Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772140 | AES95624.2 | 83.750 | 240 | 17 | 4 | 1 | 229 | 1 | 229 | 1.00e-122 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772140 | sp|Q8S9H7|DIV_ANTMA | 41.007 | 139 | 68 | 5 | 31 | 159 | 66 | 200 | 2.14e-22 | 95.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772140 | G7K884 | 83.750 | 240 | 17 | 4 | 1 | 229 | 1 | 229 | 4.78e-123 | 357 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0772140 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772140 | MtrunA17_Chr5g0409831 | 83.750 | 240 | 17 | 4 | 1 | 229 | 1 | 229 | 9.20e-127 | 357 |
| Msa0772140 | MtrunA17_Chr5g0409841 | 64.050 | 242 | 63 | 7 | 1 | 229 | 1 | 231 | 7.48e-98 | 285 |
| Msa0772140 | MtrunA17_Chr5g0440731 | 52.482 | 282 | 77 | 7 | 1 | 229 | 17 | 294 | 1.93e-85 | 255 |
| Msa0772140 | MtrunA17_Chr5g0440741 | 52.128 | 282 | 73 | 8 | 1 | 229 | 17 | 289 | 2.74e-81 | 244 |
| Msa0772140 | MtrunA17_Chr7g0241761 | 56.579 | 76 | 30 | 1 | 84 | 159 | 136 | 208 | 1.23e-22 | 93.6 |
| Msa0772140 | MtrunA17_Chr3g0104071 | 43.165 | 139 | 66 | 6 | 29 | 159 | 82 | 215 | 1.88e-22 | 93.2 |
| Msa0772140 | MtrunA17_Chr1g0210471 | 33.146 | 178 | 102 | 6 | 34 | 200 | 67 | 238 | 2.02e-22 | 91.7 |
| Msa0772140 | MtrunA17_Chr1g0162081 | 34.759 | 187 | 97 | 8 | 23 | 192 | 41 | 219 | 2.40e-22 | 92.8 |
| Msa0772140 | MtrunA17_Chr5g0429521 | 57.895 | 76 | 29 | 1 | 84 | 159 | 128 | 200 | 9.42e-22 | 91.3 |
| Msa0772140 | MtrunA17_Chr5g0436501 | 50.538 | 93 | 41 | 2 | 64 | 156 | 105 | 192 | 4.32e-21 | 89.0 |
| Msa0772140 | MtrunA17_Chr2g0331031 | 39.252 | 107 | 62 | 1 | 84 | 190 | 105 | 208 | 1.25e-20 | 89.0 |
| Msa0772140 | MtrunA17_Chr4g0062741 | 47.561 | 82 | 40 | 1 | 84 | 165 | 134 | 212 | 7.79e-20 | 85.9 |
| Msa0772140 | MtrunA17_Chr6g0488471 | 52.778 | 72 | 31 | 1 | 84 | 155 | 93 | 161 | 2.15e-19 | 84.7 |
| Msa0772140 | MtrunA17_Chr4g0059701 | 28.910 | 211 | 102 | 7 | 6 | 215 | 22 | 185 | 2.51e-19 | 84.3 |
| Msa0772140 | MtrunA17_Chr4g0055931 | 40.217 | 92 | 52 | 1 | 76 | 167 | 83 | 171 | 1.10e-18 | 83.2 |
| Msa0772140 | MtrunA17_Chr8g0389241 | 52.778 | 72 | 30 | 1 | 84 | 155 | 101 | 168 | 2.72e-18 | 81.3 |
| Msa0772140 | MtrunA17_Chr5g0415191 | 42.609 | 115 | 53 | 4 | 50 | 164 | 71 | 172 | 1.41e-17 | 79.7 |
| Msa0772140 | MtrunA17_Chr3g0135671 | 45.946 | 74 | 40 | 0 | 82 | 155 | 85 | 158 | 1.41e-17 | 78.6 |
| Msa0772140 | MtrunA17_Chr8g0365011 | 37.778 | 135 | 56 | 5 | 41 | 163 | 60 | 178 | 2.60e-17 | 79.0 |
| Msa0772140 | MtrunA17_Chr5g0432921 | 35.417 | 144 | 81 | 5 | 37 | 180 | 69 | 200 | 2.75e-17 | 77.8 |
| Msa0772140 | MtrunA17_Chr3g0092621 | 37.113 | 97 | 55 | 2 | 83 | 179 | 79 | 169 | 2.92e-16 | 73.9 |
| Msa0772140 | MtrunA17_Chr8g0364731 | 50.000 | 66 | 32 | 1 | 98 | 163 | 11 | 75 | 4.13e-16 | 73.6 |
| Msa0772140 | MtrunA17_Chr5g0432941 | 32.061 | 131 | 80 | 3 | 54 | 180 | 75 | 200 | 7.95e-16 | 73.6 |
| Msa0772140 | MtrunA17_Chr5g0409951 | 42.857 | 112 | 54 | 3 | 4 | 114 | 28 | 130 | 1.97e-15 | 73.2 |
| Msa0772140 | MtrunA17_Chr1g0192061 | 43.590 | 78 | 43 | 1 | 85 | 162 | 58 | 134 | 4.63e-15 | 70.9 |
| Msa0772140 | MtrunA17_Chr3g0113121 | 48.611 | 72 | 33 | 1 | 89 | 156 | 96 | 167 | 1.51e-14 | 70.1 |
| Msa0772140 | MtrunA17_Chr6g0452791 | 39.241 | 79 | 35 | 1 | 88 | 166 | 80 | 145 | 7.56e-13 | 64.7 |
| Msa0772140 | MtrunA17_Chr8g0370121 | 38.235 | 68 | 41 | 1 | 83 | 150 | 95 | 161 | 6.38e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772140 | AT5G23650.1 | 38.547 | 179 | 90 | 6 | 37 | 205 | 61 | 229 | 3.52e-23 | 95.9 |
| Msa0772140 | AT2G38090.1 | 39.726 | 146 | 66 | 6 | 31 | 159 | 69 | 209 | 3.82e-23 | 95.1 |
| Msa0772140 | AT5G08520.1 | 37.179 | 156 | 81 | 4 | 23 | 165 | 41 | 192 | 5.53e-23 | 94.7 |
| Msa0772140 | AT5G58900.1 | 57.895 | 76 | 29 | 1 | 84 | 159 | 137 | 209 | 1.04e-22 | 94.0 |
| Msa0772140 | AT5G01200.1 | 38.514 | 148 | 68 | 5 | 31 | 159 | 71 | 214 | 3.16e-22 | 92.0 |
| Msa0772140 | AT3G11280.2 | 39.695 | 131 | 69 | 4 | 31 | 159 | 73 | 195 | 7.65e-22 | 90.9 |
| Msa0772140 | AT3G11280.1 | 39.695 | 131 | 69 | 4 | 31 | 159 | 73 | 195 | 7.65e-22 | 90.9 |
| Msa0772140 | AT5G04760.1 | 48.913 | 92 | 42 | 2 | 76 | 167 | 87 | 173 | 2.82e-21 | 88.6 |
| Msa0772140 | AT5G05790.2 | 38.346 | 133 | 74 | 4 | 31 | 159 | 71 | 199 | 9.78e-21 | 88.2 |
| Msa0772140 | AT5G05790.1 | 38.346 | 133 | 74 | 4 | 31 | 159 | 71 | 199 | 9.78e-21 | 88.2 |
| Msa0772140 | AT3G10580.2 | 36.364 | 132 | 66 | 4 | 37 | 168 | 56 | 169 | 1.36e-20 | 87.4 |
| Msa0772140 | AT3G10580.1 | 36.364 | 132 | 66 | 4 | 37 | 168 | 56 | 169 | 2.42e-20 | 87.4 |
| Msa0772140 | AT1G49010.1 | 47.126 | 87 | 42 | 2 | 80 | 165 | 126 | 209 | 9.18e-20 | 86.3 |
| Msa0772140 | AT5G61620.1 | 49.383 | 81 | 34 | 2 | 77 | 157 | 101 | 174 | 3.79e-19 | 84.7 |
| Msa0772140 | AT1G19000.2 | 41.739 | 115 | 58 | 3 | 83 | 197 | 97 | 202 | 6.47e-19 | 83.6 |
| Msa0772140 | AT1G19000.1 | 41.739 | 115 | 58 | 3 | 83 | 197 | 97 | 202 | 6.47e-19 | 83.6 |
| Msa0772140 | AT5G47390.1 | 36.066 | 122 | 65 | 3 | 50 | 171 | 65 | 173 | 2.52e-18 | 82.8 |
| Msa0772140 | AT5G56840.1 | 48.052 | 77 | 38 | 1 | 84 | 160 | 87 | 161 | 8.22e-18 | 79.7 |
| Msa0772140 | AT1G74840.2 | 56.250 | 64 | 28 | 0 | 71 | 134 | 79 | 142 | 8.54e-18 | 79.7 |
| Msa0772140 | AT1G74840.1 | 56.250 | 64 | 28 | 0 | 71 | 134 | 79 | 142 | 9.83e-18 | 80.1 |
| Msa0772140 | AT4G09450.1 | 36.885 | 122 | 60 | 3 | 37 | 158 | 54 | 158 | 2.92e-17 | 77.4 |
| Msa0772140 | AT3G10590.1 | 45.098 | 102 | 49 | 3 | 62 | 161 | 84 | 180 | 1.05e-16 | 76.3 |
| Msa0772140 | AT1G70000.1 | 42.553 | 94 | 49 | 2 | 82 | 175 | 92 | 180 | 2.43e-16 | 76.3 |
| Msa0772140 | AT1G70000.2 | 42.553 | 94 | 49 | 2 | 82 | 175 | 92 | 180 | 2.43e-16 | 76.3 |
| Msa0772140 | AT3G16350.1 | 43.023 | 86 | 49 | 0 | 50 | 135 | 99 | 184 | 4.06e-16 | 76.6 |
Find 42 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGTGTCATTGTTGTTTA+AGG | 0.102533 | 5_2:+46291601 | None:intergenic |
| GTCATTGTCCTTGTTATTTA+AGG | 0.115096 | 5_2:+46291526 | None:intergenic |
| TTTCTTCTTCTCTATTTCTT+TGG | 0.241888 | 5_2:+46291649 | None:intergenic |
| TCTCTATTTCTTTGGCAGTT+TGG | 0.295652 | 5_2:+46291657 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 5_2:+46291440 | None:intergenic |
| TTTGCTTCATGACTTCCTTC+TGG | 0.307695 | 5_2:+46293348 | None:intergenic |
| TGTCAAGTTTCTCTTGTTGT+TGG | 0.325112 | 5_2:+46293478 | None:intergenic |
| GCGCAACTTGTTTAACTTGT+TGG | 0.342312 | 5_2:-46291414 | Msa0772140:CDS |
| TGTTGGTCCATGCTATTCTC+AGG | 0.370831 | 5_2:+46293495 | None:intergenic |
| GATATGTAGGTCGTTTCTAC+AGG | 0.371977 | 5_2:-46291789 | Msa0772140:intron |
| ATGTTATCATCATTAGAGTT+TGG | 0.374150 | 5_2:+46293420 | None:intergenic |
| AGGCCAACTGATACATTTGT+TGG | 0.437602 | 5_2:+46291489 | None:intergenic |
| CTATTTCTTTGGCAGTTTGG+TGG | 0.446999 | 5_2:+46291660 | None:intergenic |
| TTGGCCTTGCTTTATCCAAT+CGG | 0.464369 | 5_2:-46291473 | Msa0772140:CDS |
| GACACTGATGTCGTTGAGTC+GGG | 0.467326 | 5_2:-46293459 | Msa0772140:CDS |
| GGCCAACTGATACATTTGTT+GGG | 0.476834 | 5_2:+46291490 | None:intergenic |
| GCATGACTAGCAATTTGAGT+TGG | 0.487768 | 5_2:+46291701 | None:intergenic |
| GTTGGTCCATGCTATTCTCA+GGG | 0.498294 | 5_2:+46293496 | None:intergenic |
| AAAGAGAGGGCGTAAGGAAA+GGG | 0.530997 | 5_2:-46293328 | Msa0772140:CDS |
| CAAAGAGAGGGCGTAAGGAA+AGG | 0.532803 | 5_2:-46293329 | Msa0772140:CDS |
| TCAGGAAGTGCAGTACCGAT+TGG | 0.538889 | 5_2:+46291458 | None:intergenic |
| ATATGTAGGTCGTTTCTACA+GGG | 0.546671 | 5_2:-46291788 | Msa0772140:intron |
| TGACACTGATGTCGTTGAGT+CGG | 0.546703 | 5_2:-46293460 | Msa0772140:CDS |
| TTTAAGGTAGCTGTGTCTTG+AGG | 0.565081 | 5_2:+46291542 | None:intergenic |
| TGAAGCAAAGAGAGGGCGTA+AGG | 0.567823 | 5_2:-46293334 | Msa0772140:CDS |
| CACAGCTACCTTAAATAACA+AGG | 0.577999 | 5_2:-46291534 | Msa0772140:CDS |
| AACCCAACAAATGTATCAGT+TGG | 0.579773 | 5_2:-46291492 | Msa0772140:CDS |
| GGCGTAAGGAAAGGGTACAT+TGG | 0.585151 | 5_2:-46293320 | Msa0772140:CDS |
| AAGGTAGCTGTGTCTTGAGG+AGG | 0.587982 | 5_2:+46291545 | None:intergenic |
| TAAGGAAAGGGTACATTGGA+CGG | 0.593107 | 5_2:-46293316 | Msa0772140:CDS |
| GAAAGGGTACATTGGACGGA+AGG | 0.614122 | 5_2:-46293312 | Msa0772140:CDS |
| TTGGTCCATGCTATTCTCAG+GGG | 0.618470 | 5_2:+46293497 | None:intergenic |
| TGGTCCATGCTATTCTCAGG+GGG | 0.624422 | 5_2:+46293498 | None:intergenic |
| ATTAGAGTTTGGAATTGCGA+CGG | 0.624770 | 5_2:+46293431 | None:intergenic |
| ATCATATTGATCTAAATGAG+AGG | 0.625540 | 5_2:-46293536 | Msa0772140:CDS |
| GAAGTCATGAAGCAAAGAGA+GGG | 0.628581 | 5_2:-46293341 | Msa0772140:CDS |
| GGAAGTCATGAAGCAAAGAG+AGG | 0.629765 | 5_2:-46293342 | Msa0772140:CDS |
| CAAGCTGAGTCAGTACCAGA+AGG | 0.630435 | 5_2:-46293363 | Msa0772140:CDS |
| ATGTAGGTCGTTTCTACAGG+GGG | 0.657825 | 5_2:-46291786 | Msa0772140:intron |
| TCATTTAGATCAATATGATG+AGG | 0.665709 | 5_2:+46293540 | None:intergenic |
| AGTACCGATTGGATAAAGCA+AGG | 0.686649 | 5_2:+46291469 | None:intergenic |
| TATGTAGGTCGTTTCTACAG+GGG | 0.695640 | 5_2:-46291787 | Msa0772140:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATTATAATTCTATTT+AGG | - | chr5_2:46291714-46291733 | Msa0772140:CDS | 10.0% |
| !! | ATACATTATAATTCTATTTA+GGG | - | chr5_2:46291715-46291734 | Msa0772140:CDS | 10.0% |
| !!! | TTGAAATTTTATAAAATTTG+TGG | - | chr5_2:46291787-46291806 | Msa0772140:intron | 10.0% |
| !!! | TGAAATTTTATAAAATTTGT+GGG | - | chr5_2:46291788-46291807 | Msa0772140:intron | 10.0% |
| !! | TATTTATTATATTCTCTATT+TGG | - | chr5_2:46291894-46291913 | Msa0772140:intron | 10.0% |
| !!! | ATATTGATAATATTAATTAG+TGG | - | chr5_2:46292338-46292357 | Msa0772140:intron | 10.0% |
| !!! | AAATATATTTTTGTTCATAT+AGG | - | chr5_2:46293009-46293028 | Msa0772140:intron | 10.0% |
| !! | TATACATTATAATTCTATTT+AGG | - | chr5_2:46291714-46291733 | Msa0772140:CDS | 10.0% |
| !! | ATACATTATAATTCTATTTA+GGG | - | chr5_2:46291715-46291734 | Msa0772140:CDS | 10.0% |
| !!! | TTGAAATTTTATAAAATTTG+TGG | - | chr5_2:46291787-46291806 | Msa0772140:intron | 10.0% |
| !!! | TGAAATTTTATAAAATTTGT+GGG | - | chr5_2:46291788-46291807 | Msa0772140:intron | 10.0% |
| !! | TATTTATTATATTCTCTATT+TGG | - | chr5_2:46291894-46291913 | Msa0772140:intron | 10.0% |
| !!! | ATATTGATAATATTAATTAG+TGG | - | chr5_2:46292338-46292357 | Msa0772140:intron | 10.0% |
| !!! | AAATATATTTTTGTTCATAT+AGG | - | chr5_2:46293009-46293028 | Msa0772140:intron | 10.0% |
| !! | ATTATAATGTATATATTCCA+AGG | + | chr5_2:46291707-46291726 | None:intergenic | 15.0% |
| !!! | GAAATTTTATAAAATTTGTG+GGG | - | chr5_2:46291789-46291808 | Msa0772140:intron | 15.0% |
| !! | TAAATATCTCTATAGATAAA+AGG | + | chr5_2:46292293-46292312 | None:intergenic | 15.0% |
| !!! | ATAAATAAGGGTATAATAAT+GGG | + | chr5_2:46292823-46292842 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr5_2:46292824-46292843 | None:intergenic | 15.0% |
| !! | AAAATGAAGTAACTATATAT+TGG | + | chr5_2:46293123-46293142 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGTGATATGT+AGG | - | chr5_2:46293165-46293184 | Msa0772140:intron | 15.0% |
| !! | ATTATAATGTATATATTCCA+AGG | + | chr5_2:46291707-46291726 | None:intergenic | 15.0% |
| !!! | GAAATTTTATAAAATTTGTG+GGG | - | chr5_2:46291789-46291808 | Msa0772140:intron | 15.0% |
| !! | TAAATATCTCTATAGATAAA+AGG | + | chr5_2:46292293-46292312 | None:intergenic | 15.0% |
| !!! | ATAAATAAGGGTATAATAAT+GGG | + | chr5_2:46292823-46292842 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr5_2:46292824-46292843 | None:intergenic | 15.0% |
| !! | AAAATGAAGTAACTATATAT+TGG | + | chr5_2:46293123-46293142 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGTGATATGT+AGG | - | chr5_2:46293165-46293184 | Msa0772140:intron | 15.0% |
| !! | TGTAGATTATTCCTATAAAA+GGG | + | chr5_2:46292198-46292217 | None:intergenic | 20.0% |
| !! | TTGTAGATTATTCCTATAAA+AGG | + | chr5_2:46292199-46292218 | None:intergenic | 20.0% |
| !! | TCTATAGATAAAAGGTAATT+GGG | + | chr5_2:46292285-46292304 | None:intergenic | 20.0% |
| !! | AATTTGTAGATAGTGTATTT+AGG | - | chr5_2:46292396-46292415 | Msa0772140:intron | 20.0% |
| !! | TCTAAATACTACAAAAAATG+TGG | + | chr5_2:46292546-46292565 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr5_2:46292799-46292818 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr5_2:46292835-46292854 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr5_2:46292836-46292855 | None:intergenic | 20.0% |
| !! | TGTAGATTATTCCTATAAAA+GGG | + | chr5_2:46292198-46292217 | None:intergenic | 20.0% |
| !! | TTGTAGATTATTCCTATAAA+AGG | + | chr5_2:46292199-46292218 | None:intergenic | 20.0% |
| !! | TCTATAGATAAAAGGTAATT+GGG | + | chr5_2:46292285-46292304 | None:intergenic | 20.0% |
| !! | AATTTGTAGATAGTGTATTT+AGG | - | chr5_2:46292396-46292415 | Msa0772140:intron | 20.0% |
| !! | TCTAAATACTACAAAAAATG+TGG | + | chr5_2:46292546-46292565 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr5_2:46292799-46292818 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr5_2:46292835-46292854 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr5_2:46292836-46292855 | None:intergenic | 20.0% |
| ! | TCATTTAGATCAATATGATG+AGG | + | chr5_2:46291430-46291449 | None:intergenic | 25.0% |
| ! | ATCATATTGATCTAAATGAG+AGG | - | chr5_2:46291431-46291450 | Msa0772140:CDS | 25.0% |
| ! | ATGTTATCATCATTAGAGTT+TGG | + | chr5_2:46291550-46291569 | None:intergenic | 25.0% |
| ! | GCAAATTTAATCTTAGAGTA+AGG | - | chr5_2:46292020-46292039 | Msa0772140:intron | 25.0% |
| ! | CTCTATAGATAAAAGGTAAT+TGG | + | chr5_2:46292286-46292305 | None:intergenic | 25.0% |
| ! | TGCAAAGTAGACTTATAAAA+AGG | - | chr5_2:46292438-46292457 | Msa0772140:intron | 25.0% |
| ! | GCAAAGTAGACTTATAAAAA+GGG | - | chr5_2:46292439-46292458 | Msa0772140:intron | 25.0% |
| ! | CCTTTATTAATTGTAGTTAG+TGG | + | chr5_2:46292870-46292889 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+AGG | - | chr5_2:46292867-46292886 | Msa0772140:intron | 25.0% |
| !!! | ATTGATTGTGTTGATTTCAA+TGG | + | chr5_2:46292919-46292938 | None:intergenic | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | + | chr5_2:46292967-46292986 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | - | chr5_2:46292968-46292987 | Msa0772140:intron | 25.0% |
| !! | TTTCTTCTTCTCTATTTCTT+TGG | + | chr5_2:46293321-46293340 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTGTTTTTCAAGA+GGG | + | chr5_2:46293400-46293419 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTGTTTTTCAAG+AGG | + | chr5_2:46293401-46293420 | None:intergenic | 25.0% |
| ! | TCATTTAGATCAATATGATG+AGG | + | chr5_2:46291430-46291449 | None:intergenic | 25.0% |
| ! | ATCATATTGATCTAAATGAG+AGG | - | chr5_2:46291431-46291450 | Msa0772140:CDS | 25.0% |
| ! | ATGTTATCATCATTAGAGTT+TGG | + | chr5_2:46291550-46291569 | None:intergenic | 25.0% |
| ! | GCAAATTTAATCTTAGAGTA+AGG | - | chr5_2:46292020-46292039 | Msa0772140:intron | 25.0% |
| ! | CTCTATAGATAAAAGGTAAT+TGG | + | chr5_2:46292286-46292305 | None:intergenic | 25.0% |
| ! | TGCAAAGTAGACTTATAAAA+AGG | - | chr5_2:46292438-46292457 | Msa0772140:intron | 25.0% |
| ! | GCAAAGTAGACTTATAAAAA+GGG | - | chr5_2:46292439-46292458 | Msa0772140:intron | 25.0% |
| ! | CCTTTATTAATTGTAGTTAG+TGG | + | chr5_2:46292870-46292889 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+AGG | - | chr5_2:46292867-46292886 | Msa0772140:intron | 25.0% |
| !!! | ATTGATTGTGTTGATTTCAA+TGG | + | chr5_2:46292919-46292938 | None:intergenic | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | + | chr5_2:46292967-46292986 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | - | chr5_2:46292968-46292987 | Msa0772140:intron | 25.0% |
| !! | TTTCTTCTTCTCTATTTCTT+TGG | + | chr5_2:46293321-46293340 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTGTTTTTCAAGA+GGG | + | chr5_2:46293400-46293419 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTGTTTTTCAAG+AGG | + | chr5_2:46293401-46293420 | None:intergenic | 25.0% |
| GTAAGTATTCAATCTATCCT+TGG | - | chr5_2:46291687-46291706 | Msa0772140:CDS | 30.0% | |
| AACAAACAGATACAAAGACT+GGG | + | chr5_2:46291872-46291891 | None:intergenic | 30.0% | |
| AAACAAACAGATACAAAGAC+TGG | + | chr5_2:46291873-46291892 | None:intergenic | 30.0% | |
| !!! | TGAGTATCAATTTTGGAGTA+AGG | + | chr5_2:46292169-46292188 | None:intergenic | 30.0% |
| GGAATAATCTACAAAAATCG+AGG | - | chr5_2:46292205-46292224 | Msa0772140:intron | 30.0% | |
| AGTAGACTTATAAAAAGGGA+CGG | - | chr5_2:46292443-46292462 | Msa0772140:intron | 30.0% | |
| ATTAGCTATGTGATGACAAT+TGG | + | chr5_2:46292617-46292636 | None:intergenic | 30.0% | |
| AAGAGACTATTATTGTGAGA+CGG | + | chr5_2:46292733-46292752 | None:intergenic | 30.0% | |
| TTGAATATCAGTAAAGTCAG+AGG | - | chr5_2:46293052-46293071 | Msa0772140:intron | 30.0% | |
| !! | TACTGTGTCATTGTTGTTTA+AGG | + | chr5_2:46293369-46293388 | None:intergenic | 30.0% |
| !! | GTCATTGTCCTTGTTATTTA+AGG | + | chr5_2:46293444-46293463 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | + | chr5_2:46293530-46293549 | None:intergenic | 30.0% |
| GTAAGTATTCAATCTATCCT+TGG | - | chr5_2:46291687-46291706 | Msa0772140:CDS | 30.0% | |
| AACAAACAGATACAAAGACT+GGG | + | chr5_2:46291872-46291891 | None:intergenic | 30.0% | |
| AAACAAACAGATACAAAGAC+TGG | + | chr5_2:46291873-46291892 | None:intergenic | 30.0% | |
| !!! | TGAGTATCAATTTTGGAGTA+AGG | + | chr5_2:46292169-46292188 | None:intergenic | 30.0% |
| GGAATAATCTACAAAAATCG+AGG | - | chr5_2:46292205-46292224 | Msa0772140:intron | 30.0% | |
| AGTAGACTTATAAAAAGGGA+CGG | - | chr5_2:46292443-46292462 | Msa0772140:intron | 30.0% | |
| ATTAGCTATGTGATGACAAT+TGG | + | chr5_2:46292617-46292636 | None:intergenic | 30.0% | |
| AAGAGACTATTATTGTGAGA+CGG | + | chr5_2:46292733-46292752 | None:intergenic | 30.0% | |
| TTGAATATCAGTAAAGTCAG+AGG | - | chr5_2:46293052-46293071 | Msa0772140:intron | 30.0% | |
| !! | TACTGTGTCATTGTTGTTTA+AGG | + | chr5_2:46293369-46293388 | None:intergenic | 30.0% |
| !! | GTCATTGTCCTTGTTATTTA+AGG | + | chr5_2:46293444-46293463 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | + | chr5_2:46293530-46293549 | None:intergenic | 30.0% |
| ! | TGTCAAGTTTCTCTTGTTGT+TGG | + | chr5_2:46291492-46291511 | None:intergenic | 35.0% |
| ! | ATTAGAGTTTGGAATTGCGA+CGG | + | chr5_2:46291539-46291558 | None:intergenic | 35.0% |
| TATATACTCGTATACCCGTT+TGG | - | chr5_2:46291818-46291837 | Msa0772140:intron | 35.0% | |
| ATATACTCGTATACCCGTTT+GGG | - | chr5_2:46291819-46291838 | Msa0772140:intron | 35.0% | |
| ! | ACTTTTCTCCGAATAGAGTA+GGG | - | chr5_2:46292045-46292064 | Msa0772140:intron | 35.0% |
| CTCATCTTCACTCTATACTA+AGG | - | chr5_2:46292134-46292153 | Msa0772140:intron | 35.0% | |
| ! | GACAGAGTGAGTATCAATTT+TGG | + | chr5_2:46292176-46292195 | None:intergenic | 35.0% |
| ACATGTGTCTAGGTTTAGAT+TGG | + | chr5_2:46292675-46292694 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr5_2:46292856-46292875 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | - | chr5_2:46292972-46292991 | Msa0772140:intron | 35.0% | |
| ! | TGCAAGTGTTTGCATTGTTT+TGG | - | chr5_2:46293088-46293107 | Msa0772140:intron | 35.0% |
| ! | GCAAGTGTTTGCATTGTTTT+GGG | - | chr5_2:46293089-46293108 | Msa0772140:intron | 35.0% |
| ATATGTAGGTCGTTTCTACA+GGG | - | chr5_2:46293179-46293198 | Msa0772140:intron | 35.0% | |
| ! | TCTCTATTTCTTTGGCAGTT+TGG | + | chr5_2:46293313-46293332 | None:intergenic | 35.0% |
| CACAGCTACCTTAAATAACA+AGG | - | chr5_2:46293433-46293452 | Msa0772140:CDS | 35.0% | |
| AACCCAACAAATGTATCAGT+TGG | - | chr5_2:46293475-46293494 | Msa0772140:CDS | 35.0% | |
| ! | TGTCAAGTTTCTCTTGTTGT+TGG | + | chr5_2:46291492-46291511 | None:intergenic | 35.0% |
| ! | ATTAGAGTTTGGAATTGCGA+CGG | + | chr5_2:46291539-46291558 | None:intergenic | 35.0% |
| TATATACTCGTATACCCGTT+TGG | - | chr5_2:46291818-46291837 | Msa0772140:intron | 35.0% | |
| ATATACTCGTATACCCGTTT+GGG | - | chr5_2:46291819-46291838 | Msa0772140:intron | 35.0% | |
| ! | ACTTTTCTCCGAATAGAGTA+GGG | - | chr5_2:46292045-46292064 | Msa0772140:intron | 35.0% |
| CTCATCTTCACTCTATACTA+AGG | - | chr5_2:46292134-46292153 | Msa0772140:intron | 35.0% | |
| ! | GACAGAGTGAGTATCAATTT+TGG | + | chr5_2:46292176-46292195 | None:intergenic | 35.0% |
| ACATGTGTCTAGGTTTAGAT+TGG | + | chr5_2:46292675-46292694 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr5_2:46292856-46292875 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | - | chr5_2:46292972-46292991 | Msa0772140:intron | 35.0% | |
| ! | TGCAAGTGTTTGCATTGTTT+TGG | - | chr5_2:46293088-46293107 | Msa0772140:intron | 35.0% |
| ! | GCAAGTGTTTGCATTGTTTT+GGG | - | chr5_2:46293089-46293108 | Msa0772140:intron | 35.0% |
| ATATGTAGGTCGTTTCTACA+GGG | - | chr5_2:46293179-46293198 | Msa0772140:intron | 35.0% | |
| ! | TCTCTATTTCTTTGGCAGTT+TGG | + | chr5_2:46293313-46293332 | None:intergenic | 35.0% |
| CACAGCTACCTTAAATAACA+AGG | - | chr5_2:46293433-46293452 | Msa0772140:CDS | 35.0% | |
| AACCCAACAAATGTATCAGT+TGG | - | chr5_2:46293475-46293494 | Msa0772140:CDS | 35.0% | |
| TTTGCTTCATGACTTCCTTC+TGG | + | chr5_2:46291622-46291641 | None:intergenic | 40.0% | |
| GAAGTCATGAAGCAAAGAGA+GGG | - | chr5_2:46291626-46291645 | Msa0772140:CDS | 40.0% | |
| ! | TAAGGAAAGGGTACATTGGA+CGG | - | chr5_2:46291651-46291670 | Msa0772140:CDS | 40.0% |
| AAACAGATACAAAGACTGGG+AGG | + | chr5_2:46291869-46291888 | None:intergenic | 40.0% | |
| ! | GACTTTTCTCCGAATAGAGT+AGG | - | chr5_2:46292044-46292063 | Msa0772140:intron | 40.0% |
| CAACTCATCCCTACTCTATT+CGG | + | chr5_2:46292056-46292075 | None:intergenic | 40.0% | |
| ! | ACTCACTCTGTCCCTTTTAT+AGG | - | chr5_2:46292184-46292203 | Msa0772140:intron | 40.0% |
| AGACTTATAAAAAGGGACGG+AGG | - | chr5_2:46292446-46292465 | Msa0772140:intron | 40.0% | |
| AGCTAATGACTAGACACTCA+AGG | - | chr5_2:46292630-46292649 | Msa0772140:intron | 40.0% | |
| GCTAATGACTAGACACTCAA+GGG | - | chr5_2:46292631-46292650 | Msa0772140:intron | 40.0% | |
| CCTAGACACATGTAGAACAA+CGG | - | chr5_2:46292682-46292701 | Msa0772140:intron | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | + | chr5_2:46292729-46292748 | None:intergenic | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | + | chr5_2:46292730-46292749 | None:intergenic | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | + | chr5_2:46292947-46292966 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | + | chr5_2:46292956-46292975 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | - | chr5_2:46292971-46292990 | Msa0772140:intron | 40.0% | |
| GATATGTAGGTCGTTTCTAC+AGG | - | chr5_2:46293178-46293197 | Msa0772140:intron | 40.0% | |
| TATGTAGGTCGTTTCTACAG+GGG | - | chr5_2:46293180-46293199 | Msa0772140:intron | 40.0% | |
| GCATGACTAGCAATTTGAGT+TGG | + | chr5_2:46293269-46293288 | None:intergenic | 40.0% | |
| ! | CTATTTCTTTGGCAGTTTGG+TGG | + | chr5_2:46293310-46293329 | None:intergenic | 40.0% |
| ! | TTTAAGGTAGCTGTGTCTTG+AGG | + | chr5_2:46293428-46293447 | None:intergenic | 40.0% |
| GGCCAACTGATACATTTGTT+GGG | + | chr5_2:46293480-46293499 | None:intergenic | 40.0% | |
| AGGCCAACTGATACATTTGT+TGG | + | chr5_2:46293481-46293500 | None:intergenic | 40.0% | |
| !! | TTGGCCTTGCTTTATCCAAT+CGG | - | chr5_2:46293494-46293513 | Msa0772140:CDS | 40.0% |
| !! | AGTACCGATTGGATAAAGCA+AGG | + | chr5_2:46293501-46293520 | None:intergenic | 40.0% |
| !! | GCGCAACTTGTTTAACTTGT+TGG | - | chr5_2:46293553-46293572 | Msa0772140:CDS | 40.0% |
| TTTGCTTCATGACTTCCTTC+TGG | + | chr5_2:46291622-46291641 | None:intergenic | 40.0% | |
| GAAGTCATGAAGCAAAGAGA+GGG | - | chr5_2:46291626-46291645 | Msa0772140:CDS | 40.0% | |
| ! | TAAGGAAAGGGTACATTGGA+CGG | - | chr5_2:46291651-46291670 | Msa0772140:CDS | 40.0% |
| AAACAGATACAAAGACTGGG+AGG | + | chr5_2:46291869-46291888 | None:intergenic | 40.0% | |
| ! | GACTTTTCTCCGAATAGAGT+AGG | - | chr5_2:46292044-46292063 | Msa0772140:intron | 40.0% |
| CAACTCATCCCTACTCTATT+CGG | + | chr5_2:46292056-46292075 | None:intergenic | 40.0% | |
| ! | ACTCACTCTGTCCCTTTTAT+AGG | - | chr5_2:46292184-46292203 | Msa0772140:intron | 40.0% |
| AGACTTATAAAAAGGGACGG+AGG | - | chr5_2:46292446-46292465 | Msa0772140:intron | 40.0% | |
| AGCTAATGACTAGACACTCA+AGG | - | chr5_2:46292630-46292649 | Msa0772140:intron | 40.0% | |
| GCTAATGACTAGACACTCAA+GGG | - | chr5_2:46292631-46292650 | Msa0772140:intron | 40.0% | |
| CCTAGACACATGTAGAACAA+CGG | - | chr5_2:46292682-46292701 | Msa0772140:intron | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | + | chr5_2:46292729-46292748 | None:intergenic | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | + | chr5_2:46292730-46292749 | None:intergenic | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | + | chr5_2:46292947-46292966 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | + | chr5_2:46292956-46292975 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | - | chr5_2:46292971-46292990 | Msa0772140:intron | 40.0% | |
| GATATGTAGGTCGTTTCTAC+AGG | - | chr5_2:46293178-46293197 | Msa0772140:intron | 40.0% | |
| TATGTAGGTCGTTTCTACAG+GGG | - | chr5_2:46293180-46293199 | Msa0772140:intron | 40.0% | |
| GCATGACTAGCAATTTGAGT+TGG | + | chr5_2:46293269-46293288 | None:intergenic | 40.0% | |
| ! | CTATTTCTTTGGCAGTTTGG+TGG | + | chr5_2:46293310-46293329 | None:intergenic | 40.0% |
| ! | TTTAAGGTAGCTGTGTCTTG+AGG | + | chr5_2:46293428-46293447 | None:intergenic | 40.0% |
| GGCCAACTGATACATTTGTT+GGG | + | chr5_2:46293480-46293499 | None:intergenic | 40.0% | |
| AGGCCAACTGATACATTTGT+TGG | + | chr5_2:46293481-46293500 | None:intergenic | 40.0% | |
| !! | TTGGCCTTGCTTTATCCAAT+CGG | - | chr5_2:46293494-46293513 | Msa0772140:CDS | 40.0% |
| !! | AGTACCGATTGGATAAAGCA+AGG | + | chr5_2:46293501-46293520 | None:intergenic | 40.0% |
| !! | GCGCAACTTGTTTAACTTGT+TGG | - | chr5_2:46293553-46293572 | Msa0772140:CDS | 40.0% |
| TTGGTCCATGCTATTCTCAG+GGG | + | chr5_2:46291473-46291492 | None:intergenic | 45.0% | |
| GTTGGTCCATGCTATTCTCA+GGG | + | chr5_2:46291474-46291493 | None:intergenic | 45.0% | |
| TGTTGGTCCATGCTATTCTC+AGG | + | chr5_2:46291475-46291494 | None:intergenic | 45.0% | |
| TGACACTGATGTCGTTGAGT+CGG | - | chr5_2:46291507-46291526 | Msa0772140:CDS | 45.0% | |
| GGAAGTCATGAAGCAAAGAG+AGG | - | chr5_2:46291625-46291644 | Msa0772140:CDS | 45.0% | |
| ! | AAAGAGAGGGCGTAAGGAAA+GGG | - | chr5_2:46291639-46291658 | Msa0772140:CDS | 45.0% |
| ! | ATACCCGTTTGGGTTAATCC+TGG | - | chr5_2:46291829-46291848 | Msa0772140:intron | 45.0% |
| ! | TACCCGTTTGGGTTAATCCT+GGG | - | chr5_2:46291830-46291849 | Msa0772140:intron | 45.0% |
| TGACCCAGGATTAACCCAAA+CGG | + | chr5_2:46291836-46291855 | None:intergenic | 45.0% | |
| TACAAAGACTGGGAGGACAT+TGG | + | chr5_2:46291862-46291881 | None:intergenic | 45.0% | |
| AATGACTAGACACTCAAGGG+TGG | - | chr5_2:46292634-46292653 | Msa0772140:intron | 45.0% | |
| CCGTTGTTCTACATGTGTCT+AGG | + | chr5_2:46292685-46292704 | None:intergenic | 45.0% | |
| ATGTAGGTCGTTTCTACAGG+GGG | - | chr5_2:46293181-46293200 | Msa0772140:intron | 45.0% | |
| CTACAGGGGGTGAAAAAACA+TGG | - | chr5_2:46293194-46293213 | Msa0772140:intron | 45.0% | |
| AGGGGGTGAAAAAACATGGT+AGG | - | chr5_2:46293198-46293217 | Msa0772140:intron | 45.0% | |
| GGGGGTGAAAAAACATGGTA+GGG | - | chr5_2:46293199-46293218 | Msa0772140:intron | 45.0% | |
| GGGGTGAAAAAACATGGTAG+GGG | - | chr5_2:46293200-46293219 | Msa0772140:intron | 45.0% | |
| AAAAACATGGTAGGGGACGT+TGG | - | chr5_2:46293207-46293226 | Msa0772140:intron | 45.0% | |
| TTGGTCCATGCTATTCTCAG+GGG | + | chr5_2:46291473-46291492 | None:intergenic | 45.0% | |
| GTTGGTCCATGCTATTCTCA+GGG | + | chr5_2:46291474-46291493 | None:intergenic | 45.0% | |
| TGTTGGTCCATGCTATTCTC+AGG | + | chr5_2:46291475-46291494 | None:intergenic | 45.0% | |
| TGACACTGATGTCGTTGAGT+CGG | - | chr5_2:46291507-46291526 | Msa0772140:CDS | 45.0% | |
| GGAAGTCATGAAGCAAAGAG+AGG | - | chr5_2:46291625-46291644 | Msa0772140:CDS | 45.0% | |
| ! | AAAGAGAGGGCGTAAGGAAA+GGG | - | chr5_2:46291639-46291658 | Msa0772140:CDS | 45.0% |
| ! | ATACCCGTTTGGGTTAATCC+TGG | - | chr5_2:46291829-46291848 | Msa0772140:intron | 45.0% |
| ! | TACCCGTTTGGGTTAATCCT+GGG | - | chr5_2:46291830-46291849 | Msa0772140:intron | 45.0% |
| TGACCCAGGATTAACCCAAA+CGG | + | chr5_2:46291836-46291855 | None:intergenic | 45.0% | |
| TACAAAGACTGGGAGGACAT+TGG | + | chr5_2:46291862-46291881 | None:intergenic | 45.0% | |
| AATGACTAGACACTCAAGGG+TGG | - | chr5_2:46292634-46292653 | Msa0772140:intron | 45.0% | |
| CCGTTGTTCTACATGTGTCT+AGG | + | chr5_2:46292685-46292704 | None:intergenic | 45.0% | |
| ATGTAGGTCGTTTCTACAGG+GGG | - | chr5_2:46293181-46293200 | Msa0772140:intron | 45.0% | |
| CTACAGGGGGTGAAAAAACA+TGG | - | chr5_2:46293194-46293213 | Msa0772140:intron | 45.0% | |
| AGGGGGTGAAAAAACATGGT+AGG | - | chr5_2:46293198-46293217 | Msa0772140:intron | 45.0% | |
| GGGGGTGAAAAAACATGGTA+GGG | - | chr5_2:46293199-46293218 | Msa0772140:intron | 45.0% | |
| GGGGTGAAAAAACATGGTAG+GGG | - | chr5_2:46293200-46293219 | Msa0772140:intron | 45.0% | |
| AAAAACATGGTAGGGGACGT+TGG | - | chr5_2:46293207-46293226 | Msa0772140:intron | 45.0% | |
| AGATCCCCCTGAGAATAGCA+TGG | - | chr5_2:46291465-46291484 | Msa0772140:CDS | 50.0% | |
| TGGTCCATGCTATTCTCAGG+GGG | + | chr5_2:46291472-46291491 | None:intergenic | 50.0% | |
| GACACTGATGTCGTTGAGTC+GGG | - | chr5_2:46291508-46291527 | Msa0772140:CDS | 50.0% | |
| CAAGCTGAGTCAGTACCAGA+AGG | - | chr5_2:46291604-46291623 | Msa0772140:CDS | 50.0% | |
| ! | TGAAGCAAAGAGAGGGCGTA+AGG | - | chr5_2:46291633-46291652 | Msa0772140:CDS | 50.0% |
| ! | CAAAGAGAGGGCGTAAGGAA+AGG | - | chr5_2:46291638-46291657 | Msa0772140:CDS | 50.0% |
| ! | GGCGTAAGGAAAGGGTACAT+TGG | - | chr5_2:46291647-46291666 | Msa0772140:CDS | 50.0% |
| ! | GAAAGGGTACATTGGACGGA+AGG | - | chr5_2:46291655-46291674 | Msa0772140:CDS | 50.0% |
| GACCCAGGATTAACCCAAAC+GGG | + | chr5_2:46291835-46291854 | None:intergenic | 50.0% | |
| ! | GTTTGGGTTAATCCTGGGTC+AGG | - | chr5_2:46291835-46291854 | Msa0772140:intron | 50.0% |
| AAGGTAGCTGTGTCTTGAGG+AGG | + | chr5_2:46293425-46293444 | None:intergenic | 50.0% | |
| !! | TCAGGAAGTGCAGTACCGAT+TGG | + | chr5_2:46293512-46293531 | None:intergenic | 50.0% |
| AGATCCCCCTGAGAATAGCA+TGG | - | chr5_2:46291465-46291484 | Msa0772140:CDS | 50.0% | |
| TGGTCCATGCTATTCTCAGG+GGG | + | chr5_2:46291472-46291491 | None:intergenic | 50.0% | |
| GACACTGATGTCGTTGAGTC+GGG | - | chr5_2:46291508-46291527 | Msa0772140:CDS | 50.0% | |
| CAAGCTGAGTCAGTACCAGA+AGG | - | chr5_2:46291604-46291623 | Msa0772140:CDS | 50.0% | |
| ! | TGAAGCAAAGAGAGGGCGTA+AGG | - | chr5_2:46291633-46291652 | Msa0772140:CDS | 50.0% |
| ! | CAAAGAGAGGGCGTAAGGAA+AGG | - | chr5_2:46291638-46291657 | Msa0772140:CDS | 50.0% |
| ! | GGCGTAAGGAAAGGGTACAT+TGG | - | chr5_2:46291647-46291666 | Msa0772140:CDS | 50.0% |
| ! | GAAAGGGTACATTGGACGGA+AGG | - | chr5_2:46291655-46291674 | Msa0772140:CDS | 50.0% |
| GACCCAGGATTAACCCAAAC+GGG | + | chr5_2:46291835-46291854 | None:intergenic | 50.0% | |
| ! | GTTTGGGTTAATCCTGGGTC+AGG | - | chr5_2:46291835-46291854 | Msa0772140:intron | 50.0% |
| AAGGTAGCTGTGTCTTGAGG+AGG | + | chr5_2:46293425-46293444 | None:intergenic | 50.0% | |
| !! | TCAGGAAGTGCAGTACCGAT+TGG | + | chr5_2:46293512-46293531 | None:intergenic | 50.0% |
| GACACTCAAGGGTGGAGAAC+TGG | - | chr5_2:46292642-46292661 | Msa0772140:intron | 55.0% | |
| GACACTCAAGGGTGGAGAAC+TGG | - | chr5_2:46292642-46292661 | Msa0772140:intron | 55.0% | |
| GAGGACATTGGACCTGACCC+AGG | + | chr5_2:46291850-46291869 | None:intergenic | 60.0% | |
| GAGGACATTGGACCTGACCC+AGG | + | chr5_2:46291850-46291869 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 46291400 | 46293589 | 46291400 | ID=Msa0772140;Name=Msa0772140 |
| chr5_2 | mRNA | 46291400 | 46293589 | 46291400 | ID=Msa0772140-mRNA-1;Parent=Msa0772140;Name=Msa0772140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|229 |
| chr5_2 | exon | 46293303 | 46293589 | 46293303 | ID=Msa0772140-mRNA-1:exon:13882;Parent=Msa0772140-mRNA-1 |
| chr5_2 | exon | 46291400 | 46291802 | 46291400 | ID=Msa0772140-mRNA-1:exon:13881;Parent=Msa0772140-mRNA-1 |
| chr5_2 | CDS | 46293303 | 46293589 | 46293303 | ID=Msa0772140-mRNA-1:cds;Parent=Msa0772140-mRNA-1 |
| chr5_2 | CDS | 46291400 | 46291802 | 46291400 | ID=Msa0772140-mRNA-1:cds;Parent=Msa0772140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
