AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771400 MtrunA17_Chr5g0425261 91.885 382 23 2 1 379 1 377 0.0 710
Msa0771400 MtrunA17_Chr5g0424801 90.576 382 28 2 1 379 1 377 0.0 697
Msa0771400 MtrunA17_Chr5g0424741 54.916 417 135 8 1 367 1 414 2.86e-133 391
Msa0771400 MtrunA17_Chr5g0424931 54.430 395 139 9 1 364 8 392 1.10e-130 385
Msa0771400 MtrunA17_Chr1g0178011 53.806 381 140 10 1 364 1 362 1.17e-119 354
Msa0771400 MtrunA17_Chr2g0289221 52.071 338 126 14 1 321 9 327 1.25e-96 292
Msa0771400 MtrunA17_Chr5g0417281 49.112 338 149 8 8 335 7 331 5.62e-96 296
Msa0771400 MtrunA17_Chr5g0417211 51.506 332 126 11 1 315 1 314 5.39e-89 274
Msa0771400 MtrunA17_Chr2g0277461 45.052 384 180 14 6 374 7 374 3.14e-87 271
Msa0771400 MtrunA17_Chr5g0436761 45.665 346 159 10 6 336 6 337 9.15e-87 270
Msa0771400 MtrunA17_Chr2g0277531 43.789 322 152 12 6 315 14 318 3.30e-74 233
Msa0771400 MtrunA17_Chr5g0425661 58.673 196 65 7 12 195 37 228 7.13e-65 206
Msa0771400 MtrunA17_Chr3g0115271 33.810 420 200 11 9 378 16 407 4.10e-62 209
Msa0771400 MtrunA17_Chr1g0181211 36.480 392 181 13 9 341 24 406 4.14e-58 200
Msa0771400 MtrunA17_Chr1g0199681 34.951 412 188 17 9 361 91 481 7.32e-58 199
Msa0771400 MtrunA17_Chr2g0326761 35.092 379 185 12 9 336 8 376 2.59e-57 198
Msa0771400 MtrunA17_Chr4g0028971 35.897 390 182 13 9 340 9 388 3.40e-55 192
Msa0771400 MtrunA17_Chr5g0424791 67.606 142 42 2 61 200 12 151 7.68e-54 175
Msa0771400 MtrunA17_Chr7g0264171 30.807 409 191 14 9 344 28 417 2.82e-50 178
Msa0771400 MtrunA17_Chr7g0264161 32.704 318 172 11 22 315 2 301 3.47e-43 152
Msa0771400 MtrunA17_Chr2g0282961 29.199 387 232 14 4 364 43 413 3.97e-41 152
Msa0771400 MtrunA17_Chr5g0425651 62.500 112 41 1 227 338 1 111 2.01e-39 136
Msa0771400 MtrunA17_Chr2g0276781 28.497 386 231 10 12 371 23 389 1.01e-37 144
Msa0771400 MtrunA17_Chr4g0009751 28.691 359 236 8 12 358 19 369 1.39e-37 143
Msa0771400 MtrunA17_Chr7g0239061 28.611 360 238 8 12 359 14 366 7.16e-37 141
Msa0771400 MtrunA17_Chr2g0285461 29.888 358 222 11 9 343 20 371 1.94e-36 140
Msa0771400 MtrunA17_Chr8g0385791 29.586 338 219 8 12 335 59 391 2.90e-36 140
Msa0771400 MtrunA17_Chr8g0346711 29.661 354 223 10 12 352 29 369 5.22e-35 136
Msa0771400 MtrunA17_Chr4g0046371 29.534 386 225 15 12 369 38 404 1.34e-34 135
Msa0771400 MtrunA17_Chr2g0301251 30.145 345 214 13 9 335 20 355 1.26e-33 132
Msa0771400 MtrunA17_Chr5g0433301 29.619 341 217 10 12 335 24 358 5.41e-33 130
Msa0771400 MtrunA17_Chr4g0070181 28.818 347 216 10 9 335 20 355 5.52e-33 130
Msa0771400 MtrunA17_Chr8g0376771 28.533 368 213 13 9 343 20 370 8.19e-33 130
Msa0771400 MtrunA17_Chr1g0156321 30.409 342 212 12 12 335 43 376 1.35e-32 129
Msa0771400 MtrunA17_Chr3g0109391 29.326 341 218 10 12 335 26 360 6.33e-32 127
Msa0771400 MtrunA17_Chr8g0389081 28.291 357 207 11 9 335 29 366 2.18e-28 117
Msa0771400 MtrunA17_Chr4g0029671 28.351 388 239 13 12 371 54 430 6.73e-28 115
Msa0771400 MtrunA17_Chr2g0326281 28.325 406 240 13 12 376 56 451 2.40e-27 114
Msa0771400 MtrunA17_Chr8g0356211 26.316 228 135 9 125 335 9 220 3.06e-14 72.8
Msa0771400 MtrunA17_Chr5g0419861 35.897 117 69 3 50 160 12 128 9.13e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771400 AT1G77850.2 34.492 374 190 12 8 336 15 378 8.89e-62 209
Msa0771400 AT1G77850.1 34.492 374 190 12 8 336 15 378 1.09e-61 208
Msa0771400 AT4G30080.1 36.061 391 189 14 9 347 16 397 9.63e-56 194
Msa0771400 AT2G28350.1 33.503 394 187 14 9 340 7 387 1.80e-52 185
Msa0771400 AT2G28350.2 33.503 394 187 14 9 340 7 387 2.13e-52 185
Msa0771400 AT2G46530.3 31.129 363 223 9 12 358 42 393 3.33e-44 162
Msa0771400 AT2G46530.1 31.129 363 223 9 12 358 21 372 3.46e-44 161
Msa0771400 AT3G61830.1 30.595 353 213 11 12 345 25 364 3.61e-43 159
Msa0771400 AT1G34390.1 30.563 373 220 12 12 364 27 380 1.08e-39 149
Msa0771400 AT1G59750.2 31.088 386 227 13 12 374 22 391 1.12e-39 149
Msa0771400 AT1G59750.1 31.564 358 211 12 12 351 22 363 1.21e-39 149
Msa0771400 AT1G59750.3 31.564 358 211 12 12 351 22 363 1.21e-39 149
Msa0771400 AT1G59750.4 31.564 358 211 12 12 351 22 363 1.27e-39 149
Msa0771400 AT1G35520.1 31.332 383 206 15 12 364 27 382 3.40e-39 147
Msa0771400 AT1G34410.1 30.548 383 209 15 12 364 27 382 2.11e-37 142
Msa0771400 AT1G35540.1 31.169 385 204 18 12 364 27 382 9.82e-37 140
Msa0771400 AT1G34310.1 30.990 384 212 15 9 364 24 382 1.27e-36 140
Msa0771400 AT5G62000.2 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771400 AT5G62000.5 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771400 AT5G62000.3 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771400 AT5G62000.1 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771400 AT5G62000.4 28.933 356 216 10 12 344 61 402 1.68e-36 141
Msa0771400 AT4G23980.2 28.818 347 222 9 12 340 12 351 8.24e-36 138
Msa0771400 AT4G23980.1 28.818 347 222 9 12 340 12 351 1.16e-35 138
Msa0771400 AT1G35240.1 30.571 350 193 13 12 335 27 352 2.87e-35 136
Msa0771400 AT1G30330.1 29.661 354 222 10 12 343 23 371 4.48e-35 137
Msa0771400 AT1G30330.3 29.661 354 222 10 12 343 25 373 4.52e-35 137
Msa0771400 AT1G30330.2 29.661 354 222 10 12 343 25 373 4.52e-35 137
Msa0771400 AT5G37020.2 30.321 343 212 11 12 335 22 356 1.11e-34 135
Msa0771400 AT5G37020.1 30.205 341 215 10 12 335 22 356 1.67e-34 135
Msa0771400 AT1G34170.1 30.471 361 208 14 12 349 25 365 1.40e-33 130
Msa0771400 AT2G33860.1 29.049 389 229 13 12 378 54 417 9.37e-32 126
Msa0771400 AT1G19850.1 30.347 346 218 10 7 335 49 388 2.95e-31 125
Msa0771400 AT1G19850.2 30.347 346 218 10 7 335 38 377 3.16e-31 125
Msa0771400 AT1G19220.1 28.448 348 216 10 9 335 20 355 4.86e-31 125
Msa0771400 AT3G61830.2 30.464 302 183 9 59 345 24 313 1.16e-30 123
Msa0771400 AT5G20730.3 29.023 348 215 11 9 335 21 357 2.55e-30 123
Msa0771400 AT5G20730.1 29.023 348 215 11 9 335 21 357 2.61e-30 123
Msa0771400 AT5G20730.2 29.310 348 213 12 9 335 21 356 6.47e-30 122
Msa0771400 AT5G60450.2 29.060 351 212 13 12 335 41 381 4.56e-29 119
Msa0771400 AT5G60450.1 29.060 351 212 13 12 335 65 405 4.61e-29 119
Msa0771400 AT1G43950.1 32.843 204 117 6 12 203 27 222 8.00e-28 109
Msa0771400 AT1G34170.2 28.492 358 193 13 12 349 25 339 3.63e-27 112
Msa0771400 AT1G34170.3 28.492 358 193 13 12 349 25 339 6.43e-27 112
Msa0771400 AT2G46530.2 30.545 275 168 8 94 358 24 285 3.88e-25 107
Msa0771400 AT2G33860.2 28.315 279 168 10 112 378 2 260 4.35e-18 85.9
Msa0771400 AT5G37020.3 28.897 263 168 8 85 335 6 261 7.37e-18 85.9

Find 100 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGCATATCTGCCATATTT+TGG 0.143600 5_2:+43855655 None:intergenic
TGTCTCCATCATCGTCTTCT+TGG 0.236516 5_2:+43855387 None:intergenic
AACTGATGAGATTAAGGTTT+TGG 0.252605 5_2:-43855027 Msa0771400:CDS
TAAACTTTAGAGTGAATCTT+TGG 0.260426 5_2:+43855614 None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG 0.268826 5_2:-43854779 Msa0771400:CDS
GATGACAATTTCTCAGCTTA+AGG 0.289847 5_2:-43854826 Msa0771400:CDS
GAATTTAACTGATGAGATTA+AGG 0.298587 5_2:-43855033 Msa0771400:CDS
CGACCCTGCCAAGGTTTGTT+GGG 0.299743 5_2:+43854149 None:intergenic
TGCCAAGGATTGACTAGGTT+TGG 0.313165 5_2:+43854267 None:intergenic
GATCTTTCCCAAGCTTGATT+TGG 0.314401 5_2:-43855285 Msa0771400:CDS
ACCTCAAGCATGCGCCAATT+AGG 0.318991 5_2:+43854765 None:intergenic
ATGAAGATTGGTTGGAAATC+TGG 0.337904 5_2:-43854897 Msa0771400:CDS
CTACTTCCCACGAGGTCATC+TGG 0.355762 5_2:-43855591 Msa0771400:CDS
TCGACCCTGCCAAGGTTTGT+TGG 0.360193 5_2:+43854148 None:intergenic
CCTCAAGCATGCGCCAATTA+GGG 0.367711 5_2:+43854766 None:intergenic
ATCTTTGGAATCTTGACGTC+GGG 0.375178 5_2:+43855629 None:intergenic
TCCATCATCGTCTTCTTGGC+CGG 0.379595 5_2:+43855391 None:intergenic
AGATTTCCAACCAATCTTCA+TGG 0.383662 5_2:+43854899 None:intergenic
ATGACAATTTCTCAGCTTAA+GGG 0.392754 5_2:-43854825 Msa0771400:CDS
CTCGTGTGGAACCCAAAATA+TGG 0.402726 5_2:-43855667 Msa0771400:CDS
GCCGGGAACTACAGGAGGAG+GGG 0.417463 5_2:+43855409 None:intergenic
CGCTTCATCTGTAGTGAACT+TGG 0.424216 5_2:+43855070 None:intergenic
AATTCCGACAGATATCTTTC+CGG 0.425831 5_2:+43855103 None:intergenic
CTTGGTCAGTTACGGGAGTC+AGG 0.426329 5_2:+43855435 None:intergenic
TGGCCGGGAACTACAGGAGG+AGG 0.428083 5_2:+43855407 None:intergenic
CGACCTTAAAAGCCGAGAAT+GGG 0.441124 5_2:-43855237 Msa0771400:CDS
TGGAATCTTGACGTCGGGGC+CGG 0.443805 5_2:+43855634 None:intergenic
CCAAGGTTTGGCTATGTGTC+AGG 0.447799 5_2:+43854114 None:intergenic
GACTCGTCCAAATCAAGCTT+GGG 0.456946 5_2:+43855278 None:intergenic
GTGTATTATCCGACAGCTAT+TGG 0.461034 5_2:-43854963 Msa0771400:CDS
TCTTCTTGGCCGGGAACTAC+AGG 0.462528 5_2:+43855401 None:intergenic
CCATCATCGTCTTCTTGGCC+GGG 0.465753 5_2:+43855392 None:intergenic
TACGGGAGTCAGGAGCAGTT+TGG 0.469490 5_2:+43855445 None:intergenic
CCGGGAACTACAGGAGGAGG+GGG 0.475602 5_2:+43855410 None:intergenic
GTTGACGATGCCATGAAGAT+TGG 0.477758 5_2:-43854909 Msa0771400:CDS
GATGAAAACAACAGAATCGT+TGG 0.490573 5_2:+43855136 None:intergenic
AGACTCGTCCAAATCAAGCT+TGG 0.490804 5_2:+43855277 None:intergenic
GAAGATTCATATTTCTTCAA+AGG 0.492904 5_2:+43854858 None:intergenic
ATGGTTCTTGTGGCAGCAGT+AGG 0.493323 5_2:+43855551 None:intergenic
TTATCATAGGTTAACTGGGA+TGG 0.493859 5_2:-43854309 Msa0771400:intron
CCGACCTTAAAAGCCGAGAA+TGG 0.494002 5_2:-43855238 Msa0771400:CDS
GACCCTGCCAAGGTTTGTTG+GGG 0.496074 5_2:+43854150 None:intergenic
GGCGGAGTTGACGGTGGAGG+AGG 0.496620 5_2:+43854209 None:intergenic
TGAGGCGGAGTTGACGGTGG+AGG 0.507469 5_2:+43854206 None:intergenic
ATCCAAACCTAGTCAATCCT+TGG 0.508187 5_2:-43854269 Msa0771400:CDS
CAACCTGCCAAGGATTGACT+AGG 0.513736 5_2:+43854262 None:intergenic
GAGACGATGCATGGAATGGA+TGG 0.515792 5_2:+43855512 None:intergenic
TCATCCTCTGCCACCTCGTG+TGG 0.517268 5_2:-43855681 Msa0771400:CDS
AATCTCAGTAGATTACATAC+TGG 0.519388 5_2:-43855194 Msa0771400:CDS
CCCTAATTGGCGCATGCTTG+AGG 0.522896 5_2:-43854766 Msa0771400:intron
GGTTCCACACGAGGTGGCAG+AGG 0.527487 5_2:+43855677 None:intergenic
GGAAGAGACGATGCATGGAA+TGG 0.530637 5_2:+43855508 None:intergenic
TGGTTCTTGTGGCAGCAGTA+GGG 0.533159 5_2:+43855552 None:intergenic
TGACTAGGTTTGGATTCTGC+GGG 0.536979 5_2:+43854277 None:intergenic
GATGAACTCTCAGCAAGTCT+AGG 0.537540 5_2:+43854174 None:intergenic
ACTACAGATGAAGCGGATGA+AGG 0.543135 5_2:-43855062 Msa0771400:CDS
AGATATCTGTCGGAATTCGC+AGG 0.543135 5_2:-43855097 Msa0771400:CDS
CCCTGCCAAGGTTTGTTGGG+GGG 0.543970 5_2:+43854152 None:intergenic
TTTGGATGCAGTGGAATTGG+CGG 0.544683 5_2:-43855009 Msa0771400:CDS
TTGTAAACTTCAACCTGCCA+AGG 0.544687 5_2:+43854252 None:intergenic
AAACCTAGTCAATCCTTGGC+AGG 0.546100 5_2:-43854265 Msa0771400:CDS
GAGGAGGAAGTCAAAGGTGC+AGG 0.548119 5_2:+43854225 None:intergenic
ACGATGCCATGAAGATTGGT+TGG 0.558168 5_2:-43854905 Msa0771400:CDS
ACCCTGCCAAGGTTTGTTGG+GGG 0.559662 5_2:+43854151 None:intergenic
TCAGTAGATTACATACTGGC+TGG 0.560711 5_2:-43855190 Msa0771400:CDS
CCCGGCCAAGAAGACGATGA+TGG 0.562611 5_2:-43855392 Msa0771400:CDS
GGTTCTTGTGGCAGCAGTAG+GGG 0.568653 5_2:+43855553 None:intergenic
GGCCGGGAACTACAGGAGGA+GGG 0.579671 5_2:+43855408 None:intergenic
TTGACTAGGTTTGGATTCTG+CGG 0.581555 5_2:+43854276 None:intergenic
TGGACGGTAACGATCAAGAA+TGG 0.583957 5_2:+43855532 None:intergenic
CAAGTTCACTACAGATGAAG+CGG 0.584809 5_2:-43855069 Msa0771400:CDS
AAAATATGGCAGATATGCGC+CGG 0.589425 5_2:-43855653 Msa0771400:CDS
TGACAATTTCTCAGCTTAAG+GGG 0.599563 5_2:-43854824 Msa0771400:CDS
TAATCTACTGAGATTTGCAT+AGG 0.604127 5_2:+43855202 None:intergenic
TCAACGGAAGAGACGATGCA+TGG 0.604313 5_2:+43855503 None:intergenic
GCAAAGACCTCGTCGGTGTG+AGG 0.608714 5_2:+43855467 None:intergenic
CAAACCTTGGCAGGGTCGAG+TGG 0.615213 5_2:-43854144 Msa0771400:CDS
GACCTTAAAAGCCGAGAATG+GGG 0.616896 5_2:-43855236 Msa0771400:CDS
CGATGCATGGAATGGATGGA+CGG 0.620709 5_2:+43855516 None:intergenic
ACAGATGAAGCGGATGAAGG+AGG 0.630115 5_2:-43855059 Msa0771400:CDS
AATCTTTGGAATCTTGACGT+CGG 0.630358 5_2:+43855628 None:intergenic
ACGATCAAGAATGGTTCTTG+TGG 0.631537 5_2:+43855541 None:intergenic
TCTTGAGGCGGAGTTGACGG+TGG 0.632846 5_2:+43854203 None:intergenic
TCACGGCAACCAATAGCTGT+CGG 0.635734 5_2:+43854954 None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG 0.637006 5_2:+43855355 None:intergenic
AGTACCACTCGACCCTGCCA+AGG 0.642496 5_2:+43854140 None:intergenic
TCTGCCGGAAAGATATCTGT+CGG 0.642648 5_2:-43855107 Msa0771400:CDS
AGGATCAACAAAGAGATCAA+CGG 0.651533 5_2:+43855487 None:intergenic
ACCTTAAAAGCCGAGAATGG+GGG 0.652954 5_2:-43855235 Msa0771400:CDS
TGTTGATCCTCACACCGACG+AGG 0.655379 5_2:-43855474 Msa0771400:CDS
TCTTGGCCGGGAACTACAGG+AGG 0.657068 5_2:+43855404 None:intergenic
TAGCATCCACCACAAAATCA+CGG 0.661399 5_2:+43854937 None:intergenic
CAGTTTGGCAAAGACCTCGT+CGG 0.663811 5_2:+43855460 None:intergenic
AGGTGGCAGAGGATGAGACA+TGG 0.663852 5_2:+43855688 None:intergenic
TCTTTGGAATCTTGACGTCG+GGG 0.665271 5_2:+43855630 None:intergenic
ATCAAGTTAGAGCATTCGAT+AGG 0.670484 5_2:+43855305 None:intergenic
CATGTTCCAGATGACCTCGT+GGG 0.672658 5_2:+43855585 None:intergenic
GCATGTTCCAGATGACCTCG+TGG 0.672744 5_2:+43855584 None:intergenic
ACGGTGGAGGAGGAAGTCAA+AGG 0.680164 5_2:+43854219 None:intergenic
AAAGTTTACTACTTCCCACG+AGG 0.761653 5_2:-43855599 Msa0771400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATCTTTTTATCAT+AGG - chr5_2:43855489-43855508 Msa0771400:CDS 15.0%
!!! GTTTTTTATCTTTTTATCAT+AGG - chr5_2:43855489-43855508 Msa0771400:CDS 15.0%
!! TCAATCAAATAATCTTATCA+TGG + chr5_2:43855125-43855144 None:intergenic 20.0%
!! TCAATCAAATAATCTTATCA+TGG + chr5_2:43855125-43855144 None:intergenic 20.0%
!!! TAAACTTTAGAGTGAATCTT+TGG + chr5_2:43854200-43854219 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG - chr5_2:43854778-43854797 Msa0771400:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG + chr5_2:43854956-43854975 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG - chr5_2:43855067-43855086 Msa0771400:CDS 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG + chr5_2:43855332-43855351 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG + chr5_2:43855400-43855419 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG - chr5_2:43855497-43855516 Msa0771400:CDS 25.0%
!! CTTTTTATCATAGGTTAACT+GGG - chr5_2:43855498-43855517 Msa0771400:CDS 25.0%
!!! TAAACTTTAGAGTGAATCTT+TGG + chr5_2:43854200-43854219 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG - chr5_2:43854778-43854797 Msa0771400:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG + chr5_2:43854956-43854975 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG - chr5_2:43855067-43855086 Msa0771400:CDS 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG + chr5_2:43855332-43855351 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG + chr5_2:43855400-43855419 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG - chr5_2:43855497-43855516 Msa0771400:CDS 25.0%
!! CTTTTTATCATAGGTTAACT+GGG - chr5_2:43855498-43855517 Msa0771400:CDS 25.0%
TAATCTACTGAGATTTGCAT+AGG + chr5_2:43854612-43854631 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG - chr5_2:43854617-43854636 Msa0771400:intron 30.0%
! AACTGATGAGATTAAGGTTT+TGG - chr5_2:43854784-43854803 Msa0771400:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG - chr5_2:43854986-43855005 Msa0771400:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG - chr5_2:43855032-43855051 Msa0771400:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG + chr5_2:43855380-43855399 None:intergenic 30.0%
TAATCTACTGAGATTTGCAT+AGG + chr5_2:43854612-43854631 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG - chr5_2:43854617-43854636 Msa0771400:intron 30.0%
! AACTGATGAGATTAAGGTTT+TGG - chr5_2:43854784-43854803 Msa0771400:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG - chr5_2:43854986-43855005 Msa0771400:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG - chr5_2:43855032-43855051 Msa0771400:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG + chr5_2:43855380-43855399 None:intergenic 30.0%
!! AATCTTTGGAATCTTGACGT+CGG + chr5_2:43854186-43854205 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG + chr5_2:43854327-43854346 None:intergenic 35.0%
! ATCAAGTTAGAGCATTCGAT+AGG + chr5_2:43854509-43854528 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG + chr5_2:43854678-43854697 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG - chr5_2:43854689-43854708 Msa0771400:intron 35.0%
AATTCCGACAGATATCTTTC+CGG + chr5_2:43854711-43854730 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG + chr5_2:43854915-43854934 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG - chr5_2:43854914-43854933 Msa0771400:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG - chr5_2:43854985-43855004 Msa0771400:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG - chr5_2:43854987-43855006 Msa0771400:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG + chr5_2:43855251-43855270 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG + chr5_2:43855252-43855271 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG + chr5_2:43855371-43855390 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG - chr5_2:43855502-43855521 Msa0771400:CDS 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG + chr5_2:43855626-43855645 None:intergenic 35.0%
!! AATCTTTGGAATCTTGACGT+CGG + chr5_2:43854186-43854205 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG + chr5_2:43854327-43854346 None:intergenic 35.0%
! ATCAAGTTAGAGCATTCGAT+AGG + chr5_2:43854509-43854528 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG + chr5_2:43854678-43854697 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG - chr5_2:43854689-43854708 Msa0771400:intron 35.0%
AATTCCGACAGATATCTTTC+CGG + chr5_2:43854711-43854730 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG + chr5_2:43854915-43854934 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG - chr5_2:43854914-43854933 Msa0771400:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG - chr5_2:43854985-43855004 Msa0771400:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG - chr5_2:43854987-43855006 Msa0771400:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG + chr5_2:43855251-43855270 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG + chr5_2:43855252-43855271 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG + chr5_2:43855371-43855390 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG - chr5_2:43855502-43855521 Msa0771400:CDS 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG + chr5_2:43855626-43855645 None:intergenic 35.0%
! GCGCATATCTGCCATATTTT+GGG + chr5_2:43854158-43854177 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG - chr5_2:43854158-43854177 Msa0771400:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG + chr5_2:43854185-43854204 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG - chr5_2:43854212-43854231 Msa0771400:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG + chr5_2:43854273-43854292 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG + chr5_2:43854459-43854478 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG - chr5_2:43854526-43854545 Msa0771400:intron 40.0%
TATATGTGTACCCCCATTCT+CGG + chr5_2:43854589-43854608 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG - chr5_2:43854621-43854640 Msa0771400:intron 40.0%
CAAGTTCACTACAGATGAAG+CGG - chr5_2:43854742-43854761 Msa0771400:intron 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG - chr5_2:43854793-43854812 Msa0771400:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG - chr5_2:43854848-43854867 Msa0771400:CDS 40.0%
!! TATTGGTTGCCGTGATTTTG+TGG - chr5_2:43854865-43854884 Msa0771400:CDS 40.0%
TAGCATCCACCACAAAATCA+CGG + chr5_2:43854877-43854896 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+CGG + chr5_2:43855538-43855557 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG - chr5_2:43855542-43855561 Msa0771400:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG + chr5_2:43855562-43855581 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG + chr5_2:43855623-43855642 None:intergenic 40.0%
! GCGCATATCTGCCATATTTT+GGG + chr5_2:43854158-43854177 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG - chr5_2:43854158-43854177 Msa0771400:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG + chr5_2:43854185-43854204 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG - chr5_2:43854212-43854231 Msa0771400:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG + chr5_2:43854273-43854292 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG + chr5_2:43854459-43854478 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG - chr5_2:43854526-43854545 Msa0771400:intron 40.0%
TATATGTGTACCCCCATTCT+CGG + chr5_2:43854589-43854608 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG - chr5_2:43854621-43854640 Msa0771400:intron 40.0%
CAAGTTCACTACAGATGAAG+CGG - chr5_2:43854742-43854761 Msa0771400:intron 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG - chr5_2:43854793-43854812 Msa0771400:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG - chr5_2:43854848-43854867 Msa0771400:CDS 40.0%
!! TATTGGTTGCCGTGATTTTG+TGG - chr5_2:43854865-43854884 Msa0771400:CDS 40.0%
TAGCATCCACCACAAAATCA+CGG + chr5_2:43854877-43854896 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+CGG + chr5_2:43855538-43855557 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG - chr5_2:43855542-43855561 Msa0771400:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG + chr5_2:43855562-43855581 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG + chr5_2:43855623-43855642 None:intergenic 40.0%
!!! CATATTTTGGGTTCCACACG+AGG + chr5_2:43854146-43854165 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG - chr5_2:43854144-43854163 Msa0771400:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG + chr5_2:43854159-43854178 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG + chr5_2:43854184-43854203 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG + chr5_2:43854282-43854301 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG + chr5_2:43854427-43854446 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG + chr5_2:43854536-43854555 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG + chr5_2:43854537-43854556 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG + chr5_2:43854576-43854595 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG - chr5_2:43854574-43854593 Msa0771400:intron 45.0%
GACCTTAAAAGCCGAGAATG+GGG - chr5_2:43854575-43854594 Msa0771400:intron 45.0%
ACCTTAAAAGCCGAGAATGG+GGG - chr5_2:43854576-43854595 Msa0771400:intron 45.0%
TCTGCCGGAAAGATATCTGT+CGG - chr5_2:43854704-43854723 Msa0771400:intron 45.0%
AGATATCTGTCGGAATTCGC+AGG - chr5_2:43854714-43854733 Msa0771400:intron 45.0%
CGCTTCATCTGTAGTGAACT+TGG + chr5_2:43854744-43854763 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG - chr5_2:43854749-43854768 Msa0771400:intron 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG - chr5_2:43854799-43854818 Msa0771400:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG - chr5_2:43854802-43854821 Msa0771400:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG - chr5_2:43854902-43854921 Msa0771400:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG - chr5_2:43854906-43854925 Msa0771400:CDS 45.0%
TGACTAGGTTTGGATTCTGC+GGG + chr5_2:43855537-43855556 None:intergenic 45.0%
TGCCAAGGATTGACTAGGTT+TGG + chr5_2:43855547-43855566 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG - chr5_2:43855546-43855565 Msa0771400:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG + chr5_2:43855614-43855633 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG + chr5_2:43855640-43855659 None:intergenic 45.0%
!!! CATATTTTGGGTTCCACACG+AGG + chr5_2:43854146-43854165 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG - chr5_2:43854144-43854163 Msa0771400:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG + chr5_2:43854159-43854178 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG + chr5_2:43854184-43854203 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG + chr5_2:43854282-43854301 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG + chr5_2:43854427-43854446 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG + chr5_2:43854536-43854555 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG + chr5_2:43854537-43854556 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG + chr5_2:43854576-43854595 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG - chr5_2:43854574-43854593 Msa0771400:intron 45.0%
GACCTTAAAAGCCGAGAATG+GGG - chr5_2:43854575-43854594 Msa0771400:intron 45.0%
ACCTTAAAAGCCGAGAATGG+GGG - chr5_2:43854576-43854595 Msa0771400:intron 45.0%
TCTGCCGGAAAGATATCTGT+CGG - chr5_2:43854704-43854723 Msa0771400:intron 45.0%
AGATATCTGTCGGAATTCGC+AGG - chr5_2:43854714-43854733 Msa0771400:intron 45.0%
CGCTTCATCTGTAGTGAACT+TGG + chr5_2:43854744-43854763 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG - chr5_2:43854749-43854768 Msa0771400:intron 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG - chr5_2:43854799-43854818 Msa0771400:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG - chr5_2:43854802-43854821 Msa0771400:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG - chr5_2:43854902-43854921 Msa0771400:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG - chr5_2:43854906-43854925 Msa0771400:CDS 45.0%
TGACTAGGTTTGGATTCTGC+GGG + chr5_2:43855537-43855556 None:intergenic 45.0%
TGCCAAGGATTGACTAGGTT+TGG + chr5_2:43855547-43855566 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG - chr5_2:43855546-43855565 Msa0771400:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG + chr5_2:43855614-43855633 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG + chr5_2:43855640-43855659 None:intergenic 45.0%
!!! ATTTTGGGTTCCACACGAGG+TGG + chr5_2:43854143-43854162 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG + chr5_2:43854229-43854248 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG + chr5_2:43854262-43854281 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG + chr5_2:43854263-43854282 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG + chr5_2:43854298-43854317 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG + chr5_2:43854302-43854321 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG + chr5_2:43854306-43854325 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG + chr5_2:43854311-43854330 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG + chr5_2:43854354-43854373 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG + chr5_2:43854387-43854406 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG + chr5_2:43854423-43854442 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG - chr5_2:43854573-43854592 Msa0771400:intron 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG + chr5_2:43854580-43854599 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG - chr5_2:43854752-43854771 Msa0771400:intron 50.0%
TCACGGCAACCAATAGCTGT+CGG + chr5_2:43854860-43854879 None:intergenic 50.0%
! TGGTTGCCGTGATTTTGTGG+TGG - chr5_2:43854868-43854887 Msa0771400:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG + chr5_2:43855048-43855067 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG + chr5_2:43855049-43855068 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG + chr5_2:43855552-43855571 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG - chr5_2:43855654-43855673 Msa0771400:CDS 50.0%
!!! ATTTTGGGTTCCACACGAGG+TGG + chr5_2:43854143-43854162 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG + chr5_2:43854229-43854248 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG + chr5_2:43854262-43854281 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG + chr5_2:43854263-43854282 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG + chr5_2:43854298-43854317 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG + chr5_2:43854302-43854321 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG + chr5_2:43854306-43854325 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG + chr5_2:43854311-43854330 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG + chr5_2:43854354-43854373 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG + chr5_2:43854387-43854406 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG + chr5_2:43854423-43854442 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG - chr5_2:43854573-43854592 Msa0771400:intron 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG + chr5_2:43854580-43854599 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG - chr5_2:43854752-43854771 Msa0771400:intron 50.0%
TCACGGCAACCAATAGCTGT+CGG + chr5_2:43854860-43854879 None:intergenic 50.0%
! TGGTTGCCGTGATTTTGTGG+TGG - chr5_2:43854868-43854887 Msa0771400:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG + chr5_2:43855048-43855067 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG + chr5_2:43855049-43855068 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG + chr5_2:43855552-43855571 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG - chr5_2:43855654-43855673 Msa0771400:CDS 50.0%
CTACTTCCCACGAGGTCATC+TGG - chr5_2:43854220-43854239 Msa0771400:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG + chr5_2:43854230-43854249 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG + chr5_2:43854261-43854280 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG - chr5_2:43854337-43854356 Msa0771400:intron 55.0%
TACGGGAGTCAGGAGCAGTT+TGG + chr5_2:43854369-43854388 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG + chr5_2:43854379-43854398 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG + chr5_2:43854386-43854405 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG + chr5_2:43854413-43854432 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG + chr5_2:43854422-43854441 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG - chr5_2:43855045-43855064 Msa0771400:CDS 55.0%
! GAGGAGGAAGTCAAAGGTGC+AGG + chr5_2:43855589-43855608 None:intergenic 55.0%
ACGGTGGAGGAGGAAGTCAA+AGG + chr5_2:43855595-43855614 None:intergenic 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG + chr5_2:43855663-43855682 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG + chr5_2:43855664-43855683 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG + chr5_2:43855665-43855684 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG + chr5_2:43855666-43855685 None:intergenic 55.0%
CTACTTCCCACGAGGTCATC+TGG - chr5_2:43854220-43854239 Msa0771400:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG + chr5_2:43854230-43854249 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG + chr5_2:43854261-43854280 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG - chr5_2:43854337-43854356 Msa0771400:intron 55.0%
TACGGGAGTCAGGAGCAGTT+TGG + chr5_2:43854369-43854388 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG + chr5_2:43854379-43854398 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG + chr5_2:43854386-43854405 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG + chr5_2:43854413-43854432 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG + chr5_2:43854422-43854441 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG - chr5_2:43855045-43855064 Msa0771400:CDS 55.0%
! GAGGAGGAAGTCAAAGGTGC+AGG + chr5_2:43855589-43855608 None:intergenic 55.0%
ACGGTGGAGGAGGAAGTCAA+AGG + chr5_2:43855595-43855614 None:intergenic 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG + chr5_2:43855663-43855682 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG + chr5_2:43855664-43855683 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG + chr5_2:43855665-43855684 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG + chr5_2:43855666-43855685 None:intergenic 55.0%
TCATCCTCTGCCACCTCGTG+TGG - chr5_2:43854130-43854149 Msa0771400:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG + chr5_2:43854180-43854199 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG + chr5_2:43854347-43854366 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG + chr5_2:43854397-43854416 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG + chr5_2:43854410-43854429 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG - chr5_2:43854419-43854438 Msa0771400:intron 60.0%
TCTTGAGGCGGAGTTGACGG+TGG + chr5_2:43855611-43855630 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG - chr5_2:43855658-43855677 Msa0771400:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG + chr5_2:43855662-43855681 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG - chr5_2:43855659-43855678 Msa0771400:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG - chr5_2:43855667-43855686 Msa0771400:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG + chr5_2:43855674-43855693 None:intergenic 60.0%
TCATCCTCTGCCACCTCGTG+TGG - chr5_2:43854130-43854149 Msa0771400:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG + chr5_2:43854180-43854199 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG + chr5_2:43854347-43854366 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG + chr5_2:43854397-43854416 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG + chr5_2:43854410-43854429 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG - chr5_2:43854419-43854438 Msa0771400:intron 60.0%
TCTTGAGGCGGAGTTGACGG+TGG + chr5_2:43855611-43855630 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG - chr5_2:43855658-43855677 Msa0771400:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG + chr5_2:43855662-43855681 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG - chr5_2:43855659-43855678 Msa0771400:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG - chr5_2:43855667-43855686 Msa0771400:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG + chr5_2:43855674-43855693 None:intergenic 60.0%
GGTTCCACACGAGGTGGCAG+AGG + chr5_2:43854137-43854156 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG + chr5_2:43854404-43854423 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG - chr5_2:43854401-43854420 Msa0771400:intron 65.0%
GCCGGGAACTACAGGAGGAG+GGG + chr5_2:43854405-43854424 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG + chr5_2:43854406-43854425 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG + chr5_2:43854407-43854426 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG + chr5_2:43855608-43855627 None:intergenic 65.0%
GGTTCCACACGAGGTGGCAG+AGG + chr5_2:43854137-43854156 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG + chr5_2:43854404-43854423 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG - chr5_2:43854401-43854420 Msa0771400:intron 65.0%
GCCGGGAACTACAGGAGGAG+GGG + chr5_2:43854405-43854424 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG + chr5_2:43854406-43854425 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG + chr5_2:43854407-43854426 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG + chr5_2:43855608-43855627 None:intergenic 65.0%
GGCGGAGTTGACGGTGGAGG+AGG + chr5_2:43855605-43855624 None:intergenic 70.0%
GGCGGAGTTGACGGTGGAGG+AGG + chr5_2:43855605-43855624 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 43854125 43855708 43854125 ID=Msa0771400;Name=Msa0771400
chr5_2 mRNA 43854125 43855708 43854125 ID=Msa0771400-mRNA-1;Parent=Msa0771400;Name=Msa0771400-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|379
chr5_2 exon 43854767 43855708 43854767 ID=Msa0771400-mRNA-1:exon:13459;Parent=Msa0771400-mRNA-1
chr5_2 exon 43854125 43854322 43854125 ID=Msa0771400-mRNA-1:exon:13458;Parent=Msa0771400-mRNA-1
chr5_2 CDS 43854767 43855708 43854767 ID=Msa0771400-mRNA-1:cds;Parent=Msa0771400-mRNA-1
chr5_2 CDS 43854125 43854322 43854125 ID=Msa0771400-mRNA-1:cds;Parent=Msa0771400-mRNA-1
Gene Sequence

>Msa0771400

ATGTCTCATCCTCTGCCACCTCGTGTGGAACCCAAAATATGGCAGATATGCGCCGGCCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCATCTGGAACATGCATGTTCTTCCCCTACTGCTGCCACAAGAACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCGTCTCTTCCGTTGATCTCTTTGTTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTGACTCCCGTAACTGACCAAGAACCCCCTCCTCCTGTAGTTCCCGGCCAAGAAGACGATGATGGAGACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATTGTGCAAGAGTATTATGCGTACCTATCGAATGCTCTAACTTGATCTTTCCCAAGCTTGATTTGGACGAGTCTCAGAGCATCACTGTCACCGACCTTAAAAGCCGAGAATGGGGGTACACATATACCTATGCAAATCTCAGTAGATTACATACTGGCTGGTTAAATTTTGTACGAGAGAAGAAACTTGTCGCCAACGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAACACCAAGTTCACTACAGATGAAGCGGATGAAGGAGGCGAGAATTTAACTGATGAGATTAAGGTTTTGGATGCAGTGGAATTGGCGGAGAAGAACACAGCATTTGATGTTGTGTATTATCCGACAGCTATTGGTTGCCGTGATTTTGTGGTGGATGCTAAGACTGTTGACGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGAGTGAAACTTCCTTTGAAGAAATATGAATCTTCAAGTTCAAAGATGACAATTTCTCAGCTTAAGGGGACAATCTCTTTTGTCTTTAATGATTCTTCTAATGTCCCTAATTGGCGCATGCTTGAGGTTAACTGGGATGGACTTGATTTCCCGCAGAATCCAAACCTAGTCAATCCTTGGCAGGTTGAAGTTTACAACATACCTGCACCTTTGACTTCCTCCTCCACCGTCAACTCCGCCTCAAGAAAAACTCCTAGACTTGCTGAGAGTTCATCCCCCCAACAAACCTTGGCAGGGTCGAGTGGTACTTTGCCTGACACATAG
Protein sequence

>Msa0771400

MSHPLPPRVEPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRPSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCARVLCVPIECSNLIFPKLDLDESQSITVTDLKSREWGYTYTYANLSRLHTGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEADEGGENLTDEIKVLDAVELAEKNTAFDVVYYPTAIGCRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSSSKMTISQLKGTISFVFNDSSNVPNWRMLEVNWDGLDFPQNPNLVNPWQVEVYNIPAPLTSSSTVNSASRKTPRLAESSSPQQTLAGSSGTLPDT*