AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771540 MtrunA17_Chr5g0425261 91.885 382 23 2 1 379 1 377 0.0 710
Msa0771540 MtrunA17_Chr5g0424801 90.576 382 28 2 1 379 1 377 0.0 697
Msa0771540 MtrunA17_Chr5g0424741 54.916 417 135 8 1 367 1 414 2.86e-133 391
Msa0771540 MtrunA17_Chr5g0424931 54.430 395 139 9 1 364 8 392 1.10e-130 385
Msa0771540 MtrunA17_Chr1g0178011 53.806 381 140 10 1 364 1 362 1.17e-119 354
Msa0771540 MtrunA17_Chr2g0289221 52.071 338 126 14 1 321 9 327 1.25e-96 292
Msa0771540 MtrunA17_Chr5g0417281 49.112 338 149 8 8 335 7 331 5.62e-96 296
Msa0771540 MtrunA17_Chr5g0417211 51.506 332 126 11 1 315 1 314 5.39e-89 274
Msa0771540 MtrunA17_Chr2g0277461 45.052 384 180 14 6 374 7 374 3.14e-87 271
Msa0771540 MtrunA17_Chr5g0436761 45.665 346 159 10 6 336 6 337 9.15e-87 270
Msa0771540 MtrunA17_Chr2g0277531 43.789 322 152 12 6 315 14 318 3.30e-74 233
Msa0771540 MtrunA17_Chr5g0425661 58.673 196 65 7 12 195 37 228 7.13e-65 206
Msa0771540 MtrunA17_Chr3g0115271 33.810 420 200 11 9 378 16 407 4.10e-62 209
Msa0771540 MtrunA17_Chr1g0181211 36.480 392 181 13 9 341 24 406 4.14e-58 200
Msa0771540 MtrunA17_Chr1g0199681 34.951 412 188 17 9 361 91 481 7.32e-58 199
Msa0771540 MtrunA17_Chr2g0326761 35.092 379 185 12 9 336 8 376 2.59e-57 198
Msa0771540 MtrunA17_Chr4g0028971 35.897 390 182 13 9 340 9 388 3.40e-55 192
Msa0771540 MtrunA17_Chr5g0424791 67.606 142 42 2 61 200 12 151 7.68e-54 175
Msa0771540 MtrunA17_Chr7g0264171 30.807 409 191 14 9 344 28 417 2.82e-50 178
Msa0771540 MtrunA17_Chr7g0264161 32.704 318 172 11 22 315 2 301 3.47e-43 152
Msa0771540 MtrunA17_Chr2g0282961 29.199 387 232 14 4 364 43 413 3.97e-41 152
Msa0771540 MtrunA17_Chr5g0425651 62.500 112 41 1 227 338 1 111 2.01e-39 136
Msa0771540 MtrunA17_Chr2g0276781 28.497 386 231 10 12 371 23 389 1.01e-37 144
Msa0771540 MtrunA17_Chr4g0009751 28.691 359 236 8 12 358 19 369 1.39e-37 143
Msa0771540 MtrunA17_Chr7g0239061 28.611 360 238 8 12 359 14 366 7.16e-37 141
Msa0771540 MtrunA17_Chr2g0285461 29.888 358 222 11 9 343 20 371 1.94e-36 140
Msa0771540 MtrunA17_Chr8g0385791 29.586 338 219 8 12 335 59 391 2.90e-36 140
Msa0771540 MtrunA17_Chr8g0346711 29.661 354 223 10 12 352 29 369 5.22e-35 136
Msa0771540 MtrunA17_Chr4g0046371 29.534 386 225 15 12 369 38 404 1.34e-34 135
Msa0771540 MtrunA17_Chr2g0301251 30.145 345 214 13 9 335 20 355 1.26e-33 132
Msa0771540 MtrunA17_Chr5g0433301 29.619 341 217 10 12 335 24 358 5.41e-33 130
Msa0771540 MtrunA17_Chr4g0070181 28.818 347 216 10 9 335 20 355 5.52e-33 130
Msa0771540 MtrunA17_Chr8g0376771 28.533 368 213 13 9 343 20 370 8.19e-33 130
Msa0771540 MtrunA17_Chr1g0156321 30.409 342 212 12 12 335 43 376 1.35e-32 129
Msa0771540 MtrunA17_Chr3g0109391 29.326 341 218 10 12 335 26 360 6.33e-32 127
Msa0771540 MtrunA17_Chr8g0389081 28.291 357 207 11 9 335 29 366 2.18e-28 117
Msa0771540 MtrunA17_Chr4g0029671 28.351 388 239 13 12 371 54 430 6.73e-28 115
Msa0771540 MtrunA17_Chr2g0326281 28.325 406 240 13 12 376 56 451 2.40e-27 114
Msa0771540 MtrunA17_Chr8g0356211 26.316 228 135 9 125 335 9 220 3.06e-14 72.8
Msa0771540 MtrunA17_Chr5g0419861 35.897 117 69 3 50 160 12 128 9.13e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771540 AT1G77850.2 34.492 374 190 12 8 336 15 378 8.89e-62 209
Msa0771540 AT1G77850.1 34.492 374 190 12 8 336 15 378 1.09e-61 208
Msa0771540 AT4G30080.1 36.061 391 189 14 9 347 16 397 9.63e-56 194
Msa0771540 AT2G28350.1 33.503 394 187 14 9 340 7 387 1.80e-52 185
Msa0771540 AT2G28350.2 33.503 394 187 14 9 340 7 387 2.13e-52 185
Msa0771540 AT2G46530.3 31.129 363 223 9 12 358 42 393 3.33e-44 162
Msa0771540 AT2G46530.1 31.129 363 223 9 12 358 21 372 3.46e-44 161
Msa0771540 AT3G61830.1 30.595 353 213 11 12 345 25 364 3.61e-43 159
Msa0771540 AT1G34390.1 30.563 373 220 12 12 364 27 380 1.08e-39 149
Msa0771540 AT1G59750.2 31.088 386 227 13 12 374 22 391 1.12e-39 149
Msa0771540 AT1G59750.1 31.564 358 211 12 12 351 22 363 1.21e-39 149
Msa0771540 AT1G59750.3 31.564 358 211 12 12 351 22 363 1.21e-39 149
Msa0771540 AT1G59750.4 31.564 358 211 12 12 351 22 363 1.27e-39 149
Msa0771540 AT1G35520.1 31.332 383 206 15 12 364 27 382 3.40e-39 147
Msa0771540 AT1G34410.1 30.548 383 209 15 12 364 27 382 2.11e-37 142
Msa0771540 AT1G35540.1 31.169 385 204 18 12 364 27 382 9.82e-37 140
Msa0771540 AT1G34310.1 30.990 384 212 15 9 364 24 382 1.27e-36 140
Msa0771540 AT5G62000.2 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771540 AT5G62000.5 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771540 AT5G62000.3 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771540 AT5G62000.1 28.933 356 216 10 12 344 61 402 1.58e-36 141
Msa0771540 AT5G62000.4 28.933 356 216 10 12 344 61 402 1.68e-36 141
Msa0771540 AT4G23980.2 28.818 347 222 9 12 340 12 351 8.24e-36 138
Msa0771540 AT4G23980.1 28.818 347 222 9 12 340 12 351 1.16e-35 138
Msa0771540 AT1G35240.1 30.571 350 193 13 12 335 27 352 2.87e-35 136
Msa0771540 AT1G30330.1 29.661 354 222 10 12 343 23 371 4.48e-35 137
Msa0771540 AT1G30330.3 29.661 354 222 10 12 343 25 373 4.52e-35 137
Msa0771540 AT1G30330.2 29.661 354 222 10 12 343 25 373 4.52e-35 137
Msa0771540 AT5G37020.2 30.321 343 212 11 12 335 22 356 1.11e-34 135
Msa0771540 AT5G37020.1 30.205 341 215 10 12 335 22 356 1.67e-34 135
Msa0771540 AT1G34170.1 30.471 361 208 14 12 349 25 365 1.40e-33 130
Msa0771540 AT2G33860.1 29.049 389 229 13 12 378 54 417 9.37e-32 126
Msa0771540 AT1G19850.1 30.347 346 218 10 7 335 49 388 2.95e-31 125
Msa0771540 AT1G19850.2 30.347 346 218 10 7 335 38 377 3.16e-31 125
Msa0771540 AT1G19220.1 28.448 348 216 10 9 335 20 355 4.86e-31 125
Msa0771540 AT3G61830.2 30.464 302 183 9 59 345 24 313 1.16e-30 123
Msa0771540 AT5G20730.3 29.023 348 215 11 9 335 21 357 2.55e-30 123
Msa0771540 AT5G20730.1 29.023 348 215 11 9 335 21 357 2.61e-30 123
Msa0771540 AT5G20730.2 29.310 348 213 12 9 335 21 356 6.47e-30 122
Msa0771540 AT5G60450.2 29.060 351 212 13 12 335 41 381 4.56e-29 119
Msa0771540 AT5G60450.1 29.060 351 212 13 12 335 65 405 4.61e-29 119
Msa0771540 AT1G43950.1 32.843 204 117 6 12 203 27 222 8.00e-28 109
Msa0771540 AT1G34170.2 28.492 358 193 13 12 349 25 339 3.63e-27 112
Msa0771540 AT1G34170.3 28.492 358 193 13 12 349 25 339 6.43e-27 112
Msa0771540 AT2G46530.2 30.545 275 168 8 94 358 24 285 3.88e-25 107
Msa0771540 AT2G33860.2 28.315 279 168 10 112 378 2 260 4.35e-18 85.9
Msa0771540 AT5G37020.3 28.897 263 168 8 85 335 6 261 7.37e-18 85.9

Find 100 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGCATATCTGCCATATTT+TGG 0.143600 5_2:+44316883 None:intergenic
TGTCTCCATCATCGTCTTCT+TGG 0.236516 5_2:+44316615 None:intergenic
AACTGATGAGATTAAGGTTT+TGG 0.252605 5_2:-44316255 Msa0771540:CDS
TAAACTTTAGAGTGAATCTT+TGG 0.260426 5_2:+44316842 None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG 0.268826 5_2:-44316007 Msa0771540:CDS
GATGACAATTTCTCAGCTTA+AGG 0.289847 5_2:-44316054 Msa0771540:CDS
GAATTTAACTGATGAGATTA+AGG 0.298587 5_2:-44316261 Msa0771540:CDS
CGACCCTGCCAAGGTTTGTT+GGG 0.299743 5_2:+44315377 None:intergenic
TGCCAAGGATTGACTAGGTT+TGG 0.313165 5_2:+44315495 None:intergenic
GATCTTTCCCAAGCTTGATT+TGG 0.314401 5_2:-44316513 Msa0771540:CDS
ACCTCAAGCATGCGCCAATT+AGG 0.318991 5_2:+44315993 None:intergenic
ATGAAGATTGGTTGGAAATC+TGG 0.337904 5_2:-44316125 Msa0771540:CDS
CTACTTCCCACGAGGTCATC+TGG 0.355762 5_2:-44316819 Msa0771540:CDS
TCGACCCTGCCAAGGTTTGT+TGG 0.360193 5_2:+44315376 None:intergenic
CCTCAAGCATGCGCCAATTA+GGG 0.367711 5_2:+44315994 None:intergenic
ATCTTTGGAATCTTGACGTC+GGG 0.375178 5_2:+44316857 None:intergenic
TCCATCATCGTCTTCTTGGC+CGG 0.379595 5_2:+44316619 None:intergenic
AGATTTCCAACCAATCTTCA+TGG 0.383662 5_2:+44316127 None:intergenic
ATGACAATTTCTCAGCTTAA+GGG 0.392754 5_2:-44316053 Msa0771540:CDS
CTCGTGTGGAACCCAAAATA+TGG 0.402726 5_2:-44316895 Msa0771540:CDS
GCCGGGAACTACAGGAGGAG+GGG 0.417463 5_2:+44316637 None:intergenic
CGCTTCATCTGTAGTGAACT+TGG 0.424216 5_2:+44316298 None:intergenic
AATTCCGACAGATATCTTTC+CGG 0.425831 5_2:+44316331 None:intergenic
CTTGGTCAGTTACGGGAGTC+AGG 0.426329 5_2:+44316663 None:intergenic
TGGCCGGGAACTACAGGAGG+AGG 0.428083 5_2:+44316635 None:intergenic
CGACCTTAAAAGCCGAGAAT+GGG 0.441124 5_2:-44316465 Msa0771540:CDS
TGGAATCTTGACGTCGGGGC+CGG 0.443805 5_2:+44316862 None:intergenic
CCAAGGTTTGGCTATGTGTC+AGG 0.447799 5_2:+44315342 None:intergenic
GACTCGTCCAAATCAAGCTT+GGG 0.456946 5_2:+44316506 None:intergenic
GTGTATTATCCGACAGCTAT+TGG 0.461034 5_2:-44316191 Msa0771540:CDS
TCTTCTTGGCCGGGAACTAC+AGG 0.462528 5_2:+44316629 None:intergenic
CCATCATCGTCTTCTTGGCC+GGG 0.465753 5_2:+44316620 None:intergenic
TACGGGAGTCAGGAGCAGTT+TGG 0.469490 5_2:+44316673 None:intergenic
CCGGGAACTACAGGAGGAGG+GGG 0.475602 5_2:+44316638 None:intergenic
GTTGACGATGCCATGAAGAT+TGG 0.477758 5_2:-44316137 Msa0771540:CDS
GATGAAAACAACAGAATCGT+TGG 0.490573 5_2:+44316364 None:intergenic
AGACTCGTCCAAATCAAGCT+TGG 0.490804 5_2:+44316505 None:intergenic
GAAGATTCATATTTCTTCAA+AGG 0.492904 5_2:+44316086 None:intergenic
ATGGTTCTTGTGGCAGCAGT+AGG 0.493323 5_2:+44316779 None:intergenic
TTATCATAGGTTAACTGGGA+TGG 0.493859 5_2:-44315537 Msa0771540:intron
CCGACCTTAAAAGCCGAGAA+TGG 0.494002 5_2:-44316466 Msa0771540:CDS
GACCCTGCCAAGGTTTGTTG+GGG 0.496074 5_2:+44315378 None:intergenic
GGCGGAGTTGACGGTGGAGG+AGG 0.496620 5_2:+44315437 None:intergenic
TGAGGCGGAGTTGACGGTGG+AGG 0.507469 5_2:+44315434 None:intergenic
ATCCAAACCTAGTCAATCCT+TGG 0.508187 5_2:-44315497 Msa0771540:CDS
CAACCTGCCAAGGATTGACT+AGG 0.513736 5_2:+44315490 None:intergenic
GAGACGATGCATGGAATGGA+TGG 0.515792 5_2:+44316740 None:intergenic
TCATCCTCTGCCACCTCGTG+TGG 0.517268 5_2:-44316909 Msa0771540:CDS
AATCTCAGTAGATTACATAC+TGG 0.519388 5_2:-44316422 Msa0771540:CDS
CCCTAATTGGCGCATGCTTG+AGG 0.522896 5_2:-44315994 Msa0771540:intron
GGTTCCACACGAGGTGGCAG+AGG 0.527487 5_2:+44316905 None:intergenic
GGAAGAGACGATGCATGGAA+TGG 0.530637 5_2:+44316736 None:intergenic
TGGTTCTTGTGGCAGCAGTA+GGG 0.533159 5_2:+44316780 None:intergenic
TGACTAGGTTTGGATTCTGC+GGG 0.536979 5_2:+44315505 None:intergenic
GATGAACTCTCAGCAAGTCT+AGG 0.537540 5_2:+44315402 None:intergenic
ACTACAGATGAAGCGGATGA+AGG 0.543135 5_2:-44316290 Msa0771540:CDS
AGATATCTGTCGGAATTCGC+AGG 0.543135 5_2:-44316325 Msa0771540:CDS
CCCTGCCAAGGTTTGTTGGG+GGG 0.543970 5_2:+44315380 None:intergenic
TTTGGATGCAGTGGAATTGG+CGG 0.544683 5_2:-44316237 Msa0771540:CDS
TTGTAAACTTCAACCTGCCA+AGG 0.544687 5_2:+44315480 None:intergenic
AAACCTAGTCAATCCTTGGC+AGG 0.546100 5_2:-44315493 Msa0771540:CDS
GAGGAGGAAGTCAAAGGTGC+AGG 0.548119 5_2:+44315453 None:intergenic
ACGATGCCATGAAGATTGGT+TGG 0.558168 5_2:-44316133 Msa0771540:CDS
ACCCTGCCAAGGTTTGTTGG+GGG 0.559662 5_2:+44315379 None:intergenic
TCAGTAGATTACATACTGGC+TGG 0.560711 5_2:-44316418 Msa0771540:CDS
CCCGGCCAAGAAGACGATGA+TGG 0.562611 5_2:-44316620 Msa0771540:CDS
GGTTCTTGTGGCAGCAGTAG+GGG 0.568653 5_2:+44316781 None:intergenic
GGCCGGGAACTACAGGAGGA+GGG 0.579671 5_2:+44316636 None:intergenic
TTGACTAGGTTTGGATTCTG+CGG 0.581555 5_2:+44315504 None:intergenic
TGGACGGTAACGATCAAGAA+TGG 0.583957 5_2:+44316760 None:intergenic
CAAGTTCACTACAGATGAAG+CGG 0.584809 5_2:-44316297 Msa0771540:CDS
AAAATATGGCAGATATGCGC+CGG 0.589425 5_2:-44316881 Msa0771540:CDS
TGACAATTTCTCAGCTTAAG+GGG 0.599563 5_2:-44316052 Msa0771540:CDS
TAATCTACTGAGATTTGCAT+AGG 0.604127 5_2:+44316430 None:intergenic
TCAACGGAAGAGACGATGCA+TGG 0.604313 5_2:+44316731 None:intergenic
GCAAAGACCTCGTCGGTGTG+AGG 0.608714 5_2:+44316695 None:intergenic
CAAACCTTGGCAGGGTCGAG+TGG 0.615213 5_2:-44315372 Msa0771540:CDS
GACCTTAAAAGCCGAGAATG+GGG 0.616896 5_2:-44316464 Msa0771540:CDS
CGATGCATGGAATGGATGGA+CGG 0.620709 5_2:+44316744 None:intergenic
ACAGATGAAGCGGATGAAGG+AGG 0.630115 5_2:-44316287 Msa0771540:CDS
AATCTTTGGAATCTTGACGT+CGG 0.630358 5_2:+44316856 None:intergenic
ACGATCAAGAATGGTTCTTG+TGG 0.631537 5_2:+44316769 None:intergenic
TCTTGAGGCGGAGTTGACGG+TGG 0.632846 5_2:+44315431 None:intergenic
TCACGGCAACCAATAGCTGT+CGG 0.635734 5_2:+44316182 None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG 0.637006 5_2:+44316583 None:intergenic
AGTACCACTCGACCCTGCCA+AGG 0.642496 5_2:+44315368 None:intergenic
TCTGCCGGAAAGATATCTGT+CGG 0.642648 5_2:-44316335 Msa0771540:CDS
AGGATCAACAAAGAGATCAA+CGG 0.651533 5_2:+44316715 None:intergenic
ACCTTAAAAGCCGAGAATGG+GGG 0.652954 5_2:-44316463 Msa0771540:CDS
TGTTGATCCTCACACCGACG+AGG 0.655379 5_2:-44316702 Msa0771540:CDS
TCTTGGCCGGGAACTACAGG+AGG 0.657068 5_2:+44316632 None:intergenic
TAGCATCCACCACAAAATCA+CGG 0.661399 5_2:+44316165 None:intergenic
CAGTTTGGCAAAGACCTCGT+CGG 0.663811 5_2:+44316688 None:intergenic
AGGTGGCAGAGGATGAGACA+TGG 0.663852 5_2:+44316916 None:intergenic
TCTTTGGAATCTTGACGTCG+GGG 0.665271 5_2:+44316858 None:intergenic
ATCAAGTTAGAGCATTCGAT+AGG 0.670484 5_2:+44316533 None:intergenic
CATGTTCCAGATGACCTCGT+GGG 0.672658 5_2:+44316813 None:intergenic
GCATGTTCCAGATGACCTCG+TGG 0.672744 5_2:+44316812 None:intergenic
ACGGTGGAGGAGGAAGTCAA+AGG 0.680164 5_2:+44315447 None:intergenic
AAAGTTTACTACTTCCCACG+AGG 0.761653 5_2:-44316827 Msa0771540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATCTTTTTATCAT+AGG - chr5_2:44316717-44316736 Msa0771540:CDS 15.0%
!!! GTTTTTTATCTTTTTATCAT+AGG - chr5_2:44316717-44316736 Msa0771540:CDS 15.0%
!! TCAATCAAATAATCTTATCA+TGG + chr5_2:44316353-44316372 None:intergenic 20.0%
!! TCAATCAAATAATCTTATCA+TGG + chr5_2:44316353-44316372 None:intergenic 20.0%
!!! TAAACTTTAGAGTGAATCTT+TGG + chr5_2:44315428-44315447 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG - chr5_2:44316006-44316025 Msa0771540:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG + chr5_2:44316184-44316203 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG - chr5_2:44316295-44316314 Msa0771540:CDS 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG + chr5_2:44316560-44316579 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG + chr5_2:44316628-44316647 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG - chr5_2:44316725-44316744 Msa0771540:CDS 25.0%
!! CTTTTTATCATAGGTTAACT+GGG - chr5_2:44316726-44316745 Msa0771540:CDS 25.0%
!!! TAAACTTTAGAGTGAATCTT+TGG + chr5_2:44315428-44315447 None:intergenic 25.0%
! GAATTTAACTGATGAGATTA+AGG - chr5_2:44316006-44316025 Msa0771540:CDS 25.0%
! GAAGATTCATATTTCTTCAA+AGG + chr5_2:44316184-44316203 None:intergenic 25.0%
! GTACATATGCTTTCTTAATT+TGG - chr5_2:44316295-44316314 Msa0771540:CDS 25.0%
!!! CTATTTTTAGTGAATATCAC+TGG + chr5_2:44316560-44316579 None:intergenic 25.0%
! AAAAGTTTCTACTTAGCATT+AGG + chr5_2:44316628-44316647 None:intergenic 25.0%
!! TCTTTTTATCATAGGTTAAC+TGG - chr5_2:44316725-44316744 Msa0771540:CDS 25.0%
!! CTTTTTATCATAGGTTAACT+GGG - chr5_2:44316726-44316745 Msa0771540:CDS 25.0%
TAATCTACTGAGATTTGCAT+AGG + chr5_2:44315840-44315859 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG - chr5_2:44315845-44315864 Msa0771540:intron 30.0%
! AACTGATGAGATTAAGGTTT+TGG - chr5_2:44316012-44316031 Msa0771540:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG - chr5_2:44316214-44316233 Msa0771540:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG - chr5_2:44316260-44316279 Msa0771540:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG + chr5_2:44316608-44316627 None:intergenic 30.0%
TAATCTACTGAGATTTGCAT+AGG + chr5_2:44315840-44315859 None:intergenic 30.0%
AATCTCAGTAGATTACATAC+TGG - chr5_2:44315845-44315864 Msa0771540:intron 30.0%
! AACTGATGAGATTAAGGTTT+TGG - chr5_2:44316012-44316031 Msa0771540:CDS 30.0%
ATGACAATTTCTCAGCTTAA+GGG - chr5_2:44316214-44316233 Msa0771540:CDS 30.0%
ATTCTTCTAATGTCCCTAAT+TGG - chr5_2:44316260-44316279 Msa0771540:CDS 30.0%
!! AGGAGTATTTACAATGAGAA+AGG + chr5_2:44316608-44316627 None:intergenic 30.0%
!! AATCTTTGGAATCTTGACGT+CGG + chr5_2:44315414-44315433 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG + chr5_2:44315555-44315574 None:intergenic 35.0%
! ATCAAGTTAGAGCATTCGAT+AGG + chr5_2:44315737-44315756 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG + chr5_2:44315906-44315925 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG - chr5_2:44315917-44315936 Msa0771540:intron 35.0%
AATTCCGACAGATATCTTTC+CGG + chr5_2:44315939-44315958 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG + chr5_2:44316143-44316162 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG - chr5_2:44316142-44316161 Msa0771540:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG - chr5_2:44316213-44316232 Msa0771540:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG - chr5_2:44316215-44316234 Msa0771540:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG + chr5_2:44316479-44316498 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG + chr5_2:44316480-44316499 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG + chr5_2:44316599-44316618 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG - chr5_2:44316730-44316749 Msa0771540:CDS 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG + chr5_2:44316854-44316873 None:intergenic 35.0%
!! AATCTTTGGAATCTTGACGT+CGG + chr5_2:44315414-44315433 None:intergenic 35.0%
AGGATCAACAAAGAGATCAA+CGG + chr5_2:44315555-44315574 None:intergenic 35.0%
! ATCAAGTTAGAGCATTCGAT+AGG + chr5_2:44315737-44315756 None:intergenic 35.0%
GATGAAAACAACAGAATCGT+TGG + chr5_2:44315906-44315925 None:intergenic 35.0%
! GTTTTCATCAAAAACTCTGC+CGG - chr5_2:44315917-44315936 Msa0771540:intron 35.0%
AATTCCGACAGATATCTTTC+CGG + chr5_2:44315939-44315958 None:intergenic 35.0%
AGATTTCCAACCAATCTTCA+TGG + chr5_2:44316143-44316162 None:intergenic 35.0%
! ATGAAGATTGGTTGGAAATC+TGG - chr5_2:44316142-44316161 Msa0771540:CDS 35.0%
GATGACAATTTCTCAGCTTA+AGG - chr5_2:44316213-44316232 Msa0771540:CDS 35.0%
TGACAATTTCTCAGCTTAAG+GGG - chr5_2:44316215-44316234 Msa0771540:CDS 35.0%
CTATCAAGTGCAAGAACAAT+GGG + chr5_2:44316479-44316498 None:intergenic 35.0%
TCTATCAAGTGCAAGAACAA+TGG + chr5_2:44316480-44316499 None:intergenic 35.0%
TACAATGAGAAAGGCTTAGA+AGG + chr5_2:44316599-44316618 None:intergenic 35.0%
TTATCATAGGTTAACTGGGA+TGG - chr5_2:44316730-44316749 Msa0771540:CDS 35.0%
! AAGTCTAGGAGTTTTTCTTG+AGG + chr5_2:44316854-44316873 None:intergenic 35.0%
! GCGCATATCTGCCATATTTT+GGG + chr5_2:44315386-44315405 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG - chr5_2:44315386-44315405 Msa0771540:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG + chr5_2:44315413-44315432 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG - chr5_2:44315440-44315459 Msa0771540:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG + chr5_2:44315501-44315520 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG + chr5_2:44315687-44315706 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG - chr5_2:44315754-44315773 Msa0771540:intron 40.0%
TATATGTGTACCCCCATTCT+CGG + chr5_2:44315817-44315836 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG - chr5_2:44315849-44315868 Msa0771540:intron 40.0%
CAAGTTCACTACAGATGAAG+CGG - chr5_2:44315970-44315989 Msa0771540:intron 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG - chr5_2:44316021-44316040 Msa0771540:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG - chr5_2:44316076-44316095 Msa0771540:CDS 40.0%
!! TATTGGTTGCCGTGATTTTG+TGG - chr5_2:44316093-44316112 Msa0771540:CDS 40.0%
TAGCATCCACCACAAAATCA+CGG + chr5_2:44316105-44316124 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+CGG + chr5_2:44316766-44316785 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG - chr5_2:44316770-44316789 Msa0771540:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG + chr5_2:44316790-44316809 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG + chr5_2:44316851-44316870 None:intergenic 40.0%
! GCGCATATCTGCCATATTTT+GGG + chr5_2:44315386-44315405 None:intergenic 40.0%
AAAATATGGCAGATATGCGC+CGG - chr5_2:44315386-44315405 Msa0771540:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG + chr5_2:44315413-44315432 None:intergenic 40.0%
AAAGTTTACTACTTCCCACG+AGG - chr5_2:44315440-44315459 Msa0771540:CDS 40.0%
ACGATCAAGAATGGTTCTTG+TGG + chr5_2:44315501-44315520 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG + chr5_2:44315687-44315706 None:intergenic 40.0%
GATCTTTCCCAAGCTTGATT+TGG - chr5_2:44315754-44315773 Msa0771540:intron 40.0%
TATATGTGTACCCCCATTCT+CGG + chr5_2:44315817-44315836 None:intergenic 40.0%
TCAGTAGATTACATACTGGC+TGG - chr5_2:44315849-44315868 Msa0771540:intron 40.0%
CAAGTTCACTACAGATGAAG+CGG - chr5_2:44315970-44315989 Msa0771540:intron 40.0%
!!! GATTAAGGTTTTGGATGCAG+TGG - chr5_2:44316021-44316040 Msa0771540:CDS 40.0%
GTGTATTATCCGACAGCTAT+TGG - chr5_2:44316076-44316095 Msa0771540:CDS 40.0%
!! TATTGGTTGCCGTGATTTTG+TGG - chr5_2:44316093-44316112 Msa0771540:CDS 40.0%
TAGCATCCACCACAAAATCA+CGG + chr5_2:44316105-44316124 None:intergenic 40.0%
TTGACTAGGTTTGGATTCTG+CGG + chr5_2:44316766-44316785 None:intergenic 40.0%
ATCCAAACCTAGTCAATCCT+TGG - chr5_2:44316770-44316789 Msa0771540:CDS 40.0%
TTGTAAACTTCAACCTGCCA+AGG + chr5_2:44316790-44316809 None:intergenic 40.0%
! TCTAGGAGTTTTTCTTGAGG+CGG + chr5_2:44316851-44316870 None:intergenic 40.0%
!!! CATATTTTGGGTTCCACACG+AGG + chr5_2:44315374-44315393 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG - chr5_2:44315372-44315391 Msa0771540:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG + chr5_2:44315387-44315406 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG + chr5_2:44315412-44315431 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG + chr5_2:44315510-44315529 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG + chr5_2:44315655-44315674 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG + chr5_2:44315764-44315783 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG + chr5_2:44315765-44315784 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG + chr5_2:44315804-44315823 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG - chr5_2:44315802-44315821 Msa0771540:intron 45.0%
GACCTTAAAAGCCGAGAATG+GGG - chr5_2:44315803-44315822 Msa0771540:intron 45.0%
ACCTTAAAAGCCGAGAATGG+GGG - chr5_2:44315804-44315823 Msa0771540:intron 45.0%
TCTGCCGGAAAGATATCTGT+CGG - chr5_2:44315932-44315951 Msa0771540:intron 45.0%
AGATATCTGTCGGAATTCGC+AGG - chr5_2:44315942-44315961 Msa0771540:intron 45.0%
CGCTTCATCTGTAGTGAACT+TGG + chr5_2:44315972-44315991 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG - chr5_2:44315977-44315996 Msa0771540:intron 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG - chr5_2:44316027-44316046 Msa0771540:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG - chr5_2:44316030-44316049 Msa0771540:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG - chr5_2:44316130-44316149 Msa0771540:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG - chr5_2:44316134-44316153 Msa0771540:CDS 45.0%
TGACTAGGTTTGGATTCTGC+GGG + chr5_2:44316765-44316784 None:intergenic 45.0%
TGCCAAGGATTGACTAGGTT+TGG + chr5_2:44316775-44316794 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG - chr5_2:44316774-44316793 Msa0771540:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG + chr5_2:44316842-44316861 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG + chr5_2:44316868-44316887 None:intergenic 45.0%
!!! CATATTTTGGGTTCCACACG+AGG + chr5_2:44315374-44315393 None:intergenic 45.0%
CTCGTGTGGAACCCAAAATA+TGG - chr5_2:44315372-44315391 Msa0771540:CDS 45.0%
! GGCGCATATCTGCCATATTT+TGG + chr5_2:44315387-44315406 None:intergenic 45.0%
!! TCTTTGGAATCTTGACGTCG+GGG + chr5_2:44315412-44315431 None:intergenic 45.0%
TGGACGGTAACGATCAAGAA+TGG + chr5_2:44315510-44315529 None:intergenic 45.0%
TGTCTCCATCATCGTCTTCT+TGG + chr5_2:44315655-44315674 None:intergenic 45.0%
GACTCGTCCAAATCAAGCTT+GGG + chr5_2:44315764-44315783 None:intergenic 45.0%
AGACTCGTCCAAATCAAGCT+TGG + chr5_2:44315765-44315784 None:intergenic 45.0%
!!! CCATTCTCGGCTTTTAAGGT+CGG + chr5_2:44315804-44315823 None:intergenic 45.0%
CGACCTTAAAAGCCGAGAAT+GGG - chr5_2:44315802-44315821 Msa0771540:intron 45.0%
GACCTTAAAAGCCGAGAATG+GGG - chr5_2:44315803-44315822 Msa0771540:intron 45.0%
ACCTTAAAAGCCGAGAATGG+GGG - chr5_2:44315804-44315823 Msa0771540:intron 45.0%
TCTGCCGGAAAGATATCTGT+CGG - chr5_2:44315932-44315951 Msa0771540:intron 45.0%
AGATATCTGTCGGAATTCGC+AGG - chr5_2:44315942-44315961 Msa0771540:intron 45.0%
CGCTTCATCTGTAGTGAACT+TGG + chr5_2:44315972-44315991 None:intergenic 45.0%
ACTACAGATGAAGCGGATGA+AGG - chr5_2:44315977-44315996 Msa0771540:intron 45.0%
!!! GGTTTTGGATGCAGTGGAAT+TGG - chr5_2:44316027-44316046 Msa0771540:CDS 45.0%
TTTGGATGCAGTGGAATTGG+CGG - chr5_2:44316030-44316049 Msa0771540:CDS 45.0%
GTTGACGATGCCATGAAGAT+TGG - chr5_2:44316130-44316149 Msa0771540:CDS 45.0%
ACGATGCCATGAAGATTGGT+TGG - chr5_2:44316134-44316153 Msa0771540:CDS 45.0%
TGACTAGGTTTGGATTCTGC+GGG + chr5_2:44316765-44316784 None:intergenic 45.0%
TGCCAAGGATTGACTAGGTT+TGG + chr5_2:44316775-44316794 None:intergenic 45.0%
AAACCTAGTCAATCCTTGGC+AGG - chr5_2:44316774-44316793 Msa0771540:CDS 45.0%
! TTTTCTTGAGGCGGAGTTGA+CGG + chr5_2:44316842-44316861 None:intergenic 45.0%
GATGAACTCTCAGCAAGTCT+AGG + chr5_2:44316868-44316887 None:intergenic 45.0%
!!! ATTTTGGGTTCCACACGAGG+TGG + chr5_2:44315371-44315390 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG + chr5_2:44315457-44315476 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG + chr5_2:44315490-44315509 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG + chr5_2:44315491-44315510 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG + chr5_2:44315526-44315545 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG + chr5_2:44315530-44315549 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG + chr5_2:44315534-44315553 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG + chr5_2:44315539-44315558 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG + chr5_2:44315582-44315601 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG + chr5_2:44315615-44315634 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG + chr5_2:44315651-44315670 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG - chr5_2:44315801-44315820 Msa0771540:intron 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG + chr5_2:44315808-44315827 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG - chr5_2:44315980-44315999 Msa0771540:intron 50.0%
TCACGGCAACCAATAGCTGT+CGG + chr5_2:44316088-44316107 None:intergenic 50.0%
! TGGTTGCCGTGATTTTGTGG+TGG - chr5_2:44316096-44316115 Msa0771540:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG + chr5_2:44316276-44316295 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG + chr5_2:44316277-44316296 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG + chr5_2:44316780-44316799 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG - chr5_2:44316882-44316901 Msa0771540:CDS 50.0%
!!! ATTTTGGGTTCCACACGAGG+TGG + chr5_2:44315371-44315390 None:intergenic 50.0%
CATGTTCCAGATGACCTCGT+GGG + chr5_2:44315457-44315476 None:intergenic 50.0%
TGGTTCTTGTGGCAGCAGTA+GGG + chr5_2:44315490-44315509 None:intergenic 50.0%
ATGGTTCTTGTGGCAGCAGT+AGG + chr5_2:44315491-44315510 None:intergenic 50.0%
CGATGCATGGAATGGATGGA+CGG + chr5_2:44315526-44315545 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG + chr5_2:44315530-44315549 None:intergenic 50.0%
GGAAGAGACGATGCATGGAA+TGG + chr5_2:44315534-44315553 None:intergenic 50.0%
TCAACGGAAGAGACGATGCA+TGG + chr5_2:44315539-44315558 None:intergenic 50.0%
CAGTTTGGCAAAGACCTCGT+CGG + chr5_2:44315582-44315601 None:intergenic 50.0%
AGGGGGTTCTTGGTCAGTTA+CGG + chr5_2:44315615-44315634 None:intergenic 50.0%
TCCATCATCGTCTTCTTGGC+CGG + chr5_2:44315651-44315670 None:intergenic 50.0%
CCGACCTTAAAAGCCGAGAA+TGG - chr5_2:44315801-44315820 Msa0771540:intron 50.0%
! ACCCCCATTCTCGGCTTTTA+AGG + chr5_2:44315808-44315827 None:intergenic 50.0%
ACAGATGAAGCGGATGAAGG+AGG - chr5_2:44315980-44315999 Msa0771540:intron 50.0%
TCACGGCAACCAATAGCTGT+CGG + chr5_2:44316088-44316107 None:intergenic 50.0%
! TGGTTGCCGTGATTTTGTGG+TGG - chr5_2:44316096-44316115 Msa0771540:CDS 50.0%
CCTCAAGCATGCGCCAATTA+GGG + chr5_2:44316276-44316295 None:intergenic 50.0%
ACCTCAAGCATGCGCCAATT+AGG + chr5_2:44316277-44316296 None:intergenic 50.0%
CAACCTGCCAAGGATTGACT+AGG + chr5_2:44316780-44316799 None:intergenic 50.0%
TTCATCCCCCCAACAAACCT+TGG - chr5_2:44316882-44316901 Msa0771540:CDS 50.0%
CTACTTCCCACGAGGTCATC+TGG - chr5_2:44315448-44315467 Msa0771540:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG + chr5_2:44315458-44315477 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG + chr5_2:44315489-44315508 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG - chr5_2:44315565-44315584 Msa0771540:intron 55.0%
TACGGGAGTCAGGAGCAGTT+TGG + chr5_2:44315597-44315616 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG + chr5_2:44315607-44315626 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG + chr5_2:44315614-44315633 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG + chr5_2:44315641-44315660 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG + chr5_2:44315650-44315669 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG - chr5_2:44316273-44316292 Msa0771540:CDS 55.0%
! GAGGAGGAAGTCAAAGGTGC+AGG + chr5_2:44316817-44316836 None:intergenic 55.0%
ACGGTGGAGGAGGAAGTCAA+AGG + chr5_2:44316823-44316842 None:intergenic 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG + chr5_2:44316891-44316910 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG + chr5_2:44316892-44316911 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG + chr5_2:44316893-44316912 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG + chr5_2:44316894-44316913 None:intergenic 55.0%
CTACTTCCCACGAGGTCATC+TGG - chr5_2:44315448-44315467 Msa0771540:CDS 55.0%
GCATGTTCCAGATGACCTCG+TGG + chr5_2:44315458-44315477 None:intergenic 55.0%
GGTTCTTGTGGCAGCAGTAG+GGG + chr5_2:44315489-44315508 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG - chr5_2:44315565-44315584 Msa0771540:intron 55.0%
TACGGGAGTCAGGAGCAGTT+TGG + chr5_2:44315597-44315616 None:intergenic 55.0%
CTTGGTCAGTTACGGGAGTC+AGG + chr5_2:44315607-44315626 None:intergenic 55.0%
GGGGGTTCTTGGTCAGTTAC+GGG + chr5_2:44315614-44315633 None:intergenic 55.0%
TCTTCTTGGCCGGGAACTAC+AGG + chr5_2:44315641-44315660 None:intergenic 55.0%
CCATCATCGTCTTCTTGGCC+GGG + chr5_2:44315650-44315669 None:intergenic 55.0%
CCCTAATTGGCGCATGCTTG+AGG - chr5_2:44316273-44316292 Msa0771540:CDS 55.0%
! GAGGAGGAAGTCAAAGGTGC+AGG + chr5_2:44316817-44316836 None:intergenic 55.0%
ACGGTGGAGGAGGAAGTCAA+AGG + chr5_2:44316823-44316842 None:intergenic 55.0%
!! ACCCTGCCAAGGTTTGTTGG+GGG + chr5_2:44316891-44316910 None:intergenic 55.0%
!! GACCCTGCCAAGGTTTGTTG+GGG + chr5_2:44316892-44316911 None:intergenic 55.0%
! CGACCCTGCCAAGGTTTGTT+GGG + chr5_2:44316893-44316912 None:intergenic 55.0%
TCGACCCTGCCAAGGTTTGT+TGG + chr5_2:44316894-44316913 None:intergenic 55.0%
TCATCCTCTGCCACCTCGTG+TGG - chr5_2:44315358-44315377 Msa0771540:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG + chr5_2:44315408-44315427 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG + chr5_2:44315575-44315594 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG + chr5_2:44315625-44315644 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG + chr5_2:44315638-44315657 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG - chr5_2:44315647-44315666 Msa0771540:intron 60.0%
TCTTGAGGCGGAGTTGACGG+TGG + chr5_2:44316839-44316858 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG - chr5_2:44316886-44316905 Msa0771540:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG + chr5_2:44316890-44316909 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG - chr5_2:44316887-44316906 Msa0771540:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG - chr5_2:44316895-44316914 Msa0771540:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG + chr5_2:44316902-44316921 None:intergenic 60.0%
TCATCCTCTGCCACCTCGTG+TGG - chr5_2:44315358-44315377 Msa0771540:CDS 60.0%
TGGAATCTTGACGTCGGGGC+CGG + chr5_2:44315408-44315427 None:intergenic 60.0%
GCAAAGACCTCGTCGGTGTG+AGG + chr5_2:44315575-44315594 None:intergenic 60.0%
CTACAGGAGGAGGGGGTTCT+TGG + chr5_2:44315625-44315644 None:intergenic 60.0%
TCTTGGCCGGGAACTACAGG+AGG + chr5_2:44315638-44315657 None:intergenic 60.0%
CCCGGCCAAGAAGACGATGA+TGG - chr5_2:44315647-44315666 Msa0771540:intron 60.0%
TCTTGAGGCGGAGTTGACGG+TGG + chr5_2:44316839-44316858 None:intergenic 60.0%
TCCCCCCAACAAACCTTGGC+AGG - chr5_2:44316886-44316905 Msa0771540:CDS 60.0%
!! CCCTGCCAAGGTTTGTTGGG+GGG + chr5_2:44316890-44316909 None:intergenic 60.0%
CCCCCCAACAAACCTTGGCA+GGG - chr5_2:44316887-44316906 Msa0771540:CDS 60.0%
CAAACCTTGGCAGGGTCGAG+TGG - chr5_2:44316895-44316914 Msa0771540:CDS 60.0%
AGTACCACTCGACCCTGCCA+AGG + chr5_2:44316902-44316921 None:intergenic 60.0%
GGTTCCACACGAGGTGGCAG+AGG + chr5_2:44315365-44315384 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG + chr5_2:44315632-44315651 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG - chr5_2:44315629-44315648 Msa0771540:intron 65.0%
GCCGGGAACTACAGGAGGAG+GGG + chr5_2:44315633-44315652 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG + chr5_2:44315634-44315653 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG + chr5_2:44315635-44315654 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG + chr5_2:44316836-44316855 None:intergenic 65.0%
GGTTCCACACGAGGTGGCAG+AGG + chr5_2:44315365-44315384 None:intergenic 65.0%
CCGGGAACTACAGGAGGAGG+GGG + chr5_2:44315632-44315651 None:intergenic 65.0%
CCCCCTCCTCCTGTAGTTCC+CGG - chr5_2:44315629-44315648 Msa0771540:intron 65.0%
GCCGGGAACTACAGGAGGAG+GGG + chr5_2:44315633-44315652 None:intergenic 65.0%
GGCCGGGAACTACAGGAGGA+GGG + chr5_2:44315634-44315653 None:intergenic 65.0%
TGGCCGGGAACTACAGGAGG+AGG + chr5_2:44315635-44315654 None:intergenic 65.0%
TGAGGCGGAGTTGACGGTGG+AGG + chr5_2:44316836-44316855 None:intergenic 65.0%
GGCGGAGTTGACGGTGGAGG+AGG + chr5_2:44316833-44316852 None:intergenic 70.0%
GGCGGAGTTGACGGTGGAGG+AGG + chr5_2:44316833-44316852 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 44315353 44316936 44315353 ID=Msa0771540;Name=Msa0771540
chr5_2 mRNA 44315353 44316936 44315353 ID=Msa0771540-mRNA-1;Parent=Msa0771540;Name=Msa0771540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|379
chr5_2 exon 44315995 44316936 44315995 ID=Msa0771540-mRNA-1:exon:13525;Parent=Msa0771540-mRNA-1
chr5_2 exon 44315353 44315550 44315353 ID=Msa0771540-mRNA-1:exon:13524;Parent=Msa0771540-mRNA-1
chr5_2 CDS 44315995 44316936 44315995 ID=Msa0771540-mRNA-1:cds;Parent=Msa0771540-mRNA-1
chr5_2 CDS 44315353 44315550 44315353 ID=Msa0771540-mRNA-1:cds;Parent=Msa0771540-mRNA-1
Gene Sequence

>Msa0771540

ATGTCTCATCCTCTGCCACCTCGTGTGGAACCCAAAATATGGCAGATATGCGCCGGCCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACGAGGTCATCTGGAACATGCATGTTCTTCCCCTACTGCTGCCACAAGAACCATTCTTGATCGTTACCGTCCATCCATTCCATGCATCGTCTCTTCCGTTGATCTCTTTGTTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTGACTCCCGTAACTGACCAAGAACCCCCTCCTCCTGTAGTTCCCGGCCAAGAAGACGATGATGGAGACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATTGTGCAAGAGTATTATGCGTACCTATCGAATGCTCTAACTTGATCTTTCCCAAGCTTGATTTGGACGAGTCTCAGAGCATCACTGTCACCGACCTTAAAAGCCGAGAATGGGGGTACACATATACCTATGCAAATCTCAGTAGATTACATACTGGCTGGTTAAATTTTGTACGAGAGAAGAAACTTGTCGCCAACGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAACACCAAGTTCACTACAGATGAAGCGGATGAAGGAGGCGAGAATTTAACTGATGAGATTAAGGTTTTGGATGCAGTGGAATTGGCGGAGAAGAACACAGCATTTGATGTTGTGTATTATCCGACAGCTATTGGTTGCCGTGATTTTGTGGTGGATGCTAAGACTGTTGACGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGAGTGAAACTTCCTTTGAAGAAATATGAATCTTCAAGTTCAAAGATGACAATTTCTCAGCTTAAGGGGACAATCTCTTTTGTCTTTAATGATTCTTCTAATGTCCCTAATTGGCGCATGCTTGAGGTTAACTGGGATGGACTTGATTTCCCGCAGAATCCAAACCTAGTCAATCCTTGGCAGGTTGAAGTTTACAACATACCTGCACCTTTGACTTCCTCCTCCACCGTCAACTCCGCCTCAAGAAAAACTCCTAGACTTGCTGAGAGTTCATCCCCCCAACAAACCTTGGCAGGGTCGAGTGGTACTTTGCCTGACACATAG
Protein sequence

>Msa0771540

MSHPLPPRVEPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRPSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCARVLCVPIECSNLIFPKLDLDESQSITVTDLKSREWGYTYTYANLSRLHTGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEADEGGENLTDEIKVLDAVELAEKNTAFDVVYYPTAIGCRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSSSKMTISQLKGTISFVFNDSSNVPNWRMLEVNWDGLDFPQNPNLVNPWQVEVYNIPAPLTSSSTVNSASRKTPRLAESSSPQQTLAGSSGTLPDT*