AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0775360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0775360 MtrunA17_Chr5g0429661 93.803 355 20 2 1 353 1 355 0.0 680
Msa0775360 MtrunA17_Chr3g0104501 56.284 183 56 8 11 172 5 184 2.78e-57 184
Msa0775360 MtrunA17_Chr4g0058991 62.963 135 48 1 109 243 197 329 2.73e-56 190
Msa0775360 MtrunA17_Chr3g0117511 45.418 251 101 8 119 350 181 414 1.40e-55 187
Msa0775360 MtrunA17_Chr7g0228531 61.417 127 46 2 119 245 218 341 6.49e-51 175
Msa0775360 MtrunA17_Chr7g0228481 57.480 127 51 2 119 245 218 341 5.87e-45 159
Msa0775360 MtrunA17_Chr7g0238631 62.136 103 39 0 119 221 111 213 1.28e-40 150
Msa0775360 MtrunA17_Chr3g0104491 41.004 239 78 8 171 352 17 249 1.57e-39 141
Msa0775360 MtrunA17_Chr7g0233061 53.968 126 56 1 120 245 179 302 2.09e-39 143
Msa0775360 MtrunA17_Chr7g0228401 44.805 154 53 3 120 248 254 400 3.68e-39 145
Msa0775360 MtrunA17_Chr3g0139671 44.375 160 70 2 119 276 83 225 7.71e-39 147
Msa0775360 MtrunA17_Chr1g0177901 56.140 114 49 1 132 245 5 117 1.37e-38 136
Msa0775360 MtrunA17_Chr1g0157731 56.311 103 45 0 119 221 89 191 2.15e-37 142
Msa0775360 MtrunA17_Chr5g0397841 57.732 97 41 0 119 215 108 204 8.49e-35 132
Msa0775360 MtrunA17_Chr5g0397841 36.697 109 64 3 111 214 44 152 1.28e-11 65.5
Msa0775360 MtrunA17_Chr4g0008551 53.398 103 48 0 120 222 37 139 1.67e-34 129
Msa0775360 MtrunA17_Chr3g0133601 50.980 102 50 0 120 221 36 137 8.15e-33 122
Msa0775360 MtrunA17_Chr4g0053431 50.962 104 51 0 120 223 4 107 8.54e-33 123
Msa0775360 MtrunA17_Chr2g0323351 34.298 242 122 8 119 331 12 245 1.91e-31 119
Msa0775360 MtrunA17_Chr5g0401731 48.077 104 54 0 120 223 14 117 3.70e-31 120
Msa0775360 MtrunA17_Chr4g0042501 44.853 136 72 1 102 234 86 221 3.91e-31 122
Msa0775360 MtrunA17_Chr5g0417621 44.118 136 71 1 102 232 115 250 7.52e-30 118
Msa0775360 MtrunA17_Chr4g0022901 44.444 117 62 2 107 221 1 116 9.45e-30 115
Msa0775360 MtrunA17_Chr8g0342541 49.515 103 49 2 121 221 14 115 6.53e-29 114
Msa0775360 MtrunA17_Chr6g0454921 44.231 104 58 0 120 223 14 117 6.69e-29 111
Msa0775360 MtrunA17_Chr6g0480581 34.762 210 115 6 118 313 1 202 8.14e-29 112
Msa0775360 MtrunA17_Chr3g0125801 38.418 177 95 2 111 279 6 176 1.41e-28 112
Msa0775360 MtrunA17_Chr8g0385321 46.226 106 55 2 121 224 14 119 1.46e-28 112
Msa0775360 MtrunA17_Chr5g0437321 47.959 98 51 0 120 217 18 115 1.65e-28 112
Msa0775360 MtrunA17_Chr8g0342521 50.485 103 48 2 121 221 14 115 2.01e-28 113
Msa0775360 MtrunA17_Chr5g0434571 45.255 137 60 4 89 221 26 151 2.52e-28 113
Msa0775360 MtrunA17_Chr2g0281071 43.966 116 64 1 107 221 1 116 3.01e-28 112
Msa0775360 MtrunA17_Chr1g0193801 46.154 104 55 1 119 221 12 115 3.18e-28 113
Msa0775360 MtrunA17_Chr5g0397231 48.454 97 49 1 121 216 14 110 3.70e-28 112
Msa0775360 MtrunA17_Chr4g0022911 46.602 103 52 2 121 221 15 116 4.06e-28 111
Msa0775360 MtrunA17_Chr5g0410961 45.098 102 55 1 121 221 14 115 4.84e-28 112
Msa0775360 MtrunA17_Chr8g0342481 49.038 104 49 3 121 221 14 116 5.47e-28 113
Msa0775360 MtrunA17_Chr4g0022931 47.573 103 51 2 121 221 15 116 6.46e-28 110
Msa0775360 MtrunA17_Chr4g0048511 44.444 117 62 2 107 221 1 116 7.13e-28 112
Msa0775360 MtrunA17_Chr2g0309911 46.602 103 52 2 121 221 13 114 7.86e-28 110
Msa0775360 MtrunA17_Chr5g0435101 47.573 103 51 2 121 221 13 114 8.65e-28 108
Msa0775360 MtrunA17_Chr7g0254261 42.073 164 81 2 116 265 84 247 9.94e-28 111
Msa0775360 MtrunA17_Chr3g0099131 51.887 106 47 3 119 221 41 145 1.18e-27 113
Msa0775360 MtrunA17_Chr4g0039971 45.763 118 60 3 106 221 1 116 1.21e-27 111
Msa0775360 MtrunA17_Chr1g0193371 45.714 105 54 2 119 221 12 115 1.26e-27 111
Msa0775360 MtrunA17_Chr2g0330041 46.602 103 52 2 121 221 14 115 1.30e-27 112
Msa0775360 MtrunA17_Chr3g0117091 45.714 105 54 2 119 221 12 115 1.49e-27 110
Msa0775360 MtrunA17_Chr6g0460661 47.525 101 53 0 121 221 16 116 1.54e-27 106
Msa0775360 MtrunA17_Chr8g0349261 47.748 111 56 1 107 215 1 111 1.63e-27 109
Msa0775360 MtrunA17_Chr4g0057031 51.020 98 45 2 121 216 14 110 1.71e-27 108
Msa0775360 MtrunA17_Chr4g0030881 43.333 120 60 2 115 226 3 122 1.94e-27 108
Msa0775360 MtrunA17_Chr3g0110351 50.476 105 49 2 119 221 12 115 2.03e-27 109
Msa0775360 MtrunA17_Chr4g0055981 46.602 103 54 1 115 216 51 153 2.52e-27 107
Msa0775360 MtrunA17_Chr1g0211161 45.714 105 54 2 119 221 13 116 2.59e-27 107
Msa0775360 MtrunA17_Chr6g0452271 32.418 182 111 3 121 301 14 184 2.60e-27 110
Msa0775360 MtrunA17_Chr3g0080861 49.057 106 50 3 118 220 36 140 2.81e-27 112
Msa0775360 MtrunA17_Chr4g0042671 41.538 130 70 2 119 242 12 141 3.48e-27 110
Msa0775360 MtrunA17_Chr7g0271241 49.495 99 47 2 119 215 12 109 3.73e-27 110
Msa0775360 MtrunA17_Chr3g0115821 47.619 105 52 2 119 221 12 115 4.76e-27 109
Msa0775360 MtrunA17_Chr4g0044421 37.584 149 89 2 121 268 14 159 5.80e-27 105
Msa0775360 MtrunA17_Chr2g0328771 45.714 105 54 2 119 221 20 123 6.44e-27 108
Msa0775360 MtrunA17_Chr3g0103281 45.763 118 62 2 107 223 1 117 6.58e-27 108
Msa0775360 MtrunA17_Chr8g0387421 46.392 97 51 1 121 216 14 110 6.62e-27 108
Msa0775360 MtrunA17_Chr3g0088461 41.880 117 67 1 106 221 9 125 6.72e-27 108
Msa0775360 MtrunA17_Chr7g0270891 44.231 104 57 1 119 221 12 115 7.34e-27 109
Msa0775360 MtrunA17_Chr6g0460671 42.400 125 66 1 97 221 81 199 8.88e-27 108
Msa0775360 MtrunA17_Chr8g0354661 47.170 106 53 2 118 221 36 140 9.03e-27 110
Msa0775360 MtrunA17_Chr1g0168661 51.000 100 46 2 117 214 19 117 1.29e-26 106
Msa0775360 MtrunA17_Chr4g0037141 45.631 103 53 2 121 221 14 115 1.37e-26 107
Msa0775360 MtrunA17_Chr4g0058631 43.269 104 58 1 119 221 12 115 1.64e-26 108
Msa0775360 MtrunA17_Chr4g0032401 43.243 111 62 1 112 221 10 120 1.79e-26 107
Msa0775360 MtrunA17_Chr1g0186061 48.077 104 51 2 121 222 22 124 1.90e-26 105
Msa0775360 MtrunA17_Chr3g0131121 38.095 147 82 5 121 264 14 154 4.12e-26 105
Msa0775360 MtrunA17_Chr7g0217741 49.000 100 48 2 119 216 12 110 4.71e-26 105
Msa0775360 MtrunA17_Chr7g0261281 43.846 130 67 4 119 243 12 140 6.56e-26 105
Msa0775360 MtrunA17_Chr5g0395281 44.762 105 55 2 119 221 12 115 7.12e-26 105
Msa0775360 MtrunA17_Chr2g0327821 44.643 112 59 2 117 226 4 114 8.09e-26 103
Msa0775360 MtrunA17_Chr1g0167661 39.665 179 93 6 119 290 12 182 1.01e-25 103
Msa0775360 MtrunA17_Chr2g0323411 45.192 104 56 1 119 221 12 115 2.72e-25 104
Msa0775360 MtrunA17_Chr7g0228891 46.667 105 53 2 119 221 12 115 2.73e-25 103
Msa0775360 MtrunA17_Chr8g0346561 46.465 99 52 1 119 216 12 110 3.82e-25 103
Msa0775360 MtrunA17_Chr1g0154031 45.714 105 54 2 119 221 76 179 4.92e-25 105
Msa0775360 MtrunA17_Chr7g0233151 60.000 75 28 1 171 245 1 73 5.85e-25 99.8
Msa0775360 MtrunA17_Chr1g0192411 47.115 104 54 1 119 221 12 115 8.32e-25 104
Msa0775360 MtrunA17_Chr4g0070611 45.545 101 54 1 117 216 10 110 9.74e-25 102
Msa0775360 MtrunA17_Chr5g0417821 44.860 107 58 1 119 224 7 113 1.02e-24 102
Msa0775360 MtrunA17_Chr1g0209661 42.308 104 59 1 119 221 27 130 1.37e-24 102
Msa0775360 MtrunA17_Chr1g0203411 48.454 97 47 2 121 215 14 109 1.48e-24 101
Msa0775360 MtrunA17_Chr4g0068061 46.667 105 53 2 119 221 12 115 2.64e-24 101
Msa0775360 MtrunA17_Chr7g0228231 41.525 118 66 2 121 237 16 131 2.70e-24 99.0
Msa0775360 MtrunA17_Chr4g0070641 45.098 102 55 1 115 215 8 109 3.44e-24 97.4
Msa0775360 MtrunA17_Chr4g0022891 39.062 128 74 3 121 246 14 139 4.26e-24 99.0
Msa0775360 MtrunA17_Chr7g0275911 44.444 99 54 1 119 216 12 110 4.31e-24 99.4
Msa0775360 MtrunA17_Chr1g0180391 46.939 98 49 2 119 214 19 115 4.35e-24 99.0
Msa0775360 MtrunA17_Chr4g0013361 40.152 132 76 3 121 250 12 142 5.13e-24 100
Msa0775360 MtrunA17_Chr1g0167691 32.083 240 145 8 119 347 12 244 5.44e-24 99.4
Msa0775360 MtrunA17_Chr8g0334881 44.545 110 59 2 113 220 4 113 6.11e-24 100
Msa0775360 MtrunA17_Chr7g0240821 42.609 115 62 3 124 235 6 119 6.52e-24 98.2
Msa0775360 MtrunA17_Chr5g0400821 41.803 122 68 3 121 240 14 134 8.10e-24 99.8
Msa0775360 MtrunA17_Chr6g0453471 44.231 104 57 1 119 221 12 115 1.15e-23 100
Msa0775360 MtrunA17_Chr2g0327351 38.095 147 80 4 121 258 14 158 1.34e-23 99.4
Msa0775360 MtrunA17_Chr8g0343831 47.423 97 50 1 121 216 10 106 1.34e-23 98.2
Msa0775360 MtrunA17_Chr6g0450101 43.478 115 61 3 121 233 16 128 1.36e-23 97.1
Msa0775360 MtrunA17_Chr1g0152011 40.000 120 68 3 121 236 14 133 1.39e-23 99.8
Msa0775360 MtrunA17_Chr4g0054391 37.405 131 79 3 107 235 1 130 1.74e-23 98.6
Msa0775360 MtrunA17_Chr1g0194301 34.375 160 100 3 113 270 27 183 1.89e-23 98.2
Msa0775360 MtrunA17_Chr2g0322521 51.852 108 48 3 119 223 29 135 3.46e-23 99.4
Msa0775360 MtrunA17_Chr1g0187761 40.559 143 73 4 119 259 12 144 3.60e-23 97.1
Msa0775360 MtrunA17_Chr5g0434931 38.938 113 68 1 114 225 30 142 3.70e-23 97.4
Msa0775360 MtrunA17_Chr7g0274581 44.792 96 52 1 121 215 14 109 5.64e-23 95.1
Msa0775360 MtrunA17_Chr5g0441141 45.631 103 52 3 121 220 14 115 5.68e-23 96.7
Msa0775360 MtrunA17_Chr5g0440781 45.631 103 52 3 121 220 14 115 5.98e-23 94.7
Msa0775360 MtrunA17_Chr5g0440761 45.631 103 52 3 121 220 14 115 8.55e-23 96.3
Msa0775360 MtrunA17_Chr4g0028311 32.240 183 109 6 107 282 1 175 9.95e-23 97.1
Msa0775360 MtrunA17_Chr3g0121241 43.434 99 55 1 119 216 42 140 1.06e-22 96.7
Msa0775360 MtrunA17_Chr4g0022881 41.837 98 54 2 121 216 14 110 1.33e-22 94.7
Msa0775360 MtrunA17_Chr7g0228991 43.299 97 54 1 121 216 31 127 1.39e-22 95.9
Msa0775360 MtrunA17_Chr4g0060721 39.496 119 71 1 121 238 15 133 1.51e-22 96.7
Msa0775360 MtrunA17_Chr2g0311221 41.818 110 62 2 108 216 4 112 1.63e-22 96.7
Msa0775360 MtrunA17_Chr5g0441131 43.137 102 56 2 121 220 11 112 2.38e-22 92.8
Msa0775360 MtrunA17_Chr3g0135311 41.322 121 68 3 121 239 14 133 2.40e-22 96.3
Msa0775360 MtrunA17_Chr5g0434911 40.566 106 62 1 121 225 23 128 3.21e-22 94.7
Msa0775360 MtrunA17_Chr7g0264641 40.441 136 77 4 121 254 14 147 4.55e-22 94.4
Msa0775360 MtrunA17_Chr1g0151941 32.571 175 85 5 117 280 10 162 4.91e-22 93.6
Msa0775360 MtrunA17_Chr7g0220341 38.889 126 63 3 95 216 10 125 5.58e-22 94.0
Msa0775360 MtrunA17_Chr7g0247131 52.564 78 35 1 146 221 4 81 5.66e-22 94.0
Msa0775360 MtrunA17_Chr6g0470971 38.889 108 65 1 121 227 16 123 9.33e-22 93.6
Msa0775360 MtrunA17_Chr7g0217221 44.000 100 55 1 117 215 10 109 9.38e-22 93.2
Msa0775360 MtrunA17_Chr1g0203441 39.048 105 63 1 121 224 15 119 1.29e-21 93.2
Msa0775360 MtrunA17_Chr4g0046181 68.519 54 17 0 119 172 219 272 1.45e-21 93.2
Msa0775360 MtrunA17_Chr6g0453211 43.000 100 56 1 117 215 10 109 2.34e-21 93.2
Msa0775360 MtrunA17_Chr3g0092401 39.823 113 67 1 121 232 15 127 2.99e-21 92.8
Msa0775360 MtrunA17_Chr1g0194951 45.714 105 54 2 119 221 12 115 4.98e-21 92.8
Msa0775360 MtrunA17_Chr4g0072751 39.655 116 68 2 121 234 14 129 6.29e-21 92.4
Msa0775360 MtrunA17_Chr5g0434841 37.815 119 71 2 106 221 5 123 6.66e-21 92.0
Msa0775360 MtrunA17_Chr5g0434831 39.450 109 65 1 114 221 2 110 9.38e-21 88.6
Msa0775360 MtrunA17_Chr1g0194291 31.875 160 108 1 111 269 13 172 1.19e-20 90.1
Msa0775360 MtrunA17_Chr5g0421201 56.410 78 24 2 173 250 12 79 1.84e-20 87.8
Msa0775360 MtrunA17_Chr2g0293911 39.669 121 69 2 119 238 24 141 2.14e-20 90.5
Msa0775360 MtrunA17_Chr4g0068921 38.333 120 72 2 96 214 2 120 3.20e-20 87.4
Msa0775360 MtrunA17_Chr5g0416341 41.837 98 57 0 124 221 29 126 3.29e-20 91.3
Msa0775360 MtrunA17_Chr6g0487491 30.244 205 103 8 107 297 1 179 3.89e-20 88.6
Msa0775360 MtrunA17_Chr8g0360111 42.105 95 54 1 121 214 27 121 6.80e-20 88.2
Msa0775360 MtrunA17_Chr7g0254411 35.833 120 76 1 121 239 14 133 1.06e-19 88.6
Msa0775360 MtrunA17_Chr3g0099141 47.059 85 44 1 119 202 40 124 1.47e-19 84.0
Msa0775360 MtrunA17_Chr7g0233161 67.925 53 17 0 120 172 298 350 2.00e-19 88.2
Msa0775360 MtrunA17_Chr8g0362231 36.134 119 73 1 124 242 25 140 4.44e-19 87.8
Msa0775360 MtrunA17_Chr7g0238651 34.752 141 84 2 121 253 7 147 4.45e-19 87.4
Msa0775360 MtrunA17_Chr2g0323321 46.341 82 41 2 119 198 11 91 1.45e-18 80.5
Msa0775360 MtrunA17_Chr7g0269831 48.571 105 51 2 119 221 12 115 1.69e-18 85.5
Msa0775360 MtrunA17_Chr8g0342461 48.718 78 36 3 121 195 14 90 4.86e-18 79.7
Msa0775360 MtrunA17_Chr4g0042611 46.753 77 40 1 119 194 12 88 5.44e-18 78.2
Msa0775360 MtrunA17_Chr8g0342471 47.436 78 37 3 121 195 14 90 1.78e-17 78.2
Msa0775360 MtrunA17_Chr8g0342531 46.753 77 38 2 121 195 14 89 7.29e-17 77.4
Msa0775360 MtrunA17_Chr8g0342511 45.333 75 38 2 121 193 14 87 6.62e-16 72.4
Msa0775360 MtrunA17_Chr5g0395221 40.260 77 45 1 119 194 12 88 1.59e-15 71.2
Msa0775360 MtrunA17_Chr5g0434901 45.455 66 36 0 154 219 9 74 1.91e-15 72.0
Msa0775360 MtrunA17_Chr3g0093811 42.254 71 41 0 154 224 18 88 6.98e-15 73.9
Msa0775360 MtrunA17_Chr6g0483051 35.593 118 75 1 121 238 120 236 2.35e-14 74.3
Msa0775360 MtrunA17_Chr6g0483051 36.458 96 60 1 119 214 67 161 5.42e-13 70.1
Msa0775360 MtrunA17_Chr7g0229101 43.939 66 37 0 154 219 8 73 4.43e-14 70.5
Msa0775360 MtrunA17_Chr2g0294811 42.353 85 48 1 119 202 12 96 5.98e-14 67.8
Msa0775360 MtrunA17_Chr5g0425591 43.902 82 42 3 121 199 11 91 6.26e-14 67.0
Msa0775360 MtrunA17_Chr6g0453751 41.053 95 46 4 115 199 16 110 2.27e-13 66.6
Msa0775360 MtrunA17_Chr7g0229131 40.299 67 40 0 154 220 8 74 3.05e-12 64.3
Msa0775360 MtrunA17_Chr7g0274481 40.000 90 52 2 118 206 3 91 8.66e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0775360 AT5G58850.1 46.863 271 115 5 111 352 95 365 3.81e-67 218
Msa0775360 AT5G11050.1 46.570 277 108 7 110 352 94 364 7.69e-66 214
Msa0775360 AT4G18770.1 44.978 229 102 6 42 263 141 352 2.16e-58 195
Msa0775360 AT3G27785.1 63.194 144 50 1 109 252 177 317 1.49e-57 193
Msa0775360 AT5G40360.1 47.742 155 81 0 111 265 148 302 7.85e-48 165
Msa0775360 AT3G09370.3 61.538 104 40 0 119 222 141 244 4.26e-41 151
Msa0775360 AT3G09370.1 61.538 104 40 0 119 222 128 231 4.27e-41 150
Msa0775360 AT3G09370.2 61.538 104 40 0 119 222 133 236 4.35e-41 150
Msa0775360 AT5G02320.1 61.165 103 40 0 119 221 125 227 2.01e-40 149
Msa0775360 AT5G02320.2 61.165 103 40 0 119 221 125 227 2.01e-40 149
Msa0775360 AT5G02320.3 61.165 103 40 0 119 221 65 167 2.16e-40 149
Msa0775360 AT2G25230.1 49.242 132 60 1 121 252 26 150 3.23e-37 134
Msa0775360 AT5G11510.5 53.398 103 48 0 119 221 79 181 1.11e-36 140
Msa0775360 AT5G11510.2 53.398 103 48 0 119 221 79 181 1.12e-36 141
Msa0775360 AT5G11510.3 53.398 103 48 0 119 221 79 181 1.18e-36 141
Msa0775360 AT5G11510.1 53.398 103 48 0 119 221 79 181 1.18e-36 141
Msa0775360 AT5G11510.4 53.398 103 48 0 119 221 79 181 1.18e-36 141
Msa0775360 AT4G32730.5 53.398 103 48 0 119 221 85 187 9.88e-36 138
Msa0775360 AT4G32730.4 53.398 103 48 0 119 221 85 187 9.88e-36 138
Msa0775360 AT4G32730.3 53.398 103 48 0 119 221 85 187 9.88e-36 138
Msa0775360 AT4G32730.2 53.398 103 48 0 119 221 85 187 9.88e-36 138
Msa0775360 AT4G32730.1 53.398 103 48 0 119 221 85 187 1.26e-35 137
Msa0775360 AT5G40430.1 45.522 134 65 2 119 252 52 177 3.04e-34 127
Msa0775360 AT4G00540.2 57.547 106 42 2 119 221 101 206 8.69e-32 124
Msa0775360 AT3G55730.1 51.961 102 49 0 120 221 55 156 1.68e-31 123
Msa0775360 AT4G00540.1 57.547 106 42 2 119 221 99 204 1.72e-31 123
Msa0775360 AT3G09230.1 51.961 102 49 0 120 221 54 155 2.09e-30 119
Msa0775360 AT3G50060.1 46.154 104 56 0 120 223 5 108 2.64e-30 117
Msa0775360 AT3G11440.2 50.926 108 51 2 118 223 40 147 4.24e-30 120
Msa0775360 AT1G17950.1 41.781 146 81 2 121 262 5 150 5.15e-30 115
Msa0775360 AT3G29020.1 49.123 114 55 1 113 223 57 170 5.40e-30 115
Msa0775360 AT3G11440.3 50.926 108 51 2 118 223 40 147 1.04e-29 120
Msa0775360 AT3G11440.4 50.926 108 51 2 118 223 40 147 1.04e-29 120
Msa0775360 AT3G11440.1 50.926 108 51 2 118 223 40 147 1.04e-29 120
Msa0775360 AT5G67300.1 48.039 102 53 0 120 221 5 106 1.43e-29 115
Msa0775360 AT4G37260.1 47.115 104 55 0 120 223 12 115 1.51e-29 116
Msa0775360 AT3G29020.2 49.123 114 55 1 113 223 59 172 2.18e-29 115
Msa0775360 AT2G23290.1 46.018 113 59 1 111 223 5 115 3.63e-29 114
Msa0775360 AT4G26930.1 46.154 104 55 1 118 220 18 121 7.84e-29 115
Msa0775360 AT1G69560.1 36.413 184 102 3 94 269 80 256 8.98e-29 114
Msa0775360 AT1G69560.2 36.413 184 102 3 94 269 96 272 8.98e-29 114
Msa0775360 AT3G28470.1 47.748 111 56 2 107 216 1 110 9.35e-29 114
Msa0775360 AT2G32460.1 45.385 130 62 4 97 223 1 124 1.48e-28 116
Msa0775360 AT2G39880.1 49.020 102 52 0 120 221 49 150 1.88e-28 114
Msa0775360 AT2G32460.2 50.000 108 50 3 119 223 6 112 2.41e-28 115
Msa0775360 AT1G26780.1 48.760 121 57 2 118 233 95 215 3.14e-28 111
Msa0775360 AT5G06100.1 49.074 108 53 2 118 223 31 138 3.86e-28 114
Msa0775360 AT1G26780.2 48.760 121 57 2 118 233 95 215 4.20e-28 112
Msa0775360 AT5G26660.1 44.954 109 57 2 119 225 12 119 4.21e-28 112
Msa0775360 AT5G14750.1 35.135 185 108 4 121 297 18 198 5.44e-28 108
Msa0775360 AT4G13480.1 45.865 133 62 4 115 245 2 126 8.49e-28 110
Msa0775360 AT3G12720.1 45.631 103 53 2 121 221 24 125 8.51e-28 111
Msa0775360 AT1G63910.1 49.485 97 48 1 121 216 14 110 8.98e-28 112
Msa0775360 AT5G06100.5 49.074 108 53 2 118 223 31 138 9.74e-28 114
Msa0775360 AT5G06100.2 49.074 108 53 2 118 223 31 138 9.74e-28 114
Msa0775360 AT5G06100.3 49.074 108 53 2 118 223 31 138 9.74e-28 114
Msa0775360 AT5G06100.4 49.074 108 53 2 118 223 31 138 9.74e-28 114
Msa0775360 AT1G74080.1 50.980 102 49 1 116 216 9 110 1.06e-27 111
Msa0775360 AT1G09540.1 46.789 109 55 2 119 225 12 119 1.25e-27 111
Msa0775360 AT4G01680.1 44.231 104 57 1 119 221 12 115 1.40e-27 111
Msa0775360 AT1G57560.2 46.667 105 53 2 119 221 12 115 1.43e-27 109
Msa0775360 AT1G57560.1 46.667 105 53 2 119 221 12 115 1.54e-27 110
Msa0775360 AT1G66230.1 52.000 100 45 2 119 216 12 110 2.17e-27 109
Msa0775360 AT3G13890.2 44.118 102 56 1 121 221 14 115 2.41e-27 110
Msa0775360 AT4G28110.1 46.667 105 55 1 121 224 14 118 2.48e-27 109
Msa0775360 AT1G68320.1 33.019 212 122 7 117 311 17 225 3.00e-27 108
Msa0775360 AT5G07700.1 47.170 106 55 1 117 221 10 115 3.16e-27 110
Msa0775360 AT5G07700.2 47.170 106 55 1 117 221 10 115 3.16e-27 110
Msa0775360 AT4G01680.3 44.231 104 57 1 119 221 12 115 3.17e-27 107
Msa0775360 AT5G07690.1 49.505 101 50 1 117 216 10 110 4.14e-27 109
Msa0775360 AT4G33450.1 49.524 105 50 1 121 222 19 123 5.21e-27 107
Msa0775360 AT5G16770.4 46.154 104 55 1 119 221 12 115 5.26e-27 109
Msa0775360 AT5G16770.3 46.154 104 55 1 119 221 12 115 5.26e-27 109
Msa0775360 AT1G18570.1 46.154 104 55 1 119 221 13 116 5.28e-27 109
Msa0775360 AT1G74430.1 44.444 108 59 1 119 225 12 119 5.74e-27 108
Msa0775360 AT5G16770.1 46.154 104 55 1 119 221 12 115 7.58e-27 108
Msa0775360 AT5G16770.2 46.154 104 55 1 119 221 12 115 7.58e-27 108
Msa0775360 AT4G05100.1 43.966 116 64 1 107 221 1 116 7.75e-27 108
Msa0775360 AT5G61420.2 48.515 101 51 1 117 216 10 110 8.85e-27 109
Msa0775360 AT5G55020.1 44.231 104 57 1 118 220 25 128 9.96e-27 111
Msa0775360 AT4G38620.1 45.631 103 53 2 121 221 14 115 1.03e-26 107
Msa0775360 AT4G12350.1 48.544 103 50 2 121 221 14 115 1.08e-26 107
Msa0775360 AT3G23250.1 35.829 187 94 5 119 297 12 180 1.11e-26 107
Msa0775360 AT3G61250.1 51.515 99 45 2 119 215 12 109 1.36e-26 107
Msa0775360 AT5G17800.1 44.828 116 62 1 116 229 88 203 1.41e-26 108
Msa0775360 AT1G35515.1 45.098 102 55 1 121 221 14 115 1.67e-26 105
Msa0775360 AT3G13890.1 41.441 111 55 2 121 221 14 124 1.88e-26 108
Msa0775360 AT4G21440.1 45.192 104 56 1 119 221 12 115 2.05e-26 108
Msa0775360 AT5G10280.1 45.714 105 54 2 119 221 12 115 2.61e-26 107
Msa0775360 AT4G01680.2 41.379 116 55 2 119 221 12 127 3.02e-26 107
Msa0775360 AT2G26960.1 47.573 103 53 1 119 220 20 122 3.19e-26 108
Msa0775360 AT4G22680.1 47.573 103 51 2 121 221 14 115 3.29e-26 105
Msa0775360 AT5G59780.3 43.966 116 62 2 113 226 2 116 3.39e-26 105
Msa0775360 AT3G13540.1 30.705 241 133 8 109 320 13 248 3.72e-26 105
Msa0775360 AT3G24310.1 45.833 120 57 3 121 238 20 133 3.79e-26 105
Msa0775360 AT5G65230.1 47.619 105 52 2 119 221 12 115 3.80e-26 106
Msa0775360 AT5G56110.1 46.610 118 61 2 107 223 1 117 4.03e-26 106
Msa0775360 AT3G08500.1 46.154 104 55 1 119 221 30 133 4.23e-26 107
Msa0775360 AT3G02940.2 45.192 104 56 1 119 221 12 115 4.79e-26 106
Msa0775360 AT3G46130.1 46.296 108 55 2 121 226 11 117 5.41e-26 105
Msa0775360 AT1G73410.1 51.402 107 49 1 121 224 6 112 5.92e-26 104
Msa0775360 AT3G02940.1 45.192 104 56 1 119 221 12 115 6.86e-26 106
Msa0775360 AT3G02940.3 45.192 104 56 1 119 221 12 115 6.86e-26 106
Msa0775360 AT1G73410.2 51.402 107 49 1 121 224 6 112 7.13e-26 103
Msa0775360 AT5G12870.1 44.118 102 56 1 121 221 20 121 8.86e-26 105
Msa0775360 AT1G22640.1 43.689 103 55 2 121 221 14 115 1.50e-25 103
Msa0775360 AT5G60890.1 46.226 106 56 1 117 221 10 115 1.56e-25 104
Msa0775360 AT5G35550.1 29.876 241 149 6 109 334 4 239 1.75e-25 103
Msa0775360 AT4G09460.1 42.718 103 56 2 121 221 14 115 2.19e-25 102
Msa0775360 AT5G16600.1 49.524 105 50 2 119 221 12 115 2.31e-25 104
Msa0775360 AT3G01530.1 44.643 112 59 2 111 220 17 127 3.20e-25 101
Msa0775360 AT2G26950.1 44.037 109 52 2 117 220 14 118 3.56e-25 105
Msa0775360 AT5G15310.4 47.475 99 51 1 119 216 12 110 4.49e-25 102
Msa0775360 AT3G01140.2 47.959 98 50 1 119 215 12 109 4.91e-25 104
Msa0775360 AT5G15310.1 45.192 104 56 1 119 221 12 115 5.07e-25 103
Msa0775360 AT5G15310.2 45.192 104 56 1 119 221 12 115 5.35e-25 103
Msa0775360 AT5G54230.1 44.118 102 56 1 121 221 14 115 7.26e-25 103
Msa0775360 AT3G01140.1 47.959 98 50 1 119 215 55 152 7.95e-25 104
Msa0775360 AT4G34990.1 43.396 106 59 1 121 225 14 119 9.10e-25 102
Msa0775360 AT5G40330.1 41.284 109 63 1 109 216 2 110 9.26e-25 100
Msa0775360 AT5G52600.1 41.525 118 67 2 112 227 5 122 9.34e-25 100
Msa0775360 AT3G27810.1 43.548 124 67 2 121 243 22 143 9.99e-25 100
Msa0775360 AT4G17785.2 42.735 117 64 2 107 221 1 116 1.26e-24 103
Msa0775360 AT4G17785.1 42.735 117 64 2 107 221 1 116 1.45e-24 103
Msa0775360 AT3G53200.1 43.925 107 57 2 117 221 7 112 1.51e-24 100
Msa0775360 AT1G06180.1 45.299 117 59 3 119 231 12 127 1.79e-24 100
Msa0775360 AT5G40350.1 34.848 198 113 7 121 313 19 205 1.93e-24 99.8
Msa0775360 AT5G62320.1 44.737 114 55 3 119 224 13 126 2.00e-24 100
Msa0775360 AT1G34670.1 44.231 104 57 1 119 221 12 115 3.32e-24 102
Msa0775360 AT5G57620.1 42.241 116 65 2 121 234 14 129 3.77e-24 101
Msa0775360 AT1G16490.1 43.333 120 64 3 121 237 16 134 4.02e-24 100
Msa0775360 AT2G47190.1 41.463 123 70 2 111 232 13 134 4.07e-24 100
Msa0775360 AT2G16720.1 41.748 103 57 2 121 221 14 115 5.32e-24 99.8
Msa0775360 AT5G39700.1 38.583 127 77 1 95 220 29 155 7.35e-24 97.4
Msa0775360 AT2G31180.1 32.105 190 121 3 121 308 14 197 7.91e-24 99.0
Msa0775360 AT5G23000.1 37.037 162 93 4 107 266 1 155 9.33e-24 100
Msa0775360 AT3G27920.1 45.361 97 52 1 121 216 16 112 9.55e-24 98.2
Msa0775360 AT3G48920.1 44.554 101 55 1 121 220 20 120 2.84e-23 97.8
Msa0775360 AT4G25560.1 41.593 113 65 1 110 221 1 113 2.85e-23 98.2
Msa0775360 AT5G62470.1 41.379 116 67 1 121 236 14 128 3.55e-23 99.4
Msa0775360 AT1G18710.1 42.453 106 60 1 121 225 14 119 3.78e-23 97.4
Msa0775360 AT3G60460.1 45.283 106 56 2 117 220 9 114 6.02e-23 97.8
Msa0775360 AT3G30210.1 29.412 221 140 8 121 339 29 235 8.06e-23 96.7
Msa0775360 AT5G14340.1 43.810 105 56 2 119 221 24 127 1.02e-22 96.7
Msa0775360 AT1G48000.1 41.176 119 66 2 121 238 34 149 1.02e-22 95.9
Msa0775360 AT3G49690.1 44.545 110 57 3 121 226 14 123 1.35e-22 97.1
Msa0775360 AT1G56160.1 41.748 103 57 2 121 221 16 117 1.56e-22 96.3
Msa0775360 AT3G62610.1 44.118 102 56 1 121 221 14 115 2.77e-22 96.7
Msa0775360 AT1G79180.1 38.655 119 70 2 121 237 16 133 3.94e-22 95.1
Msa0775360 AT5G49330.1 44.231 104 57 1 119 221 12 115 5.67e-22 95.5
Msa0775360 AT1G74650.1 42.241 116 65 2 107 221 1 115 9.75e-22 94.7
Msa0775360 AT1G25340.1 43.689 103 55 2 121 221 20 121 9.94e-22 94.0
Msa0775360 AT5G62470.2 41.026 117 67 2 121 236 14 129 1.30e-21 94.7
Msa0775360 AT5G65790.1 44.545 110 57 3 121 226 14 123 1.65e-21 94.7
Msa0775360 AT5G26660.2 48.611 72 37 0 154 225 17 88 3.30e-21 93.2
Msa0775360 AT3G47600.1 42.157 102 58 1 121 221 14 115 3.53e-21 93.2
Msa0775360 AT1G25340.2 41.584 101 55 1 121 221 20 116 4.32e-21 92.0
Msa0775360 AT5G14750.3 33.113 151 90 3 154 297 18 164 6.82e-21 89.0
Msa0775360 AT4G37780.1 37.273 110 67 2 121 228 14 123 6.98e-21 92.0
Msa0775360 AT5G49620.1 42.453 106 60 1 110 214 17 122 7.48e-21 92.0
Msa0775360 AT1G66370.1 37.931 116 71 1 114 228 3 118 7.57e-21 90.9
Msa0775360 AT1G25340.3 41.584 101 55 1 121 221 20 116 9.42e-21 91.7
Msa0775360 AT2G47460.1 42.157 102 58 1 121 221 14 115 9.65e-21 92.4
Msa0775360 AT3G28910.1 45.833 96 51 1 121 215 14 109 2.08e-20 90.9
Msa0775360 AT5G52260.1 34.868 152 71 3 121 270 14 139 2.25e-20 89.7
Msa0775360 AT1G08810.1 31.250 176 107 4 121 283 14 188 3.66e-20 89.4
Msa0775360 AT1G66380.1 44.118 102 56 1 115 215 4 105 4.50e-20 85.9
Msa0775360 AT3G06490.1 42.857 98 53 2 119 214 19 115 9.19e-20 89.0
Msa0775360 AT1G14350.2 38.938 113 68 1 124 235 28 140 9.29e-20 90.5
Msa0775360 AT1G14350.1 38.938 113 68 1 124 235 28 140 9.29e-20 90.5
Msa0775360 AT3G12820.1 39.252 107 62 2 121 225 16 121 1.03e-19 87.4
Msa0775360 AT1G56650.1 43.689 103 57 1 115 216 4 106 1.08e-19 87.4
Msa0775360 AT5G35550.2 47.368 76 40 0 154 229 53 128 1.46e-19 87.4
Msa0775360 AT2G02820.2 40.741 108 63 1 124 230 33 140 3.75e-19 89.0
Msa0775360 AT2G02820.1 40.741 108 63 1 124 230 33 140 4.11e-19 88.6
Msa0775360 AT2G02820.3 43.956 91 51 0 124 214 33 123 5.82e-19 87.0
Msa0775360 AT1G66390.1 44.118 102 56 1 115 215 4 105 6.26e-19 85.5
Msa0775360 AT5G40350.2 34.756 164 92 6 154 313 8 160 7.36e-19 83.2
Msa0775360 AT1G79180.2 31.126 151 70 2 121 237 16 166 8.33e-19 86.3
Msa0775360 AT2G36890.1 40.777 103 59 2 121 221 14 116 8.91e-19 85.9
Msa0775360 AT2G37630.1 32.335 167 104 4 123 280 6 172 1.07e-18 86.7
Msa0775360 AT3G27810.2 45.556 90 47 1 154 243 7 94 1.16e-18 82.8
Msa0775360 AT2G36890.2 40.777 103 59 2 121 221 55 157 1.88e-18 85.5
Msa0775360 AT5G59780.2 46.575 73 39 0 154 226 23 95 5.33e-18 82.0
Msa0775360 AT3G46130.3 46.575 73 39 0 154 226 13 85 1.71e-17 80.9
Msa0775360 AT5G49620.2 37.500 120 60 2 110 214 17 136 1.81e-17 82.4
Msa0775360 AT3G46130.4 46.575 73 39 0 154 226 23 95 1.84e-17 80.9
Msa0775360 AT3G53200.2 48.529 68 35 0 154 221 12 79 7.99e-17 78.6
Msa0775360 AT3G47600.2 40.659 91 51 1 131 221 22 109 2.31e-16 79.3
Msa0775360 AT3G12820.2 44.444 72 40 0 154 225 2 73 7.09e-16 75.5
Msa0775360 AT3G23250.2 34.532 139 68 3 165 297 2 123 1.75e-15 75.1
Msa0775360 AT3G18100.1 37.113 97 59 2 119 214 493 588 6.15e-15 76.6
Msa0775360 AT3G18100.1 36.170 94 60 0 121 214 546 639 3.70e-14 74.3
Msa0775360 AT5G14750.4 33.058 121 77 2 165 285 2 118 6.37e-15 71.6
Msa0775360 AT5G14750.2 33.058 121 77 2 165 285 2 118 6.37e-15 71.6
Msa0775360 AT3G18100.3 37.113 97 59 2 119 214 445 540 6.52e-15 76.6
Msa0775360 AT3G18100.3 36.170 94 60 0 121 214 498 591 3.62e-14 74.3
Msa0775360 AT3G18100.4 37.113 97 59 2 119 214 332 427 1.16e-14 75.5
Msa0775360 AT3G18100.4 36.170 94 60 0 121 214 385 478 6.20e-14 73.6
Msa0775360 AT3G18100.2 37.113 97 59 2 119 214 280 375 1.59e-14 75.1
Msa0775360 AT3G18100.2 36.170 94 60 0 121 214 333 426 8.53e-14 72.8
Msa0775360 AT1G71030.2 40.000 65 39 0 157 221 5 69 7.16e-14 69.7
Msa0775360 AT1G71030.1 40.000 65 39 0 157 221 19 83 8.55e-14 69.7
Msa0775360 AT1G22640.3 45.614 57 31 0 165 221 2 58 1.22e-13 69.3
Msa0775360 AT1G66380.3 47.619 63 33 0 154 216 11 73 1.07e-12 64.3
Msa0775360 AT1G18960.1 34.615 104 64 3 121 223 10 110 1.84e-11 64.7
Msa0775360 AT1G14350.3 40.000 75 44 1 162 235 23 97 5.89e-11 63.5
Msa0775360 AT1G14350.4 40.000 75 44 1 162 235 23 97 5.89e-11 63.5

Find 72 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCCAACGGTTTCCAATTT+TGG 0.083397 5_2:+52297221 None:intergenic
AAGCTTGATTCTTGAGTATT+TGG 0.147400 5_2:+52298698 None:intergenic
TCCAAGTGCATGTTGTAATT+TGG 0.158793 5_2:+52296814 None:intergenic
TCATTTGCGTCCTGATATTA+AGG 0.222411 5_2:-52298202 Msa0775360:intron
AGTATGTTCCCTTACTCTTA+TGG 0.253114 5_2:-52298743 Msa0775360:CDS
CTTTCATGGATAGATTCTTA+TGG 0.253266 5_2:-52298808 Msa0775360:CDS
AGCAATATGGCGATAGAAAA+TGG 0.260431 5_2:-52298287 Msa0775360:CDS
GTCAATGGCGTTAAAATCTT+TGG 0.273706 5_2:-52298857 Msa0775360:CDS
GTAGCTACACATGCCAAAAT+TGG 0.303292 5_2:-52297234 Msa0775360:CDS
ATCATTGGAATGCCACTAAA+AGG 0.314844 5_2:-52297152 Msa0775360:CDS
TTTCATGGATAGATTCTTAT+GGG 0.320364 5_2:-52298807 Msa0775360:CDS
CCAAGTGCATGTTGTAATTT+GGG 0.329240 5_2:+52296815 None:intergenic
CTTAAGGATATTCAAGGTTA+TGG 0.350445 5_2:-52298602 Msa0775360:CDS
TAAGGCACAATGTGGAAGTT+TGG 0.351661 5_2:+52298621 None:intergenic
GAATCAAGCTTTGTTGTTGA+TGG 0.356694 5_2:-52298686 Msa0775360:CDS
GCATGTTGTAATTTGGGTAT+TGG 0.376877 5_2:+52296821 None:intergenic
AACTTCCACATTGTGCCTTA+AGG 0.380633 5_2:-52298618 Msa0775360:CDS
ATAAAGTTGGTTAAGCAATA+TGG 0.389260 5_2:-52298300 Msa0775360:CDS
CAAATAGCTGAGAAGTTAGA+AGG 0.389483 5_2:-52298261 Msa0775360:CDS
AAATGTCAATGACCCTTTCA+TGG 0.400644 5_2:-52298822 Msa0775360:CDS
TTGTATGAAGTGTAATTCAT+TGG 0.411392 5_2:+52296915 None:intergenic
TCCATTGAAATCATGGTAAG+AGG 0.422796 5_2:-52298893 None:intergenic
ATATATCTAACCTTAATATC+AGG 0.434454 5_2:+52298192 None:intergenic
TGAGAGAGGTAAAGATCATA+AGG 0.438571 5_2:+52296763 None:intergenic
TTAAAGGAAACTGATAAAGT+TGG 0.449247 5_2:-52298313 Msa0775360:intron
AGCTGAGAAGTTAGAAGGAA+GGG 0.452156 5_2:-52298256 Msa0775360:CDS
GAGATAGCAAAGAAGATTCC+AGG 0.462177 5_2:-52297198 Msa0775360:CDS
ATGGTAAGAGGAGGAAATCA+TGG 0.470343 5_2:-52298881 Msa0775360:CDS
TTGTGCCTTAAGGATATTCA+AGG 0.475669 5_2:-52298608 Msa0775360:CDS
CATAACCTTGAATATCCTTA+AGG 0.482233 5_2:+52298603 None:intergenic
TGGTTGGAACCATAAGAGTA+AGG 0.488644 5_2:+52298734 None:intergenic
GCAATATGGCGATAGAAAAT+GGG 0.492969 5_2:-52298286 Msa0775360:CDS
TGCCAAAATTGGAAACCGTT+GGG 0.495529 5_2:-52297223 Msa0775360:CDS
AAGTGTCGCATGAGAGGAAG+AGG 0.497010 5_2:+52297002 None:intergenic
CCCAAATTACAACATGCACT+TGG 0.498733 5_2:-52296815 Msa0775360:CDS
GTTCCAACCATGAGTTTATG+TGG 0.505567 5_2:-52298721 Msa0775360:CDS
ATGCCAAAATTGGAAACCGT+TGG 0.505828 5_2:-52297224 Msa0775360:CDS
GGAGGAAATCATGGGGTCAA+TGG 0.507214 5_2:-52298872 Msa0775360:CDS
AGAGGTAAAGATCATAAGGA+AGG 0.510605 5_2:+52296767 None:intergenic
AGTTATCCTTCCCACAATGT+TGG 0.513482 5_2:+52298571 None:intergenic
GGTGAAAACACCAACATTGT+GGG 0.515105 5_2:-52298581 Msa0775360:CDS
CATAAGAATCTATCCATGAA+AGG 0.517939 5_2:+52298809 None:intergenic
AGGAAATTATTCATTGAGGT+AGG 0.519926 5_2:+52296787 None:intergenic
ATAAGAATCTATCCATGAAA+GGG 0.524626 5_2:+52298810 None:intergenic
TGGCCACATAAACTCATGGT+TGG 0.526915 5_2:+52298718 None:intergenic
GAAGAATGAAAATAATTCCA+AGG 0.528666 5_2:-52297103 Msa0775360:CDS
TAGCTGAGAAGTTAGAAGGA+AGG 0.540309 5_2:-52298257 Msa0775360:CDS
TGGTGAAAACACCAACATTG+TGG 0.554704 5_2:-52298582 Msa0775360:CDS
GAGAAGTTAGAAGGAAGGGT+TGG 0.557009 5_2:-52298252 Msa0775360:CDS
AGGAAGGAAATTATTCATTG+AGG 0.563206 5_2:+52296783 None:intergenic
TGGTAAGAGGAGGAAATCAT+GGG 0.576546 5_2:-52298880 Msa0775360:CDS
ATGAGAGGAAGAGGGTATGT+TGG 0.586332 5_2:+52297011 None:intergenic
TATTTGGCCACATAAACTCA+TGG 0.590477 5_2:+52298714 None:intergenic
AAGAATGAAAATAATTCCAA+GGG 0.598750 5_2:-52297102 Msa0775360:CDS
ACTTCCGAGGTCTTGATCAA+AGG 0.601817 5_2:-52298539 Msa0775360:CDS
GGTTGGAACCATAAGAGTAA+GGG 0.602635 5_2:+52298735 None:intergenic
AGTGGACAAACGAAGAAGAC+AGG 0.603153 5_2:-52298514 Msa0775360:intron
AAAGGAAAGTGTCGCATGAG+AGG 0.604782 5_2:+52296996 None:intergenic
CAAATGAAGAGGCTTTGAAG+TGG 0.621865 5_2:-52298655 Msa0775360:CDS
TCTTTGCTATCTCAGCCCAA+CGG 0.628371 5_2:+52297208 None:intergenic
TTCATGGATAGATTCTTATG+GGG 0.633304 5_2:-52298806 Msa0775360:CDS
ATTGAAATCATGGTAAGAGG+AGG 0.636458 5_2:-52298890 None:intergenic
TGGTGTCTTAGCAAATGAAG+AGG 0.638115 5_2:-52298666 Msa0775360:CDS
CTGTCCTTTGATCAAGACCT+CGG 0.642128 5_2:+52298535 None:intergenic
GCAAGCAGTGTAGAGAGCGA+TGG 0.650454 5_2:-52298230 Msa0775360:CDS
AAAACACCAACATTGTGGGA+AGG 0.651290 5_2:-52298577 Msa0775360:CDS
AATATCCTTAAGGCACAATG+TGG 0.654859 5_2:+52298613 None:intergenic
ACATATTCAACAATTGAGAG+AGG 0.676560 5_2:+52296749 None:intergenic
AGGTCTTGATCAAAGGACAG+TGG 0.688341 5_2:-52298532 Msa0775360:CDS
AACTAAGAAAGAGACTTCCG+AGG 0.693403 5_2:-52298552 Msa0775360:CDS
AGTGTCGCATGAGAGGAAGA+GGG 0.721601 5_2:+52297003 None:intergenic
GGTAAGAGGAGGAAATCATG+GGG 0.754185 5_2:-52298879 Msa0775360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTAACTTTAAAAAAA+AGG - chr5_2:52297202-52297221 Msa0775360:CDS 10.0%
!! ATTATATGAAATCAAAAAAT+GGG + chr5_2:52297467-52297486 None:intergenic 10.0%
!! AATTATATGAAATCAAAAAA+TGG + chr5_2:52297468-52297487 None:intergenic 10.0%
!! TAAAAATGTATGTAATTATT+TGG + chr5_2:52298231-52298250 None:intergenic 10.0%
!!! TAATACTAATTATTTTACTT+GGG - chr5_2:52298310-52298329 Msa0775360:CDS 10.0%
!!! ATTTTGTAACTTTAAAAAAA+AGG - chr5_2:52297202-52297221 Msa0775360:CDS 10.0%
!! ATTATATGAAATCAAAAAAT+GGG + chr5_2:52297467-52297486 None:intergenic 10.0%
!! AATTATATGAAATCAAAAAA+TGG + chr5_2:52297468-52297487 None:intergenic 10.0%
!! TAAAAATGTATGTAATTATT+TGG + chr5_2:52298231-52298250 None:intergenic 10.0%
!!! TAATACTAATTATTTTACTT+GGG - chr5_2:52298310-52298329 Msa0775360:CDS 10.0%
!! GTTAAATTCATATCTTATAT+CGG - chr5_2:52297136-52297155 Msa0775360:CDS 15.0%
!! TTAAATTCATATCTTATATC+GGG - chr5_2:52297137-52297156 Msa0775360:CDS 15.0%
!! TCATAGTTCTTTATAAAAAA+TGG + chr5_2:52297248-52297267 None:intergenic 15.0%
!!! TTATTTGTTATGATGATTAA+AGG - chr5_2:52297299-52297318 Msa0775360:intron 15.0%
!!! ATTTAGATTCATATTTTTCA+AGG - chr5_2:52297654-52297673 Msa0775360:intron 15.0%
!!! ATTTTGTGCTAAATTAATAA+TGG + chr5_2:52297860-52297879 None:intergenic 15.0%
!!! AAAAAGTATCATTTATCAAA+GGG + chr5_2:52297910-52297929 None:intergenic 15.0%
!!! TGAAAATATGTTGTTTATTT+TGG + chr5_2:52298031-52298050 None:intergenic 15.0%
!!! CCTTAAAAATGTTTAAAATT+TGG + chr5_2:52298123-52298142 None:intergenic 15.0%
!!! CCAAATTTTAAACATTTTTA+AGG - chr5_2:52298120-52298139 Msa0775360:intron 15.0%
!!! GTAATACTAATTATTTTACT+TGG - chr5_2:52298309-52298328 Msa0775360:CDS 15.0%
!! GTTAAATTCATATCTTATAT+CGG - chr5_2:52297136-52297155 Msa0775360:CDS 15.0%
!! TTAAATTCATATCTTATATC+GGG - chr5_2:52297137-52297156 Msa0775360:CDS 15.0%
!! TCATAGTTCTTTATAAAAAA+TGG + chr5_2:52297248-52297267 None:intergenic 15.0%
!!! TTATTTGTTATGATGATTAA+AGG - chr5_2:52297299-52297318 Msa0775360:intron 15.0%
!!! ATTTAGATTCATATTTTTCA+AGG - chr5_2:52297654-52297673 Msa0775360:intron 15.0%
!!! ATTTTGTGCTAAATTAATAA+TGG + chr5_2:52297860-52297879 None:intergenic 15.0%
!!! AAAAAGTATCATTTATCAAA+GGG + chr5_2:52297910-52297929 None:intergenic 15.0%
!!! TGAAAATATGTTGTTTATTT+TGG + chr5_2:52298031-52298050 None:intergenic 15.0%
!!! CCTTAAAAATGTTTAAAATT+TGG + chr5_2:52298123-52298142 None:intergenic 15.0%
!!! CCAAATTTTAAACATTTTTA+AGG - chr5_2:52298120-52298139 Msa0775360:intron 15.0%
!!! GTAATACTAATTATTTTACT+TGG - chr5_2:52298309-52298328 Msa0775360:CDS 15.0%
!! CGATTAAAAAAGAATATAAG+AGG + chr5_2:52297171-52297190 None:intergenic 20.0%
!! ATATATCTAACCTTAATATC+AGG + chr5_2:52297439-52297458 None:intergenic 20.0%
!! ATAAATCATCAATCTTGATA+TGG - chr5_2:52297827-52297846 Msa0775360:intron 20.0%
!! TAAATCATCAATCTTGATAT+GGG - chr5_2:52297828-52297847 Msa0775360:intron 20.0%
!!! CAAAAAGTATCATTTATCAA+AGG + chr5_2:52297911-52297930 None:intergenic 20.0%
!! ATGACATATTTCAAATGTTA+AGG + chr5_2:52297964-52297983 None:intergenic 20.0%
!!! TGAAATATGTCATTTTTGAT+TGG - chr5_2:52297971-52297990 Msa0775360:intron 20.0%
!!! ACTTTGAAATATGTTGTTTA+TGG + chr5_2:52298067-52298086 None:intergenic 20.0%
!!! AAATATAAGTATTGCATATG+AGG + chr5_2:52298190-52298209 None:intergenic 20.0%
!! AAAATGCCATAAAAAATCAT+TGG - chr5_2:52298461-52298480 Msa0775360:intron 20.0%
!! AAGAATGAAAATAATTCCAA+GGG - chr5_2:52298526-52298545 Msa0775360:CDS 20.0%
!! CGATTAAAAAAGAATATAAG+AGG + chr5_2:52297171-52297190 None:intergenic 20.0%
!! ATATATCTAACCTTAATATC+AGG + chr5_2:52297439-52297458 None:intergenic 20.0%
!! ATAAATCATCAATCTTGATA+TGG - chr5_2:52297827-52297846 Msa0775360:intron 20.0%
!! TAAATCATCAATCTTGATAT+GGG - chr5_2:52297828-52297847 Msa0775360:intron 20.0%
!!! CAAAAAGTATCATTTATCAA+AGG + chr5_2:52297911-52297930 None:intergenic 20.0%
!! ATGACATATTTCAAATGTTA+AGG + chr5_2:52297964-52297983 None:intergenic 20.0%
!!! TGAAATATGTCATTTTTGAT+TGG - chr5_2:52297971-52297990 Msa0775360:intron 20.0%
!!! ACTTTGAAATATGTTGTTTA+TGG + chr5_2:52298067-52298086 None:intergenic 20.0%
!!! AAATATAAGTATTGCATATG+AGG + chr5_2:52298190-52298209 None:intergenic 20.0%
!! AAAATGCCATAAAAAATCAT+TGG - chr5_2:52298461-52298480 Msa0775360:intron 20.0%
!! AAGAATGAAAATAATTCCAA+GGG - chr5_2:52298526-52298545 Msa0775360:CDS 20.0%
! ATAAGAATCTATCCATGAAA+GGG + chr5_2:52296821-52296840 None:intergenic 25.0%
! TTTCATGGATAGATTCTTAT+GGG - chr5_2:52296821-52296840 Msa0775360:CDS 25.0%
! TTAAAGGAAACTGATAAAGT+TGG - chr5_2:52297315-52297334 Msa0775360:intron 25.0%
!! ATAAAGTTGGTTAAGCAATA+TGG - chr5_2:52297328-52297347 Msa0775360:intron 25.0%
! TGAATCTAAATCTAGATCAT+CGG + chr5_2:52297645-52297664 None:intergenic 25.0%
!! TATTTTCACAGAAAGATAGT+TGG - chr5_2:52298347-52298366 Msa0775360:intron 25.0%
! GAAGAATGAAAATAATTCCA+AGG - chr5_2:52298525-52298544 Msa0775360:CDS 25.0%
!!! GATATAGTTTTCAAGTATGT+AGG + chr5_2:52298566-52298585 None:intergenic 25.0%
!!! GATTTGATTGATTTTCTTCA+TGG + chr5_2:52298660-52298679 None:intergenic 25.0%
! GAAGGTAATTCATTGAAAAA+AGG + chr5_2:52298682-52298701 None:intergenic 25.0%
! TTGTATGAAGTGTAATTCAT+TGG + chr5_2:52298716-52298735 None:intergenic 25.0%
!! CTTCATACAACAAATTTTGA+TGG - chr5_2:52298726-52298745 Msa0775360:CDS 25.0%
! ATAAGAATCTATCCATGAAA+GGG + chr5_2:52296821-52296840 None:intergenic 25.0%
! TTTCATGGATAGATTCTTAT+GGG - chr5_2:52296821-52296840 Msa0775360:CDS 25.0%
! TTAAAGGAAACTGATAAAGT+TGG - chr5_2:52297315-52297334 Msa0775360:intron 25.0%
!! ATAAAGTTGGTTAAGCAATA+TGG - chr5_2:52297328-52297347 Msa0775360:intron 25.0%
! TGAATCTAAATCTAGATCAT+CGG + chr5_2:52297645-52297664 None:intergenic 25.0%
!! TATTTTCACAGAAAGATAGT+TGG - chr5_2:52298347-52298366 Msa0775360:intron 25.0%
! GAAGAATGAAAATAATTCCA+AGG - chr5_2:52298525-52298544 Msa0775360:CDS 25.0%
!!! GATATAGTTTTCAAGTATGT+AGG + chr5_2:52298566-52298585 None:intergenic 25.0%
!!! GATTTGATTGATTTTCTTCA+TGG + chr5_2:52298660-52298679 None:intergenic 25.0%
! GAAGGTAATTCATTGAAAAA+AGG + chr5_2:52298682-52298701 None:intergenic 25.0%
! TTGTATGAAGTGTAATTCAT+TGG + chr5_2:52298716-52298735 None:intergenic 25.0%
!! CTTCATACAACAAATTTTGA+TGG - chr5_2:52298726-52298745 Msa0775360:CDS 25.0%
CATAAGAATCTATCCATGAA+AGG + chr5_2:52296822-52296841 None:intergenic 30.0%
CTTTCATGGATAGATTCTTA+TGG - chr5_2:52296820-52296839 Msa0775360:CDS 30.0%
TTCATGGATAGATTCTTATG+GGG - chr5_2:52296822-52296841 Msa0775360:CDS 30.0%
!!! CATTGTTTTGTTGATGGTTA+GGG + chr5_2:52296863-52296882 None:intergenic 30.0%
!! TACTTGCATTGTTTTGTTGA+TGG + chr5_2:52296869-52296888 None:intergenic 30.0%
AAGCTTGATTCTTGAGTATT+TGG + chr5_2:52296933-52296952 None:intergenic 30.0%
CATAACCTTGAATATCCTTA+AGG + chr5_2:52297028-52297047 None:intergenic 30.0%
CTTAAGGATATTCAAGGTTA+TGG - chr5_2:52297026-52297045 Msa0775360:CDS 30.0%
ATCTAGATCATCGGATAAAT+AGG + chr5_2:52297636-52297655 None:intergenic 30.0%
!! TGTTTGTTATCTGCATACAT+AGG - chr5_2:52297702-52297721 Msa0775360:intron 30.0%
!!! GGCATTCCAATGATTTTTTA+TGG + chr5_2:52298470-52298489 None:intergenic 30.0%
! TGAATTTTGTCTCCTTTTAG+TGG + chr5_2:52298491-52298510 None:intergenic 30.0%
!!! GTTGGTAATTTTTGTAGTGA+TGG + chr5_2:52298602-52298621 None:intergenic 30.0%
! TTGATTTTCTTCATGGCTAA+AGG + chr5_2:52298653-52298672 None:intergenic 30.0%
TCATTGGAAAAAGATTCAGA+AGG + chr5_2:52298700-52298719 None:intergenic 30.0%
AGGAAATTATTCATTGAGGT+AGG + chr5_2:52298844-52298863 None:intergenic 30.0%
AGGAAGGAAATTATTCATTG+AGG + chr5_2:52298848-52298867 None:intergenic 30.0%
ACATATTCAACAATTGAGAG+AGG + chr5_2:52298882-52298901 None:intergenic 30.0%
CATAAGAATCTATCCATGAA+AGG + chr5_2:52296822-52296841 None:intergenic 30.0%
CTTTCATGGATAGATTCTTA+TGG - chr5_2:52296820-52296839 Msa0775360:CDS 30.0%
TTCATGGATAGATTCTTATG+GGG - chr5_2:52296822-52296841 Msa0775360:CDS 30.0%
!!! CATTGTTTTGTTGATGGTTA+GGG + chr5_2:52296863-52296882 None:intergenic 30.0%
!! TACTTGCATTGTTTTGTTGA+TGG + chr5_2:52296869-52296888 None:intergenic 30.0%
AAGCTTGATTCTTGAGTATT+TGG + chr5_2:52296933-52296952 None:intergenic 30.0%
CATAACCTTGAATATCCTTA+AGG + chr5_2:52297028-52297047 None:intergenic 30.0%
CTTAAGGATATTCAAGGTTA+TGG - chr5_2:52297026-52297045 Msa0775360:CDS 30.0%
ATCTAGATCATCGGATAAAT+AGG + chr5_2:52297636-52297655 None:intergenic 30.0%
!! TGTTTGTTATCTGCATACAT+AGG - chr5_2:52297702-52297721 Msa0775360:intron 30.0%
!!! GGCATTCCAATGATTTTTTA+TGG + chr5_2:52298470-52298489 None:intergenic 30.0%
! TGAATTTTGTCTCCTTTTAG+TGG + chr5_2:52298491-52298510 None:intergenic 30.0%
!!! GTTGGTAATTTTTGTAGTGA+TGG + chr5_2:52298602-52298621 None:intergenic 30.0%
! TTGATTTTCTTCATGGCTAA+AGG + chr5_2:52298653-52298672 None:intergenic 30.0%
TCATTGGAAAAAGATTCAGA+AGG + chr5_2:52298700-52298719 None:intergenic 30.0%
AGGAAATTATTCATTGAGGT+AGG + chr5_2:52298844-52298863 None:intergenic 30.0%
AGGAAGGAAATTATTCATTG+AGG + chr5_2:52298848-52298867 None:intergenic 30.0%
ACATATTCAACAATTGAGAG+AGG + chr5_2:52298882-52298901 None:intergenic 30.0%
GTCAATGGCGTTAAAATCTT+TGG - chr5_2:52296771-52296790 Msa0775360:CDS 35.0%
AAATGTCAATGACCCTTTCA+TGG - chr5_2:52296806-52296825 Msa0775360:CDS 35.0%
!!! GCATTGTTTTGTTGATGGTT+AGG + chr5_2:52296864-52296883 None:intergenic 35.0%
AGTATGTTCCCTTACTCTTA+TGG - chr5_2:52296885-52296904 Msa0775360:CDS 35.0%
TATTTGGCCACATAAACTCA+TGG + chr5_2:52296917-52296936 None:intergenic 35.0%
!! GAATCAAGCTTTGTTGTTGA+TGG - chr5_2:52296942-52296961 Msa0775360:CDS 35.0%
AATATCCTTAAGGCACAATG+TGG + chr5_2:52297018-52297037 None:intergenic 35.0%
TTGTGCCTTAAGGATATTCA+AGG - chr5_2:52297020-52297039 Msa0775360:CDS 35.0%
AGCAATATGGCGATAGAAAA+TGG - chr5_2:52297341-52297360 Msa0775360:intron 35.0%
GCAATATGGCGATAGAAAAT+GGG - chr5_2:52297342-52297361 Msa0775360:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr5_2:52297367-52297386 Msa0775360:intron 35.0%
TCATTTGCGTCCTGATATTA+AGG - chr5_2:52297426-52297445 Msa0775360:intron 35.0%
! TGTGCTACTATATCATCCTA+GGG + chr5_2:52297521-52297540 None:intergenic 35.0%
! TTGTGCTACTATATCATCCT+AGG + chr5_2:52297522-52297541 None:intergenic 35.0%
! TTCAAGGATCTGTGTCTTTT+AGG - chr5_2:52297670-52297689 Msa0775360:intron 35.0%
! TCAAGGATCTGTGTCTTTTA+GGG - chr5_2:52297671-52297690 Msa0775360:intron 35.0%
!! AACCTTACAGCTTTAGAACT+TGG - chr5_2:52298157-52298176 Msa0775360:intron 35.0%
ATCATTGGAATGCCACTAAA+AGG - chr5_2:52298476-52298495 Msa0775360:intron 35.0%
! GGTAATTTTTGTAGTGATGG+AGG + chr5_2:52298599-52298618 None:intergenic 35.0%
GCATGTTGTAATTTGGGTAT+TGG + chr5_2:52298810-52298829 None:intergenic 35.0%
CCAAGTGCATGTTGTAATTT+GGG + chr5_2:52298816-52298835 None:intergenic 35.0%
TCCAAGTGCATGTTGTAATT+TGG + chr5_2:52298817-52298836 None:intergenic 35.0%
AGAGGTAAAGATCATAAGGA+AGG + chr5_2:52298864-52298883 None:intergenic 35.0%
TGAGAGAGGTAAAGATCATA+AGG + chr5_2:52298868-52298887 None:intergenic 35.0%
GTCAATGGCGTTAAAATCTT+TGG - chr5_2:52296771-52296790 Msa0775360:CDS 35.0%
AAATGTCAATGACCCTTTCA+TGG - chr5_2:52296806-52296825 Msa0775360:CDS 35.0%
!!! GCATTGTTTTGTTGATGGTT+AGG + chr5_2:52296864-52296883 None:intergenic 35.0%
AGTATGTTCCCTTACTCTTA+TGG - chr5_2:52296885-52296904 Msa0775360:CDS 35.0%
TATTTGGCCACATAAACTCA+TGG + chr5_2:52296917-52296936 None:intergenic 35.0%
!! GAATCAAGCTTTGTTGTTGA+TGG - chr5_2:52296942-52296961 Msa0775360:CDS 35.0%
AATATCCTTAAGGCACAATG+TGG + chr5_2:52297018-52297037 None:intergenic 35.0%
TTGTGCCTTAAGGATATTCA+AGG - chr5_2:52297020-52297039 Msa0775360:CDS 35.0%
AGCAATATGGCGATAGAAAA+TGG - chr5_2:52297341-52297360 Msa0775360:intron 35.0%
GCAATATGGCGATAGAAAAT+GGG - chr5_2:52297342-52297361 Msa0775360:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr5_2:52297367-52297386 Msa0775360:intron 35.0%
TCATTTGCGTCCTGATATTA+AGG - chr5_2:52297426-52297445 Msa0775360:intron 35.0%
! TGTGCTACTATATCATCCTA+GGG + chr5_2:52297521-52297540 None:intergenic 35.0%
! TTGTGCTACTATATCATCCT+AGG + chr5_2:52297522-52297541 None:intergenic 35.0%
! TTCAAGGATCTGTGTCTTTT+AGG - chr5_2:52297670-52297689 Msa0775360:intron 35.0%
! TCAAGGATCTGTGTCTTTTA+GGG - chr5_2:52297671-52297690 Msa0775360:intron 35.0%
!! AACCTTACAGCTTTAGAACT+TGG - chr5_2:52298157-52298176 Msa0775360:intron 35.0%
ATCATTGGAATGCCACTAAA+AGG - chr5_2:52298476-52298495 Msa0775360:intron 35.0%
! GGTAATTTTTGTAGTGATGG+AGG + chr5_2:52298599-52298618 None:intergenic 35.0%
GCATGTTGTAATTTGGGTAT+TGG + chr5_2:52298810-52298829 None:intergenic 35.0%
CCAAGTGCATGTTGTAATTT+GGG + chr5_2:52298816-52298835 None:intergenic 35.0%
TCCAAGTGCATGTTGTAATT+TGG + chr5_2:52298817-52298836 None:intergenic 35.0%
AGAGGTAAAGATCATAAGGA+AGG + chr5_2:52298864-52298883 None:intergenic 35.0%
TGAGAGAGGTAAAGATCATA+AGG + chr5_2:52298868-52298887 None:intergenic 35.0%
ATGGTAAGAGGAGGAAATCA+TGG - chr5_2:52296747-52296766 Msa0775360:CDS 40.0%
TGGTAAGAGGAGGAAATCAT+GGG - chr5_2:52296748-52296767 Msa0775360:CDS 40.0%
GGTTGGAACCATAAGAGTAA+GGG + chr5_2:52296896-52296915 None:intergenic 40.0%
TGGTTGGAACCATAAGAGTA+AGG + chr5_2:52296897-52296916 None:intergenic 40.0%
GTTCCAACCATGAGTTTATG+TGG - chr5_2:52296907-52296926 Msa0775360:CDS 40.0%
TGGTGTCTTAGCAAATGAAG+AGG - chr5_2:52296962-52296981 Msa0775360:CDS 40.0%
!! CAAATGAAGAGGCTTTGAAG+TGG - chr5_2:52296973-52296992 Msa0775360:CDS 40.0%
TAAGGCACAATGTGGAAGTT+TGG + chr5_2:52297010-52297029 None:intergenic 40.0%
AACTTCCACATTGTGCCTTA+AGG - chr5_2:52297010-52297029 Msa0775360:CDS 40.0%
TGGTGAAAACACCAACATTG+TGG - chr5_2:52297046-52297065 Msa0775360:CDS 40.0%
GGTGAAAACACCAACATTGT+GGG - chr5_2:52297047-52297066 Msa0775360:CDS 40.0%
AAAACACCAACATTGTGGGA+AGG - chr5_2:52297051-52297070 Msa0775360:CDS 40.0%
AGTTATCCTTCCCACAATGT+TGG + chr5_2:52297060-52297079 None:intergenic 40.0%
AACTAAGAAAGAGACTTCCG+AGG - chr5_2:52297076-52297095 Msa0775360:CDS 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr5_2:52297371-52297390 Msa0775360:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr5_2:52297372-52297391 Msa0775360:intron 40.0%
TTGTGCTTGAATTTGACCCT+AGG - chr5_2:52297502-52297521 Msa0775360:intron 40.0%
!! TGCCAAGTTCTAAAGCTGTA+AGG + chr5_2:52298162-52298181 None:intergenic 40.0%
GTAGCTACACATGCCAAAAT+TGG - chr5_2:52298394-52298413 Msa0775360:intron 40.0%
ATGCCAAAATTGGAAACCGT+TGG - chr5_2:52298404-52298423 Msa0775360:intron 40.0%
TGCCAAAATTGGAAACCGTT+GGG - chr5_2:52298405-52298424 Msa0775360:intron 40.0%
GAGATAGCAAAGAAGATTCC+AGG - chr5_2:52298430-52298449 Msa0775360:intron 40.0%
! ATGGCATTTTCAGTTCTTCC+TGG + chr5_2:52298451-52298470 None:intergenic 40.0%
!!! GGACTTTAGTTTTGATCCCT+TGG + chr5_2:52298545-52298564 None:intergenic 40.0%
!! TTTTGTAGTGATGGAGGTGT+TGG + chr5_2:52298593-52298612 None:intergenic 40.0%
CCCAAATTACAACATGCACT+TGG - chr5_2:52298813-52298832 Msa0775360:CDS 40.0%
ATGGTAAGAGGAGGAAATCA+TGG - chr5_2:52296747-52296766 Msa0775360:CDS 40.0%
TGGTAAGAGGAGGAAATCAT+GGG - chr5_2:52296748-52296767 Msa0775360:CDS 40.0%
GGTTGGAACCATAAGAGTAA+GGG + chr5_2:52296896-52296915 None:intergenic 40.0%
TGGTTGGAACCATAAGAGTA+AGG + chr5_2:52296897-52296916 None:intergenic 40.0%
GTTCCAACCATGAGTTTATG+TGG - chr5_2:52296907-52296926 Msa0775360:CDS 40.0%
TGGTGTCTTAGCAAATGAAG+AGG - chr5_2:52296962-52296981 Msa0775360:CDS 40.0%
!! CAAATGAAGAGGCTTTGAAG+TGG - chr5_2:52296973-52296992 Msa0775360:CDS 40.0%
TAAGGCACAATGTGGAAGTT+TGG + chr5_2:52297010-52297029 None:intergenic 40.0%
AACTTCCACATTGTGCCTTA+AGG - chr5_2:52297010-52297029 Msa0775360:CDS 40.0%
TGGTGAAAACACCAACATTG+TGG - chr5_2:52297046-52297065 Msa0775360:CDS 40.0%
GGTGAAAACACCAACATTGT+GGG - chr5_2:52297047-52297066 Msa0775360:CDS 40.0%
AAAACACCAACATTGTGGGA+AGG - chr5_2:52297051-52297070 Msa0775360:CDS 40.0%
AGTTATCCTTCCCACAATGT+TGG + chr5_2:52297060-52297079 None:intergenic 40.0%
AACTAAGAAAGAGACTTCCG+AGG - chr5_2:52297076-52297095 Msa0775360:CDS 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr5_2:52297371-52297390 Msa0775360:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr5_2:52297372-52297391 Msa0775360:intron 40.0%
TTGTGCTTGAATTTGACCCT+AGG - chr5_2:52297502-52297521 Msa0775360:intron 40.0%
!! TGCCAAGTTCTAAAGCTGTA+AGG + chr5_2:52298162-52298181 None:intergenic 40.0%
GTAGCTACACATGCCAAAAT+TGG - chr5_2:52298394-52298413 Msa0775360:intron 40.0%
ATGCCAAAATTGGAAACCGT+TGG - chr5_2:52298404-52298423 Msa0775360:intron 40.0%
TGCCAAAATTGGAAACCGTT+GGG - chr5_2:52298405-52298424 Msa0775360:intron 40.0%
GAGATAGCAAAGAAGATTCC+AGG - chr5_2:52298430-52298449 Msa0775360:intron 40.0%
! ATGGCATTTTCAGTTCTTCC+TGG + chr5_2:52298451-52298470 None:intergenic 40.0%
!!! GGACTTTAGTTTTGATCCCT+TGG + chr5_2:52298545-52298564 None:intergenic 40.0%
!! TTTTGTAGTGATGGAGGTGT+TGG + chr5_2:52298593-52298612 None:intergenic 40.0%
CCCAAATTACAACATGCACT+TGG - chr5_2:52298813-52298832 Msa0775360:CDS 40.0%
GGTAAGAGGAGGAAATCATG+GGG - chr5_2:52296749-52296768 Msa0775360:CDS 45.0%
TGGCCACATAAACTCATGGT+TGG + chr5_2:52296913-52296932 None:intergenic 45.0%
ACTTCCGAGGTCTTGATCAA+AGG - chr5_2:52297089-52297108 Msa0775360:CDS 45.0%
CTGTCCTTTGATCAAGACCT+CGG + chr5_2:52297096-52297115 None:intergenic 45.0%
AGGTCTTGATCAAAGGACAG+TGG - chr5_2:52297096-52297115 Msa0775360:CDS 45.0%
AGTGGACAAACGAAGAAGAC+AGG - chr5_2:52297114-52297133 Msa0775360:CDS 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr5_2:52297376-52297395 Msa0775360:intron 45.0%
! AGCCCAACGGTTTCCAATTT+TGG + chr5_2:52298410-52298429 None:intergenic 45.0%
! TCTTTGCTATCTCAGCCCAA+CGG + chr5_2:52298423-52298442 None:intergenic 45.0%
! ATGAGAGGAAGAGGGTATGT+TGG + chr5_2:52298620-52298639 None:intergenic 45.0%
!! AAAGGAAAGTGTCGCATGAG+AGG + chr5_2:52298635-52298654 None:intergenic 45.0%
GGTAAGAGGAGGAAATCATG+GGG - chr5_2:52296749-52296768 Msa0775360:CDS 45.0%
TGGCCACATAAACTCATGGT+TGG + chr5_2:52296913-52296932 None:intergenic 45.0%
ACTTCCGAGGTCTTGATCAA+AGG - chr5_2:52297089-52297108 Msa0775360:CDS 45.0%
CTGTCCTTTGATCAAGACCT+CGG + chr5_2:52297096-52297115 None:intergenic 45.0%
AGGTCTTGATCAAAGGACAG+TGG - chr5_2:52297096-52297115 Msa0775360:CDS 45.0%
AGTGGACAAACGAAGAAGAC+AGG - chr5_2:52297114-52297133 Msa0775360:CDS 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr5_2:52297376-52297395 Msa0775360:intron 45.0%
! AGCCCAACGGTTTCCAATTT+TGG + chr5_2:52298410-52298429 None:intergenic 45.0%
! TCTTTGCTATCTCAGCCCAA+CGG + chr5_2:52298423-52298442 None:intergenic 45.0%
! ATGAGAGGAAGAGGGTATGT+TGG + chr5_2:52298620-52298639 None:intergenic 45.0%
!! AAAGGAAAGTGTCGCATGAG+AGG + chr5_2:52298635-52298654 None:intergenic 45.0%
GGAGGAAATCATGGGGTCAA+TGG - chr5_2:52296756-52296775 Msa0775360:CDS 50.0%
AGTGTCGCATGAGAGGAAGA+GGG + chr5_2:52298628-52298647 None:intergenic 50.0%
! AAGTGTCGCATGAGAGGAAG+AGG + chr5_2:52298629-52298648 None:intergenic 50.0%
GGAGGAAATCATGGGGTCAA+TGG - chr5_2:52296756-52296775 Msa0775360:CDS 50.0%
AGTGTCGCATGAGAGGAAGA+GGG + chr5_2:52298628-52298647 None:intergenic 50.0%
! AAGTGTCGCATGAGAGGAAG+AGG + chr5_2:52298629-52298648 None:intergenic 50.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr5_2:52297398-52297417 Msa0775360:intron 55.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr5_2:52297398-52297417 Msa0775360:intron 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 52296747 52298903 52296747 ID=Msa0775360;Name=Msa0775360
chr5_2 mRNA 52296747 52298903 52296747 ID=Msa0775360-mRNA-1;Parent=Msa0775360;Name=Msa0775360-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|353
chr5_2 exon 52298515 52298903 52298515 ID=Msa0775360-mRNA-1:exon:15622;Parent=Msa0775360-mRNA-1
chr5_2 exon 52298203 52298329 52298203 ID=Msa0775360-mRNA-1:exon:15621;Parent=Msa0775360-mRNA-1
chr5_2 exon 52296747 52297292 52296747 ID=Msa0775360-mRNA-1:exon:15620;Parent=Msa0775360-mRNA-1
chr5_2 CDS 52298515 52298903 52298515 ID=Msa0775360-mRNA-1:cds;Parent=Msa0775360-mRNA-1
chr5_2 CDS 52298203 52298329 52298203 ID=Msa0775360-mRNA-1:cds;Parent=Msa0775360-mRNA-1
chr5_2 CDS 52296747 52297292 52296747 ID=Msa0775360-mRNA-1:cds;Parent=Msa0775360-mRNA-1
Gene Sequence

>Msa0775360

ATGGTAAGAGGAGGAAATCATGGGGTCAATGGCGTTAAAATCTTTGGCAATGAAAATATAAATGTCAATGACCCTTTCATGGATAGATTCTTATGGGGTCAAATGATTCACTACCCTAACCATCAACAAAACAATGCAAGTATGTTCCCTTACTCTTATGGTTCCAACCATGAGTTTATGTGGCCAAATACTCAAGAATCAAGCTTTGTTGTTGATGGTGTCTTAGCAAATGAAGAGGCTTTGAAGTGGACTAACTTCAACCAAACTTCCACATTGTGCCTTAAGGATATTCAAGGTTATGGTGAAAACACCAACATTGTGGGAAGGATAACTAAGAAAGAGACTTCCGAGGTCTTGATCAAAGGACAGTGGACAAACGAAGAAGACAGGAAACTGATAAAGTTGGTTAAGCAATATGGCGATAGAAAATGGGCTCAAATAGCTGAGAAGTTAGAAGGAAGGGTTGGCAAGCAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCCAAAATTGGAAACCGTTGGGCTGAGATAGCAAAGAAGATTCCAGGAAGAACTGAAAATGCCATAAAAAATCATTGGAATGCCACTAAAAGGAGACAAAATTCAAGAAGAAAGAACAAGAAGAATGAAAATAATTCCAAGGGATCAAAACTAAAGTCCTACATACTTGAAAACTATATCAAAACCAACACCTCCATCACTACAAAAATTACCAACATACCCTCTTCCTCTCATGCGACACTTTCCTTTAGCCATGAAGAAAATCAATCAAATCCTTTTTTCAATGAATTACCTTCTGAATCTTTTTCCAATGAATTACACTTCATACAACAAATTTTGATGGATGATAATAATCAAAATGTTGTTGATGATGTGAATGAGAGTGAGCTTGTTCATTCAATCCAATACCCAAATTACAACATGCACTTGGATACTCCTACCTCAATGAATAATTTCCTTCCTTATGATCTTTACCTCTCTCAATTGTTGAATATGTAG
Protein sequence

>Msa0775360

MVRGGNHGVNGVKIFGNENINVNDPFMDRFLWGQMIHYPNHQQNNASMFPYSYGSNHEFMWPNTQESSFVVDGVLANEEALKWTNFNQTSTLCLKDIQGYGENTNIVGRITKKETSEVLIKGQWTNEEDRKLIKLVKQYGDRKWAQIAEKLEGRVGKQCRERWHNHLRPDIKKDSWSEEEEKILVATHAKIGNRWAEIAKKIPGRTENAIKNHWNATKRRQNSRRKNKKNENNSKGSKLKSYILENYIKTNTSITTKITNIPSSSHATLSFSHEENQSNPFFNELPSESFSNELHFIQQILMDDNNQNVVDDVNESELVHSIQYPNYNMHLDTPTSMNNFLPYDLYLSQLLNM*