672-40349691 Msa0770180:intron 25.0%
! AATTGCTTCTTGTGTTAAAT+GGG + chr5_2:40349673-40349692 Msa0770180:intron 25.0%
! TGTTAACATGGAAAAATAGT+TGG + chr5_2:40349698-40349717 Msa0770180:intron 25.0%
! AAAAAAAGCAAGACTTTGTA+AGG + chr5_2:40349881-40349900 Msa0770180:CDS 25.0%
! ATAATAATAGGAGTAGTACT+TGG - chr5_2:40350356-40350375 None:intergenic 25.0%
! AAGTACTACTCCTATTATTA+TGG + chr5_2:40350355-40350374 Msa0770180:intron 25.0%
! TTTATGAGATGCATAAAAGT+AGG - chr5_2:40350385-40350404 None:intergenic 25.0%
!!! AACAACATTTTAGTGTGTTT+TGG + chr5_2:40350444-40350463 Msa0770180:intron 25.0%
! TGATAGTTATGTATCAGTAT+TGG + chr5_2:40350705-40350724 Msa0770180:intron 25.0%
!! TTTTGAATTCATGTGGATTT+AGG - chr5_2:40351421-40351440 None:intergenic 25.0%
!!! AACTACTTTTTGAATTCATG+TGG - chr5_2:40351428-40351447 None:intergenic 25.0%
!!! TTCAGGTTTGATTTTTGTTT+GGG - chr5_2:40351549-40351568 None:intergenic 25.0%
!!! TTTCAGGTTTGATTTTTGTT+TGG - chr5_2:40351550-40351569 None:intergenic 25.0%
! CAGAACAATATGTGAAAAAT+TGG + chr5_2:40351584-40351603 Msa0770180:intron 25.0%
! GAACAATATGTGAAAAATTG+GGG + chr5_2:40351586-40351605 Msa0770180:intron 25.0%
!! ATTGGGGTATCAAATTAAAT+TGG + chr5_2:40351602-40351621 Msa0770180:intron 25.0%
!! TTGGGGTATCAAATTAAATT+GGG + chr5_2:40351603-40351622 Msa0770180:intron 25.0%
! GGAAAAAATGGATCAAAATT+AGG + chr5_2:40351662-40351681 Msa0770180:intron 25.0%
! AAAGTTCACAAGAACAATAT+AGG + chr5_2:40351738-40351757 Msa0770180:intron 25.0%
!!! TTCTTTCTGAAACGTTAATA+TGG - chr5_2:40351809-40351828 None:intergenic 25.0%
!!! TATATGAGGTTTGTTACAAT+AGG + chr5_2:40352316-40352335 Msa0770180:intron 25.0%
! GCATTTGTATCCAAATAAAA+AGG - chr5_2:40352381-40352400 None:intergenic 25.0%
! CTTCTTGTATAATCTAGAAA+GGG - chr5_2:40352740-40352759 None:intergenic 25.0%
! ACTTCTTGTATAATCTAGAA+AGG - chr5_2:40352741-40352760 None:intergenic 25.0%
!! TCTCTTTTATAAATGCCTAA+TGG - chr5_2:40353146-40353165 None:intergenic 25.0%
! TCTACACAAAAATAATGAAG+TGG + chr5_2:40353196-40353215 Msa0770180:CDS 25.0%
! CTATTATCTTTCTCCAAAAA+TGG - chr5_2:40353503-40353522 None:intergenic 25.0%
!!! CATTTTTGGAGAAAGATAAT+AGG + chr5_2:40353501-40353520 Msa0770180:CDS 25.0%
!! AATTTTATCCAATCTCAAAG+TGG + chr5_2:40353524-40353543 Msa0770180:CDS 25.0%
! AATAGATGAGAATAACAAGT+TGG + chr5_2:40353634-40353653 Msa0770180:intron 25.0%
!!! AGAAGATTTCTACTTTTACA+TGG + chr5_2:40353831-40353850 Msa0770180:CDS 25.0%
!!! GAAGATTTCTACTTTTACAT+GGG + chr5_2:40353832-40353851 Msa0770180:CDS 25.0%
!! TGATTATACCATTTAGAATG+TGG + chr5_2:40354151-40354170 Msa0770180:intron 25.0%
!! TGCAAGGAATTTGAATTTTA+TGG + chr5_2:40354769-40354788 Msa0770180:intron 25.0%
!! GCAAGGAATTTGAATTTTAT+GGG + chr5_2:40354770-40354789 Msa0770180:intron 25.0%
! AATCACATGATTAACAACAA+TGG + chr5_2:40354853-40354872 Msa0770180:intron 25.0%
!! TTTTCGGTATTTTGTCTTTA+AGG - chr5_2:40354929-40354948 None:intergenic 25.0%
! AAAGTCATTCAAGTGATTAA+AGG + chr5_2:40354973-40354992 Msa0770180:CDS 25.0%
!!! CATTTTGTTTTTGAAGGTAA+AGG - chr5_2:40355075-40355094 None:intergenic 25.0%
!!! AAGCAAGTTTGTTTTATTTG+AGG + chr5_2:40355249-40355268 Msa0770180:intron 25.0%
!!! ATCTTATGTTTTGTTCAATC+AGG + chr5_2:40355450-40355469 Msa0770180:intron 25.0%
!!! TCTTATGTTTTGTTCAATCA+GGG + chr5_2:40355451-40355470 Msa0770180:intron 25.0%
!!! TACAATGGTTGTTTGTTTTA+GGG + chr5_2:40355673-40355692 Msa0770180:intron 25.0%
ACTAAGAATGAAGATTCAAG+AGG - chr5_2:40346030-40346049 None:intergenic 30.0%
TGAAGAATTGTCAAGACTTT+GGG - chr5_2:40346056-40346075 None:intergenic 30.0%
TTGAAGAATTGTCAAGACTT+TGG - chr5_2:40346057-40346076 None:intergenic 30.0%
!! GAAACATAGCAATTTTAAGG+GGG - chr5_2:40346130-40346149 None:intergenic 30.0%
! CGAAACATAGCAATTTTAAG+GGG - chr5_2:40346131-40346150 None:intergenic 30.0%
! CCGAAACATAGCAATTTTAA+GGG - chr5_2:40346132-40346151 None:intergenic 30.0%
CCCTTAAAATTGCTATGTTT+CGG + chr5_2:40346129-40346148 Msa0770180:intron 30.0%
CCTTAAAATTGCTATGTTTC+GGG + chr5_2:40346130-40346149 Msa0770180:intron 30.0%
CACGATTGGTAAATATCATA+TGG + chr5_2:40346458-40346477 Msa0770180:intron 30.0%
AAAAGGATGTTTCAAATGAG+AGG + chr5_2:40346859-40346878 Msa0770180:intron 30.0%
AAAGGATGTTTCAAATGAGA+GGG + chr5_2:40346860-40346879 Msa0770180:intron 30.0%
! AGAGGGATTTTTAAATGAGA+GGG + chr5_2:40346877-40346896 Msa0770180:intron 30.0%
TCATGCAAAATATGAGAGAA+AGG - chr5_2:40347008-40347027 None:intergenic 30.0%
TTCAAACTGATGTATTTGGT+TGG - chr5_2:40347083-40347102 None:intergenic 30.0%
CCAATTCAAACTGATGTATT+TGG - chr5_2:40347087-40347106 None:intergenic 30.0%
CCAAATACATCAGTTTGAAT+TGG + chr5_2:40347084-40347103 Msa0770180:intron 30.0%
!! ACTTGTTTTTCAAATTCCTC+AGG + chr5_2:40347164-40347183 Msa0770180:intron 30.0%
TAACAAGACCCTAAAGAAAA+AGG - chr5_2:40347560-40347579 None:intergenic 30.0%
! CAAATGTAGAAGGTTTTTCT+TGG - chr5_2:40347691-40347710 None:intergenic 30.0%
!!! GTATTTTGTTTTCTCGAAAG+AGG + chr5_2:40347985-40348004 Msa0770180:CDS 30.0%
TCTTTACCATCCTTCTTATT+CGG - chr5_2:40348019-40348038 None:intergenic 30.0%
!!! ATGTTGTTTTCAAATGGATG+GGG + chr5_2:40348104-40348123 Msa0770180:CDS 30.0%
TCATACGCATAATAAAAGCA+TGG - chr5_2:40348442-40348461 None:intergenic 30.0%
! ATGCTTTTATTATGCGTATG+AGG + chr5_2:40348441-40348460 Msa0770180:CDS 30.0%
! TTTTATTATGCGTATGAGGT+AGG + chr5_2:40348445-40348464 Msa0770180:CDS 30.0%
AGAAAAGTGATTCATTCGTA+TGG + chr5_2:40348659-40348678 Msa0770180:CDS 30.0%
!! TGAAAAGTTTTTGGAAGCAA+TGG + chr5_2:40348687-40348706 Msa0770180:CDS 30.0%
!! GAAAAGTTTTTGGAAGCAAT+GGG + chr5_2:40348688-40348707 Msa0770180:CDS 30.0%
!! ATTTTCTATAGCCACTTTCA+TGG - chr5_2:40348755-40348774 None:intergenic 30.0%
! AAAGTTTCAAGTCATGTGTT+TGG + chr5_2:40348875-40348894 Msa0770180:CDS 30.0%
! AAGTTTCAAGTCATGTGTTT+GGG + chr5_2:40348876-40348895 Msa0770180:CDS 30.0%
AAATGAGTTTGAAGAGACTT+GGG + chr5_2:40348912-40348931 Msa0770180:CDS 30.0%
GAAACTGAGAATTCTTTCTA+TGG + chr5_2:40349069-40349088 Msa0770180:CDS 30.0%
TTGCTCATGTAAAATGTTTC+AGG + chr5_2:40349431-40349450 Msa0770180:CDS 30.0%
CTATTCACAATGTACTTACT+TGG - chr5_2:40349519-40349538 None:intergenic 30.0%
CAAGTAAGTACATTGTGAAT+AGG + chr5_2:40349517-40349536 Msa0770180:CDS 30.0%
TTGTCAGCTATGTCAAAAAT+AGG - chr5_2:40349567-40349586 None:intergenic 30.0%
ATTGCTTCTTGTGTTAAATG+GGG + chr5_2:40349674-40349693 Msa0770180:intron 30.0%
AACATGGAAAAATAGTTGGA+CGG + chr5_2:40349702-40349721 Msa0770180:intron 30.0%
!! TTAGTCTTTGCAAATTTTGG+TGG - chr5_2:40349807-40349826 None:intergenic 30.0%
!! CCTTTAGTCTTTGCAAATTT+TGG - chr5_2:40349810-40349829 None:intergenic 30.0%
CCAAAATTTGCAAAGACTAA+AGG + chr5_2:40349807-40349826 Msa0770180:CDS 30.0%
AATTATGGAGATGATCTTTG+GGG - chr5_2:40349945-40349964 None:intergenic 30.0%
CAATTATGGAGATGATCTTT+GGG - chr5_2:40349946-40349965 None:intergenic 30.0%
AAAGATCATCTCCATAATTG+CGG + chr5_2:40349946-40349965 Msa0770180:intron 30.0%
! TCTTTTTGTGCTCATGTTTA+TGG + chr5_2:40350002-40350021 Msa0770180:intron 30.0%
TTACTTGATGTTGTTAGGAT+TGG + chr5_2:40350058-40350077 Msa0770180:intron 30.0%
GAATGACATAGAAGAATGAA+TGG + chr5_2:40350126-40350145 Msa0770180:intron 30.0%
AGTAGGCAAACCATAATAAT+AGG - chr5_2:40350368-40350387 None:intergenic 30.0%
!! AACATTTTAGTGTGTTTTGG+TGG + chr5_2:40350447-40350466 Msa0770180:intron 30.0%
!!! TGTATTTGTTTTGCCAACTT+TGG + chr5_2:40350603-40350622 Msa0770180:intron 30.0%
TATCTAACAACAAGTGCAAA+AGG - chr5_2:40350645-40350664 None:intergenic 30.0%
! TGTACATAAGTTTGAAACTG+CGG - chr5_2:40350816-40350835 None:intergenic 30.0%
AATCCAGTAACACTCATTAA+TGG - chr5_2:40350905-40350924 None:intergenic 30.0%
! AATGAGTGTTACTGGATTTA+AGG + chr5_2:40350907-40350926 Msa0770180:intron 30.0%
! ATGAGTGTTACTGGATTTAA+GGG + chr5_2:40350908-40350927 Msa0770180:intron 30.0%
ATTACTTGATATCATCACAC+TGG + chr5_2:40350932-40350951 Msa0770180:intron 30.0%
TTACTAGCTAACAGACATAA+AGG - chr5_2:40351339-40351358 None:intergenic 30.0%
! ATTTTCAGTGGATAAGATGA+TGG - chr5_2:40351394-40351413 None:intergenic 30.0%
!! GATTTAGGTTCAATTTTCAG+TGG - chr5_2:40351406-40351425 None:intergenic 30.0%
AATTGGAAAGGAACTTTGAT+TGG - chr5_2:40351497-40351516 None:intergenic 30.0%
! CTTTAGAAGGAAAATTGGAA+AGG - chr5_2:40351509-40351528 None:intergenic 30.0%
! GTTCACTTTAGAAGGAAAAT+TGG - chr5_2:40351514-40351533 None:intergenic 30.0%
GGAAGAAGTGAATCAAATTA+AGG + chr5_2:40351624-40351643 Msa0770180:intron 30.0%
TCAAAATTAGGGTTTGAATC+AGG + chr5_2:40351674-40351693 Msa0770180:intron 30.0%
! TGTTTCTGTTATTAACAGGT+GGG - chr5_2:40351709-40351728 None:intergenic 30.0%
!! TTGTTTCTGTTATTAACAGG+TGG - chr5_2:40351710-40351729 None:intergenic 30.0%
!! CTGTTGTTTCTGTTATTAAC+AGG - chr5_2:40351713-40351732 None:intergenic 30.0%
GAGGTTTAAAGAAAGAAAGA+AGG + chr5_2:40351844-40351863 Msa0770180:intron 30.0%
! AGAGGGATTTTTAAATGAGA+GGG - chr5_2:40346877-40346896 None:intergenic 30.0%
ATTTAGATCAAGTAGTCTAG+TGG - chr5_2:40352262-40352281 None:intergenic 30.0%
GTATCCAAATAAAAAGGTGA+TGG - chr5_2:40352375-40352394 None:intergenic 30.0%
!!! ATGCCCATGATTTTGTTTTT+TGG + chr5_2:40352397-40352416 Msa0770180:intron 30.0%
GGTCCAAAAAACAAAATCAT+GGG - chr5_2:40352403-40352422 None:intergenic 30.0%
TGGTCCAAAAAACAAAATCA+TGG - chr5_2:40352404-40352423 None:intergenic 30.0%
! TTTTGTCCTTCAGTTTAGAT+TGG - chr5_2:40352424-40352443 None:intergenic 30.0%
ATCTAAACTGAAGGACAAAA+AGG + chr5_2:40352424-40352443 Msa0770180:intron 30.0%
GATGCAAAGTTGAAAAACAT+CGG - chr5_2:40352574-40352593 None:intergenic 30.0%
! ACCAAATACTAACCTTTTCT+TGG - chr5_2:40352631-40352650 None:intergenic 30.0%
! TTCTTCTTCTTTCTTTTGCA+TGG + chr5_2:40352686-40352705 Msa0770180:intron 30.0%
! AGCCAATCAAATTGATGATT+CGG + chr5_2:40352987-40353006 Msa0770180:CDS 30.0%
AACCGAATCATCAATTTGAT+TGG - chr5_2:40352992-40353011 None:intergenic 30.0%
TTAAATACCTTCCCTTCATA+AGG - chr5_2:40353015-40353034 None:intergenic 30.0%
ATCTATTATACAACAGTCAG+AGG + chr5_2:40353115-40353134 Msa0770180:intron 30.0%
CACAAAAATAATGAAGTGGA+AGG + chr5_2:40353200-40353219 Msa0770180:CDS 30.0%
AAGTCATCAAGATGTAATTG+TGG + chr5_2:40353236-40353255 Msa0770180:CDS 30.0%
TAATTGTGGTGCAAAATTGT+TGG + chr5_2:40353250-40353269 Msa0770180:CDS 30.0%
! AATTAACTTGGAGAACAAGT+GGG + chr5_2:40353286-40353305 Msa0770180:CDS 30.0%
ATTGAAATGTTTCGATAAGC+AGG - chr5_2:40353377-40353396 None:intergenic 30.0%
!! ATTCTTTTGTTGTCAAAAGC+TGG + chr5_2:40353413-40353432 Msa0770180:CDS 30.0%
AGTTTGAAAGATGTAGATGA+TGG + chr5_2:40353593-40353612 Msa0770180:CDS 30.0%
CAAAGAAAATGGAATTTCCA+TGG - chr5_2:40353790-40353809 None:intergenic 30.0%
! CATGGAAATTCCATTTTCTT+TGG + chr5_2:40353788-40353807 Msa0770180:CDS 30.0%
TAGAACACAACCAAAGAAAA+TGG - chr5_2:40353801-40353820 None:intergenic 30.0%
!! TACTTTTACATGGGCTATAA+AGG + chr5_2:40353841-40353860 Msa0770180:CDS 30.0%
! GGTATGTTTCTAATTCTTTG+TGG + chr5_2:40353862-40353881 Msa0770180:intron 30.0%
TGATCTGTTAGAATTGTTTG+AGG - chr5_2:40353987-40354006 None:intergenic 30.0%
AATGAAAGAAGCTATTGCAA+TGG + chr5_2:40354016-40354035 Msa0770180:intron 30.0%
! CAAAATGCATGTTTTGTGTT+TGG - chr5_2:40354047-40354066 None:intergenic 30.0%
! CAAAACATGCATTTTGCATA+TGG + chr5_2:40354051-40354070 Msa0770180:intron 30.0%
!! CTTGGTTTTCATTTCCATTA+CGG + chr5_2:40354096-40354115 Msa0770180:intron 30.0%
AATCATCTCCACATTCTAAA+TGG - chr5_2:40354162-40354181 None:intergenic 30.0%
TCTCTTCACTTCATCAATAT+TGG + chr5_2:40354248-40354267 Msa0770180:intron 30.0%
!!! GAAGGACTTTTTTTTTTTGC+TGG + chr5_2:40354285-40354304 Msa0770180:intron 30.0%
! TTTTTCTCTAGTAAGATGCT+TGG + chr5_2:40354424-40354443 Msa0770180:intron 30.0%
TAATATATAGTTGTGCAGGT+TGG + chr5_2:40354474-40354493 Msa0770180:intron 30.0%
AATATATAGTTGTGCAGGTT+GGG + chr5_2:40354475-40354494 Msa0770180:intron 30.0%
GTCAAGATTAGAAATCATGA+TGG + chr5_2:40354504-40354523 Msa0770180:CDS 30.0%
CTTGTATCCAACTTAAAAAG+CGG - chr5_2:40354726-40354745 None:intergenic 30.0%
CAAATTCCTTGCAATAACAA+TGG - chr5_2:40354762-40354781 None:intergenic 30.0%
TTGAAGACAAAAGAGTTCAT+TGG + chr5_2:40354819-40354838 Msa0770180:intron 30.0%
TAAGGACCTAAACTTAACAA+GGG - chr5_2:40354884-40354903 None:intergenic 30.0%
TTAAGGACCTAAACTTAACA+AGG - chr5_2:40354885-40354904 None:intergenic 30.0%
AAAACAAAATGTCGACCAAA+AGG + chr5_2:40355084-40355103 Msa0770180:CDS 30.0%
! CATTGTCATGTTCTAAATTG+CGG + chr5_2:40355150-40355169 Msa0770180:CDS 30.0%
TATTCTTGTTCTTTGTTAGG+AGG + chr5_2:40355332-40355351 Msa0770180:intron 30.0%
AAACACTACTGAAACAATAC+TGG - chr5_2:40355511-40355530 None:intergenic 30.0%
AAGTGTTCAAAGACTTAACA+TGG + chr5_2:40355579-40355598 Msa0770180:CDS 30.0%
!! CTACAATGGTTGTTTGTTTT+AGG + chr5_2:40355672-40355691 Msa0770180:intron 30.0%
!!! ACAATGGTTGTTTGTTTTAG+GGG + chr5_2:40355674-40355693 Msa0770180:intron 30.0%
! AATAACTTGCCTCAGAACTT+CGG + chr5_2:40345970-40345989 Msa0770180:CDS 35.0%
AATTATGTTCCGAAGTTCTG+AGG - chr5_2:40345982-40346001 None:intergenic 35.0%
TCAGGAGACTTTATATATGG+AGG - chr5_2:40346005-40346024 None:intergenic 35.0%
TCCATATATAAAGTCTCCTG+AGG + chr5_2:40346004-40346023 Msa0770180:intron 35.0%
! CCCGAAACATAGCAATTTTA+AGG - chr5_2:40346133-40346152 None:intergenic 35.0%
! TGGTTTGGACAAACCTAAAT+TGG - chr5_2:40346319-40346338 None:intergenic 35.0%
! TCCAAGGTATCAAGCTTATT+CGG + chr5_2:40346340-40346359 Msa0770180:intron 35.0%
TAATCATGCGTTAGTTGTTG+AGG + chr5_2:40346415-40346434 Msa0770180:intron 35.0%
TATCATATGGTTTCACGAGA+TGG + chr5_2:40346471-40346490 Msa0770180:intron 35.0%
! GAGAGGGATTTTTAAATGAG+AGG + chr5_2:40346876-40346895 Msa0770180:intron 35.0%
! TTTTTAAATGAGAGGGTGAG+AGG + chr5_2:40346884-40346903 Msa0770180:intron 35.0%
AAACTGATGTATTTGGTTGG+AGG - chr5_2:40347080-40347099 None:intergenic 35.0%
GTTATGTTCATCATTCTCCA+TGG + chr5_2:40347127-40347146 Msa0770180:intron 35.0%
! AGTTGATGTATCTTTGTCCA+TGG - chr5_2:40347147-40347166 None:intergenic 35.0%
ATTTCTTAACTTATGCCCCA+AGG + chr5_2:40347711-40347730 Msa0770180:intron 35.0%
TTTCTTAACTTATGCCCCAA+GGG + chr5_2:40347712-40347731 Msa0770180:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - chr5_2:40347730-40347749 None:intergenic 35.0%
GATGAATTAAAGGCTACGAT+TGG + chr5_2:40347842-40347861 Msa0770180:CDS 35.0%
GTATTTGATACGTTAGCAGA+AGG + chr5_2:40347869-40347888 Msa0770180:CDS 35.0%
TGTCAAGGTTAGAAGAAGAA+GGG + chr5_2:40348054-40348073 Msa0770180:CDS 35.0%
!!! TGTTGTTTTCAAATGGATGG+GGG + chr5_2:40348105-40348124 Msa0770180:CDS 35.0%
GCATGTAGTAGAGCAAATAT+AGG + chr5_2:40348250-40348269 Msa0770180:CDS 35.0%
TGTTGGGGTTATGAAAATGT+TGG + chr5_2:40348307-40348326 Msa0770180:CDS 35.0%
CCCAAAAAACATGCTTCAAT+CGG - chr5_2:40348480-40348499 None:intergenic 35.0%
!!! CCGATTGAAGCATGTTTTTT+GGG + chr5_2:40348477-40348496 Msa0770180:CDS 35.0%
!!! AAGCATGTTTTTTGGGAAGA+TGG + chr5_2:40348484-40348503 Msa0770180:CDS 35.0%
TTTGGGAAGATGGTATTTGT+AGG + chr5_2:40348494-40348513 Msa0770180:CDS 35.0%
! TTATTCCTTATTTGGGGATG+TGG + chr5_2:40348522-40348541 Msa0770180:CDS 35.0%
! TTGATTTTTGCACCTTTCAC+CGG + chr5_2:40348583-40348602 Msa0770180:CDS 35.0%
AGGTAATAGATTGTCGATGA+TGG - chr5_2:40348615-40348634 None:intergenic 35.0%
CATCGACAATCTATTACCTT+CGG + chr5_2:40348616-40348635 Msa0770180:CDS 35.0%
TGGTCGGTTATTATAAGAGT+TGG - chr5_2:40348724-40348743 None:intergenic 35.0%
GAATTCATCCTCATCATACA+TGG - chr5_2:40348851-40348870 None:intergenic 35.0%
! AGTTTCAAGTCATGTGTTTG+GGG + chr5_2:40348877-40348896 Msa0770180:CDS 35.0%
CAAGTCTCTTCAAACTCATT+TGG - chr5_2:40348913-40348932 None:intergenic 35.0%
CAAATGAGTTTGAAGAGACT+TGG + chr5_2:40348911-40348930 Msa0770180:CDS 35.0%
TAAGAAAGATGAAGATGGGA+TGG + chr5_2:40349326-40349345 Msa0770180:CDS 35.0%
TGTAAAATGTTTCAGGCTGA+AGG + chr5_2:40349438-40349457 Msa0770180:CDS 35.0%
ACACAAAGTATGTGTCTACA+AGG - chr5_2:40349468-40349487 None:intergenic 35.0%
GTAAGTACATTGTGAATAGG+TGG + chr5_2:40349520-40349539 Msa0770180:CDS 35.0%
! AAATAGTTGGACGGATTTGA+AGG + chr5_2:40349711-40349730 Msa0770180:intron 35.0%
! AATAGTTGGACGGATTTGAA+GGG + chr5_2:40349712-40349731 Msa0770180:intron 35.0%
AAGAATCAAATCATCTGTCC+TGG - chr5_2:40349751-40349770 None:intergenic 35.0%
AGGACAGATGATTTGATTCT+TGG + chr5_2:40349750-40349769 Msa0770180:CDS 35.0%
GGACAGATGATTTGATTCTT+GGG + chr5_2:40349751-40349770 Msa0770180:CDS 35.0%
TTCTACTTCGTCAGGAATAT+TGG - chr5_2:40349778-40349797 None:intergenic 35.0%
!! TCTTTGCAAATTTTGGTGGA+AGG - chr5_2:40349803-40349822 None:intergenic 35.0%
TTTGCAAAGACTAAAGGTAG+TGG + chr5_2:40349813-40349832 Msa0770180:CDS 35.0%
! GGTAGTGGTAAAAGAATCAA+AGG + chr5_2:40349828-40349847 Msa0770180:CDS 35.0%
AGTGGTAAAAGAATCAAAGG+TGG + chr5_2:40349831-40349850 Msa0770180:CDS 35.0%
GCAATTATGGAGATGATCTT+TGG - chr5_2:40349947-40349966 None:intergenic 35.0%
TGTTGTTAGGATTGGAAGAA+TGG + chr5_2:40350066-40350085 Msa0770180:intron 35.0%
ATTTCAGTTTGTGATCATGC+TGG + chr5_2:40350242-40350261 Msa0770180:intron 35.0%
! AGCAGTTGTATTTTGTTCTC+AGG + chr5_2:40350544-40350563 Msa0770180:intron 35.0%
! GCAGTTGTATTTTGTTCTCA+GGG + chr5_2:40350545-40350564 Msa0770180:intron 35.0%
AAACAAATACACCACTTGCA+AGG - chr5_2:40350594-40350613 None:intergenic 35.0%
AGATTACAAAGAGCCAAAGT+TGG - chr5_2:40350619-40350638 None:intergenic 35.0%
!! ACTTTGGCTCTTTGTAATCT+TGG + chr5_2:40350619-40350638 Msa0770180:intron 35.0%
TAGCCATTAATGAGTGTTAC+TGG + chr5_2:40350899-40350918 Msa0770180:intron 35.0%
ACATTCACTTCTTGGTTACT+TGG - chr5_2:40351074-40351093 None:intergenic 35.0%
TCAAAGCAACATTCACTTCT+TGG - chr5_2:40351082-40351101 None:intergenic 35.0%
!! TGAATGTTGCTTTGAACTCA+TGG + chr5_2:40351087-40351106 Msa0770180:intron 35.0%
TCACTTAGGTTCACTTTAGA+AGG - chr5_2:40351522-40351541 None:intergenic 35.0%
TTTGTTTGGGTGAATCACTT+AGG - chr5_2:40351536-40351555 None:intergenic 35.0%
AAATTGGAGAGAAGAGAGAA+AGG + chr5_2:40351915-40351934 Msa0770180:intron 35.0%
CATCCATCTATCTAATCCAA+TGG + chr5_2:40352002-40352021 Msa0770180:intron 35.0%
! TTTTTAAATGAGAGGGTGAG+AGG - chr5_2:40346884-40346903 None:intergenic 35.0%
! GAGAGGGATTTTTAAATGAG+AGG - chr5_2:40346876-40346895 None:intergenic 35.0%
AGACCTTCATGAAAATGAGT+GGG - chr5_2:40352342-40352361 None:intergenic 35.0%
TAGACCTTCATGAAAATGAG+TGG - chr5_2:40352343-40352362 None:intergenic 35.0%
! GCAACCATCACCTTTTTATT+TGG + chr5_2:40352368-40352387 Msa0770180:intron 35.0%
TTTGGACCAATCTAAACTGA+AGG + chr5_2:40352415-40352434 Msa0770180:intron 35.0%
CCAAAAGACAGAGAGAATAA+AGG - chr5_2:40352534-40352553 None:intergenic 35.0%
! CCTTTATTCTCTCTGTCTTT+TGG + chr5_2:40352531-40352550 Msa0770180:intron 35.0%
GCCAAGAAAAGGTTAGTATT+TGG + chr5_2:40352627-40352646 Msa0770180:intron 35.0%
!! AGTATTTGGTTTCTCCCTTT+TGG + chr5_2:40352641-40352660 Msa0770180:intron 35.0%
!! TCATCAATTTGATTGGCTTG+AGG - chr5_2:40352985-40353004 None:intergenic 35.0%
!! ATGATTCGGTTCCTTATGAA+GGG + chr5_2:40353001-40353020 Msa0770180:CDS 35.0%
GGTATTTAACAGTGATGAAG+AGG + chr5_2:40353026-40353045 Msa0770180:intron 35.0%
CTTGTTCTCCAAGTTAATTG+TGG - chr5_2:40353285-40353304 None:intergenic 35.0%
! CAATTAACTTGGAGAACAAG+TGG + chr5_2:40353285-40353304 Msa0770180:CDS 35.0%
TTAGAGAAAGAAGTAGATGC+AGG + chr5_2:40353470-40353489 Msa0770180:CDS 35.0%
! TGCAGGAAATCTACCATTTT+TGG + chr5_2:40353487-40353506 Msa0770180:CDS 35.0%
AAATGCTTCATATGCTCGAA+TGG - chr5_2:40353687-40353706 None:intergenic 35.0%
! ATTCGAGCATATGAAGCATT+TGG + chr5_2:40353686-40353705 Msa0770180:intron 35.0%
! ATATGAAGCATTTGGAGATG+TGG + chr5_2:40353694-40353713 Msa0770180:intron 35.0%
AATCATTATGACATGCCACT+TGG + chr5_2:40353743-40353762 Msa0770180:CDS 35.0%
TCCTAGCAAAGTTATCAACT+TGG + chr5_2:40354078-40354097 Msa0770180:intron 35.0%
!! ACCAAGTTGATAACTTTGCT+AGG - chr5_2:40354082-40354101 None:intergenic 35.0%
TCATTATATCTCGACCGTAA+TGG - chr5_2:40354113-40354132 None:intergenic 35.0%
! AATGTGGAGATGATTTTGAG+AGG + chr5_2:40354167-40354186 Msa0770180:intron 35.0%
!! ATGTGGAGATGATTTTGAGA+GGG + chr5_2:40354168-40354187 Msa0770180:intron 35.0%
!! AGATGATTTTGAGAGGGAAT+GGG + chr5_2:40354174-40354193 Msa0770180:intron 35.0%
ACTTCATCAATATTGGACAC+TGG + chr5_2:40354255-40354274 Msa0770180:intron 35.0%
ATATATAGTTGTGCAGGTTG+GGG + chr5_2:40354476-40354495 Msa0770180:intron 35.0%
GAGGATTGTAAGAATAGATG+CGG - chr5_2:40354601-40354620 None:intergenic 35.0%
CTCATGTAGAATCAACTTAG+AGG - chr5_2:40354620-40354639 None:intergenic 35.0%
! ATCAGTCCATTGTTATTGCA+AGG + chr5_2:40354753-40354772 Msa0770180:intron 35.0%
CACATGATTAACAACAATGG+TGG + chr5_2:40354856-40354875 Msa0770180:intron 35.0%
!! CTTTAGTTGCAGCTTGTTTT+CGG - chr5_2:40354945-40354964 None:intergenic 35.0%
! ACCAACTTTTCTTGGATTTC+AGG - chr5_2:40355003-40355022 None:intergenic 35.0%
TGAAATCCAAGAAAAGTTGG+TGG + chr5_2:40355002-40355021 Msa0770180:CDS 35.0%
!!! GGTCGACATTTTGTTTTTGA+AGG - chr5_2:40355081-40355100 None:intergenic 35.0%
TGCTTATTAGGAGATTGAGA+AGG - chr5_2:40355234-40355253 None:intergenic 35.0%
TTCTTTGTTAGGAGGATGAA+GGG + chr5_2:40355340-40355359 Msa0770180:intron 35.0%
ATGATTTCAACTTCCAGAGA+AGG + chr5_2:40355412-40355431 Msa0770180:CDS 35.0%
TAGAACATAAGCTGGAACAT+TGG - chr5_2:40355536-40355555 None:intergenic 35.0%
AACACTACTAGAACATAAGC+TGG - chr5_2:40355544-40355563 None:intergenic 35.0%
!! GTTGTTTGTTGTTGCTACAA+TGG + chr5_2:40355658-40355677 Msa0770180:intron 35.0%
! GTTTTTCCTTTCTGTCATCA+GGG + chr5_2:40355706-40355725 Msa0770180:intron 35.0%
! TTTTTCCTTTCTGTCATCAG+GGG + chr5_2:40355707-40355726 Msa0770180:intron 35.0%
CGACGAAGATTGGAGAAATT+GGG - chr5_2:40345930-40345949 None:intergenic 40.0%
ACGACGAAGATTGGAGAAAT+TGG - chr5_2:40345931-40345950 None:intergenic 40.0%
!!! CTCCAATCTTCGTCGTTTTT+AGG + chr5_2:40345935-40345954 Msa0770180:CDS 40.0%
GACCTAAAAACGACGAAGAT+TGG - chr5_2:40345940-40345959 None:intergenic 40.0%
GCCTCAGGAGACTTTATATA+TGG - chr5_2:40346008-40346027 None:intergenic 40.0%
AGCACATATTGCGCCAATTT+AGG + chr5_2:40346303-40346322 Msa0770180:intron 40.0%
ATAAGCTTGATACCTTGGAG+TGG - chr5_2:40346339-40346358 None:intergenic 40.0%
CGTGCAACACATTATCTCTT+AGG - chr5_2:40346442-40346461 None:intergenic 40.0%
GAGATAATGTGTTGCACGAT+TGG + chr5_2:40346444-40346463 Msa0770180:intron 40.0%
GTTTCACGAGATGGTATTTC+AGG + chr5_2:40346480-40346499 Msa0770180:intron 40.0%
!! AAGCATGTTGGTTCGATGAT+TGG - chr5_2:40346602-40346621 None:intergenic 40.0%
! CTTATGAGTTCGAGGTGTTA+AGG + chr5_2:40346619-40346638 Msa0770180:intron 40.0%
AGGGTGAGAGGATTAAATAG+TGG + chr5_2:40346896-40346915 Msa0770180:intron 40.0%
GAGGATTAAATAGTGGCCAT+AGG + chr5_2:40346903-40346922 Msa0770180:intron 40.0%
TGGCCATAGGATTAGATAGA+TGG + chr5_2:40346916-40346935 Msa0770180:intron 40.0%
CAGCCATCTATCTAATCCTA+TGG - chr5_2:40346922-40346941 None:intergenic 40.0%
GGTCAGTAATGAGAAGAACA+TGG - chr5_2:40347035-40347054 None:intergenic 40.0%
CAACAACCAAATAGAACCAC+GGG - chr5_2:40347308-40347327 None:intergenic 40.0%
CCAACAACCAAATAGAACCA+CGG - chr5_2:40347309-40347328 None:intergenic 40.0%
AACCACCTAAGATTACTGCA+GGG - chr5_2:40347454-40347473 None:intergenic 40.0%
AAACCACCTAAGATTACTGC+AGG - chr5_2:40347455-40347474 None:intergenic 40.0%
!! TCTTGTTAACTTGTGCCCTT+AGG + chr5_2:40347572-40347591 Msa0770180:intron 40.0%
!! CTTGTTAACTTGTGCCCTTA+GGG + chr5_2:40347573-40347592 Msa0770180:intron 40.0%
!! CTTCTTAACTTGTGCCCTAA+GGG - chr5_2:40347590-40347609 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG - chr5_2:40347729-40347748 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr5_2:40347731-40347750 None:intergenic 40.0%
GAAAAATACGCACTCTCTGT+CGG + chr5_2:40347905-40347924 Msa0770180:CDS 40.0%
TATTCGCCGAATAAGAAGGA+TGG + chr5_2:40348010-40348029 Msa0770180:CDS 40.0%
GCAAAGTGAATCTACTGTCA+AGG + chr5_2:40348039-40348058 Msa0770180:CDS 40.0%
CTGTCAAGGTTAGAAGAAGA+AGG + chr5_2:40348053-40348072 Msa0770180:CDS 40.0%
! AGAAGGGCTTTAACAAGAGA+AGG + chr5_2:40348070-40348089 Msa0770180:CDS 40.0%
GTGAAGCAAGTGGATATGTA+TGG - chr5_2:40348165-40348184 None:intergenic 40.0%
CTTAGAAACGGTCTCTTCAT+AGG - chr5_2:40348187-40348206 None:intergenic 40.0%
CTATGAAGAGACCGTTTCTA+AGG + chr5_2:40348185-40348204 Msa0770180:CDS 40.0%
TTCCTTGCAGACCTTAGAAA+CGG - chr5_2:40348199-40348218 None:intergenic 40.0%
!!! GCCGATTGAAGCATGTTTTT+TGG + chr5_2:40348476-40348495 Msa0770180:CDS 40.0%
TGAAACCACATCCCCAAATA+AGG - chr5_2:40348530-40348549 None:intergenic 40.0%
! TGATTTTTGCACCTTTCACC+GGG + chr5_2:40348584-40348603 Msa0770180:CDS 40.0%
! TTGTCGATGATGGTTTATCC+CGG - chr5_2:40348605-40348624 None:intergenic 40.0%
!! AAGTTTTTGGAAGCAATGGG+CGG + chr5_2:40348691-40348710 Msa0770180:CDS 40.0%
TTTCATGGAAGGATCTTGGT+CGG - chr5_2:40348740-40348759 None:intergenic 40.0%
! TCTATAGCCACTTTCATGGA+AGG - chr5_2:40348751-40348770 None:intergenic 40.0%
CTACTCATAGATTGTGCATG+TGG + chr5_2:40348788-40348807 Msa0770180:CDS 40.0%
AGGTGTTTCCATGTATGATG+AGG + chr5_2:40348840-40348859 Msa0770180:CDS 40.0%
!! TTCAAAGACACTTTTCTGGC+AGG + chr5_2:40349021-40349040 Msa0770180:CDS 40.0%
!! TCAAAGACACTTTTCTGGCA+GGG + chr5_2:40349022-40349041 Msa0770180:CDS 40.0%
! AATAGAAGCGCAACGACATA+AGG + chr5_2:40349149-40349168 Msa0770180:CDS 40.0%
! CCACGTTCCAACAATAGTTT+TGG - chr5_2:40349210-40349229 None:intergenic 40.0%
CCAAAACTATTGTTGGAACG+TGG + chr5_2:40349207-40349226 Msa0770180:CDS 40.0%
CAAGAGATGTGTATACTCGT+GGG + chr5_2:40349244-40349263 Msa0770180:CDS 40.0%
! TGAATTATGGATTGCATGCG+TGG + chr5_2:40349287-40349306 Msa0770180:CDS 40.0%
TGACATAGCTGACAATGTCT+TGG + chr5_2:40349572-40349591 Msa0770180:CDS 40.0%
GCAAACTCATTTCTGATGTG+TGG + chr5_2:40349604-40349623 Msa0770180:intron 40.0%
GTTAAATGGGGCTGTTAACA+TGG + chr5_2:40349686-40349705 Msa0770180:intron 40.0%
AATCAAAGGTGGCAAAGAGA+AGG + chr5_2:40349842-40349861 Msa0770180:CDS 40.0%
! ATGATCTTTGGGGACAATTG+CGG - chr5_2:40349935-40349954 None:intergenic 40.0%
GGGATTTCTTACCGCAATTA+TGG - chr5_2:40349960-40349979 None:intergenic 40.0%
TGGAAGAATGGCATAGAAGA+AGG + chr5_2:40350078-40350097 Msa0770180:intron 40.0%
ATGGCATAGAAGAAGGATGA+AGG + chr5_2:40350085-40350104 Msa0770180:intron 40.0%
!! GTTCAGTTTTGTGATCATGC+TGG + chr5_2:40350180-40350199 Msa0770180:intron 40.0%
! GCTGACAATTTTGTTCAGCA+GGG + chr5_2:40350469-40350488 Msa0770180:intron 40.0%
CTGGTATATATGCTCTATGC+AGG + chr5_2:40350951-40350970 Msa0770180:intron 40.0%
ACAGACATAAAGGTCAAGCA+TGG - chr5_2:40351329-40351348 None:intergenic 40.0%
!! AAATGGATTGGATGTGCTTG+TGG - chr5_2:40351362-40351381 None:intergenic 40.0%
TGGCAATGTGAGAAATGGAT+TGG - chr5_2:40351374-40351393 None:intergenic 40.0%
! GATGATGGCAATGTGAGAAA+TGG - chr5_2:40351379-40351398 None:intergenic 40.0%
! AAGAACAATATAGGCATCGC+CGG + chr5_2:40351747-40351766 Msa0770180:intron 40.0%
AGAAAGAAGAGAGAACGATG+AGG + chr5_2:40351825-40351844 Msa0770180:intron 40.0%
! TGGCCATTGGATTAGATAGA+TGG - chr5_2:40352008-40352027 None:intergenic 40.0%
GAGGATTAAATAGTGGCCAT+TGG - chr5_2:40346903-40346922 None:intergenic 40.0%
AGGGTGAGAGGATTAAATAG+TGG - chr5_2:40346896-40346915 None:intergenic 40.0%
AGGGGATGTTTCAAATGAGA+GGG - chr5_2:40352064-40352083 None:intergenic 40.0%
TAGGGGATGTTTCAAATGAG+AGG - chr5_2:40352065-40352084 None:intergenic 40.0%
GAGAAGCTAGAAAGAGAAGA+GGG - chr5_2:40352512-40352531 None:intergenic 40.0%
TGAAATCGCATGCCAAGAAA+AGG + chr5_2:40352616-40352635 Msa0770180:intron 40.0%
!! ATTTGATTGGCTTGAGGCAA+AGG - chr5_2:40352979-40352998 None:intergenic 40.0%
!! GATGATTCGGTTCCTTATGA+AGG + chr5_2:40353000-40353019 Msa0770180:CDS 40.0%
CAGTCAGAGGATAATCCATT+AGG + chr5_2:40353128-40353147 Msa0770180:intron 40.0%
! AGAGAGTTTGTTTGTCATCG+TGG + chr5_2:40353161-40353180 Msa0770180:CDS 40.0%
ATCCAATCTCAAAGTGGTGT+TGG + chr5_2:40353530-40353549 Msa0770180:CDS 40.0%
!! TACCAACACCACTTTGAGAT+TGG - chr5_2:40353535-40353554 None:intergenic 40.0%
! ATGACATGCCACTTGGAATA+TGG + chr5_2:40353750-40353769 Msa0770180:CDS 40.0%
! TGACATGCCACTTGGAATAT+GGG + chr5_2:40353751-40353770 Msa0770180:CDS 40.0%
!! GAGATGATTTTGAGAGGGAA+TGG + chr5_2:40354173-40354192 Msa0770180:intron 40.0%
! GAATTGATGGTCGAGCAATT+TGG + chr5_2:40354196-40354215 Msa0770180:intron 40.0%
CGAGCAATTTGGTATTAGCA+TGG + chr5_2:40354207-40354226 Msa0770180:intron 40.0%
GTGAAGAGAGCAACTCAATA+TGG - chr5_2:40354237-40354256 None:intergenic 40.0%
!! TTGGACACTGGCTTATTTGA+AGG + chr5_2:40354267-40354286 Msa0770180:intron 40.0%
TTTGCTGGAATGACAACAAC+TGG + chr5_2:40354300-40354319 Msa0770180:intron 40.0%
! TACGAGGATTGTGGTACTTT+TGG - chr5_2:40354548-40354567 None:intergenic 40.0%
ACGTACTAATACGAGGATTG+TGG - chr5_2:40354557-40354576 None:intergenic 40.0%
GGAAAACACGTACTAATACG+AGG - chr5_2:40354564-40354583 None:intergenic 40.0%
CGACATCATACCAAAAGTGA+TGG + chr5_2:40354697-40354716 Msa0770180:intron 40.0%
CATCATACCAAAAGTGATGG+AGG + chr5_2:40354700-40354719 Msa0770180:intron 40.0%
GCCTGAAATCCAAGAAAAGT+TGG + chr5_2:40354999-40355018 Msa0770180:CDS 40.0%
! CAACATCCACCAACTTTTCT+TGG - chr5_2:40355011-40355030 None:intergenic 40.0%
!! GTTGGTGGATGTTGATTCTA+AGG + chr5_2:40355017-40355036 Msa0770180:CDS 40.0%
AATGTCGACCAAAAGGATCA+AGG + chr5_2:40355091-40355110 Msa0770180:CDS 40.0%
!!! CCTTTTAGCCTTGATCCTTT+TGG - chr5_2:40355102-40355121 None:intergenic 40.0%
CCAAAAGGATCAAGGCTAAA+AGG + chr5_2:40355099-40355118 Msa0770180:CDS 40.0%
AAAGGATCAAGGCTAAAAGG+AGG + chr5_2:40355102-40355121 Msa0770180:CDS 40.0%
! TGTCATGTTCTAAATTGCGG+TGG + chr5_2:40355153-40355172 Msa0770180:CDS 40.0%
GTTCTTTGTTAGGAGGATGA+AGG + chr5_2:40355339-40355358 Msa0770180:intron 40.0%
AACTTCCAGAGAAGGTTCTT+AGG + chr5_2:40355420-40355439 Msa0770180:intron 40.0%
GAACACTTCTGCAACATTGT+TGG - chr5_2:40355567-40355586 None:intergenic 40.0%
ACAACAAACAACAGCAGCAA+AGG - chr5_2:40355650-40355669 None:intergenic 40.0%
! CGTTTTTCCTTTCTGTCATC+AGG + chr5_2:40355705-40355724 Msa0770180:intron 40.0%
ATTGCATTACCATGCGCCTT+GGG - chr5_2:40345872-40345891 None:intergenic 45.0%
AATTGCATTACCATGCGCCT+TGG - chr5_2:40345873-40345892 None:intergenic 45.0%
GTAATGCAATTCCATGCCCT+AGG + chr5_2:40345882-40345901 Msa0770180:CDS 45.0%
ATGAAGATTCAAGAGGCCTC+AGG - chr5_2:40346023-40346042 None:intergenic 45.0%
! CGCAATATGTGCTTGATGAC+AGG - chr5_2:40346296-40346315 None:intergenic 45.0%
CTTGATACCTTGGAGTGGTT+TGG - chr5_2:40346334-40346353 None:intergenic 45.0%
GCCGAATAAGCTTGATACCT+TGG - chr5_2:40346344-40346363 None:intergenic 45.0%
TGACATAGGCCAAAGACACA+TGG - chr5_2:40346388-40346407 None:intergenic 45.0%
!! TGTTGGTTCGATGATTGGTC+CGG - chr5_2:40346597-40346616 None:intergenic 45.0%
CCTCGAACTCATAAGCATGT+TGG - chr5_2:40346614-40346633 None:intergenic 45.0%
CCAACATGCTTATGAGTTCG+AGG + chr5_2:40346611-40346630 Msa0770180:intron 45.0%
! CCGTGGTTCTATTTGGTTGT+TGG + chr5_2:40347306-40347325 Msa0770180:intron 45.0%
AGAAGCCCTGCAGTAATCTT+AGG + chr5_2:40347446-40347465 Msa0770180:intron 45.0%
!! GCTTCTTAACTTGTGCCCTA+AGG - chr5_2:40347591-40347610 None:intergenic 45.0%
ATAAAAACGGCGTGAAGCGT+TGG + chr5_2:40347960-40347979 Msa0770180:CDS 45.0%
GGGTTATTCGCCGAATAAGA+AGG + chr5_2:40348006-40348025 Msa0770180:CDS 45.0%
! GTTTTCAAATGGATGGGGGA+AGG + chr5_2:40348109-40348128 Msa0770180:CDS 45.0%
CTCTTCATAGGTGAAGCAAG+TGG - chr5_2:40348175-40348194 None:intergenic 45.0%
TGATGGTTTATCCCGGTGAA+AGG - chr5_2:40348598-40348617 None:intergenic 45.0%
CAATCTATTACCTTCGGCGT+AGG + chr5_2:40348622-40348641 Msa0770180:CDS 45.0%
TGTTATAAGTCCTACGCCGA+AGG - chr5_2:40348635-40348654 None:intergenic 45.0%
CCACTTTCATGGAAGGATCT+TGG - chr5_2:40348744-40348763 None:intergenic 45.0%
CCAAGATCCTTCCATGAAAG+TGG + chr5_2:40348741-40348760 Msa0770180:CDS 45.0%
!! CTTGGGCGTTTTTGATGACA+AGG + chr5_2:40348929-40348948 Msa0770180:CDS 45.0%
! TGTTTGAGATTCGAAGCACG+TGG + chr5_2:40348986-40349005 Msa0770180:CDS 45.0%
GCAAGAGATGTGTATACTCG+TGG + chr5_2:40349243-40349262 Msa0770180:CDS 45.0%
TCTCGACACAGCTATGTAAG+TGG - chr5_2:40349632-40349651 None:intergenic 45.0%
CTTACATAGCTGTGTCGAGA+AGG + chr5_2:40349632-40349651 Msa0770180:intron 45.0%
CGAGAAGGCTGGAAAAGATA+AGG + chr5_2:40349647-40349666 Msa0770180:intron 45.0%
!! AAGGGAGTTCTAAGAGAACC+AGG + chr5_2:40349730-40349749 Msa0770180:CDS 45.0%
GGAAGGATTTCTACTTCGTC+AGG - chr5_2:40349786-40349805 None:intergenic 45.0%
GCAAGACTTTGTAAGGCATG+CGG + chr5_2:40349888-40349907 Msa0770180:CDS 45.0%
! GGCTGACAATTTTGTTCAGC+AGG + chr5_2:40350468-40350487 Msa0770180:intron 45.0%
ATAGCACAGCTGCTGATCAA+TGG - chr5_2:40350508-40350527 None:intergenic 45.0%
CGACAACCAGTACTCAAATC+CGG - chr5_2:40351769-40351788 None:intergenic 45.0%
ACTGGTTGTCGAGATATCGT+CGG + chr5_2:40351778-40351797 Msa0770180:intron 45.0%
GCAAAGCGCGTTTCAGAAAT+TGG + chr5_2:40351899-40351918 Msa0770180:intron 45.0%
! AGGCCCACTCATTTTCATGA+AGG + chr5_2:40352336-40352355 Msa0770180:intron 45.0%
GGAGATACACGAATCGTAAG+TGG - chr5_2:40352491-40352510 None:intergenic 45.0%
GGAGAAGCTAGAAAGAGAAG+AGG - chr5_2:40352513-40352532 None:intergenic 45.0%
CACGTGAAATTGAGCAGCAA+AGG - chr5_2:40352598-40352617 None:intergenic 45.0%
GAGTGTGTTCATGAGCTTCT+TGG + chr5_2:40352883-40352902 Msa0770180:intron 45.0%
ACCTTTCAAGAGCCACAACA+TGG + chr5_2:40352952-40352971 Msa0770180:CDS 45.0%
TCCATGTTGTGGCTCTTGAA+AGG - chr5_2:40352956-40352975 None:intergenic 45.0%
TTCGGTTCCTTATGAAGGGA+AGG + chr5_2:40353005-40353024 Msa0770180:CDS 45.0%
! GAGTTTGTTTGTCATCGTGG+TGG + chr5_2:40353164-40353183 Msa0770180:CDS 45.0%
! ATGCCACTTGGAATATGGGT+TGG + chr5_2:40353755-40353774 Msa0770180:CDS 45.0%
ATGCCAACCCATATTCCAAG+TGG - chr5_2:40353761-40353780 None:intergenic 45.0%
TGAGAGGGAATGGGAATTGA+TGG + chr5_2:40354183-40354202 Msa0770180:intron 45.0%
AATGACAACAACTGGACGCT+CGG + chr5_2:40354308-40354327 Msa0770180:intron 45.0%
GATGCGGCATGTTTCTCAAT+AGG - chr5_2:40354585-40354604 None:intergenic 45.0%
!!! ATGGAGGCCGCTTTTTAAGT+TGG + chr5_2:40354716-40354735 Msa0770180:intron 45.0%
GTGGCTCCCTTGTTAAGTTT+AGG + chr5_2:40354875-40354894 Msa0770180:intron 45.0%
TTGTTAGGAGGATGAAGGGT+TGG + chr5_2:40355344-40355363 Msa0770180:intron 45.0%
AGCTACCTAAGAACCTTCTC+TGG - chr5_2:40355428-40355447 None:intergenic 45.0%
! CTTAACATGGCGTTGAGACT+TGG + chr5_2:40355592-40355611 Msa0770180:CDS 45.0%
TGAGACTTGGAATGGTTCAG+AGG + chr5_2:40355605-40355624 Msa0770180:CDS 45.0%
ACTTGGAATGGTTCAGAGGT+GGG + chr5_2:40355609-40355628 Msa0770180:intron 45.0%
!!! ATATTTATTTTGTTAATTTT+AGG + chr5_2:40347793-40347812 Msa0770180:intron 5.0%
!! TATATATATATATATATATG+AGG + chr5_2:40352302-40352321 Msa0770180:intron 5.0%
AGCACACAAGAATGCGCCTA+GGG - chr5_2:40345901-40345920 None:intergenic 50.0%
AAGCACACAAGAATGCGCCT+AGG - chr5_2:40345902-40345921 None:intergenic 50.0%
GGCGCATTCTTGTGTGCTTT+CGG + chr5_2:40345903-40345922 Msa0770180:CDS 50.0%
GCGCATTCTTGTGTGCTTTC+GGG + chr5_2:40345904-40345923 Msa0770180:CDS 50.0%
CACGAAGAAATCACGCAAGC+CGG - chr5_2:40346094-40346113 None:intergenic 50.0%
GGTTTGTCCAAACCACTCCA+AGG + chr5_2:40346324-40346343 Msa0770180:intron 50.0%
AACCCGACACCATGTGTCTT+TGG + chr5_2:40346376-40346395 Msa0770180:intron 50.0%
AGGCCAAAGACACATGGTGT+CGG - chr5_2:40346382-40346401 None:intergenic 50.0%
AGGAACGCGCGTTCAGAAAT+TGG - chr5_2:40346988-40347007 None:intergenic 50.0%
GAAGTGAGAGGGAAGTGAGA+AGG - chr5_2:40347056-40347075 None:intergenic 50.0%
TGGTTGGAGGTGAAGTGAGA+GGG - chr5_2:40347067-40347086 None:intergenic 50.0%
TTGGTTGGAGGTGAAGTGAG+AGG - chr5_2:40347068-40347087 None:intergenic 50.0%
! TGCTGTCCCGTGGTTCTATT+TGG + chr5_2:40347299-40347318 Msa0770180:intron 50.0%
AGCCCTGCAGTAATCTTAGG+TGG + chr5_2:40347449-40347468 Msa0770180:intron 50.0%
!! GACCGTTTCTAAGGTCTGCA+AGG + chr5_2:40348194-40348213 Msa0770180:CDS 50.0%
! TGTTGGAACGTGGTATCGAG+AGG + chr5_2:40349217-40349236 Msa0770180:CDS 50.0%
! TGGATTGCATGCGTGGATTG+TGG + chr5_2:40349294-40349313 Msa0770180:CDS 50.0%
! GGATTGCATGCGTGGATTGT+GGG + chr5_2:40349295-40349314 Msa0770180:CDS 50.0%
TGAGGCAAAGGTCCATGTTG+TGG - chr5_2:40352967-40352986 None:intergenic 50.0%
!! TGGGTTGGCATCGATAACCA+TGG + chr5_2:40353770-40353789 Msa0770180:CDS 50.0%
! AAAGCGGCCTCCATCACTTT+TGG - chr5_2:40354710-40354729 None:intergenic 50.0%
! CATGGCGTTGAGACTTGGAA+TGG + chr5_2:40355597-40355616 Msa0770180:CDS 50.0%
GACTTGGAATGGTTCAGAGG+TGG + chr5_2:40355608-40355627 Msa0770180:intron 50.0%
CTTGGAATGGTTCAGAGGTG+GGG + chr5_2:40355610-40355629 Msa0770180:intron 50.0%
TCCTTTCTGTCATCAGGGGT+AGG + chr5_2:40355711-40355730 Msa0770180:intron 50.0%
CCTTTCTGTCATCAGGGGTA+GGG + chr5_2:40355712-40355731 Msa0770180:intron 50.0%
CTTTCTGTCATCAGGGGTAG+GGG + chr5_2:40355713-40355732 Msa0770180:intron 50.0%
ACAAGAATGCGCCTAGGGCA+TGG - chr5_2:40345896-40345915 None:intergenic 55.0%
GGCCAAAGACACATGGTGTC+GGG - chr5_2:40346381-40346400 None:intergenic 55.0%
!! TTGGTTCTACTGCTGTCCCG+TGG + chr5_2:40347289-40347308 Msa0770180:intron 55.0%
CATAGCTGTGTCGAGAAGGC+TGG + chr5_2:40349636-40349655 Msa0770180:intron 55.0%
GCATCGCCGGATTTGAGTAC+TGG + chr5_2:40351760-40351779 Msa0770180:intron 55.0%
GAGAAAGGAACGCGCGTTTC+AGG + chr5_2:40351930-40351949 Msa0770180:intron 55.0%
GGAACGCGCGTTTCAGGAAT+TGG + chr5_2:40351936-40351955 Msa0770180:intron 55.0%
AATGGTTCAGAGGTGGGGTG+TGG + chr5_2:40355615-40355634 Msa0770180:intron 55.0%
CCCTACCCCTGATGACAGAA+AGG - chr5_2:40355715-40355734 None:intergenic 55.0%
TCAGGGGTAGGGGTGGAAAT+AGG + chr5_2:40355723-40355742 Msa0770180:intron 55.0%
GGTAGGGGTGGAAATAGGCT+AGG + chr5_2:40355728-40355747 Msa0770180:CDS 55.0%
TGCCATGCGAGCCTTGCAAG+TGG + chr5_2:40350580-40350599 Msa0770180:intron 60.0%
CACCACTTGCAAGGCTCGCA+TGG - chr5_2:40350585-40350604 None:intergenic 60.0%
TCTGTCATCAGGGGTAGGGG+TGG + chr5_2:40355716-40355735 Msa0770180:intron 60.0%
GGGGTGGAAATAGGCTAGGC+CGG + chr5_2:40355732-40355751 Msa0770180:CDS 60.0%
GGGTGGAAATAGGCTAGGCC+GGG + chr5_2:40355733-40355752 Msa0770180:CDS 60.0%
GGAAATAGGCTAGGCCGGGC+CGG + chr5_2:40355737-40355756 Msa0770180:CDS 65.0%
GAAATAGGCTAGGCCGGGCC+GGG + chr5_2:40355738-40355757 Msa0770180:CDS 65.0%
AGGCCTTACAAAGCCCGGCC+CGG - chr5_2:40355754-40355773 None:intergenic 65.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + chr5_2:40355748-40355767 Msa0770180:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 40345866 40355775 40345866 ID=Msa0770180;Name=Msa0770180
chr5_2 mRNA 40345866 40355775 40345866 ID=Msa0770180-mRNA-1;Parent=Msa0770180;Name=Msa0770180-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0|0|0.54|1|1|11|0|1165
chr5_2 exon 40345866 40346015 40345866 ID=Msa0770180-mRNA-1:exon:12875;Parent=Msa0770180-mRNA-1
chr5_2 exon 40347815 40349620 40347815 ID=Msa0770180-mRNA-1:exon:12876;Parent=Msa0770180-mRNA-1
chr5_2 exon 40349717 40349909 40349717 ID=Msa0770180-mRNA-1:exon:12877;Parent=Msa0770180-mRNA-1
chr5_2 exon 40352920 40353026 40352920 ID=Msa0770180-mRNA-1:exon:12878;Parent=Msa0770180-mRNA-1
chr5_2 exon 40353131 40353651 40353131 ID=Msa0770180-mRNA-1:exon:12879;Parent=Msa0770180-mRNA-1
chr5_2 exon 40353739 40353862 40353739 ID=Msa0770180-mRNA-1:exon:12880;Parent=Msa0770180-mRNA-1
chr5_2 exon 40354492 40354570 40354492 ID=Msa0770180-mRNA-1:exon:12881;Parent=Msa0770180-mRNA-1
chr5_2 exon 40354917 40355254 40354917 ID=Msa0770180-mRNA-1:exon:12882;Parent=Msa0770180-mRNA-1
chr5_2 exon 40355351 40355433 40355351 ID=Msa0770180-mRNA-1:exon:12883;Parent=Msa0770180-mRNA-1
chr5_2 exon 40355579 40355626 40355579 ID=Msa0770180-mRNA-1:exon:12884;Parent=Msa0770180-mRNA-1
chr5_2 exon 40355727 40355775 40355727 ID=Msa0770180-mRNA-1:exon:12885;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40345866 40346015 40345866 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40347815 40349620 40347815 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40349717 40349909 40349717 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40352920 40353026 40352920 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40353131 40353651 40353131 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40353739 40353862 40353739 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40354492 40354570 40354492 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40354917 40355254 40354917 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40355351 40355433 40355351 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40355579 40355626 40355579 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
chr5_2 CDS 40355727 40355775 40355727 ID=Msa0770180-mRNA-1:cds;Parent=Msa0770180-mRNA-1
Gene Sequence

>Msa0770180

ATGCCCAAGGCGCATGGTAATGCAATTCCATGCCCTAGGCGCATTCTTGTGTGCTTTCGGGCCCAATTTCTCCAATCTTCGTCGTTTTTAGGTCTTCGTCTTCAAATAACTTGCCTCAGAACTTCGGAACATAATTCCTCCATATATAAAGAATATGAATGTGTGCCAAATTGTGATGATGAATTAAAGGCTACGATTGGACAAGTATTTGATACGTTAGCAGAAGGTAAAAAAATTTACGAAAAATACGCACTCTCTGTCGGATTTAGTGTGCGTTCATCATCATCGATTATAGATAAAAACGGCGTGAAGCGTTGGAAGTATTTTGTTTTCTCGAAAGAGGGTTATTCGCCGAATAAGAAGGATGGTAAAGAGCAAAGTGAATCTACTGTCAAGGTTAGAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTCAAATGGATGGGGGAAGGTAAGTATGAGATAGCTCGATTTCATAAAAGCCATACATATCCACTTGCTTCACCTATGAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCAGTTCACAAAAGCTTATTACATGCATGTAGTAGAGCAAATATAGGAACTTCAAAAGCTTTCCACTTATTAAAAGAACAGTGTTGGGGTTATGAAAATGTTGGATGCACGCAGCGAGATCTTCAAAACTATTCCAGAGATTTAAAGACTTTGAATAAAGATTCTGATGCACATGTTTTGATAGATTACTTTAGAAGGAAGCAAGAAGTTAATCCATGCTTTTATTATGCGTATGAGGTAGGTGAAGAATGCCGATTGAAGCATGTTTTTTGGGAAGATGGTATTTGTAGGAAAAATTATTCCTTATTTGGGGATGTGGTTTCATTTGATACTACGTATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCACCGGGATAAACCATCATCGACAATCTATTACCTTCGGCGTAGGACTTATAACAAATGAGAAAAGTGATTCATTCGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGCGGACATAAGCCAACTCTTATAATAACCGACCAAGATCCTTCCATGAAAGTGGCTATAGAAAATATGTTTGATGCTTCTACTCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTTTCCATGTATGATGAGGATGAATTCAACAAAAGTTTCAAGTCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGACTTGGGCGTTTTTGATGACAAGGTTTAAGTTAGAAAAGAATAAATGGTTGGCACATATGTTTGAGATTCGAAGCACGTGGATCCCAACATATTTCAAAGACACTTTTCTGGCAGGGATATTGAGAACAACATCAAGATCAGAAACTGAGAATTCTTTCTATGGTAATTTTCTAAATCCTAATGTTAACTTGGTTGAATTTTGGATGAGATTTGATTCAGCAATAGAAGCGCAACGACATAAGGAGTTACTAGCTGATAATAACTCAATTCATTCTAAACCAAAACTATTGTTGGAACGTGGTATCGAGAGGCATGCAAGAGATGTGTATACTCGTGGGAACTTTTATATATTTCAACATGAATTATGGATTGCATGCGTGGATTGTGGGATTGAAAATAAGAAAGATGAAGATGGGATGGAAATATTTCATATATATGATAATAGTGAGATCAATGGTAAACTTCGAGAAGTTGTGTATAACTTGTCAAATCACAATGCAAATTGCTCATGTAAAATGTTTCAGGCTGAAGGAATACCTTGTAGACACATACTTTGTGTTTTAAAGGGAAAAAATTTCAATGAAATACCAAGTAAGTACATTGTGAATAGGTGGACTAAGTTTGCAAACAGAACACCTATTTTTGACATAGCTGACAATGTCTTGGAAGAAGACAGCAAACTCATTTCTGATTTGGACGGATTTGAAGGGAGTTCTAAGAGAACCAGGACAGATGATTTGATTCTTGGGTCCAATATTCCTGACGAAGTAGAAATCCTTCCACCAAAATTTGCAAAGACTAAAGGTAGTGGTAAAAGAATCAAAGGTGGCAAAGAGAAGGCTATTGAACAGCAACAAAAAAAAGCAAGACTTTGTAAGGCATGCGTATATGAAGATGATGATGTCATTGATTCTCTGACCTTTCAAGAGCCACAACATGGACCTTTGCCTCAAGCCAATCAAATTGATGATTCGGTTCCTTATGAAGGGAAGTCAGAGGATAATCCATTAGGCATTTATAAAAGAGAGTTTGTTTGTCATCGTGGTGGTTCTATTAGTCTACACAAAAATAATGAAGTGGAAGGTCAAAGAAAACGAAAGTCATCAAGATGTAATTGTGGTGCAAAATTGTTGGTAAATATAACCACAATTAACTTGGAGAACAAGTGGGTCATGAAATACTTCAATAATAATCATAACCATGAATTATTAGATGATAAAGAGGTTCAATTTCTTCCTGCTTATCGAAACATTTCAATTGTTGATCAAGATCGCATTCTTTTGTTGTCAAAAGCTGGTTGCTCTGTAAATTTAATAATAAGAGTGCTTAAGTTAGAGAAAGAAGTAGATGCAGGAAATCTACCATTTTTGGAGAAAGATAATAGGAATTTTATCCAATCTCAAAGTGGTGTTGGTAAAGAGTTCGATGCTTCAAATGTTATCAAATTATGTAAAAGTTTGAAAGATGTAGATGATGGATTTCAGTATGAATTTTCAATAGATGAGAATAACAAAATAAATCATTATGACATGCCACTTGGAATATGGGTTGGCATCGATAACCATGGAAATTCCATTTTCTTTGGTTGTGTTCTATTGCGAGATGAGAAGATTTCTACTTTTACATGGGCTATAAAGGTTGGGGTTGCTGTCAAGATTAGAAATCATGATGGTGAAGAAGCGAGAATGCGCCAAAAGTACCACAATCCTCGTATTAAAATTGAATCCTTAAAGACAAAATACCGAAAACAAGCTGCAACTAAAGAGTTAGAGAAAGTCATTCAAGTGATTAAAGGCATGCCTGAAATCCAAGAAAAGTTGGTGGATGTTGATTCTAAGGTTCGAAATAATGATGAATTGAATATTGGAAATCCTTTACCTTCAAAAACAAAATGTCGACCAAAAGGATCAAGGCTAAAAGGAGGAGTTAAAATTGCAAAGAAGACTCTTCATTGTCATGTTCTAAATTGCGGTGGAACTGATCATGACTCGCGAAATTGTTCAAATAAAAAGAAAAATATTGAAGCATTACCTTCTCAATCTCCTAATAAGCAAGAGGATGAAGGGTTGGAGAAAATCATCTTAATAATGAGGTCTGCTATACTATGTTGCAACAATGATTTCAACTTCCAGAGAAGAAGTGTTCAAAGACTTAACATGGCGTTGAGACTTGGAATGGTTCAGAGGGGTAGGGGTGGAAATAGGCTAGGCCGGGCCGGGCTTTGTAAGGCCTAA
Protein sequence

>Msa0770180

MPKAHGNAIPCPRRILVCFRAQFLQSSSFLGLRLQITCLRTSEHNSSIYKEYECVPNCDDELKATIGQVFDTLAEGKKIYEKYALSVGFSVRSSSSIIDKNGVKRWKYFVFSKEGYSPNKKDGKEQSESTVKVRRRRALTREGCNANVVFKWMGEGKYEIARFHKSHTYPLASPMKRPFLRSARKVNSVHKSLLHACSRANIGTSKAFHLLKEQCWGYENVGCTQRDLQNYSRDLKTLNKDSDAHVLIDYFRRKQEVNPCFYYAYEVGEECRLKHVFWEDGICRKNYSLFGDVVSFDTTYQTNKYHLIFAPFTGINHHRQSITFGVGLITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKVAIENMFDASTHRLCMWHIMKKVSEKVGVSMYDEDEFNKSFKSCVWGSETPNEFEETWAFLMTRFKLEKNKWLAHMFEIRSTWIPTYFKDTFLAGILRTTSRSETENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNNSIHSKPKLLLERGIERHARDVYTRGNFYIFQHELWIACVDCGIENKKDEDGMEIFHIYDNSEINGKLREVVYNLSNHNANCSCKMFQAEGIPCRHILCVLKGKNFNEIPSKYIVNRWTKFANRTPIFDIADNVLEEDSKLISDLDGFEGSSKRTRTDDLILGSNIPDEVEILPPKFAKTKGSGKRIKGGKEKAIEQQQKKARLCKACVYEDDDVIDSLTFQEPQHGPLPQANQIDDSVPYEGKSEDNPLGIYKREFVCHRGGSISLHKNNEVEGQRKRKSSRCNCGAKLLVNITTINLENKWVMKYFNNNHNHELLDDKEVQFLPAYRNISIVDQDRILLLSKAGCSVNLIIRVLKLEKEVDAGNLPFLEKDNRNFIQSQSGVGKEFDASNVIKLCKSLKDVDDGFQYEFSIDENNKINHYDMPLGIWVGIDNHGNSIFFGCVLLRDEKISTFTWAIKVGVAVKIRNHDGEEARMRQKYHNPRIKIESLKTKYRKQAATKELEKVIQVIKGMPEIQEKLVDVDSKVRNNDELNIGNPLPSKTKCRPKGSRLKGGVKIAKKTLHCHVLNCGGTDHDSRNCSNKKKNIEALPSQSPNKQEDEGLEKIILIMRSAILCCNNDFNFQRRSVQRLNMALRLGMVQRGRGGNRLGRAGLCKA*