Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773330 | sp|O22873|BZP18_ARATH | 60.215 | 186 | 51 | 4 | 3 | 172 | 48 | 226 | 5.77e-59 | 194 |
| Msa0773330 | sp|O22873|BZP18_ARATH | 42.268 | 97 | 33 | 3 | 172 | 249 | 64 | 156 | 2.15e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773330 | G7K0T5 | 79.487 | 78 | 16 | 0 | 172 | 249 | 90 | 167 | 3.20e-34 | 136 |
| Msa0773330 | G7K0T5 | 86.047 | 172 | 24 | 0 | 1 | 172 | 66 | 237 | 4.28e-96 | 295 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0773330 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773330 | MtrunA17_Chr5g0432701 | 86.047 | 172 | 24 | 0 | 1 | 172 | 66 | 237 | 8.25e-100 | 295 |
| Msa0773330 | MtrunA17_Chr5g0432701 | 79.487 | 78 | 16 | 0 | 172 | 249 | 90 | 167 | 6.17e-38 | 136 |
| Msa0773330 | MtrunA17_Chr3g0107491 | 60.185 | 216 | 49 | 5 | 1 | 181 | 53 | 266 | 1.06e-73 | 229 |
| Msa0773330 | MtrunA17_Chr3g0107491 | 41.818 | 110 | 30 | 4 | 172 | 249 | 78 | 185 | 3.16e-15 | 74.3 |
| Msa0773330 | MtrunA17_Chr3g0128781 | 61.905 | 147 | 49 | 1 | 26 | 172 | 47 | 186 | 2.46e-50 | 167 |
| Msa0773330 | MtrunA17_Chr2g0329551 | 48.705 | 193 | 55 | 4 | 24 | 172 | 107 | 299 | 4.74e-42 | 148 |
| Msa0773330 | MtrunA17_Chr6g0463571 | 59.231 | 130 | 50 | 3 | 46 | 173 | 102 | 230 | 8.11e-37 | 132 |
| Msa0773330 | MtrunA17_Chr4g0036071 | 70.213 | 94 | 28 | 0 | 79 | 172 | 345 | 438 | 1.52e-33 | 127 |
| Msa0773330 | MtrunA17_Chr1g0156051 | 56.897 | 116 | 50 | 0 | 79 | 194 | 372 | 487 | 1.92e-20 | 90.1 |
| Msa0773330 | MtrunA17_Chr1g0202051 | 38.017 | 121 | 70 | 3 | 38 | 158 | 73 | 188 | 3.73e-13 | 67.8 |
| Msa0773330 | MtrunA17_Chr2g0325131 | 46.250 | 80 | 43 | 0 | 93 | 172 | 190 | 269 | 7.52e-13 | 67.4 |
| Msa0773330 | MtrunA17_Chr2g0316551 | 47.297 | 74 | 39 | 0 | 93 | 166 | 207 | 280 | 3.46e-12 | 65.5 |
| Msa0773330 | MtrunA17_Chr4g0040891 | 45.946 | 74 | 40 | 0 | 93 | 166 | 193 | 266 | 1.34e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773330 | AT2G40620.1 | 60.215 | 186 | 51 | 4 | 3 | 172 | 48 | 226 | 5.87e-60 | 194 |
| Msa0773330 | AT2G40620.1 | 42.268 | 97 | 33 | 3 | 172 | 249 | 64 | 156 | 2.19e-12 | 66.6 |
| Msa0773330 | AT1G06850.1 | 55.696 | 158 | 55 | 3 | 29 | 172 | 70 | 226 | 9.80e-48 | 161 |
| Msa0773330 | AT2G31370.5 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 9.03e-43 | 149 |
| Msa0773330 | AT2G31370.2 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT2G31370.4 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT2G31370.1 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT2G31370.7 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT2G31370.3 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT2G31370.6 | 50.267 | 187 | 56 | 5 | 24 | 173 | 94 | 280 | 1.89e-42 | 149 |
| Msa0773330 | AT1G06070.1 | 47.514 | 181 | 63 | 3 | 24 | 172 | 108 | 288 | 9.86e-40 | 142 |
| Msa0773330 | AT1G06850.2 | 51.111 | 135 | 51 | 3 | 29 | 149 | 70 | 203 | 6.88e-35 | 125 |
| Msa0773330 | AT4G38900.2 | 71.277 | 94 | 27 | 0 | 79 | 172 | 379 | 472 | 3.51e-33 | 126 |
| Msa0773330 | AT4G38900.3 | 71.277 | 94 | 27 | 0 | 79 | 172 | 379 | 472 | 3.51e-33 | 126 |
| Msa0773330 | AT1G43700.1 | 68.041 | 97 | 29 | 1 | 78 | 172 | 176 | 272 | 7.79e-33 | 122 |
| Msa0773330 | AT4G38900.1 | 67.000 | 100 | 27 | 1 | 79 | 172 | 379 | 478 | 7.67e-31 | 120 |
| Msa0773330 | AT2G21230.2 | 65.957 | 94 | 32 | 0 | 79 | 172 | 355 | 448 | 3.21e-30 | 117 |
| Msa0773330 | AT2G21230.4 | 65.957 | 94 | 32 | 0 | 79 | 172 | 355 | 448 | 6.27e-30 | 117 |
| Msa0773330 | AT2G21230.1 | 65.957 | 94 | 32 | 0 | 79 | 172 | 355 | 448 | 6.27e-30 | 117 |
| Msa0773330 | AT2G21230.3 | 65.957 | 94 | 32 | 0 | 79 | 172 | 355 | 448 | 6.80e-30 | 117 |
| Msa0773330 | AT3G58120.2 | 42.857 | 84 | 48 | 0 | 94 | 177 | 202 | 285 | 3.89e-13 | 68.2 |
| Msa0773330 | AT2G42380.5 | 45.000 | 80 | 44 | 0 | 93 | 172 | 185 | 264 | 4.80e-13 | 67.4 |
| Msa0773330 | AT2G42380.2 | 47.297 | 74 | 39 | 0 | 93 | 166 | 185 | 258 | 1.59e-12 | 66.6 |
| Msa0773330 | AT3G58120.1 | 47.945 | 73 | 38 | 0 | 94 | 166 | 202 | 274 | 1.68e-12 | 66.6 |
| Msa0773330 | AT2G12900.1 | 33.696 | 92 | 61 | 0 | 94 | 185 | 116 | 207 | 2.69e-11 | 62.4 |
| Msa0773330 | AT2G12940.1 | 34.409 | 93 | 60 | 1 | 80 | 172 | 135 | 226 | 3.28e-11 | 62.4 |
Find 103 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGACATCGGCACAATAATT+TGG | 0.242899 | 5_2:+48255483 | Msa0773330:CDS |
| TTTGGATTTGAATTGGGATT+AGG | 0.258134 | 5_2:-48252575 | None:intergenic |
| GTCATTGGGTCGAGTTTGTT+TGG | 0.270016 | 5_2:+48252921 | Msa0773330:CDS |
| GTGGTGGCAGTGGTGGTAAT+TGG | 0.271069 | 5_2:-48252613 | None:intergenic |
| TTGTTTGGGGAGACTATAGA+TGG | 0.281473 | 5_2:+48252936 | Msa0773330:CDS |
| TTGGATTTGAATTGGGATTA+GGG | 0.289035 | 5_2:-48252574 | None:intergenic |
| GTCGTTGGGTTGAGTTCGTT+TGG | 0.295731 | 5_2:+48255505 | Msa0773330:CDS |
| TGGGATGCATTGTGTGGATT+TGG | 0.295865 | 5_2:-48252593 | None:intergenic |
| CGACATAATAATTTGGTCAT+TGG | 0.303981 | 5_2:+48252906 | Msa0773330:CDS |
| TGGTGGCAGTGGTGGTAATT+GGG | 0.323703 | 5_2:-48252612 | None:intergenic |
| GAGACATCGACATAATAATT+TGG | 0.326453 | 5_2:+48252899 | Msa0773330:CDS |
| CAAAGCTCAGCCAACTTATC+AGG | 0.329404 | 5_2:-48252975 | None:intergenic |
| TCATTGGGTCGAGTTTGTTT+GGG | 0.335881 | 5_2:+48252922 | Msa0773330:CDS |
| CAAAGCTCAGCCAACTTATC+AGG | 0.343237 | 5_2:-48255559 | None:intergenic |
| TCGTTGGGTTGAGTTCGTTT+GGG | 0.362752 | 5_2:+48255506 | Msa0773330:CDS |
| GTGTGGATTTGGATTTGAAT+TGG | 0.369541 | 5_2:-48252582 | None:intergenic |
| TGGGATTAGGGTTTGAAGAT+TGG | 0.371458 | 5_2:-48252562 | None:intergenic |
| TGGAGATGCTGGAGCAGATC+CGG | 0.379190 | 5_2:+48252839 | Msa0773330:CDS |
| TGGAGATGCTGGAGCAGATC+CGG | 0.379190 | 5_2:+48255423 | Msa0773330:CDS |
| TGTGGATTTGGATTTGAATT+GGG | 0.396640 | 5_2:-48252581 | None:intergenic |
| CTGATAAGTTGGCTGAGCTT+TGG | 0.398977 | 5_2:+48252976 | Msa0773330:CDS |
| CTGATAAGTTGGCTGAGCTT+TGG | 0.400539 | 5_2:+48255560 | Msa0773330:CDS |
| GGTGCCGCCGTGGAGGGTGG+TGG | 0.409468 | 5_2:-48252629 | None:intergenic |
| TTCGCACATTTAGGATCAAC+AGG | 0.413831 | 5_2:-48252999 | None:intergenic |
| GAGTTCGTTTGGGGAGACTA+TGG | 0.418532 | 5_2:+48255516 | Msa0773330:CDS |
| GCCGTGGAGGGTGGTGGCAG+TGG | 0.420846 | 5_2:-48252623 | None:intergenic |
| GACATAATAATTTGGTCATT+GGG | 0.421535 | 5_2:+48252907 | Msa0773330:CDS |
| TGGTGGGAAGAGTGAGGGTT+TGG | 0.427294 | 5_2:-48252660 | None:intergenic |
| GGCACAATAATTTGGTCGTT+GGG | 0.432993 | 5_2:+48255491 | Msa0773330:CDS |
| CGGCACAATAATTTGGTCGT+TGG | 0.438010 | 5_2:+48255490 | Msa0773330:CDS |
| GAAGAGTGAGGGTTTGGCGG+TGG | 0.440467 | 5_2:-48252654 | None:intergenic |
| CGGAGTGTGCTCAACGGTGG+TGG | 0.445292 | 5_2:-48252677 | None:intergenic |
| TGGGAAGAGTGAGGGTTTGG+CGG | 0.451589 | 5_2:-48252657 | None:intergenic |
| CGAAGGGGCAGAGAAGAATC+AGG | 0.454515 | 5_2:+48252869 | Msa0773330:CDS |
| GTGGTTGGTGCCGCCGTGGA+GGG | 0.462825 | 5_2:-48252635 | None:intergenic |
| TGAATGGATCGGACGGGGAG+AGG | 0.474920 | 5_2:-48252734 | None:intergenic |
| TCTGCCCCTTCGTTTCCTCC+CGG | 0.478769 | 5_2:-48252858 | None:intergenic |
| CGAAGAGGCAGAGAAGAATC+CGG | 0.481169 | 5_2:+48255453 | Msa0773330:CDS |
| TCTGCCTCTTCGCTTCCTCC+CGG | 0.484387 | 5_2:-48255442 | None:intergenic |
| AGCTATGTCTCCTGATAAGT+TGG | 0.488757 | 5_2:+48252965 | Msa0773330:CDS |
| GTTGGTGCCGCCGTGGAGGG+TGG | 0.497766 | 5_2:-48252632 | None:intergenic |
| AGCTATGCCTCCTGATAAGT+TGG | 0.499388 | 5_2:+48255549 | Msa0773330:CDS |
| GTGGAGGGTGGTGGCAGTGG+TGG | 0.499749 | 5_2:-48252620 | None:intergenic |
| AGTGAGGGTTTGGCGGTGGT+TGG | 0.499760 | 5_2:-48252650 | None:intergenic |
| ATGGACAGACTTGGAGATGC+TGG | 0.503770 | 5_2:+48252828 | Msa0773330:CDS |
| ATGGACAGACTTGGAGATGC+TGG | 0.503770 | 5_2:+48255412 | Msa0773330:CDS |
| GGTGGTTGGTGCCGCCGTGG+AGG | 0.506744 | 5_2:-48252636 | None:intergenic |
| GAGAGGTCCATCATGTCGTC+TGG | 0.510104 | 5_2:-48252717 | None:intergenic |
| TGCCCAACTGACACTATACC+AGG | 0.512274 | 5_2:+48254824 | Msa0773330:CDS |
| GTTGATGATCTGCCGGTGAA+TGG | 0.513134 | 5_2:-48252750 | None:intergenic |
| TGCTCATTCAAAAGAGAGAA+AGG | 0.514267 | 5_2:+48254737 | Msa0773330:CDS |
| TTGATCCTAAATGTGCGAAA+AGG | 0.514958 | 5_2:+48255587 | Msa0773330:CDS |
| TACATTGACATGGACAGACT+TGG | 0.516336 | 5_2:+48252819 | Msa0773330:CDS |
| TACATTGACATGGACAGACT+TGG | 0.516336 | 5_2:+48255403 | Msa0773330:CDS |
| TCGTTTGGGGAGACTATGGA+TGG | 0.520293 | 5_2:+48255520 | Msa0773330:CDS |
| GCAGATCCGGGAGGAAACGA+AGG | 0.527514 | 5_2:+48252852 | Msa0773330:CDS |
| TAAGCTCCGTCCGCAAGCAA+TGG | 0.531437 | 5_2:+48255289 | Msa0773330:CDS |
| CAGATCCGGGAGGAAACGAA+GGG | 0.534632 | 5_2:+48252853 | Msa0773330:CDS |
| TTGATCCTAAATGTGCGAAA+AGG | 0.537313 | 5_2:+48253003 | Msa0773330:CDS |
| GGAGATGCTGGAGCAGATCC+GGG | 0.539976 | 5_2:+48252840 | Msa0773330:CDS |
| GGAGATGCTGGAGCAGATCC+GGG | 0.539976 | 5_2:+48255424 | Msa0773330:CDS |
| GTTGCTCCATTGCTTGCGGA+CGG | 0.540579 | 5_2:-48255295 | None:intergenic |
| TGCCGGTGAATGGATCGGAC+GGG | 0.541814 | 5_2:-48252740 | None:intergenic |
| AACCTGGTATAGTGTCAGTT+GGG | 0.543208 | 5_2:-48254826 | None:intergenic |
| TCCCCGTCCGATCCATTCAC+CGG | 0.545509 | 5_2:+48252738 | Msa0773330:CDS |
| GCCGGTGAATGGATCGGACG+GGG | 0.546664 | 5_2:-48252739 | None:intergenic |
| ACCACTGCCACCACCCTCCA+CGG | 0.547567 | 5_2:+48252622 | Msa0773330:five_prime_UTR |
| TGTTTGGGGAGACTATAGAT+GGG | 0.548419 | 5_2:+48252937 | Msa0773330:CDS |
| GAGTTGTAGCATCAGTCTGT+AGG | 0.551575 | 5_2:-48254797 | None:intergenic |
| CTGCCGGTGAATGGATCGGA+CGG | 0.557304 | 5_2:-48252741 | None:intergenic |
| AAACCTGGTATAGTGTCAGT+TGG | 0.558403 | 5_2:-48254827 | None:intergenic |
| GGAGTGTGCTCAACGGTGGT+GGG | 0.564382 | 5_2:-48252676 | None:intergenic |
| AGTTGTAGCATCAGTCTGTA+GGG | 0.565606 | 5_2:-48254796 | None:intergenic |
| GCTAGCAGTTGATGATCTGC+CGG | 0.567306 | 5_2:-48252757 | None:intergenic |
| TGCCGATGTCTCAACCTCAC+CGG | 0.569694 | 5_2:-48255472 | None:intergenic |
| CGTTGGGTTGAGTTCGTTTG+GGG | 0.570030 | 5_2:+48255507 | Msa0773330:CDS |
| GGCGGTGGTTGGTGCCGCCG+TGG | 0.570978 | 5_2:-48252639 | None:intergenic |
| CCGCTTACCAGACGACATGA+TGG | 0.571319 | 5_2:+48252710 | Msa0773330:exon |
| CAACAAACACATCTTCATGA+TGG | 0.580671 | 5_2:+48255314 | Msa0773330:CDS |
| ACTGCTAGCCTCGATGAGAT+CGG | 0.580821 | 5_2:+48252771 | Msa0773330:CDS |
| GGTAATTGGGATGCATTGTG+TGG | 0.581148 | 5_2:-48252599 | None:intergenic |
| TTTCGCACATTTAGGATCAA+CGG | 0.584714 | 5_2:-48255584 | None:intergenic |
| CATTGGGTCGAGTTTGTTTG+GGG | 0.585199 | 5_2:+48252923 | Msa0773330:CDS |
| TGATCTGCCGGTGAATGGAT+CGG | 0.590158 | 5_2:-48252745 | None:intergenic |
| ATCCGGTGAGGTTGAGACAT+CGG | 0.592715 | 5_2:+48255470 | Msa0773330:CDS |
| CAACGGTGGTGGGAAGAGTG+AGG | 0.596975 | 5_2:-48252666 | None:intergenic |
| AACGGTGGTGGGAAGAGTGA+GGG | 0.609602 | 5_2:-48252665 | None:intergenic |
| GTTTGTTGCTCCATTGCTTG+CGG | 0.611180 | 5_2:-48255299 | None:intergenic |
| AGCTCAGCCAACTTATCAGG+AGG | 0.632846 | 5_2:-48255556 | None:intergenic |
| CCATCATGTCGTCTGGTAAG+CGG | 0.636641 | 5_2:-48252710 | None:intergenic |
| TGGTAAGCGGAATGTGAGGT+CGG | 0.636941 | 5_2:-48252697 | None:intergenic |
| CGTCTGGTAAGCGGAATGTG+AGG | 0.640000 | 5_2:-48252701 | None:intergenic |
| AGATCCGGGAGGAAGCGAAG+AGG | 0.647845 | 5_2:+48255438 | Msa0773330:CDS |
| CGTTTGGGGAGACTATGGAT+GGG | 0.670001 | 5_2:+48255521 | Msa0773330:CDS |
| GGGCAGAGAAGAATCAGGTG+AGG | 0.681356 | 5_2:+48252874 | Msa0773330:CDS |
| GGTCGGAGTGTGCTCAACGG+TGG | 0.682861 | 5_2:-48252680 | None:intergenic |
| AGGCAGAGAAGAATCCGGTG+AGG | 0.692593 | 5_2:+48255458 | Msa0773330:CDS |
| ACTGCCACCACCCTCCACGG+CGG | 0.697074 | 5_2:+48252625 | Msa0773330:five_prime_UTR |
| CTTCGGATCCGATCTCATCG+AGG | 0.697774 | 5_2:-48252779 | None:intergenic |
| GATGCTGGAGCAGATCCGGG+AGG | 0.709228 | 5_2:+48252843 | Msa0773330:CDS |
| GATGCTGGAGCAGATCCGGG+AGG | 0.709228 | 5_2:+48255427 | Msa0773330:CDS |
| TGAGGTCGGAGTGTGCTCAA+CGG | 0.717564 | 5_2:-48252683 | None:intergenic |
| AGATCCGGGAGGAAACGAAG+GGG | 0.720038 | 5_2:+48252854 | Msa0773330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGGTAAAATAAATTAATA+AGG | + | chr5_2:48253187-48253206 | Msa0773330:intron | 10.0% |
| !!! | TTGAAATTTTTTAATAGTTT+GGG | + | chr5_2:48253959-48253978 | Msa0773330:intron | 10.0% |
| !!! | ATTAGTTAATTTTTCAATGA+CGG | + | chr5_2:48253073-48253092 | Msa0773330:intron | 15.0% |
| !!! | TGATTTTCTTTTATTAGTTT+AGG | + | chr5_2:48253144-48253163 | Msa0773330:intron | 15.0% |
| !!! | GTTGAAATTTTTTAATAGTT+TGG | + | chr5_2:48253958-48253977 | Msa0773330:intron | 15.0% |
| !!! | TTTTTTTTTATATAGTGATG+AGG | + | chr5_2:48254221-48254240 | Msa0773330:intron | 15.0% |
| !! | TTATACAAAAAGATTCTTAA+TGG | - | chr5_2:48254310-48254329 | None:intergenic | 15.0% |
| !!! | TCATATTTTTTAGCTATAAA+TGG | - | chr5_2:48255003-48255022 | None:intergenic | 15.0% |
| !!! | TCTAGAACATTTTATATAAA+AGG | - | chr5_2:48255064-48255083 | None:intergenic | 15.0% |
| !! | AAACCTCAGATAATTAAAAA+AGG | + | chr5_2:48252533-48252552 | Msa0773330:five_prime_UTR | 20.0% |
| !!! | TTAGTTAATTTTTCAATGAC+GGG | + | chr5_2:48253074-48253093 | Msa0773330:intron | 20.0% |
| !!! | TATGTTGAGTTTTTGTTAAT+TGG | + | chr5_2:48253105-48253124 | Msa0773330:intron | 20.0% |
| !!! | ACTAGCTTATAAATATGATA+TGG | + | chr5_2:48253314-48253333 | Msa0773330:intron | 20.0% |
| !!! | AACCAAGAAAAAACATTTTT+AGG | + | chr5_2:48253754-48253773 | Msa0773330:intron | 20.0% |
| !!! | TACCTAAAAATGTTTTTTCT+TGG | - | chr5_2:48253759-48253778 | None:intergenic | 20.0% |
| !!! | AAGAAAAAACATTTTTAGGT+AGG | + | chr5_2:48253758-48253777 | Msa0773330:intron | 20.0% |
| !!! | AGAAAAAACATTTTTAGGTA+GGG | + | chr5_2:48253759-48253778 | Msa0773330:intron | 20.0% |
| !!! | TTGTTTTGATAATTTTTGTG+TGG | + | chr5_2:48254051-48254070 | Msa0773330:intron | 20.0% |
| !! | AATTTATGATTAGAGATTAG+AGG | + | chr5_2:48254284-48254303 | Msa0773330:intron | 20.0% |
| !!! | CTTCTTAGATTTAAACTTTT+GGG | + | chr5_2:48254560-48254579 | Msa0773330:intron | 20.0% |
| !!! | TTCTTAGATTTAAACTTTTG+GGG | + | chr5_2:48254561-48254580 | Msa0773330:intron | 20.0% |
| !!! | GTTTTGTTTATTGGATTTAT+CGG | + | chr5_2:48254912-48254931 | Msa0773330:intron | 20.0% |
| !!! | TAGCTAAAAAATATGACTTT+TGG | + | chr5_2:48255007-48255026 | Msa0773330:intron | 20.0% |
| !! | TCTTTAACATATTGTAAGAA+GGG | - | chr5_2:48255351-48255370 | None:intergenic | 20.0% |
| !! | ATCTTTAACATATTGTAAGA+AGG | - | chr5_2:48255352-48255371 | None:intergenic | 20.0% |
| !!! | GTACCTTTTTTAATTATCTG+AGG | - | chr5_2:48252539-48252558 | None:intergenic | 25.0% |
| ! | GACATAATAATTTGGTCATT+GGG | + | chr5_2:48252907-48252926 | Msa0773330:CDS | 25.0% |
| !! | AGTTTAGGCAATTTAAAACA+AGG | + | chr5_2:48253159-48253178 | Msa0773330:intron | 25.0% |
| ! | AATAACTGATAAGCTTATAG+CGG | + | chr5_2:48253210-48253229 | Msa0773330:intron | 25.0% |
| ! | TGCTAGATTTAAACAAATGA+GGG | - | chr5_2:48253636-48253655 | None:intergenic | 25.0% |
| ! | TTGCTAGATTTAAACAAATG+AGG | - | chr5_2:48253637-48253656 | None:intergenic | 25.0% |
| !! | TTTCCAAGACCAATTTTAAA+GGG | - | chr5_2:48253683-48253702 | None:intergenic | 25.0% |
| !! | ATTTCCAAGACCAATTTTAA+AGG | - | chr5_2:48253684-48253703 | None:intergenic | 25.0% |
| ! | TGTTTATAATTGGAATCGAT+TGG | - | chr5_2:48253713-48253732 | None:intergenic | 25.0% |
| ! | CGATTCCAATTATAAACAAA+AGG | + | chr5_2:48253715-48253734 | Msa0773330:intron | 25.0% |
| !!! | AAGCTCCTTTTGTTTATAAT+TGG | - | chr5_2:48253723-48253742 | None:intergenic | 25.0% |
| ! | CGTTAAAAAATTCAGCAATT+GGG | - | chr5_2:48253886-48253905 | None:intergenic | 25.0% |
| ! | TCGTTAAAAAATTCAGCAAT+TGG | - | chr5_2:48253887-48253906 | None:intergenic | 25.0% |
| !! | GCTTCTTAGATTTAAACTTT+TGG | + | chr5_2:48254559-48254578 | Msa0773330:intron | 25.0% |
| !! | TCTTAGATTTAAACTTTTGG+GGG | + | chr5_2:48254562-48254581 | Msa0773330:intron | 25.0% |
| !!! | AGTAACTCTGTTTTGTTTAT+TGG | + | chr5_2:48254903-48254922 | Msa0773330:intron | 25.0% |
| ! | ATAAATGGAACAAGGATATA+TGG | - | chr5_2:48254988-48255007 | None:intergenic | 25.0% |
| !!! | TTTTAGCTATAAATGGAACA+AGG | - | chr5_2:48254996-48255015 | None:intergenic | 25.0% |
| ! | TACTGTACATTTAATCACTT+TGG | + | chr5_2:48255088-48255107 | Msa0773330:intron | 25.0% |
| !! | ATTTAATCACTTTGGTGATT+TGG | + | chr5_2:48255096-48255115 | Msa0773330:intron | 25.0% |
| !! | TTTAATCACTTTGGTGATTT+GGG | + | chr5_2:48255097-48255116 | Msa0773330:intron | 25.0% |
| ! | TGTTTGTGAATAATTCATCA+TGG | + | chr5_2:48255147-48255166 | Msa0773330:intron | 25.0% |
| ! | CTTTAACATATTGTAAGAAG+GGG | - | chr5_2:48255350-48255369 | None:intergenic | 25.0% |
| TTGGATTTGAATTGGGATTA+GGG | - | chr5_2:48252577-48252596 | None:intergenic | 30.0% | |
| TTTGGATTTGAATTGGGATT+AGG | - | chr5_2:48252578-48252597 | None:intergenic | 30.0% | |
| TGTGGATTTGGATTTGAATT+GGG | - | chr5_2:48252584-48252603 | None:intergenic | 30.0% | |
| GAGACATCGACATAATAATT+TGG | + | chr5_2:48252899-48252918 | Msa0773330:CDS | 30.0% | |
| CGACATAATAATTTGGTCAT+TGG | + | chr5_2:48252906-48252925 | Msa0773330:CDS | 30.0% | |
| ! | ATTTAAAACAAGGCTCTGTT+TGG | + | chr5_2:48253169-48253188 | Msa0773330:intron | 30.0% |
| !!! | GGTCTTTTTTAAGTCAAATG+AGG | + | chr5_2:48253403-48253422 | Msa0773330:intron | 30.0% |
| ! | CTAATTGATTTAGCACAACT+CGG | - | chr5_2:48253520-48253539 | None:intergenic | 30.0% |
| !! | ATTTTAAAGGGGTGATATGA+GGG | - | chr5_2:48253671-48253690 | None:intergenic | 30.0% |
| !! | AATTTTAAAGGGGTGATATG+AGG | - | chr5_2:48253672-48253691 | None:intergenic | 30.0% |
| !! | TCATATCACCCCTTTAAAAT+TGG | + | chr5_2:48253671-48253690 | Msa0773330:intron | 30.0% |
| !! | TTCCAAGACCAATTTTAAAG+GGG | - | chr5_2:48253682-48253701 | None:intergenic | 30.0% |
| ACTCATCTCAATTATTTGAC+TGG | + | chr5_2:48254091-48254110 | Msa0773330:intron | 30.0% | |
| CTCATCTCAATTATTTGACT+GGG | + | chr5_2:48254092-48254111 | Msa0773330:intron | 30.0% | |
| ! | CAATCTAGAATCACATAAGA+GGG | - | chr5_2:48254145-48254164 | None:intergenic | 30.0% |
| ! | ACAATCTAGAATCACATAAG+AGG | - | chr5_2:48254146-48254165 | None:intergenic | 30.0% |
| GTAAGTTCTATGAGTAATTG+CGG | + | chr5_2:48254164-48254183 | Msa0773330:intron | 30.0% | |
| AAGCTCAAATACGTCAAATA+TGG | + | chr5_2:48254372-48254391 | Msa0773330:intron | 30.0% | |
| CGTCAAATATGGAAAAACAT+TGG | + | chr5_2:48254383-48254402 | Msa0773330:intron | 30.0% | |
| ! | AAAAACATTGGTGTTTGACA+TGG | + | chr5_2:48254395-48254414 | Msa0773330:intron | 30.0% |
| TCCATATTGTTCTATGTATC+CGG | + | chr5_2:48254536-48254555 | Msa0773330:intron | 30.0% | |
| AAGTTTAAATCTAAGAAGCC+CGG | - | chr5_2:48254558-48254577 | None:intergenic | 30.0% | |
| CACTCTCATACTTAAATTTG+TGG | + | chr5_2:48255184-48255203 | Msa0773330:intron | 30.0% | |
| !!! | TTATTTTAGAGAGACACAAC+AGG | + | chr5_2:48255242-48255261 | Msa0773330:intron | 30.0% |
| GTGTGGATTTGGATTTGAAT+TGG | - | chr5_2:48252585-48252604 | None:intergenic | 35.0% | |
| CGTCAAAAACAAGTCATCTT+CGG | - | chr5_2:48252799-48252818 | None:intergenic | 35.0% | |
| ! | GTTTTTGACGTACATTGACA+TGG | + | chr5_2:48252809-48252828 | Msa0773330:CDS | 35.0% |
| TTGATCCTAAATGTGCGAAA+AGG | + | chr5_2:48253003-48253022 | Msa0773330:CDS | 35.0% | |
| TGACTTAAAAAAGACCCGTT+TGG | - | chr5_2:48253399-48253418 | None:intergenic | 35.0% | |
| TTGTTGTGTGTTCAATCTGT+CGG | + | chr5_2:48253485-48253504 | Msa0773330:intron | 35.0% | |
| ! | AACTCCACTAACAACCATTT+TGG | + | chr5_2:48253576-48253595 | Msa0773330:intron | 35.0% |
| !!! | ACATTTTTAGGTAGGGAACT+AGG | + | chr5_2:48253766-48253785 | Msa0773330:intron | 35.0% |
| !! | AAGTTTGTTGTGTGTGATTG+TGG | + | chr5_2:48254009-48254028 | Msa0773330:intron | 35.0% |
| ATTATTTGACTGGGATGAGT+TGG | + | chr5_2:48254101-48254120 | Msa0773330:intron | 35.0% | |
| ! | ACACATTTGTTAGCGTATCT+TGG | + | chr5_2:48254462-48254481 | Msa0773330:intron | 35.0% |
| CCATATTGTTCTATGTATCC+GGG | + | chr5_2:48254537-48254556 | Msa0773330:intron | 35.0% | |
| !! | TAGATTTAAACTTTTGGGGG+TGG | + | chr5_2:48254565-48254584 | Msa0773330:intron | 35.0% |
| TGCTCATTCAAAAGAGAGAA+AGG | + | chr5_2:48254737-48254756 | Msa0773330:CDS | 35.0% | |
| GATAAATGTCAACACAAACC+TGG | - | chr5_2:48254845-48254864 | None:intergenic | 35.0% | |
| CAACAAACACATCTTCATGA+TGG | + | chr5_2:48255314-48255333 | Msa0773330:CDS | 35.0% | |
| CGTCAAAAACAAGTCATCTT+CGG | - | chr5_2:48252799-48252818 | None:intergenic | 35.0% | |
| ! | GTTTTTGACGTACATTGACA+TGG | + | chr5_2:48252809-48252828 | Msa0773330:CDS | 35.0% |
| ! | TTTCGCACATTTAGGATCAA+CGG | - | chr5_2:48253003-48253022 | None:intergenic | 35.0% |
| TTGATCCTAAATGTGCGAAA+AGG | + | chr5_2:48253003-48253022 | Msa0773330:CDS | 35.0% | |
| ! | ACAAACCTTTTCGCACATTT+AGG | - | chr5_2:48255595-48255614 | None:intergenic | 35.0% |
| TGGGATTAGGGTTTGAAGAT+TGG | - | chr5_2:48252565-48252584 | None:intergenic | 40.0% | |
| TACATTGACATGGACAGACT+TGG | + | chr5_2:48252819-48252838 | Msa0773330:CDS | 40.0% | |
| ! | TCATTGGGTCGAGTTTGTTT+GGG | + | chr5_2:48252922-48252941 | Msa0773330:CDS | 40.0% |
| TTGTTTGGGGAGACTATAGA+TGG | + | chr5_2:48252936-48252955 | Msa0773330:CDS | 40.0% | |
| TGTTTGGGGAGACTATAGAT+GGG | + | chr5_2:48252937-48252956 | Msa0773330:CDS | 40.0% | |
| AGCTATGTCTCCTGATAAGT+TGG | + | chr5_2:48252965-48252984 | Msa0773330:CDS | 40.0% | |
| ! | TTCGCACATTTAGGATCAAC+AGG | - | chr5_2:48253002-48253021 | None:intergenic | 40.0% |
| ! | ACGAACCTTTTCGCACATTT+AGG | - | chr5_2:48253011-48253030 | None:intergenic | 40.0% |
| AGAACGTCACAGTTACCAAA+CGG | + | chr5_2:48253381-48253400 | Msa0773330:intron | 40.0% | |
| GTTTACTCACACTGCAGAAA+CGG | - | chr5_2:48253607-48253626 | None:intergenic | 40.0% | |
| !! | CACCCCTTTAAAATTGGTCT+TGG | + | chr5_2:48253677-48253696 | Msa0773330:intron | 40.0% |
| GGCAACTAGTTCAAGATGAA+GGG | - | chr5_2:48253816-48253835 | None:intergenic | 40.0% | |
| CCAGATACACGACAAAATAG+GGG | - | chr5_2:48253837-48253856 | None:intergenic | 40.0% | |
| GCCAGATACACGACAAAATA+GGG | - | chr5_2:48253838-48253857 | None:intergenic | 40.0% | |
| AGCCAGATACACGACAAAAT+AGG | - | chr5_2:48253839-48253858 | None:intergenic | 40.0% | |
| GTATCTGGCTATGTGTTCAA+TGG | + | chr5_2:48253849-48253868 | Msa0773330:intron | 40.0% | |
| CTAGAATCACATAAGAGGGT+TGG | - | chr5_2:48254141-48254160 | None:intergenic | 40.0% | |
| CCCGGATACATAGAACAATA+TGG | - | chr5_2:48254540-48254559 | None:intergenic | 40.0% | |
| !! | ATTTAAACTTTTGGGGGTGG+AGG | + | chr5_2:48254568-48254587 | Msa0773330:intron | 40.0% |
| AGTTGTAGCATCAGTCTGTA+GGG | - | chr5_2:48254799-48254818 | None:intergenic | 40.0% | |
| AACCTGGTATAGTGTCAGTT+GGG | - | chr5_2:48254829-48254848 | None:intergenic | 40.0% | |
| AAACCTGGTATAGTGTCAGT+TGG | - | chr5_2:48254830-48254849 | None:intergenic | 40.0% | |
| GAACAAGGATATATGGCTCA+AGG | - | chr5_2:48254981-48255000 | None:intergenic | 40.0% | |
| TACATTGACATGGACAGACT+TGG | + | chr5_2:48252819-48252838 | Msa0773330:CDS | 40.0% | |
| GAGACATCGGCACAATAATT+TGG | + | chr5_2:48255483-48255502 | Msa0773330:CDS | 40.0% | |
| GGCACAATAATTTGGTCGTT+GGG | + | chr5_2:48255491-48255510 | Msa0773330:CDS | 40.0% | |
| TGGGATGCATTGTGTGGATT+TGG | - | chr5_2:48252596-48252615 | None:intergenic | 45.0% | |
| GGTAATTGGGATGCATTGTG+TGG | - | chr5_2:48252602-48252621 | None:intergenic | 45.0% | |
| ! | GTCATTGGGTCGAGTTTGTT+TGG | + | chr5_2:48252921-48252940 | Msa0773330:CDS | 45.0% |
| ! | CATTGGGTCGAGTTTGTTTG+GGG | + | chr5_2:48252923-48252942 | Msa0773330:CDS | 45.0% |
| CAAAGCTCAGCCAACTTATC+AGG | - | chr5_2:48252978-48252997 | None:intergenic | 45.0% | |
| ! | CTGATAAGTTGGCTGAGCTT+TGG | + | chr5_2:48252976-48252995 | Msa0773330:CDS | 45.0% |
| GAACGTCACAGTTACCAAAC+GGG | + | chr5_2:48253382-48253401 | Msa0773330:intron | 45.0% | |
| TTTAGCACAACTCGGAGAGA+AGG | - | chr5_2:48253512-48253531 | None:intergenic | 45.0% | |
| GTGGCCAAAATGGTTGTTAG+TGG | - | chr5_2:48253583-48253602 | None:intergenic | 45.0% | |
| GGGCAACTAGTTCAAGATGA+AGG | - | chr5_2:48253817-48253836 | None:intergenic | 45.0% | |
| ! | CCCCTATTTTGTCGTGTATC+TGG | + | chr5_2:48253834-48253853 | Msa0773330:intron | 45.0% |
| GTGGAGGATAAAGTGAGAGA+GGG | + | chr5_2:48254584-48254603 | Msa0773330:intron | 45.0% | |
| TGGAGGATAAAGTGAGAGAG+GGG | + | chr5_2:48254585-48254604 | Msa0773330:intron | 45.0% | |
| GAGTTGTAGCATCAGTCTGT+AGG | - | chr5_2:48254800-48254819 | None:intergenic | 45.0% | |
| ! | GTTTGTTGCTCCATTGCTTG+CGG | - | chr5_2:48255302-48255321 | None:intergenic | 45.0% |
| CGGCACAATAATTTGGTCGT+TGG | + | chr5_2:48255490-48255509 | Msa0773330:CDS | 45.0% | |
| !! | TCGTTGGGTTGAGTTCGTTT+GGG | + | chr5_2:48255506-48255525 | Msa0773330:CDS | 45.0% |
| AGCTATGCCTCCTGATAAGT+TGG | + | chr5_2:48255549-48255568 | Msa0773330:CDS | 45.0% | |
| CAAAGCTCAGCCAACTTATC+AGG | - | chr5_2:48252978-48252997 | None:intergenic | 45.0% | |
| ! | CTGATAAGTTGGCTGAGCTT+TGG | + | chr5_2:48252976-48252995 | Msa0773330:CDS | 45.0% |
| TGGTGGCAGTGGTGGTAATT+GGG | - | chr5_2:48252615-48252634 | None:intergenic | 50.0% | |
| TGGTAAGCGGAATGTGAGGT+CGG | - | chr5_2:48252700-48252719 | None:intergenic | 50.0% | |
| CCATCATGTCGTCTGGTAAG+CGG | - | chr5_2:48252713-48252732 | None:intergenic | 50.0% | |
| TGATCTGCCGGTGAATGGAT+CGG | - | chr5_2:48252748-48252767 | None:intergenic | 50.0% | |
| !! | GTTGATGATCTGCCGGTGAA+TGG | - | chr5_2:48252753-48252772 | None:intergenic | 50.0% |
| !! | GCTAGCAGTTGATGATCTGC+CGG | - | chr5_2:48252760-48252779 | None:intergenic | 50.0% |
| ! | ACTGCTAGCCTCGATGAGAT+CGG | + | chr5_2:48252771-48252790 | Msa0773330:CDS | 50.0% |
| ATGGACAGACTTGGAGATGC+TGG | + | chr5_2:48252828-48252847 | Msa0773330:CDS | 50.0% | |
| CAGAAACGGAGTGGCCAAAA+TGG | - | chr5_2:48253593-48253612 | None:intergenic | 50.0% | |
| GGTGGAGGATAAAGTGAGAG+AGG | + | chr5_2:48254583-48254602 | Msa0773330:intron | 50.0% | |
| TGCCCAACTGACACTATACC+AGG | + | chr5_2:48254824-48254843 | Msa0773330:CDS | 50.0% | |
| ATGGACAGACTTGGAGATGC+TGG | + | chr5_2:48252828-48252847 | Msa0773330:CDS | 50.0% | |
| CGAAGAGGCAGAGAAGAATC+CGG | + | chr5_2:48255453-48255472 | Msa0773330:CDS | 50.0% | |
| ATCCGGTGAGGTTGAGACAT+CGG | + | chr5_2:48255470-48255489 | Msa0773330:CDS | 50.0% | |
| !! | GTCGTTGGGTTGAGTTCGTT+TGG | + | chr5_2:48255505-48255524 | Msa0773330:CDS | 50.0% |
| !! | CGTTGGGTTGAGTTCGTTTG+GGG | + | chr5_2:48255507-48255526 | Msa0773330:CDS | 50.0% |
| GAGTTCGTTTGGGGAGACTA+TGG | + | chr5_2:48255516-48255535 | Msa0773330:CDS | 50.0% | |
| TCGTTTGGGGAGACTATGGA+TGG | + | chr5_2:48255520-48255539 | Msa0773330:CDS | 50.0% | |
| CGTTTGGGGAGACTATGGAT+GGG | + | chr5_2:48255521-48255540 | Msa0773330:CDS | 50.0% | |
| AGCTCAGCCAACTTATCAGG+AGG | - | chr5_2:48252975-48252994 | None:intergenic | 50.0% | |
| GTGGTGGCAGTGGTGGTAAT+TGG | - | chr5_2:48252616-48252635 | None:intergenic | 55.0% | |
| TGGGAAGAGTGAGGGTTTGG+CGG | - | chr5_2:48252660-48252679 | None:intergenic | 55.0% | |
| TGGTGGGAAGAGTGAGGGTT+TGG | - | chr5_2:48252663-48252682 | None:intergenic | 55.0% | |
| !! | AACGGTGGTGGGAAGAGTGA+GGG | - | chr5_2:48252668-48252687 | None:intergenic | 55.0% |
| TGAGGTCGGAGTGTGCTCAA+CGG | - | chr5_2:48252686-48252705 | None:intergenic | 55.0% | |
| CGTCTGGTAAGCGGAATGTG+AGG | - | chr5_2:48252704-48252723 | None:intergenic | 55.0% | |
| CCGCTTACCAGACGACATGA+TGG | + | chr5_2:48252710-48252729 | Msa0773330:exon | 55.0% | |
| GAGAGGTCCATCATGTCGTC+TGG | - | chr5_2:48252720-48252739 | None:intergenic | 55.0% | |
| CTTCGGATCCGATCTCATCG+AGG | - | chr5_2:48252782-48252801 | None:intergenic | 55.0% | |
| TGGAGATGCTGGAGCAGATC+CGG | + | chr5_2:48252839-48252858 | Msa0773330:CDS | 55.0% | |
| CAGATCCGGGAGGAAACGAA+GGG | + | chr5_2:48252853-48252872 | Msa0773330:CDS | 55.0% | |
| AGATCCGGGAGGAAACGAAG+GGG | + | chr5_2:48252854-48252873 | Msa0773330:CDS | 55.0% | |
| CGAAGGGGCAGAGAAGAATC+AGG | + | chr5_2:48252869-48252888 | Msa0773330:CDS | 55.0% | |
| GGGCAGAGAAGAATCAGGTG+AGG | + | chr5_2:48252874-48252893 | Msa0773330:CDS | 55.0% | |
| CTCACACTGCAGAAACGGAG+TGG | - | chr5_2:48253602-48253621 | None:intergenic | 55.0% | |
| TAAGCTCCGTCCGCAAGCAA+TGG | + | chr5_2:48255289-48255308 | Msa0773330:CDS | 55.0% | |
| GTTGCTCCATTGCTTGCGGA+CGG | - | chr5_2:48255298-48255317 | None:intergenic | 55.0% | |
| TGGAGATGCTGGAGCAGATC+CGG | + | chr5_2:48252839-48252858 | Msa0773330:CDS | 55.0% | |
| AGGCAGAGAAGAATCCGGTG+AGG | + | chr5_2:48255458-48255477 | Msa0773330:CDS | 55.0% | |
| TGCCGATGTCTCAACCTCAC+CGG | - | chr5_2:48255475-48255494 | None:intergenic | 55.0% | |
| AGTGAGGGTTTGGCGGTGGT+TGG | - | chr5_2:48252653-48252672 | None:intergenic | 60.0% | |
| GAAGAGTGAGGGTTTGGCGG+TGG | - | chr5_2:48252657-48252676 | None:intergenic | 60.0% | |
| !! | CAACGGTGGTGGGAAGAGTG+AGG | - | chr5_2:48252669-48252688 | None:intergenic | 60.0% |
| GGAGTGTGCTCAACGGTGGT+GGG | - | chr5_2:48252679-48252698 | None:intergenic | 60.0% | |
| TGAATGGATCGGACGGGGAG+AGG | - | chr5_2:48252737-48252756 | None:intergenic | 60.0% | |
| TCCCCGTCCGATCCATTCAC+CGG | + | chr5_2:48252738-48252757 | Msa0773330:CDS | 60.0% | |
| TGCCGGTGAATGGATCGGAC+GGG | - | chr5_2:48252743-48252762 | None:intergenic | 60.0% | |
| CTGCCGGTGAATGGATCGGA+CGG | - | chr5_2:48252744-48252763 | None:intergenic | 60.0% | |
| GGAGATGCTGGAGCAGATCC+GGG | + | chr5_2:48252840-48252859 | Msa0773330:CDS | 60.0% | |
| GCAGATCCGGGAGGAAACGA+AGG | + | chr5_2:48252852-48252871 | Msa0773330:CDS | 60.0% | |
| TCTGCCCCTTCGTTTCCTCC+CGG | - | chr5_2:48252861-48252880 | None:intergenic | 60.0% | |
| GGAGATGCTGGAGCAGATCC+GGG | + | chr5_2:48252840-48252859 | Msa0773330:CDS | 60.0% | |
| AGATCCGGGAGGAAGCGAAG+AGG | + | chr5_2:48255438-48255457 | Msa0773330:CDS | 60.0% | |
| TCTGCCTCTTCGCTTCCTCC+CGG | - | chr5_2:48255445-48255464 | None:intergenic | 60.0% | |
| ACCACTGCCACCACCCTCCA+CGG | + | chr5_2:48252622-48252641 | Msa0773330:five_prime_UTR | 65.0% | |
| CGGAGTGTGCTCAACGGTGG+TGG | - | chr5_2:48252680-48252699 | None:intergenic | 65.0% | |
| GGTCGGAGTGTGCTCAACGG+TGG | - | chr5_2:48252683-48252702 | None:intergenic | 65.0% | |
| GCCGGTGAATGGATCGGACG+GGG | - | chr5_2:48252742-48252761 | None:intergenic | 65.0% | |
| GATGCTGGAGCAGATCCGGG+AGG | + | chr5_2:48252843-48252862 | Msa0773330:CDS | 65.0% | |
| GATGCTGGAGCAGATCCGGG+AGG | + | chr5_2:48252843-48252862 | Msa0773330:CDS | 65.0% | |
| ! | GTGGAGGGTGGTGGCAGTGG+TGG | - | chr5_2:48252623-48252642 | None:intergenic | 70.0% |
| ACTGCCACCACCCTCCACGG+CGG | + | chr5_2:48252625-48252644 | Msa0773330:five_prime_UTR | 70.0% | |
| !! | GTGGTTGGTGCCGCCGTGGA+GGG | - | chr5_2:48252638-48252657 | None:intergenic | 70.0% |
| ! | GCCGTGGAGGGTGGTGGCAG+TGG | - | chr5_2:48252626-48252645 | None:intergenic | 75.0% |
| !! | GTTGGTGCCGCCGTGGAGGG+TGG | - | chr5_2:48252635-48252654 | None:intergenic | 75.0% |
| !! | GGTGGTTGGTGCCGCCGTGG+AGG | - | chr5_2:48252639-48252658 | None:intergenic | 75.0% |
| !! | GGTGCCGCCGTGGAGGGTGG+TGG | - | chr5_2:48252632-48252651 | None:intergenic | 80.0% |
| !!! | GGCGGTGGTTGGTGCCGCCG+TGG | - | chr5_2:48252642-48252661 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 48252531 | 48255630 | 48252531 | ID=Msa0773330;Name=Msa0773330 |
| chr5_2 | mRNA | 48252531 | 48255630 | 48252531 | ID=Msa0773330-mRNA-1;Parent=Msa0773330;Name=Msa0773330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=195|0.66|0.5|1|1|1|4|0|253 |
| chr5_2 | exon | 48252531 | 48253024 | 48252531 | ID=Msa0773330-mRNA-1:exon:14418;Parent=Msa0773330-mRNA-1 |
| chr5_2 | exon | 48254713 | 48254845 | 48254713 | ID=Msa0773330-mRNA-1:exon:14419;Parent=Msa0773330-mRNA-1 |
| chr5_2 | exon | 48255251 | 48255335 | 48255251 | ID=Msa0773330-mRNA-1:exon:14420;Parent=Msa0773330-mRNA-1 |
| chr5_2 | exon | 48255386 | 48255630 | 48255386 | ID=Msa0773330-mRNA-1:exon:14421;Parent=Msa0773330-mRNA-1 |
| chr5_2 | five_prime_UTR | 48252531 | 48252725 | 48252531 | ID=Msa0773330-mRNA-1:five_prime_utr;Parent=Msa0773330-mRNA-1 |
| chr5_2 | CDS | 48252726 | 48253024 | 48252726 | ID=Msa0773330-mRNA-1:cds;Parent=Msa0773330-mRNA-1 |
| chr5_2 | CDS | 48254713 | 48254845 | 48254713 | ID=Msa0773330-mRNA-1:cds;Parent=Msa0773330-mRNA-1 |
| chr5_2 | CDS | 48255251 | 48255335 | 48255251 | ID=Msa0773330-mRNA-1:cds;Parent=Msa0773330-mRNA-1 |
| chr5_2 | CDS | 48255386 | 48255630 | 48255386 | ID=Msa0773330-mRNA-1:cds;Parent=Msa0773330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
