Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0775810 | sp|F4IXE7|IDM1_ARATH | 36.384 | 448 | 274 | 7 | 614 | 1054 | 575 | 1018 | 4.86e-82 | 295 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0775810 | G7JZJ8 | 93.007 | 1144 | 38 | 3 | 1 | 1102 | 1 | 1144 | 0.0 | 2177 |
Gene ID | Type | Classification |
---|---|---|
Msa0775810 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0775810 | MtrunA17_Chr5g0430361 | 94.656 | 1048 | 31 | 2 | 32 | 1054 | 5 | 1052 | 0.0 | 2045 |
Msa0775810 | MtrunA17_Chr3g0105291 | 46.257 | 1122 | 487 | 22 | 21 | 1098 | 11 | 1060 | 0.0 | 939 |
Msa0775810 | MtrunA17_Chr5g0407211 | 42.824 | 432 | 207 | 10 | 657 | 1059 | 3 | 423 | 2.06e-110 | 350 |
Msa0775810 | MtrunA17_Chr5g0407251 | 42.553 | 423 | 207 | 9 | 657 | 1054 | 3 | 414 | 5.70e-109 | 347 |
Msa0775810 | MtrunA17_Chr7g0270101 | 43.826 | 413 | 213 | 8 | 656 | 1058 | 383 | 786 | 3.62e-108 | 357 |
Msa0775810 | MtrunA17_Chr3g0134821 | 39.744 | 468 | 244 | 10 | 615 | 1058 | 378 | 831 | 9.60e-100 | 335 |
Msa0775810 | MtrunA17_Chr3g0134811 | 35.642 | 491 | 243 | 9 | 626 | 1054 | 307 | 786 | 8.38e-97 | 325 |
Msa0775810 | MtrunA17_Chr4g0012501 | 54.941 | 253 | 103 | 5 | 6 | 253 | 3 | 249 | 2.22e-84 | 274 |
Msa0775810 | MtrunA17_Chr2g0316251 | 35.845 | 491 | 289 | 12 | 576 | 1054 | 685 | 1161 | 1.67e-81 | 291 |
Msa0775810 | MtrunA17_Chr1g0205451 | 34.476 | 496 | 291 | 10 | 568 | 1054 | 537 | 1007 | 2.62e-74 | 270 |
Msa0775810 | MtrunA17_Chr1g0185491 | 34.249 | 473 | 268 | 12 | 598 | 1049 | 760 | 1210 | 4.61e-74 | 270 |
Msa0775810 | MtrunA17_Chr3g0134851 | 37.076 | 383 | 164 | 8 | 697 | 1054 | 129 | 459 | 1.24e-58 | 209 |
Msa0775810 | MtrunA17_Chr7g0259981 | 33.651 | 315 | 179 | 8 | 751 | 1061 | 6 | 294 | 4.32e-54 | 191 |
Msa0775810 | MtrunA17_Chr1g0182481 | 29.648 | 398 | 213 | 9 | 694 | 1042 | 496 | 875 | 3.34e-46 | 180 |
Msa0775810 | MtrunA17_Chr7g0265211 | 28.700 | 446 | 227 | 10 | 680 | 1054 | 517 | 942 | 1.70e-45 | 178 |
Msa0775810 | MtrunA17_Chr1g0179841 | 28.571 | 448 | 213 | 13 | 686 | 1054 | 378 | 797 | 2.63e-42 | 167 |
Msa0775810 | MtrunA17_Chr4g0055731 | 26.406 | 409 | 237 | 16 | 655 | 1053 | 109 | 463 | 4.13e-31 | 129 |
Msa0775810 | MtrunA17_Chr4g0028111 | 24.235 | 392 | 213 | 8 | 707 | 1032 | 187 | 560 | 2.03e-28 | 122 |
Msa0775810 | MtrunA17_Chr4g0027811 | 23.741 | 417 | 208 | 11 | 690 | 1054 | 216 | 574 | 3.15e-27 | 118 |
Msa0775810 | MtrunA17_Chr2g0320451 | 31.858 | 226 | 135 | 6 | 841 | 1058 | 808 | 1022 | 3.25e-22 | 103 |
Msa0775810 | MtrunA17_Chr2g0320451 | 26.872 | 227 | 106 | 4 | 694 | 871 | 500 | 715 | 4.15e-19 | 93.6 |
Msa0775810 | MtrunA17_Chr4g0025251 | 25.591 | 254 | 161 | 6 | 823 | 1054 | 449 | 696 | 1.04e-19 | 95.1 |
Msa0775810 | MtrunA17_Chr3g0101951 | 34.028 | 144 | 88 | 5 | 26 | 167 | 395 | 533 | 7.51e-12 | 69.7 |
Msa0775810 | MtrunA17_Chr3g0139561 | 26.396 | 197 | 131 | 6 | 842 | 1030 | 165 | 355 | 3.23e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0775810 | AT5G58610.3 | 38.202 | 1068 | 557 | 29 | 12 | 1054 | 14 | 1003 | 0.0 | 657 |
Msa0775810 | AT5G58610.8 | 38.202 | 1068 | 557 | 29 | 12 | 1054 | 14 | 1003 | 0.0 | 657 |
Msa0775810 | AT5G58610.2 | 38.202 | 1068 | 557 | 29 | 12 | 1054 | 14 | 1003 | 0.0 | 657 |
Msa0775810 | AT5G58610.5 | 38.163 | 1056 | 550 | 29 | 24 | 1054 | 17 | 994 | 0.0 | 645 |
Msa0775810 | AT5G58610.7 | 38.163 | 1056 | 550 | 29 | 24 | 1054 | 17 | 994 | 0.0 | 644 |
Msa0775810 | AT5G58610.1 | 37.417 | 1053 | 536 | 30 | 24 | 1054 | 17 | 968 | 0.0 | 615 |
Msa0775810 | AT5G58610.6 | 37.417 | 1053 | 536 | 30 | 24 | 1054 | 17 | 968 | 0.0 | 615 |
Msa0775810 | AT5G58610.10 | 37.023 | 1021 | 540 | 29 | 12 | 1007 | 14 | 956 | 0.0 | 595 |
Msa0775810 | AT5G58610.9 | 36.967 | 1009 | 533 | 29 | 24 | 1007 | 17 | 947 | 0.0 | 583 |
Msa0775810 | AT5G58610.11 | 36.148 | 971 | 517 | 29 | 24 | 969 | 17 | 909 | 4.01e-173 | 532 |
Msa0775810 | AT5G58610.4 | 39.791 | 671 | 350 | 16 | 397 | 1054 | 143 | 772 | 2.74e-141 | 447 |
Msa0775810 | AT1G05380.3 | 38.795 | 415 | 243 | 7 | 651 | 1058 | 514 | 924 | 4.51e-84 | 297 |
Msa0775810 | AT1G05380.1 | 38.795 | 415 | 243 | 7 | 651 | 1058 | 514 | 924 | 4.51e-84 | 297 |
Msa0775810 | AT1G05380.2 | 38.795 | 415 | 243 | 7 | 651 | 1058 | 514 | 924 | 4.51e-84 | 297 |
Msa0775810 | AT3G14980.3 | 36.384 | 448 | 274 | 7 | 614 | 1054 | 575 | 1018 | 1.51e-83 | 294 |
Msa0775810 | AT3G14980.5 | 36.384 | 448 | 274 | 7 | 614 | 1054 | 530 | 973 | 2.61e-83 | 295 |
Msa0775810 | AT3G14980.6 | 36.384 | 448 | 274 | 7 | 614 | 1054 | 575 | 1018 | 4.95e-83 | 295 |
Msa0775810 | AT3G14980.1 | 36.384 | 448 | 274 | 7 | 614 | 1054 | 575 | 1018 | 4.95e-83 | 295 |
Msa0775810 | AT3G14980.2 | 36.384 | 448 | 274 | 7 | 614 | 1054 | 575 | 1018 | 4.95e-83 | 295 |
Msa0775810 | AT5G36740.5 | 35.385 | 455 | 265 | 10 | 611 | 1056 | 512 | 946 | 6.16e-82 | 291 |
Msa0775810 | AT5G36740.1 | 35.385 | 455 | 265 | 10 | 611 | 1056 | 512 | 946 | 6.16e-82 | 291 |
Msa0775810 | AT5G36740.4 | 34.409 | 465 | 266 | 11 | 611 | 1056 | 359 | 803 | 1.34e-78 | 280 |
Msa0775810 | AT4G14920.3 | 35.821 | 402 | 249 | 7 | 655 | 1051 | 578 | 975 | 1.75e-71 | 260 |
Msa0775810 | AT4G14920.2 | 35.821 | 402 | 249 | 7 | 655 | 1051 | 578 | 975 | 1.76e-71 | 260 |
Msa0775810 | AT4G14920.1 | 35.821 | 402 | 249 | 7 | 655 | 1051 | 578 | 975 | 1.76e-71 | 260 |
Msa0775810 | AT5G36670.4 | 32.484 | 471 | 271 | 12 | 611 | 1056 | 512 | 960 | 1.39e-69 | 254 |
Msa0775810 | AT5G36670.5 | 32.484 | 471 | 271 | 12 | 611 | 1056 | 512 | 960 | 1.39e-69 | 254 |
Msa0775810 | AT5G63900.1 | 45.270 | 296 | 144 | 9 | 762 | 1054 | 255 | 535 | 4.08e-69 | 242 |
Msa0775810 | AT5G36670.2 | 35.000 | 400 | 231 | 10 | 611 | 1001 | 512 | 891 | 4.15e-68 | 247 |
Msa0775810 | AT5G36740.2 | 35.000 | 400 | 231 | 10 | 611 | 1001 | 512 | 891 | 4.15e-68 | 247 |
Msa0775810 | AT5G36740.3 | 35.000 | 400 | 231 | 10 | 611 | 1001 | 512 | 891 | 4.15e-68 | 247 |
Msa0775810 | AT5G36670.3 | 31.601 | 481 | 272 | 13 | 611 | 1056 | 359 | 817 | 3.90e-66 | 243 |
Msa0775810 | AT5G36670.1 | 31.601 | 481 | 272 | 13 | 611 | 1056 | 512 | 970 | 9.96e-66 | 243 |
Msa0775810 | AT3G14980.4 | 34.341 | 364 | 228 | 7 | 614 | 970 | 575 | 934 | 6.37e-58 | 217 |
Msa0775810 | AT2G27980.1 | 25.709 | 564 | 324 | 14 | 563 | 1054 | 512 | 1052 | 2.05e-44 | 176 |
Msa0775810 | AT2G37520.1 | 27.854 | 438 | 238 | 10 | 686 | 1063 | 402 | 821 | 2.83e-44 | 174 |
Msa0775810 | AT3G53680.1 | 28.266 | 421 | 237 | 9 | 686 | 1054 | 419 | 826 | 6.58e-43 | 169 |
Msa0775810 | AT3G53680.2 | 28.266 | 421 | 237 | 9 | 686 | 1054 | 421 | 828 | 7.08e-43 | 169 |
Msa0775810 | AT2G36720.1 | 26.728 | 434 | 231 | 10 | 694 | 1058 | 557 | 972 | 7.56e-42 | 167 |
Msa0775810 | AT2G36720.2 | 26.728 | 434 | 231 | 10 | 694 | 1058 | 557 | 972 | 7.56e-42 | 167 |
Find 244 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGCTTTCCTAATAGATTT+TGG | 0.135803 | 5_2:-52973842 | None:intergenic |
TCATAAGAATTGTCTTAATT+TGG | 0.158903 | 5_2:+52972902 | Msa0775810:CDS |
CGTTGAAACCTTGGCTCATT+TGG | 0.168863 | 5_2:-52971966 | None:intergenic |
TAAATTGTTTGGAAGGTTTA+AGG | 0.204622 | 5_2:-52971293 | None:intergenic |
TTCCAAAGGCTTCCAAATTA+TGG | 0.219352 | 5_2:-52971635 | None:intergenic |
CAAAAGGGTGCAGAAGGTTT+TGG | 0.232594 | 5_2:+52972467 | Msa0775810:CDS |
TTCATTTCATCACCTAAATC+TGG | 0.258138 | 5_2:-52970989 | None:intergenic |
TTGAAGTCCTTGTGCGTTTA+CGG | 0.261009 | 5_2:-52972386 | None:intergenic |
GACCTTGTTGTTGAGGTAAT+TGG | 0.281049 | 5_2:+52971232 | Msa0775810:CDS |
GGTTCAACTTGAAATTTAAC+TGG | 0.282801 | 5_2:-52972015 | None:intergenic |
AGAAAACATCTTGTTTATCT+TGG | 0.286222 | 5_2:+52971751 | Msa0775810:CDS |
GGATAACTCGCGAAGGAATT+AGG | 0.287893 | 5_2:+52972613 | Msa0775810:CDS |
AGCATATTCTTCCCAGATTT+AGG | 0.288962 | 5_2:+52970977 | Msa0775810:CDS |
GTTGAAACCTTGGCTCATTT+GGG | 0.293407 | 5_2:-52971965 | None:intergenic |
GACGTTCTAAGTCCATAATT+TGG | 0.302733 | 5_2:+52971623 | Msa0775810:CDS |
ACGGGGCTCCAAAATCTATT+AGG | 0.304902 | 5_2:+52973834 | Msa0775810:CDS |
GGTGGATGTTTCTAATGTTT+TGG | 0.305903 | 5_2:+52970772 | Msa0775810:CDS |
TCCAATTGAGTTACGGATAA+AGG | 0.306009 | 5_2:+52970862 | Msa0775810:CDS |
AAGTTACCATCTTGTTGTTT+TGG | 0.312082 | 5_2:-52975796 | None:intergenic |
GTCCATAATTTGGAAGCCTT+TGG | 0.322129 | 5_2:+52971633 | Msa0775810:CDS |
GCTTGATCCACTTCAGATAC+TGG | 0.326871 | 5_2:-52975856 | None:intergenic |
TTTGTCCATCATGCCGTTGC+GGG | 0.334836 | 5_2:+52973089 | Msa0775810:CDS |
ATTACAAGTCCATTCTCTAA+TGG | 0.340868 | 5_2:-52971191 | None:intergenic |
CTAGTCTTGCCTGCTGTTCC+CGG | 0.346824 | 5_2:+52975398 | Msa0775810:CDS |
GTGATAATGGAAATCGAAAA+AGG | 0.351320 | 5_2:+52970024 | Msa0775810:CDS |
TCCTTTATCCGTAACTCAAT+TGG | 0.356636 | 5_2:-52970863 | None:intergenic |
CGGATAAAGGATCTTCCATT+TGG | 0.359722 | 5_2:+52970875 | Msa0775810:CDS |
GACACATGGACGAATTCTTT+TGG | 0.363350 | 5_2:+52975428 | Msa0775810:CDS |
CGCCGACTCCTCAAACTTGT+TGG | 0.370823 | 5_2:+52971423 | Msa0775810:CDS |
TCATCAGAAGCTAAAGCAAC+TGG | 0.372787 | 5_2:+52975364 | Msa0775810:intron |
AACAGATTTGGTATGATATA+AGG | 0.374438 | 5_2:+52971146 | Msa0775810:CDS |
CCATCTATAGTACGTAATTC+AGG | 0.376584 | 5_2:-52972339 | None:intergenic |
ACCTGTTGTCAGAATCTATA+TGG | 0.390234 | 5_2:+52972639 | Msa0775810:CDS |
GAATGATGGATCTACAAGTT+TGG | 0.392714 | 5_2:+52975899 | Msa0775810:CDS |
GATGGTGATAAGAGTGATAA+TGG | 0.395193 | 5_2:+52970011 | Msa0775810:CDS |
ATTGGTTACCAAGAGGGAAA+TGG | 0.396210 | 5_2:+52971065 | Msa0775810:CDS |
ATGCCAAGAGGACAAAATTC+TGG | 0.396912 | 5_2:-52972036 | None:intergenic |
AACTTTGGATTAAGTTTATC+CGG | 0.400564 | 5_2:-52971835 | None:intergenic |
CGTAGGAGAGTTTCCTCCTT+CGG | 0.403737 | 5_2:-52972580 | None:intergenic |
AAAATCGAAGTGTAAAACTT+TGG | 0.406804 | 5_2:-52971850 | None:intergenic |
CAGTAAAAGACCTTGTACTT+TGG | 0.409730 | 5_2:-52972552 | None:intergenic |
ATGTAGGAGCAAGACGGTTC+GGG | 0.411437 | 5_2:+52971708 | Msa0775810:CDS |
AAGTCGTCTGTACTGAAATC+TGG | 0.412571 | 5_2:-52975148 | None:intergenic |
GCTAATCAAGGCGATGCATT+TGG | 0.413138 | 5_2:+52971364 | Msa0775810:CDS |
ATGATCAGAATTGGTCCATT+CGG | 0.414801 | 5_2:-52972265 | None:intergenic |
TATGATACGCCGAGGGGCAT+TGG | 0.416757 | 5_2:-52972884 | None:intergenic |
CAGCACAAGCATCATTCCTT+TGG | 0.417068 | 5_2:+52971465 | Msa0775810:CDS |
CGGTTTCTCTTTGCAGTTGG+TGG | 0.417342 | 5_2:-52972366 | None:intergenic |
GGGATGAATCAACTGAGAAT+TGG | 0.419006 | 5_2:+52971047 | Msa0775810:CDS |
AACATCTTGTTTATCTTGGA+TGG | 0.419268 | 5_2:+52971755 | Msa0775810:CDS |
TATTCTTTCCTAGACTTTCA+AGG | 0.420955 | 5_2:+52975494 | Msa0775810:CDS |
GCTCAATCGACTAAACTTCC+AGG | 0.421981 | 5_2:+52974921 | Msa0775810:CDS |
TGCTAGAGAAAGGGTTATGC+AGG | 0.423833 | 5_2:-52974007 | None:intergenic |
GGTGGTCCAGAGTTCATGTT+AGG | 0.423892 | 5_2:-52971901 | None:intergenic |
TCTCCCTCGAGTAAATTGTT+TGG | 0.424533 | 5_2:-52971304 | None:intergenic |
ATCACCACCATGATCAGAAT+TGG | 0.425092 | 5_2:-52972274 | None:intergenic |
GATGTAGGAGCAAGACGGTT+CGG | 0.425946 | 5_2:+52971707 | Msa0775810:CDS |
CCTGAATTACGTACTATAGA+TGG | 0.427897 | 5_2:+52972339 | Msa0775810:CDS |
ATCAGTAACCAACAAGTTTG+AGG | 0.429317 | 5_2:-52971431 | None:intergenic |
CAGTCTCGGTGAAACAGATT+TGG | 0.429902 | 5_2:+52971134 | Msa0775810:CDS |
TGATCAGAATTGGTCCATTC+GGG | 0.429936 | 5_2:-52972264 | None:intergenic |
TTGGTTACCAAGAGGGAAAT+GGG | 0.430226 | 5_2:+52971066 | Msa0775810:CDS |
AGGGCATCCCTGATGGTGAT+TGG | 0.430704 | 5_2:+52973065 | Msa0775810:intron |
ATCTTGGATGGACAATTGAA+TGG | 0.433717 | 5_2:+52971767 | Msa0775810:CDS |
CGAGACGATATATGAAAGAT+TGG | 0.435446 | 5_2:+52973355 | Msa0775810:CDS |
ATTTGTTCTGTTTGTAACTA+CGG | 0.435651 | 5_2:+52972840 | Msa0775810:CDS |
GAGGCGGTAACGGTCTAATC+AGG | 0.443329 | 5_2:-52970841 | None:intergenic |
AACTCAATTGGAGGCGGTAA+CGG | 0.443516 | 5_2:-52970851 | None:intergenic |
ATGTGTTGATGTGAAATATC+AGG | 0.443715 | 5_2:+52970901 | Msa0775810:CDS |
TTTAACTGGAGAAGGTTCAT+TGG | 0.444310 | 5_2:-52972001 | None:intergenic |
GGAAACTCTCCTACGTTTGA+AGG | 0.447090 | 5_2:+52972588 | Msa0775810:CDS |
ACATCAACACATTGTCCAAA+TGG | 0.448928 | 5_2:-52970890 | None:intergenic |
CATCATTCCTTTGGTGGATG+AGG | 0.450939 | 5_2:+52971474 | Msa0775810:CDS |
TCTCCACAAGATCAGTGTTT+AGG | 0.452938 | 5_2:+52972198 | Msa0775810:CDS |
CGATCGCTGCGATGGAATGA+AGG | 0.459419 | 5_2:+52970949 | Msa0775810:CDS |
GAAGCTAAAGCAACTGGGAG+TGG | 0.459529 | 5_2:+52975370 | Msa0775810:intron |
AGCCTCAAAATATTCTGTCT+TGG | 0.464847 | 5_2:+52972505 | Msa0775810:CDS |
CAGTTGAGGAGTTTGGAAGA+TGG | 0.465345 | 5_2:+52970638 | Msa0775810:intron |
TCCATATAGATTCTGACAAC+AGG | 0.467354 | 5_2:-52972640 | None:intergenic |
CAAACTGAGTGTTGCACTCT+CGG | 0.468934 | 5_2:+52973962 | Msa0775810:CDS |
CCGCACAATGATCTGTTTGA+AGG | 0.470390 | 5_2:+52972804 | Msa0775810:CDS |
GGACAAAACCAATCACCATC+AGG | 0.470956 | 5_2:-52973073 | None:intergenic |
TAAGAGAAAGTGGAAATTGA+AGG | 0.472614 | 5_2:+52972101 | Msa0775810:CDS |
TTACGGTTTCTCTTTGCAGT+TGG | 0.473232 | 5_2:-52972369 | None:intergenic |
TCATGCCGTTGCGGGATTTG+CGG | 0.473499 | 5_2:+52973097 | Msa0775810:CDS |
TTTCTGGGATCATGGCATCC+AGG | 0.474048 | 5_2:+52970662 | Msa0775810:CDS |
GTAGTCTTCCTTCTTTCAGT+TGG | 0.476165 | 5_2:-52972165 | None:intergenic |
ACGATATCTCTGCTAGAGAA+AGG | 0.477387 | 5_2:-52974017 | None:intergenic |
TCTTCATCTGCTTTAGATTG+TGG | 0.478088 | 5_2:+52970806 | Msa0775810:CDS |
GGGTGCTAAGATCAAGCAAA+AGG | 0.478848 | 5_2:+52972451 | Msa0775810:CDS |
GCATACTCATCAATAACTTC+AGG | 0.482703 | 5_2:-52971679 | None:intergenic |
CACAAGCATCATTCCTTTGG+TGG | 0.482854 | 5_2:+52971468 | Msa0775810:CDS |
TTGCTGAAACCATTAGAGAA+TGG | 0.483151 | 5_2:+52971182 | Msa0775810:CDS |
TTTCACCGAGACTGCAACAT+AGG | 0.485786 | 5_2:-52971125 | None:intergenic |
GTGATATTCGATCGCTGCGA+TGG | 0.486249 | 5_2:+52970941 | Msa0775810:CDS |
ACTGGAGAAGGTTCATTGGT+TGG | 0.487564 | 5_2:-52971997 | None:intergenic |
GAGGACAAACGTTGAAACCT+TGG | 0.487775 | 5_2:-52971975 | None:intergenic |
AACTGAGGATCACTCAGGAT+TGG | 0.488881 | 5_2:+52971026 | Msa0775810:CDS |
CAATCATCAATGGAGGTTGA+TGG | 0.488960 | 5_2:+52969993 | None:intergenic |
ACTTGAAATTTAACTGGAGA+AGG | 0.489209 | 5_2:-52972009 | None:intergenic |
TTAGGTGATGAAATGAAGGT+TGG | 0.489849 | 5_2:+52970995 | Msa0775810:CDS |
TAGTCTTCCTTCTTTCAGTT+GGG | 0.489926 | 5_2:-52972164 | None:intergenic |
TTCAAAGGCTAGCACACAAA+AGG | 0.490434 | 5_2:+52972404 | Msa0775810:CDS |
CATTGTGACGCTGCTAATCA+AGG | 0.490750 | 5_2:+52971352 | Msa0775810:CDS |
GATTAGCAAAAGAGGAATGA+TGG | 0.492433 | 5_2:+52975885 | Msa0775810:CDS |
CATTGTGTTGCCAAAGTACA+AGG | 0.495043 | 5_2:+52972542 | Msa0775810:CDS |
ACTGAGGATCACTCAGGATT+GGG | 0.495646 | 5_2:+52971027 | Msa0775810:CDS |
CCTCGAGTAAATTGTTTGGA+AGG | 0.499084 | 5_2:-52971300 | None:intergenic |
CAGTGTTTAGGCACACTTCA+AGG | 0.501569 | 5_2:+52972210 | Msa0775810:CDS |
AAACCTTGGCTCATTTGGGG+TGG | 0.502467 | 5_2:-52971961 | None:intergenic |
CCAAAATCTATTAGGAAAGC+CGG | 0.502943 | 5_2:+52973842 | Msa0775810:CDS |
CGGTGCTGAAAGTGACTTAG+TGG | 0.503086 | 5_2:+52973926 | Msa0775810:CDS |
GGTATCCTATGTTGCAGTCT+CGG | 0.503297 | 5_2:+52971120 | Msa0775810:CDS |
TACCGCCTCCAATTGAGTTA+CGG | 0.506527 | 5_2:+52970855 | Msa0775810:CDS |
AGATTTAGGTGATGAAATGA+AGG | 0.508571 | 5_2:+52970991 | Msa0775810:CDS |
CAAATCCCGCAACGGCATGA+TGG | 0.512668 | 5_2:-52973094 | None:intergenic |
GTATGATATAAGGATGAGAA+AGG | 0.514448 | 5_2:+52971156 | Msa0775810:CDS |
AGCGGCTTTGCAAACCATGC+TGG | 0.514471 | 5_2:+52972666 | Msa0775810:CDS |
TTTATCCGTAACTCAATTGG+AGG | 0.515632 | 5_2:-52970860 | None:intergenic |
TAAGAATTGTCTTAATTTGG+AGG | 0.523841 | 5_2:+52972905 | Msa0775810:CDS |
GCAGAAGGGATTAGCAAAAG+AGG | 0.524390 | 5_2:+52975877 | Msa0775810:CDS |
TCATTTCATCACCTAAATCT+GGG | 0.526675 | 5_2:-52970988 | None:intergenic |
TTCTGGGATCATGGCATCCA+GGG | 0.527252 | 5_2:+52970663 | Msa0775810:CDS |
TTTAATGGATGAGCTCGAAA+AGG | 0.528962 | 5_2:+52975185 | Msa0775810:CDS |
GAATGGACCAATTCTGATCA+TGG | 0.531149 | 5_2:+52972267 | Msa0775810:CDS |
TCTAGCACACCGGGAACAGC+AGG | 0.531932 | 5_2:-52975407 | None:intergenic |
AAGCAGTAACTGCAGACCTT+CGG | 0.532897 | 5_2:+52972692 | Msa0775810:CDS |
CGATATCTCTGCTAGAGAAA+GGG | 0.534298 | 5_2:-52974016 | None:intergenic |
ATCAAGCAAAAGGGTGCAGA+AGG | 0.536140 | 5_2:+52972461 | Msa0775810:CDS |
GAAAGATTGCTGTCAATTTG+AGG | 0.537617 | 5_2:-52971922 | None:intergenic |
CTGTGGAGAAGAGTGTGAAC+GGG | 0.542047 | 5_2:+52973380 | Msa0775810:CDS |
AACATCTGTTAGCAGAAGGA+TGG | 0.542192 | 5_2:+52972130 | Msa0775810:CDS |
AACCAACAAGTTTGAGGAGT+CGG | 0.543763 | 5_2:-52971425 | None:intergenic |
AGATTTCAGTACAGACGACT+TGG | 0.545529 | 5_2:+52975150 | Msa0775810:CDS |
TATCAGGATGCTTGGTGGGA+AGG | 0.546580 | 5_2:+52970917 | Msa0775810:CDS |
ATCAGATTATCTTATTGAAG+TGG | 0.547552 | 5_2:+52970751 | Msa0775810:CDS |
GGACAATCTAACTTGGACAT+TGG | 0.549998 | 5_2:+52973878 | Msa0775810:CDS |
CTGAGAATTGGTTACCAAGA+GGG | 0.550005 | 5_2:+52971059 | Msa0775810:CDS |
TTGTTTGGAAGGTTTAAGGC+GGG | 0.550395 | 5_2:-52971289 | None:intergenic |
GTTTATCCGGAGACTTGTAC+CGG | 0.551483 | 5_2:-52971822 | None:intergenic |
TGACAGTTCCTTGAAAGTCT+AGG | 0.552331 | 5_2:-52975502 | None:intergenic |
ACTCGGCTGATAAGAGAAAG+TGG | 0.552574 | 5_2:+52972091 | Msa0775810:CDS |
AAGACGTTATATTCAACCAA+AGG | 0.553521 | 5_2:+52974042 | Msa0775810:CDS |
AGTTACTGCTTCCACCAGCA+TGG | 0.554079 | 5_2:-52972680 | None:intergenic |
ACGATACCGGTACAAGTCTC+CGG | 0.556383 | 5_2:+52971816 | Msa0775810:CDS |
AATCTGATTCTTCATCATCA+AGG | 0.558197 | 5_2:-52970736 | None:intergenic |
GTCCATGTGTCTAGCACACC+GGG | 0.558868 | 5_2:-52975416 | None:intergenic |
TTCCCGGTGTGCTAGACACA+TGG | 0.559676 | 5_2:+52975414 | Msa0775810:CDS |
GGAAAATTATCCGCTGTGGA+AGG | 0.561737 | 5_2:+52970684 | Msa0775810:CDS |
ATCCGTAACTCAATTGGAGG+CGG | 0.563021 | 5_2:-52970857 | None:intergenic |
CATGTGTAGGGCATCCCTGA+TGG | 0.563743 | 5_2:+52973058 | Msa0775810:intron |
GGTGGATGAGGACTTTGAGA+AGG | 0.565737 | 5_2:+52971486 | Msa0775810:CDS |
GTGCCTAAACACTGATCTTG+TGG | 0.566474 | 5_2:-52972201 | None:intergenic |
CTCAATCGACTAAACTTCCA+GGG | 0.567209 | 5_2:+52974922 | Msa0775810:CDS |
TCAACTTCAGACAGTTCCAA+AGG | 0.567236 | 5_2:-52971649 | None:intergenic |
TTGACTACCCAACTGAAAGA+AGG | 0.567692 | 5_2:+52972157 | Msa0775810:CDS |
AGATTATCTTATTGAAGTGG+TGG | 0.568142 | 5_2:+52970754 | Msa0775810:CDS |
GCTGCGATGGAATGAAGGAT+AGG | 0.569938 | 5_2:+52970954 | Msa0775810:CDS |
TCACAATGAACATTATCAGT+TGG | 0.571207 | 5_2:-52971337 | None:intergenic |
GGCTAGTCCAGTATCTGAAG+TGG | 0.575225 | 5_2:+52975849 | Msa0775810:CDS |
CGTCCATGTGTCTAGCACAC+CGG | 0.577703 | 5_2:-52975417 | None:intergenic |
GAAACTCTCCTACGTTTGAA+GGG | 0.580720 | 5_2:+52972589 | Msa0775810:CDS |
GGTGCTAAGATCAAGCAAAA+GGG | 0.582852 | 5_2:+52972452 | Msa0775810:CDS |
GAAGTACAGTATAGAAACCC+TGG | 0.584288 | 5_2:-52974939 | None:intergenic |
CATCAGAAGCTAAAGCAACT+GGG | 0.584545 | 5_2:+52975365 | Msa0775810:intron |
GGAGAAGGTTCATTGGTTGG+AGG | 0.585791 | 5_2:-52971994 | None:intergenic |
GAGGATCCTAACATGAACTC+TGG | 0.588083 | 5_2:+52971895 | Msa0775810:CDS |
GTGGAGAGACCTTGTTGTTG+AGG | 0.588535 | 5_2:+52971225 | Msa0775810:CDS |
GCTGTTTGAGGAGTGTGAGA+GGG | 0.589438 | 5_2:+52971099 | Msa0775810:CDS |
AGTAAGAAAGTGTCCATCCT+CGG | 0.590389 | 5_2:-52973140 | None:intergenic |
ATGTGAAATATCAGGATGCT+TGG | 0.590726 | 5_2:+52970909 | Msa0775810:CDS |
TTGAAACCTTGGCTCATTTG+GGG | 0.593251 | 5_2:-52971964 | None:intergenic |
GTTATTGATGAGTATGCACT+TGG | 0.594005 | 5_2:+52971685 | Msa0775810:CDS |
AGAATGGACTTGTAATGTGA+AGG | 0.594117 | 5_2:+52971198 | Msa0775810:CDS |
GAAATATCAGGATGCTTGGT+GGG | 0.594887 | 5_2:+52970913 | Msa0775810:CDS |
CTTCCAAACAATTTACTCGA+GGG | 0.595130 | 5_2:+52971301 | Msa0775810:CDS |
GGCGAACTTCGCTTAATGTG+AGG | 0.596695 | 5_2:-52971267 | None:intergenic |
TTTATGCGACCAATGCCCCT+CGG | 0.597093 | 5_2:+52972875 | Msa0775810:CDS |
GCGAACTTCGCTTAATGTGA+GGG | 0.597250 | 5_2:-52971266 | None:intergenic |
AAATGAAGAATTGATTAGTG+TGG | 0.598410 | 5_2:+52974969 | Msa0775810:CDS |
CTCCTCCACATAGACGATAC+CGG | 0.598432 | 5_2:+52971803 | Msa0775810:CDS |
AAAATTGAAGAGACCGAGGA+TGG | 0.598542 | 5_2:+52973127 | Msa0775810:CDS |
ATGAGTATGCACTTGGATGT+AGG | 0.598658 | 5_2:+52971692 | Msa0775810:CDS |
TGAAATATCAGGATGCTTGG+TGG | 0.599189 | 5_2:+52970912 | Msa0775810:CDS |
GGGAAGTAATGCAAGATCAC+AGG | 0.600203 | 5_2:+52972760 | Msa0775810:CDS |
TCTGAAGTGGATCAAGCAGA+AGG | 0.601234 | 5_2:+52975862 | Msa0775810:CDS |
CCTTCCAAACAATTTACTCG+AGG | 0.608045 | 5_2:+52971300 | Msa0775810:CDS |
TCACAGGACAAGAGAAATCA+CGG | 0.613557 | 5_2:+52972776 | Msa0775810:CDS |
TTGTACCGGTATCGTCTATG+TGG | 0.615054 | 5_2:-52971808 | None:intergenic |
TCAAAGTCCTCATCCACCAA+AGG | 0.616747 | 5_2:-52971481 | None:intergenic |
TAAACGCACAAGGACTTCAA+AGG | 0.618492 | 5_2:+52972389 | Msa0775810:CDS |
TACCGGTATCGTCTATGTGG+AGG | 0.619310 | 5_2:-52971805 | None:intergenic |
TTTGGCCGCAAATCCCGCAA+CGG | 0.620748 | 5_2:-52973102 | None:intergenic |
GGTCACTGTTAGATTGCATG+AGG | 0.622465 | 5_2:+52972739 | Msa0775810:CDS |
CACCAATTACCTCAACAACA+AGG | 0.625256 | 5_2:-52971234 | None:intergenic |
GCTAGAGAAAGGGTTATGCA+GGG | 0.625919 | 5_2:-52974006 | None:intergenic |
CTGAAGTGGATCAAGCAGAA+GGG | 0.627799 | 5_2:+52975863 | Msa0775810:CDS |
TAGTATTTCACGATGCCAAG+AGG | 0.628876 | 5_2:-52972048 | None:intergenic |
TGCAATATCTGATAAGCCTG+AGG | 0.631201 | 5_2:+52971396 | Msa0775810:CDS |
GGCTTTGCAAACCATGCTGG+TGG | 0.632141 | 5_2:+52972669 | Msa0775810:CDS |
CTTGTAATGTGAAGGAGTTG+TGG | 0.634145 | 5_2:+52971206 | Msa0775810:CDS |
CAATTCTTATGATACGCCGA+GGG | 0.635929 | 5_2:-52972891 | None:intergenic |
TGTTTGGAAGGTTTAAGGCG+GGG | 0.636113 | 5_2:-52971288 | None:intergenic |
AGCTGTTTGAGGAGTGTGAG+AGG | 0.637236 | 5_2:+52971098 | Msa0775810:CDS |
TATATGAAAGATTGGCTCTG+TGG | 0.638494 | 5_2:+52973363 | Msa0775810:CDS |
CTGAAATCTGGTACCTACGA+GGG | 0.639712 | 5_2:-52975136 | None:intergenic |
GCGACTCCAAAACAACAAGA+TGG | 0.640491 | 5_2:+52975790 | Msa0775810:CDS |
CCAGGGAAAATTATCCGCTG+TGG | 0.641302 | 5_2:+52970680 | Msa0775810:CDS |
ACTCTCCTACGTTTGAAGGG+AGG | 0.642713 | 5_2:+52972592 | Msa0775810:CDS |
AGAGAAACCGTAAACGCACA+AGG | 0.642907 | 5_2:+52972379 | Msa0775810:CDS |
GTTATCCTCCCTTCAAACGT+AGG | 0.643744 | 5_2:-52972597 | None:intergenic |
ATAGCAGAAGTGCCCCTCGT+AGG | 0.645166 | 5_2:+52975123 | Msa0775810:CDS |
CCTTCAAACAGATCATTGTG+CGG | 0.646292 | 5_2:-52972804 | None:intergenic |
GATCCACCCCAAATGAGCCA+AGG | 0.648744 | 5_2:+52971958 | Msa0775810:CDS |
GACAAAACCAATCACCATCA+GGG | 0.650816 | 5_2:-52973072 | None:intergenic |
GGTGGATGTGGAATTTGAGA+AGG | 0.651302 | 5_2:+52971552 | Msa0775810:CDS |
TTAAAGAAAAGATTCCCGAA+TGG | 0.651679 | 5_2:+52972250 | Msa0775810:CDS |
TGCTGAAAGTGACTTAGTGG+CGG | 0.651844 | 5_2:+52973929 | Msa0775810:CDS |
ATTGTTTGGAAGGTTTAAGG+CGG | 0.652953 | 5_2:-52971290 | None:intergenic |
CTAGAGAAAGGGTTATGCAG+GGG | 0.662729 | 5_2:-52974005 | None:intergenic |
TAAACAACTGAGGATCACTC+AGG | 0.664286 | 5_2:+52971021 | Msa0775810:CDS |
AAATAAAATTGAAGAGACCG+AGG | 0.667269 | 5_2:+52973123 | Msa0775810:CDS |
ACAATTCTTATGATACGCCG+AGG | 0.669642 | 5_2:-52972892 | None:intergenic |
TGAAATCTGGTACCTACGAG+GGG | 0.676014 | 5_2:-52975135 | None:intergenic |
TGTTCTGTTTGTAACTACGG+TGG | 0.676365 | 5_2:+52972843 | Msa0775810:CDS |
ACTGAGAATTGGTTACCAAG+AGG | 0.676963 | 5_2:+52971058 | Msa0775810:CDS |
TCTGTGGAGAAGAGTGTGAA+CGG | 0.679351 | 5_2:+52973379 | Msa0775810:CDS |
TTAGATTGTGGCTATCAGCG+AGG | 0.682175 | 5_2:+52970818 | Msa0775810:CDS |
ACTTGGATGTAGGAGCAAGA+CGG | 0.682568 | 5_2:+52971702 | Msa0775810:CDS |
TAGAGAGTGAAGTACTTACG+CGG | 0.686594 | 5_2:+52972430 | Msa0775810:CDS |
GAAGGGAGGATAACTCGCGA+AGG | 0.688944 | 5_2:+52972606 | Msa0775810:CDS |
GTCACTGTTAGATTGCATGA+GGG | 0.696628 | 5_2:+52972740 | Msa0775810:CDS |
CAGAATCTATATGGACTCAG+CGG | 0.703933 | 5_2:+52972648 | Msa0775810:CDS |
AGATTGCTGTCAATTTGAGG+TGG | 0.705765 | 5_2:-52971919 | None:intergenic |
TGATTAGTGTGGCGACTGTG+AGG | 0.707183 | 5_2:+52974980 | Msa0775810:CDS |
TCACTCATTAGAGAGAAACT+CGG | 0.709740 | 5_2:+52972074 | Msa0775810:CDS |
TTGGTTACTGATCAAAACTG+TGG | 0.709900 | 5_2:+52971442 | Msa0775810:CDS |
TATGTCAACTCTGAGACTTG+CGG | 0.721346 | 5_2:+52973906 | Msa0775810:CDS |
AGAGAGTGAAGTACTTACGC+GGG | 0.723801 | 5_2:+52972431 | Msa0775810:CDS |
AGGTTGGAGTTAAACAACTG+AGG | 0.726333 | 5_2:+52971011 | Msa0775810:CDS |
AATTCTTATGATACGCCGAG+GGG | 0.728497 | 5_2:-52972890 | None:intergenic |
ACTGAAATCTGGTACCTACG+AGG | 0.735704 | 5_2:-52975137 | None:intergenic |
AACGCGTCTTCCTTCCACAG+CGG | 0.788427 | 5_2:-52970694 | None:intergenic |
TGGACCAATTCTGATCATGG+TGG | 0.790764 | 5_2:+52972270 | Msa0775810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAGATTTGATTTTTATT+TGG | + | chr5_2:52970133-52970152 | Msa0775810:intron | 10.0% |
!! | AAAAACAATTGTTAAAAAAA+TGG | - | chr5_2:52970519-52970538 | None:intergenic | 10.0% |
!! | TATATTAAATTATCTTGATA+CGG | + | chr5_2:52975256-52975275 | Msa0775810:intron | 10.0% |
!!! | ATGTAAAATTAATTTTGAAA+AGG | + | chr5_2:52975828-52975847 | Msa0775810:CDS | 10.0% |
!! | TTATAAAAAATTCTTTCAAG+TGG | - | chr5_2:52970596-52970615 | None:intergenic | 15.0% |
!! | TTAATATGTTATGATTGAAA+AGG | - | chr5_2:52972949-52972968 | None:intergenic | 15.0% |
!!! | ATGAAAATATTTCTAAAAAG+GGG | - | chr5_2:52973425-52973444 | None:intergenic | 15.0% |
!!! | GATGAAAATATTTCTAAAAA+GGG | - | chr5_2:52973426-52973445 | None:intergenic | 15.0% |
!!! | AGATGAAAATATTTCTAAAA+AGG | - | chr5_2:52973427-52973446 | None:intergenic | 15.0% |
!!! | TTTTGATAAAGGAATAAAAA+TGG | - | chr5_2:52973520-52973539 | None:intergenic | 15.0% |
!! | AAATGATAAACATAAATTGA+AGG | - | chr5_2:52974082-52974101 | None:intergenic | 15.0% |
!! | ATCTTCAAATAAATATGTTA+CGG | - | chr5_2:52974421-52974440 | None:intergenic | 15.0% |
!!! | ATTTCATTTTTTAGGATATT+TGG | + | chr5_2:52975093-52975112 | Msa0775810:intron | 15.0% |
!! | TTTATTTGGTTATGAATTTC+TGG | + | chr5_2:52970147-52970166 | Msa0775810:intron | 20.0% |
!! | TTATTTGGTTATGAATTTCT+GGG | + | chr5_2:52970148-52970167 | Msa0775810:intron | 20.0% |
!! | TATGAAAACAAAAATCATAC+AGG | - | chr5_2:52970354-52970373 | None:intergenic | 20.0% |
!! | AATAAGATAGATACTGTTTA+TGG | + | chr5_2:52970449-52970468 | Msa0775810:intron | 20.0% |
!! | TGAATCAGATAAAAATCAAA+TGG | + | chr5_2:52971531-52971550 | Msa0775810:CDS | 20.0% |
!! | AATCAGATAAAAATCGAAAA+CGG | + | chr5_2:52971599-52971618 | Msa0775810:CDS | 20.0% |
!! | TCATAAGAATTGTCTTAATT+TGG | + | chr5_2:52972902-52972921 | Msa0775810:CDS | 20.0% |
!!! | TCATTGGTCAAATTTTTTAT+TGG | - | chr5_2:52973273-52973292 | None:intergenic | 20.0% |
!!! | TGAAAATATTTCTAAAAAGG+GGG | - | chr5_2:52973424-52973443 | None:intergenic | 20.0% |
!!! | AGAATTATGTTTTATGACAA+TGG | + | chr5_2:52973769-52973788 | Msa0775810:intron | 20.0% |
!!! | TTGAGTATTTATTACGATTT+TGG | + | chr5_2:52974576-52974595 | Msa0775810:intron | 20.0% |
!! | ATATCCATTAGAATCATATT+TGG | - | chr5_2:52974611-52974630 | None:intergenic | 20.0% |
!! | ATTGAAAAAAAATCTAAGCA+CGG | - | chr5_2:52974656-52974675 | None:intergenic | 20.0% |
!!! | TTTTTTTCAATCAAACAAGA+TGG | + | chr5_2:52974665-52974684 | Msa0775810:intron | 20.0% |
!! | AACAAATACAATCATAACTA+AGG | - | chr5_2:52974746-52974765 | None:intergenic | 20.0% |
!!! | GAGAAATTTGATAATAAACT+TGG | - | chr5_2:52975327-52975346 | None:intergenic | 20.0% |
!! | TCTTTAATTATGTGCATATT+TGG | - | chr5_2:52975723-52975742 | None:intergenic | 20.0% |
!! | TTTTGTGATTTGATGTTCTT+AGG | + | chr5_2:52970190-52970209 | Msa0775810:intron | 25.0% |
! | TTTGTGATTTGATGTTCTTA+GGG | + | chr5_2:52970191-52970210 | Msa0775810:intron | 25.0% |
! | CAGAATTACAAGAAAATCAA+AGG | - | chr5_2:52970294-52970313 | None:intergenic | 25.0% |
!!! | GTAATTCTGTTGTTGATTTA+TGG | + | chr5_2:52970305-52970324 | Msa0775810:intron | 25.0% |
!!! | AAATGGAAAAGTGTTGATAA+AGG | - | chr5_2:52970502-52970521 | None:intergenic | 25.0% |
!!! | TTTTTTCAACTTTTCAGTTG+AGG | + | chr5_2:52970624-52970643 | Msa0775810:intron | 25.0% |
! | ATCAGATTATCTTATTGAAG+TGG | + | chr5_2:52970751-52970770 | Msa0775810:CDS | 25.0% |
!! | AACAGATTTGGTATGATATA+AGG | + | chr5_2:52971146-52971165 | Msa0775810:CDS | 25.0% |
! | TAAATTGTTTGGAAGGTTTA+AGG | - | chr5_2:52971296-52971315 | None:intergenic | 25.0% |
! | ATCAGATAAAAATCAAATGG+TGG | + | chr5_2:52971534-52971553 | Msa0775810:CDS | 25.0% |
!! | AGAAAACATCTTGTTTATCT+TGG | + | chr5_2:52971751-52971770 | Msa0775810:CDS | 25.0% |
! | AACTTTGGATTAAGTTTATC+CGG | - | chr5_2:52971838-52971857 | None:intergenic | 25.0% |
! | AAAATCGAAGTGTAAAACTT+TGG | - | chr5_2:52971853-52971872 | None:intergenic | 25.0% |
!! | AGTTACTAAAATTTTGCAAG+AGG | + | chr5_2:52971876-52971895 | Msa0775810:CDS | 25.0% |
! | ATTTGTTCTGTTTGTAACTA+CGG | + | chr5_2:52972840-52972859 | Msa0775810:CDS | 25.0% |
!! | TAAGAATTGTCTTAATTTGG+AGG | + | chr5_2:52972905-52972924 | Msa0775810:CDS | 25.0% |
! | ATGCAGAATGAAACTTAATA+TGG | - | chr5_2:52973041-52973060 | None:intergenic | 25.0% |
!! | TAGTTGAAGACATTTTTCAT+TGG | - | chr5_2:52973289-52973308 | None:intergenic | 25.0% |
!! | AAAATATTTCTAAAAAGGGG+GGG | - | chr5_2:52973422-52973441 | None:intergenic | 25.0% |
!! | GAAAATATTTCTAAAAAGGG+GGG | - | chr5_2:52973423-52973442 | None:intergenic | 25.0% |
!! | AAAGTATCAAGTGTTTGAAT+TGG | - | chr5_2:52973558-52973577 | None:intergenic | 25.0% |
! | CAGTGTATATTTAAGTCATA+AGG | - | chr5_2:52973747-52973766 | None:intergenic | 25.0% |
!!! | GTTTTTCTTGATGATAAAGT+TGG | - | chr5_2:52974276-52974295 | None:intergenic | 25.0% |
! | GCATAGATATGTTAGAATTT+AGG | + | chr5_2:52974319-52974338 | Msa0775810:intron | 25.0% |
! | TTTGTTGCATATATAGTGTT+AGG | + | chr5_2:52974347-52974366 | Msa0775810:intron | 25.0% |
! | TTGTTGCATATATAGTGTTA+GGG | + | chr5_2:52974348-52974367 | Msa0775810:intron | 25.0% |
! | GAAATGCGTACATAAAAATA+AGG | - | chr5_2:52974460-52974479 | None:intergenic | 25.0% |
!! | ATAGATTTTGCACAATAAGT+TGG | - | chr5_2:52974490-52974509 | None:intergenic | 25.0% |
! | TGATCCAAATATGATTCTAA+TGG | + | chr5_2:52974604-52974623 | Msa0775810:intron | 25.0% |
! | TGTGAATATAACAATAATGC+AGG | - | chr5_2:52974855-52974874 | None:intergenic | 25.0% |
! | AAATGAAGAATTGATTAGTG+TGG | + | chr5_2:52974969-52974988 | Msa0775810:CDS | 25.0% |
! | AAAAATGAAATGCCAAGTTA+TGG | - | chr5_2:52975084-52975103 | None:intergenic | 25.0% |
!!! | AACTTGGCATTTCATTTTTT+AGG | + | chr5_2:52975085-52975104 | Msa0775810:intron | 25.0% |
!!! | TCAAAGTTTGTCATTTTATC+TGG | + | chr5_2:52975219-52975238 | Msa0775810:intron | 25.0% |
! | GTCTGCAATATGAAAAAATA+AGG | - | chr5_2:52975770-52975789 | None:intergenic | 25.0% |
!! | GTGATAATGGAAATCGAAAA+AGG | + | chr5_2:52970024-52970043 | Msa0775810:CDS | 30.0% |
GAAATCGAAAAAGGAAAAGA+GGG | + | chr5_2:52970033-52970052 | Msa0775810:CDS | 30.0% | |
TCTTGTCAATGAAAAAGTTG+AGG | + | chr5_2:52970073-52970092 | Msa0775810:CDS | 30.0% | |
!!! | TGGGTTGTTGATTTTGTATT+TGG | + | chr5_2:52970167-52970186 | Msa0775810:intron | 30.0% |
!! | TTGTTGATTTATGGTTTCGA+TGG | + | chr5_2:52970314-52970333 | Msa0775810:intron | 30.0% |
!!! | TTTCTTGTTTTACGCTGTTT+TGG | + | chr5_2:52970402-52970421 | Msa0775810:intron | 30.0% |
ATTTCATGCAAGTGATGAAT+TGG | + | chr5_2:52970425-52970444 | Msa0775810:intron | 30.0% | |
TTTCATGCAAGTGATGAATT+GGG | + | chr5_2:52970426-52970445 | Msa0775810:intron | 30.0% | |
! | AGATACTGTTTATGGTAATG+TGG | + | chr5_2:52970457-52970476 | Msa0775810:intron | 30.0% |
AATCTGATTCTTCATCATCA+AGG | - | chr5_2:52970739-52970758 | None:intergenic | 30.0% | |
AGATTATCTTATTGAAGTGG+TGG | + | chr5_2:52970754-52970773 | Msa0775810:CDS | 30.0% | |
!! | GATGTTTCTAATGTTTTGGA+TGG | + | chr5_2:52970776-52970795 | Msa0775810:CDS | 30.0% |
! | ATGTGTTGATGTGAAATATC+AGG | + | chr5_2:52970901-52970920 | Msa0775810:CDS | 30.0% |
TCATTTCATCACCTAAATCT+GGG | - | chr5_2:52970991-52971010 | None:intergenic | 30.0% | |
TTCATTTCATCACCTAAATC+TGG | - | chr5_2:52970992-52971011 | None:intergenic | 30.0% | |
AGATTTAGGTGATGAAATGA+AGG | + | chr5_2:52970991-52971010 | Msa0775810:CDS | 30.0% | |
GTATGATATAAGGATGAGAA+AGG | + | chr5_2:52971156-52971175 | Msa0775810:CDS | 30.0% | |
ATTACAAGTCCATTCTCTAA+TGG | - | chr5_2:52971194-52971213 | None:intergenic | 30.0% | |
TCACAATGAACATTATCAGT+TGG | - | chr5_2:52971340-52971359 | None:intergenic | 30.0% | |
!! | TAAAAATCAAATGGTGGATG+TGG | + | chr5_2:52971540-52971559 | Msa0775810:CDS | 30.0% |
! | AACATCTTGTTTATCTTGGA+TGG | + | chr5_2:52971755-52971774 | Msa0775810:CDS | 30.0% |
ACTTGAAATTTAACTGGAGA+AGG | - | chr5_2:52972012-52972031 | None:intergenic | 30.0% | |
GGTTCAACTTGAAATTTAAC+TGG | - | chr5_2:52972018-52972037 | None:intergenic | 30.0% | |
TAAGAGAAAGTGGAAATTGA+AGG | + | chr5_2:52972101-52972120 | Msa0775810:CDS | 30.0% | |
AAAAAACATCTGTTAGCAGA+AGG | + | chr5_2:52972126-52972145 | Msa0775810:CDS | 30.0% | |
! | ATTCGGGAATCTTTTCTTTA+AGG | - | chr5_2:52972251-52972270 | None:intergenic | 30.0% |
TTAAAGAAAAGATTCCCGAA+TGG | + | chr5_2:52972250-52972269 | Msa0775810:CDS | 30.0% | |
! | AACCAAGACAGAATATTTTG+AGG | - | chr5_2:52972510-52972529 | None:intergenic | 30.0% |
! | AAAGTACAAGGTCTTTTACT+GGG | + | chr5_2:52972554-52972573 | Msa0775810:CDS | 30.0% |
TTCAAAAATATACAAGCCGA+AGG | - | chr5_2:52972711-52972730 | None:intergenic | 30.0% | |
!! | TTCGGCTTGTATATTTTTGA+AGG | + | chr5_2:52972710-52972729 | Msa0775810:CDS | 30.0% |
!! | GCTTGTATATTTTTGAAGGA+TGG | + | chr5_2:52972714-52972733 | Msa0775810:CDS | 30.0% |
!! | GTATATTTTTGAAGGATGGT+AGG | + | chr5_2:52972718-52972737 | Msa0775810:CDS | 30.0% |
TACATGGAAACAAAAAGGAA+AGG | - | chr5_2:52972994-52973013 | None:intergenic | 30.0% | |
!! | CGGTCTCTTCAATTTTATTT+TGG | - | chr5_2:52973123-52973142 | None:intergenic | 30.0% |
AAATAAAATTGAAGAGACCG+AGG | + | chr5_2:52973123-52973142 | Msa0775810:CDS | 30.0% | |
! | CATCTTTTTCTTCATTTCTG+AGG | - | chr5_2:52973332-52973351 | None:intergenic | 30.0% |
! | AAATATTTCTAAAAAGGGGG+GGG | - | chr5_2:52973421-52973440 | None:intergenic | 30.0% |
! | TCTCATTTTGCATGAAGAAT+TGG | + | chr5_2:52973444-52973463 | Msa0775810:intron | 30.0% |
! | TATTCTGATTTGACATTCGT+TGG | + | chr5_2:52973481-52973500 | Msa0775810:intron | 30.0% |
ATCATGGTTGCATCTATTAA+TGG | + | chr5_2:52973606-52973625 | Msa0775810:intron | 30.0% | |
!!! | AATGCATGATTTTTGGTGAT+TGG | + | chr5_2:52973660-52973679 | Msa0775810:intron | 30.0% |
! | ACAGATTTAAGTTTGATGCT+AGG | + | chr5_2:52973708-52973727 | Msa0775810:intron | 30.0% |
! | CAGATTTAAGTTTGATGCTA+GGG | + | chr5_2:52973709-52973728 | Msa0775810:intron | 30.0% |
TGATGCTAGGGAAATATTTA+AGG | + | chr5_2:52973721-52973740 | Msa0775810:intron | 30.0% | |
AAGACGTTATATTCAACCAA+AGG | + | chr5_2:52974042-52974061 | Msa0775810:CDS | 30.0% | |
TTTATGTTTATCATGCAGGA+TGG | + | chr5_2:52974384-52974403 | Msa0775810:intron | 30.0% | |
! | GAGGAGTAAACAAAGTATTT+CGG | + | chr5_2:52974547-52974566 | Msa0775810:intron | 30.0% |
AAAAAAAATCTAAGCACGGA+AGG | - | chr5_2:52974652-52974671 | None:intergenic | 30.0% | |
! | CAATCATAACTAAGGTTTTG+AGG | - | chr5_2:52974738-52974757 | None:intergenic | 30.0% |
TTAACAAATCCATCAGTGAA+TGG | - | chr5_2:52974787-52974806 | None:intergenic | 30.0% | |
!! | CATTTCAAGTTTCCATAACT+TGG | + | chr5_2:52975069-52975088 | Msa0775810:intron | 30.0% |
AATTACAATTCAAATGCCAC+AGG | - | chr5_2:52975282-52975301 | None:intergenic | 30.0% | |
TATTCTTTCCTAGACTTTCA+AGG | + | chr5_2:52975494-52975513 | Msa0775810:CDS | 30.0% | |
TCCTATATTAGCTGTTAGTT+TGG | + | chr5_2:52975598-52975617 | Msa0775810:intron | 30.0% | |
TATGTGCATATTTGGATTGT+CGG | - | chr5_2:52975715-52975734 | None:intergenic | 30.0% | |
!!! | AAGTTACCATCTTGTTGTTT+TGG | - | chr5_2:52975799-52975818 | None:intergenic | 30.0% |
GATGGTGATAAGAGTGATAA+TGG | + | chr5_2:52970011-52970030 | Msa0775810:CDS | 35.0% | |
GGAAATCGAAAAAGGAAAAG+AGG | + | chr5_2:52970032-52970051 | Msa0775810:CDS | 35.0% | |
ATGTTCTTAGGGTTTCTTTG+AGG | + | chr5_2:52970202-52970221 | Msa0775810:intron | 35.0% | |
TGTTCTTAGGGTTTCTTTGA+GGG | + | chr5_2:52970203-52970222 | Msa0775810:intron | 35.0% | |
ATACATGCATGTTGTGTGAA+TGG | + | chr5_2:52970548-52970567 | Msa0775810:intron | 35.0% | |
! | AACTTTTCAGTTGAGGAGTT+TGG | + | chr5_2:52970631-52970650 | Msa0775810:intron | 35.0% |
! | AGTTTGGAAGATGGTTTTCT+GGG | + | chr5_2:52970647-52970666 | Msa0775810:CDS | 35.0% |
!! | GGTGGATGTTTCTAATGTTT+TGG | + | chr5_2:52970772-52970791 | Msa0775810:CDS | 35.0% |
! | TCTTCATCTGCTTTAGATTG+TGG | + | chr5_2:52970806-52970825 | Msa0775810:CDS | 35.0% |
TTTATCCGTAACTCAATTGG+AGG | - | chr5_2:52970863-52970882 | None:intergenic | 35.0% | |
TCCAATTGAGTTACGGATAA+AGG | + | chr5_2:52970862-52970881 | Msa0775810:CDS | 35.0% | |
TCCTTTATCCGTAACTCAAT+TGG | - | chr5_2:52970866-52970885 | None:intergenic | 35.0% | |
ACATCAACACATTGTCCAAA+TGG | - | chr5_2:52970893-52970912 | None:intergenic | 35.0% | |
ATGTGAAATATCAGGATGCT+TGG | + | chr5_2:52970909-52970928 | Msa0775810:CDS | 35.0% | |
AGCATATTCTTCCCAGATTT+AGG | + | chr5_2:52970977-52970996 | Msa0775810:CDS | 35.0% | |
TTAGGTGATGAAATGAAGGT+TGG | + | chr5_2:52970995-52971014 | Msa0775810:CDS | 35.0% | |
TTGCTGAAACCATTAGAGAA+TGG | + | chr5_2:52971182-52971201 | Msa0775810:CDS | 35.0% | |
! | AGAATGGACTTGTAATGTGA+AGG | + | chr5_2:52971198-52971217 | Msa0775810:CDS | 35.0% |
ATTGTTTGGAAGGTTTAAGG+CGG | - | chr5_2:52971293-52971312 | None:intergenic | 35.0% | |
CTTCCAAACAATTTACTCGA+GGG | + | chr5_2:52971301-52971320 | Msa0775810:CDS | 35.0% | |
ATCAGTAACCAACAAGTTTG+AGG | - | chr5_2:52971434-52971453 | None:intergenic | 35.0% | |
TTGGTTACTGATCAAAACTG+TGG | + | chr5_2:52971442-52971461 | Msa0775810:CDS | 35.0% | |
! | GACGTTCTAAGTCCATAATT+TGG | + | chr5_2:52971623-52971642 | Msa0775810:CDS | 35.0% |
TTCCAAAGGCTTCCAAATTA+TGG | - | chr5_2:52971638-52971657 | None:intergenic | 35.0% | |
GCATACTCATCAATAACTTC+AGG | - | chr5_2:52971682-52971701 | None:intergenic | 35.0% | |
GTTATTGATGAGTATGCACT+TGG | + | chr5_2:52971685-52971704 | Msa0775810:CDS | 35.0% | |
ATCTTGGATGGACAATTGAA+TGG | + | chr5_2:52971767-52971786 | Msa0775810:CDS | 35.0% | |
!!! | ATGTGGAGGAGTATTGTTTT+CGG | - | chr5_2:52971794-52971813 | None:intergenic | 35.0% |
GAAAGATTGCTGTCAATTTG+AGG | - | chr5_2:52971925-52971944 | None:intergenic | 35.0% | |
TTTAACTGGAGAAGGTTCAT+TGG | - | chr5_2:52972004-52972023 | None:intergenic | 35.0% | |
TCACTCATTAGAGAGAAACT+CGG | + | chr5_2:52972074-52972093 | Msa0775810:CDS | 35.0% | |
TAGTCTTCCTTCTTTCAGTT+GGG | - | chr5_2:52972167-52972186 | None:intergenic | 35.0% | |
ATGATCAGAATTGGTCCATT+CGG | - | chr5_2:52972268-52972287 | None:intergenic | 35.0% | |
!!! | AGGCTCTTTTTGAAGCAATT+GGG | - | chr5_2:52972322-52972341 | None:intergenic | 35.0% |
CCATCTATAGTACGTAATTC+AGG | - | chr5_2:52972342-52972361 | None:intergenic | 35.0% | |
CCTGAATTACGTACTATAGA+TGG | + | chr5_2:52972339-52972358 | Msa0775810:CDS | 35.0% | |
AGCCTCAAAATATTCTGTCT+TGG | + | chr5_2:52972505-52972524 | Msa0775810:CDS | 35.0% | |
CAGTAAAAGACCTTGTACTT+TGG | - | chr5_2:52972555-52972574 | None:intergenic | 35.0% | |
! | CAAAGTACAAGGTCTTTTAC+TGG | + | chr5_2:52972553-52972572 | Msa0775810:CDS | 35.0% |
ACCTGTTGTCAGAATCTATA+TGG | + | chr5_2:52972639-52972658 | Msa0775810:CDS | 35.0% | |
TCCATATAGATTCTGACAAC+AGG | - | chr5_2:52972643-52972662 | None:intergenic | 35.0% | |
GGAGTTACATGGAAACAAAA+AGG | - | chr5_2:52972999-52973018 | None:intergenic | 35.0% | |
ACTGAATTGAAGGAGTTACA+TGG | - | chr5_2:52973010-52973029 | None:intergenic | 35.0% | |
AAGTTTCATTCTGCATGTGT+AGG | + | chr5_2:52973045-52973064 | Msa0775810:intron | 35.0% | |
AGTTTCATTCTGCATGTGTA+GGG | + | chr5_2:52973046-52973065 | Msa0775810:intron | 35.0% | |
TAAAACACATCGCAAAGGAA+TGG | - | chr5_2:52973223-52973242 | None:intergenic | 35.0% | |
CAAACTAAAACACATCGCAA+AGG | - | chr5_2:52973228-52973247 | None:intergenic | 35.0% | |
CGAGACGATATATGAAAGAT+TGG | + | chr5_2:52973355-52973374 | Msa0775810:CDS | 35.0% | |
!! | TATATGAAAGATTGGCTCTG+TGG | + | chr5_2:52973363-52973382 | Msa0775810:CDS | 35.0% |
! | AATATTTCTAAAAAGGGGGG+GGG | - | chr5_2:52973420-52973439 | None:intergenic | 35.0% |
!! | GGAGTAGTCAGTTTTGATAA+AGG | - | chr5_2:52973531-52973550 | None:intergenic | 35.0% |
TCAAGTGTTTGAATTGGATG+TGG | - | chr5_2:52973552-52973571 | None:intergenic | 35.0% | |
CTGAATAAAGAGCTCATTGT+TGG | - | chr5_2:52973586-52973605 | None:intergenic | 35.0% | |
TGAGCTCTTTATTCAGATCA+TGG | + | chr5_2:52973590-52973609 | Msa0775810:intron | 35.0% | |
! | AGTCGAGAATGCATGATTTT+TGG | + | chr5_2:52973653-52973672 | Msa0775810:intron | 35.0% |
CCAAAATCTATTAGGAAAGC+CGG | + | chr5_2:52973842-52973861 | Msa0775810:CDS | 35.0% | |
GGATAAGAATGTCTAACCTT+TGG | - | chr5_2:52974061-52974080 | None:intergenic | 35.0% | |
TGGAAAAGGCTCAAAATTGA+AGG | - | chr5_2:52974196-52974215 | None:intergenic | 35.0% | |
ATATTACCACCATGGTGTAA+TGG | - | chr5_2:52974216-52974235 | None:intergenic | 35.0% | |
TTACCTGAATATTACCACCA+TGG | - | chr5_2:52974224-52974243 | None:intergenic | 35.0% | |
GCAAAATCTATGCCTATAGA+TGG | + | chr5_2:52974499-52974518 | Msa0775810:intron | 35.0% | |
CTAATCATGATGCCATCTAT+AGG | - | chr5_2:52974514-52974533 | None:intergenic | 35.0% | |
TTTGTTTACTCCTCAAACAC+CGG | - | chr5_2:52974541-52974560 | None:intergenic | 35.0% | |
!! | GCATGCAAAAGTATCACTAT+AGG | + | chr5_2:52974687-52974706 | Msa0775810:intron | 35.0% |
AAAGTACATACATCAGCCAT+TGG | - | chr5_2:52974883-52974902 | None:intergenic | 35.0% | |
AATGGCTGATGTATGTACTT+TGG | + | chr5_2:52974882-52974901 | Msa0775810:intron | 35.0% | |
! | TGGAATGTGTCGCATTTTAA+TGG | + | chr5_2:52975170-52975189 | Msa0775810:CDS | 35.0% |
! | TTTAATGGATGAGCTCGAAA+AGG | + | chr5_2:52975185-52975204 | Msa0775810:CDS | 35.0% |
!! | TTTTGAGAGGTCAAAGTTTC+TGG | + | chr5_2:52975469-52975488 | Msa0775810:CDS | 35.0% |
GCCAAACTAACAGCTAATAT+AGG | - | chr5_2:52975602-52975621 | None:intergenic | 35.0% | |
AGTTTGGCATAATCACAATG+TGG | + | chr5_2:52975614-52975633 | Msa0775810:intron | 35.0% | |
TAAAGAGTTTCCTCACTGAT+TGG | + | chr5_2:52975737-52975756 | Msa0775810:intron | 35.0% | |
AGGTTATAATCCAATCAGTG+AGG | - | chr5_2:52975750-52975769 | None:intergenic | 35.0% | |
GATTAGCAAAAGAGGAATGA+TGG | + | chr5_2:52975885-52975904 | Msa0775810:CDS | 35.0% | |
!! | GAATGATGGATCTACAAGTT+TGG | + | chr5_2:52975899-52975918 | Msa0775810:CDS | 35.0% |
GTTCTTAGGGTTTCTTTGAG+GGG | + | chr5_2:52970204-52970223 | Msa0775810:intron | 40.0% | |
CAAGTGGAAAGATCAGATGA+AGG | - | chr5_2:52970580-52970599 | None:intergenic | 40.0% | |
! | GAGTTTGGAAGATGGTTTTC+TGG | + | chr5_2:52970646-52970665 | Msa0775810:CDS | 40.0% |
!!! | AAGATGGTTTTCTGGGATCA+TGG | + | chr5_2:52970654-52970673 | Msa0775810:CDS | 40.0% |
CGGATAAAGGATCTTCCATT+TGG | + | chr5_2:52970875-52970894 | Msa0775810:CDS | 40.0% | |
TGAAATATCAGGATGCTTGG+TGG | + | chr5_2:52970912-52970931 | Msa0775810:CDS | 40.0% | |
GAAATATCAGGATGCTTGGT+GGG | + | chr5_2:52970913-52970932 | Msa0775810:CDS | 40.0% | |
AGGTTGGAGTTAAACAACTG+AGG | + | chr5_2:52971011-52971030 | Msa0775810:CDS | 40.0% | |
TAAACAACTGAGGATCACTC+AGG | + | chr5_2:52971021-52971040 | Msa0775810:CDS | 40.0% | |
GGGATGAATCAACTGAGAAT+TGG | + | chr5_2:52971047-52971066 | Msa0775810:CDS | 40.0% | |
ACTGAGAATTGGTTACCAAG+AGG | + | chr5_2:52971058-52971077 | Msa0775810:CDS | 40.0% | |
CTGAGAATTGGTTACCAAGA+GGG | + | chr5_2:52971059-52971078 | Msa0775810:CDS | 40.0% | |
ATTGGTTACCAAGAGGGAAA+TGG | + | chr5_2:52971065-52971084 | Msa0775810:CDS | 40.0% | |
TTGGTTACCAAGAGGGAAAT+GGG | + | chr5_2:52971066-52971085 | Msa0775810:CDS | 40.0% | |
AGAAAAACCCATTTCCCTCT+TGG | - | chr5_2:52971076-52971095 | None:intergenic | 40.0% | |
! | GGTTTTTCTTGAGCTGTTTG+AGG | + | chr5_2:52971087-52971106 | Msa0775810:CDS | 40.0% |
CTTGTAATGTGAAGGAGTTG+TGG | + | chr5_2:52971206-52971225 | Msa0775810:CDS | 40.0% | |
!! | GACCTTGTTGTTGAGGTAAT+TGG | + | chr5_2:52971232-52971251 | Msa0775810:CDS | 40.0% |
CACCAATTACCTCAACAACA+AGG | - | chr5_2:52971237-52971256 | None:intergenic | 40.0% | |
! | TTGTTTGGAAGGTTTAAGGC+GGG | - | chr5_2:52971292-52971311 | None:intergenic | 40.0% |
CCTCGAGTAAATTGTTTGGA+AGG | - | chr5_2:52971303-52971322 | None:intergenic | 40.0% | |
CCTTCCAAACAATTTACTCG+AGG | + | chr5_2:52971300-52971319 | Msa0775810:CDS | 40.0% | |
TCTCCCTCGAGTAAATTGTT+TGG | - | chr5_2:52971307-52971326 | None:intergenic | 40.0% | |
TGCAATATCTGATAAGCCTG+AGG | + | chr5_2:52971396-52971415 | Msa0775810:CDS | 40.0% | |
AACCAACAAGTTTGAGGAGT+CGG | - | chr5_2:52971428-52971447 | None:intergenic | 40.0% | |
GTCCATAATTTGGAAGCCTT+TGG | + | chr5_2:52971633-52971652 | Msa0775810:CDS | 40.0% | |
TCAACTTCAGACAGTTCCAA+AGG | - | chr5_2:52971652-52971671 | None:intergenic | 40.0% | |
ATGAGTATGCACTTGGATGT+AGG | + | chr5_2:52971692-52971711 | Msa0775810:CDS | 40.0% | |
AGATTGCTGTCAATTTGAGG+TGG | - | chr5_2:52971922-52971941 | None:intergenic | 40.0% | |
TTGAAACCTTGGCTCATTTG+GGG | - | chr5_2:52971967-52971986 | None:intergenic | 40.0% | |
GTTGAAACCTTGGCTCATTT+GGG | - | chr5_2:52971968-52971987 | None:intergenic | 40.0% | |
! | GAACCAGAATTTTGTCCTCT+TGG | + | chr5_2:52972033-52972052 | Msa0775810:CDS | 40.0% |
ATGCCAAGAGGACAAAATTC+TGG | - | chr5_2:52972039-52972058 | None:intergenic | 40.0% | |
TAGTATTTCACGATGCCAAG+AGG | - | chr5_2:52972051-52972070 | None:intergenic | 40.0% | |
AACATCTGTTAGCAGAAGGA+TGG | + | chr5_2:52972130-52972149 | Msa0775810:CDS | 40.0% | |
TTGACTACCCAACTGAAAGA+AGG | + | chr5_2:52972157-52972176 | Msa0775810:CDS | 40.0% | |
GTAGTCTTCCTTCTTTCAGT+TGG | - | chr5_2:52972168-52972187 | None:intergenic | 40.0% | |
TCTCCACAAGATCAGTGTTT+AGG | + | chr5_2:52972198-52972217 | Msa0775810:CDS | 40.0% | |
TGATCAGAATTGGTCCATTC+GGG | - | chr5_2:52972267-52972286 | None:intergenic | 40.0% | |
GAATGGACCAATTCTGATCA+TGG | + | chr5_2:52972267-52972286 | Msa0775810:CDS | 40.0% | |
ATCACCACCATGATCAGAAT+TGG | - | chr5_2:52972277-52972296 | None:intergenic | 40.0% | |
!!! | CAGGCTCTTTTTGAAGCAAT+TGG | - | chr5_2:52972323-52972342 | None:intergenic | 40.0% |
TTACGGTTTCTCTTTGCAGT+TGG | - | chr5_2:52972372-52972391 | None:intergenic | 40.0% | |
TTGAAGTCCTTGTGCGTTTA+CGG | - | chr5_2:52972389-52972408 | None:intergenic | 40.0% | |
TAAACGCACAAGGACTTCAA+AGG | + | chr5_2:52972389-52972408 | Msa0775810:CDS | 40.0% | |
TTCAAAGGCTAGCACACAAA+AGG | + | chr5_2:52972404-52972423 | Msa0775810:CDS | 40.0% | |
! | TAGAGAGTGAAGTACTTACG+CGG | + | chr5_2:52972430-52972449 | Msa0775810:CDS | 40.0% |
GGTGCTAAGATCAAGCAAAA+GGG | + | chr5_2:52972452-52972471 | Msa0775810:CDS | 40.0% | |
!! | AAAAGGGTGCAGAAGGTTTT+GGG | + | chr5_2:52972468-52972487 | Msa0775810:CDS | 40.0% |
CATTGTGTTGCCAAAGTACA+AGG | + | chr5_2:52972542-52972561 | Msa0775810:CDS | 40.0% | |
GAAACTCTCCTACGTTTGAA+GGG | + | chr5_2:52972589-52972608 | Msa0775810:CDS | 40.0% | |
CAGAATCTATATGGACTCAG+CGG | + | chr5_2:52972648-52972667 | Msa0775810:CDS | 40.0% | |
GTCACTGTTAGATTGCATGA+GGG | + | chr5_2:52972740-52972759 | Msa0775810:CDS | 40.0% | |
TCACAGGACAAGAGAAATCA+CGG | + | chr5_2:52972776-52972795 | Msa0775810:CDS | 40.0% | |
CCTTCAAACAGATCATTGTG+CGG | - | chr5_2:52972807-52972826 | None:intergenic | 40.0% | |
TGTTCTGTTTGTAACTACGG+TGG | + | chr5_2:52972843-52972862 | Msa0775810:CDS | 40.0% | |
AATTCTTATGATACGCCGAG+GGG | - | chr5_2:52972893-52972912 | None:intergenic | 40.0% | |
CAATTCTTATGATACGCCGA+GGG | - | chr5_2:52972894-52972913 | None:intergenic | 40.0% | |
ACAATTCTTATGATACGCCG+AGG | - | chr5_2:52972895-52972914 | None:intergenic | 40.0% | |
GACAAAACCAATCACCATCA+GGG | - | chr5_2:52973075-52973094 | None:intergenic | 40.0% | |
AAAATTGAAGAGACCGAGGA+TGG | + | chr5_2:52973127-52973146 | Msa0775810:CDS | 40.0% | |
!! | AGTAAGAAAGTGTCCATCCT+CGG | - | chr5_2:52973143-52973162 | None:intergenic | 40.0% |
! | ATATTTCTAAAAAGGGGGGG+GGG | - | chr5_2:52973419-52973438 | None:intergenic | 40.0% |
!! | GCACTTTTTGCAGGTCTATA+CGG | + | chr5_2:52973815-52973834 | Msa0775810:intron | 40.0% |
!! | CACTTTTTGCAGGTCTATAC+GGG | + | chr5_2:52973816-52973835 | Msa0775810:intron | 40.0% |
! | ACTTTTTGCAGGTCTATACG+GGG | + | chr5_2:52973817-52973836 | Msa0775810:intron | 40.0% |
! | CCGGCTTTCCTAATAGATTT+TGG | - | chr5_2:52973845-52973864 | None:intergenic | 40.0% |
!! | ATTAGGAAAGCCGGTTTTAG+TGG | + | chr5_2:52973851-52973870 | Msa0775810:CDS | 40.0% |
!! | TTAGGAAAGCCGGTTTTAGT+GGG | + | chr5_2:52973852-52973871 | Msa0775810:CDS | 40.0% |
GGACAATCTAACTTGGACAT+TGG | + | chr5_2:52973878-52973897 | Msa0775810:CDS | 40.0% | |
!! | TATGTCAACTCTGAGACTTG+CGG | + | chr5_2:52973906-52973925 | Msa0775810:CDS | 40.0% |
CGATATCTCTGCTAGAGAAA+GGG | - | chr5_2:52974019-52974038 | None:intergenic | 40.0% | |
ACGATATCTCTGCTAGAGAA+AGG | - | chr5_2:52974020-52974039 | None:intergenic | 40.0% | |
! | GTAAGCAAAGCTATTTCAGC+AGG | - | chr5_2:52974174-52974193 | None:intergenic | 40.0% |
ACACCATGGTGGTAATATTC+AGG | + | chr5_2:52974218-52974237 | Msa0775810:intron | 40.0% | |
TAGTGTTAGGGCAAAGTTTG+CGG | + | chr5_2:52974360-52974379 | Msa0775810:intron | 40.0% | |
! | CGGCTTTATGTTTATCATGC+AGG | + | chr5_2:52974380-52974399 | Msa0775810:intron | 40.0% |
TCATGCAGGATGGAATTTCT+TGG | + | chr5_2:52974394-52974413 | Msa0775810:intron | 40.0% | |
TCTTTGAGTCCATTCACTGA+TGG | + | chr5_2:52974775-52974794 | Msa0775810:intron | 40.0% | |
TTATATTCACACTGCGCCAA+TGG | + | chr5_2:52974864-52974883 | Msa0775810:intron | 40.0% | |
!! | TATGTACTTTGGAACCTCGT+AGG | + | chr5_2:52974893-52974912 | Msa0775810:intron | 40.0% |
CTCAATCGACTAAACTTCCA+GGG | + | chr5_2:52974922-52974941 | Msa0775810:CDS | 40.0% | |
GAAGTACAGTATAGAAACCC+TGG | - | chr5_2:52974942-52974961 | None:intergenic | 40.0% | |
AAGTCGTCTGTACTGAAATC+TGG | - | chr5_2:52975151-52975170 | None:intergenic | 40.0% | |
AGATTTCAGTACAGACGACT+TGG | + | chr5_2:52975150-52975169 | Msa0775810:CDS | 40.0% | |
AATTATCTTGATACGGCCTG+TGG | + | chr5_2:52975263-52975282 | Msa0775810:intron | 40.0% | |
TCATCAGAAGCTAAAGCAAC+TGG | + | chr5_2:52975364-52975383 | Msa0775810:intron | 40.0% | |
CATCAGAAGCTAAAGCAACT+GGG | + | chr5_2:52975365-52975384 | Msa0775810:intron | 40.0% | |
! | GACACATGGACGAATTCTTT+TGG | + | chr5_2:52975428-52975447 | Msa0775810:CDS | 40.0% |
! | AGCAGATGACGAATTTTGAG+AGG | + | chr5_2:52975456-52975475 | Msa0775810:CDS | 40.0% |
TGACAGTTCCTTGAAAGTCT+AGG | - | chr5_2:52975505-52975524 | None:intergenic | 40.0% | |
GTTGACAAGATTTCCATCTC+CGG | + | chr5_2:52975538-52975557 | Msa0775810:intron | 40.0% | |
AAGATTTCCATCTCCGGAAT+CGG | + | chr5_2:52975544-52975563 | Msa0775810:intron | 40.0% | |
CAGTTGAGGAGTTTGGAAGA+TGG | + | chr5_2:52970638-52970657 | Msa0775810:intron | 45.0% | |
GGAAAATTATCCGCTGTGGA+AGG | + | chr5_2:52970684-52970703 | Msa0775810:CDS | 45.0% | |
TTAGATTGTGGCTATCAGCG+AGG | + | chr5_2:52970818-52970837 | Msa0775810:CDS | 45.0% | |
AACTCAATTGGAGGCGGTAA+CGG | - | chr5_2:52970854-52970873 | None:intergenic | 45.0% | |
TACCGCCTCCAATTGAGTTA+CGG | + | chr5_2:52970855-52970874 | Msa0775810:CDS | 45.0% | |
ATCCGTAACTCAATTGGAGG+CGG | - | chr5_2:52970860-52970879 | None:intergenic | 45.0% | |
AACTGAGGATCACTCAGGAT+TGG | + | chr5_2:52971026-52971045 | Msa0775810:CDS | 45.0% | |
ACTGAGGATCACTCAGGATT+GGG | + | chr5_2:52971027-52971046 | Msa0775810:CDS | 45.0% | |
GGTATCCTATGTTGCAGTCT+CGG | + | chr5_2:52971120-52971139 | Msa0775810:CDS | 45.0% | |
TTTCACCGAGACTGCAACAT+AGG | - | chr5_2:52971128-52971147 | None:intergenic | 45.0% | |
CAGTCTCGGTGAAACAGATT+TGG | + | chr5_2:52971134-52971153 | Msa0775810:CDS | 45.0% | |
GCGAACTTCGCTTAATGTGA+GGG | - | chr5_2:52971269-52971288 | None:intergenic | 45.0% | |
! | TGTTTGGAAGGTTTAAGGCG+GGG | - | chr5_2:52971291-52971310 | None:intergenic | 45.0% |
CATTGTGACGCTGCTAATCA+AGG | + | chr5_2:52971352-52971371 | Msa0775810:CDS | 45.0% | |
GCTAATCAAGGCGATGCATT+TGG | + | chr5_2:52971364-52971383 | Msa0775810:CDS | 45.0% | |
CAGCACAAGCATCATTCCTT+TGG | + | chr5_2:52971465-52971484 | Msa0775810:CDS | 45.0% | |
CACAAGCATCATTCCTTTGG+TGG | + | chr5_2:52971468-52971487 | Msa0775810:CDS | 45.0% | |
! | CATCATTCCTTTGGTGGATG+AGG | + | chr5_2:52971474-52971493 | Msa0775810:CDS | 45.0% |
TCAAAGTCCTCATCCACCAA+AGG | - | chr5_2:52971484-52971503 | None:intergenic | 45.0% | |
GGTGGATGTGGAATTTGAGA+AGG | + | chr5_2:52971552-52971571 | Msa0775810:CDS | 45.0% | |
ACTTGGATGTAGGAGCAAGA+CGG | + | chr5_2:52971702-52971721 | Msa0775810:CDS | 45.0% | |
! | TTGTACCGGTATCGTCTATG+TGG | - | chr5_2:52971811-52971830 | None:intergenic | 45.0% |
GTTTATCCGGAGACTTGTAC+CGG | - | chr5_2:52971825-52971844 | None:intergenic | 45.0% | |
GAGGATCCTAACATGAACTC+TGG | + | chr5_2:52971895-52971914 | Msa0775810:CDS | 45.0% | |
CGTTGAAACCTTGGCTCATT+TGG | - | chr5_2:52971969-52971988 | None:intergenic | 45.0% | |
GAGGACAAACGTTGAAACCT+TGG | - | chr5_2:52971978-52971997 | None:intergenic | 45.0% | |
ACTGGAGAAGGTTCATTGGT+TGG | - | chr5_2:52972000-52972019 | None:intergenic | 45.0% | |
ACTCGGCTGATAAGAGAAAG+TGG | + | chr5_2:52972091-52972110 | Msa0775810:CDS | 45.0% | |
GTGCCTAAACACTGATCTTG+TGG | - | chr5_2:52972204-52972223 | None:intergenic | 45.0% | |
CAGTGTTTAGGCACACTTCA+AGG | + | chr5_2:52972210-52972229 | Msa0775810:CDS | 45.0% | |
TGGACCAATTCTGATCATGG+TGG | + | chr5_2:52972270-52972289 | Msa0775810:CDS | 45.0% | |
AGAGAAACCGTAAACGCACA+AGG | + | chr5_2:52972379-52972398 | Msa0775810:CDS | 45.0% | |
! | AGAGAGTGAAGTACTTACGC+GGG | + | chr5_2:52972431-52972450 | Msa0775810:CDS | 45.0% |
GGGTGCTAAGATCAAGCAAA+AGG | + | chr5_2:52972451-52972470 | Msa0775810:CDS | 45.0% | |
! | ATCAAGCAAAAGGGTGCAGA+AGG | + | chr5_2:52972461-52972480 | Msa0775810:CDS | 45.0% |
!! | CAAAAGGGTGCAGAAGGTTT+TGG | + | chr5_2:52972467-52972486 | Msa0775810:CDS | 45.0% |
! | GTCTTTTACTGGGAAACCGA+AGG | + | chr5_2:52972564-52972583 | Msa0775810:CDS | 45.0% |
! | TTTTACTGGGAAACCGAAGG+AGG | + | chr5_2:52972567-52972586 | Msa0775810:CDS | 45.0% |
GGAAACTCTCCTACGTTTGA+AGG | + | chr5_2:52972588-52972607 | Msa0775810:CDS | 45.0% | |
GTTATCCTCCCTTCAAACGT+AGG | - | chr5_2:52972600-52972619 | None:intergenic | 45.0% | |
GGATAACTCGCGAAGGAATT+AGG | + | chr5_2:52972613-52972632 | Msa0775810:CDS | 45.0% | |
AAGCAGTAACTGCAGACCTT+CGG | + | chr5_2:52972692-52972711 | Msa0775810:CDS | 45.0% | |
GGTCACTGTTAGATTGCATG+AGG | + | chr5_2:52972739-52972758 | Msa0775810:CDS | 45.0% | |
GGGAAGTAATGCAAGATCAC+AGG | + | chr5_2:52972760-52972779 | Msa0775810:CDS | 45.0% | |
CCGCACAATGATCTGTTTGA+AGG | + | chr5_2:52972804-52972823 | Msa0775810:CDS | 45.0% | |
!! | GGCATGAAGCACTGAATTGA+AGG | - | chr5_2:52973020-52973039 | None:intergenic | 45.0% |
GGACAAAACCAATCACCATC+AGG | - | chr5_2:52973076-52973095 | None:intergenic | 45.0% | |
! | TTTTGTCCATCATGCCGTTG+CGG | + | chr5_2:52973088-52973107 | Msa0775810:CDS | 45.0% |
ACACATCGCAAAGGAATGGA+TGG | - | chr5_2:52973219-52973238 | None:intergenic | 45.0% | |
! | TCTGTGGAGAAGAGTGTGAA+CGG | + | chr5_2:52973379-52973398 | Msa0775810:CDS | 45.0% |
! | TATTTCTAAAAAGGGGGGGG+GGG | - | chr5_2:52973418-52973437 | None:intergenic | 45.0% |
!! | TACGCGTATGCACTTTTTGC+AGG | + | chr5_2:52973806-52973825 | Msa0775810:intron | 45.0% |
ACGGGGCTCCAAAATCTATT+AGG | + | chr5_2:52973834-52973853 | Msa0775810:CDS | 45.0% | |
!! | TAGGAAAGCCGGTTTTAGTG+GGG | + | chr5_2:52973853-52973872 | Msa0775810:CDS | 45.0% |
TGCTGAAAGTGACTTAGTGG+CGG | + | chr5_2:52973929-52973948 | Msa0775810:CDS | 45.0% | |
! | CAAACTGAGTGTTGCACTCT+CGG | + | chr5_2:52973962-52973981 | Msa0775810:CDS | 45.0% |
CTAGAGAAAGGGTTATGCAG+GGG | - | chr5_2:52974008-52974027 | None:intergenic | 45.0% | |
GCTAGAGAAAGGGTTATGCA+GGG | - | chr5_2:52974009-52974028 | None:intergenic | 45.0% | |
TGCTAGAGAAAGGGTTATGC+AGG | - | chr5_2:52974010-52974029 | None:intergenic | 45.0% | |
! | GAGCCTTTTCCATTACACCA+TGG | + | chr5_2:52974204-52974223 | Msa0775810:intron | 45.0% |
! | CCACCATGGTGTAATGGAAA+AGG | - | chr5_2:52974210-52974229 | None:intergenic | 45.0% |
! | CCTTTTCCATTACACCATGG+TGG | + | chr5_2:52974207-52974226 | Msa0775810:intron | 45.0% |
TGGCATCATGATTAGTGAGC+CGG | + | chr5_2:52974519-52974538 | Msa0775810:intron | 45.0% | |
GCTCAATCGACTAAACTTCC+AGG | + | chr5_2:52974921-52974940 | Msa0775810:CDS | 45.0% | |
TGAAATCTGGTACCTACGAG+GGG | - | chr5_2:52975138-52975157 | None:intergenic | 45.0% | |
CTGAAATCTGGTACCTACGA+GGG | - | chr5_2:52975139-52975158 | None:intergenic | 45.0% | |
ACTGAAATCTGGTACCTACG+AGG | - | chr5_2:52975140-52975159 | None:intergenic | 45.0% | |
! | CCTCTTGTTACAACCGATTC+CGG | - | chr5_2:52975560-52975579 | None:intergenic | 45.0% |
GCGACTCCAAAACAACAAGA+TGG | + | chr5_2:52975790-52975809 | Msa0775810:CDS | 45.0% | |
GCTTGATCCACTTCAGATAC+TGG | - | chr5_2:52975859-52975878 | None:intergenic | 45.0% | |
! | TCTGAAGTGGATCAAGCAGA+AGG | + | chr5_2:52975862-52975881 | Msa0775810:CDS | 45.0% |
CTGAAGTGGATCAAGCAGAA+GGG | + | chr5_2:52975863-52975882 | Msa0775810:CDS | 45.0% | |
! | GCAGAAGGGATTAGCAAAAG+AGG | + | chr5_2:52975877-52975896 | Msa0775810:CDS | 45.0% |
!! | TTTCTGGGATCATGGCATCC+AGG | + | chr5_2:52970662-52970681 | Msa0775810:CDS | 50.0% |
!! | TTCTGGGATCATGGCATCCA+GGG | + | chr5_2:52970663-52970682 | Msa0775810:CDS | 50.0% |
! | CCACAGCGGATAATTTTCCC+TGG | - | chr5_2:52970683-52970702 | None:intergenic | 50.0% |
CCAGGGAAAATTATCCGCTG+TGG | + | chr5_2:52970680-52970699 | Msa0775810:CDS | 50.0% | |
! | TATCAGGATGCTTGGTGGGA+AGG | + | chr5_2:52970917-52970936 | Msa0775810:CDS | 50.0% |
GTGATATTCGATCGCTGCGA+TGG | + | chr5_2:52970941-52970960 | Msa0775810:CDS | 50.0% | |
GCTGCGATGGAATGAAGGAT+AGG | + | chr5_2:52970954-52970973 | Msa0775810:CDS | 50.0% | |
! | AGCTGTTTGAGGAGTGTGAG+AGG | + | chr5_2:52971098-52971117 | Msa0775810:CDS | 50.0% |
! | GCTGTTTGAGGAGTGTGAGA+GGG | + | chr5_2:52971099-52971118 | Msa0775810:CDS | 50.0% |
!! | GTGGAGAGACCTTGTTGTTG+AGG | + | chr5_2:52971225-52971244 | Msa0775810:CDS | 50.0% |
GGCGAACTTCGCTTAATGTG+AGG | - | chr5_2:52971270-52971289 | None:intergenic | 50.0% | |
! | GGTGGATGAGGACTTTGAGA+AGG | + | chr5_2:52971486-52971505 | Msa0775810:CDS | 50.0% |
GATGTAGGAGCAAGACGGTT+CGG | + | chr5_2:52971707-52971726 | Msa0775810:CDS | 50.0% | |
ATGTAGGAGCAAGACGGTTC+GGG | + | chr5_2:52971708-52971727 | Msa0775810:CDS | 50.0% | |
CTCCTCCACATAGACGATAC+CGG | + | chr5_2:52971803-52971822 | Msa0775810:CDS | 50.0% | |
TACCGGTATCGTCTATGTGG+AGG | - | chr5_2:52971808-52971827 | None:intergenic | 50.0% | |
ACGATACCGGTACAAGTCTC+CGG | + | chr5_2:52971816-52971835 | Msa0775810:CDS | 50.0% | |
GGTGGTCCAGAGTTCATGTT+AGG | - | chr5_2:52971904-52971923 | None:intergenic | 50.0% | |
AAACCTTGGCTCATTTGGGG+TGG | - | chr5_2:52971964-52971983 | None:intergenic | 50.0% | |
! | GGAGAAGGTTCATTGGTTGG+AGG | - | chr5_2:52971997-52972016 | None:intergenic | 50.0% |
CGGTTTCTCTTTGCAGTTGG+TGG | - | chr5_2:52972369-52972388 | None:intergenic | 50.0% | |
CGTAGGAGAGTTTCCTCCTT+CGG | - | chr5_2:52972583-52972602 | None:intergenic | 50.0% | |
ACTCTCCTACGTTTGAAGGG+AGG | + | chr5_2:52972592-52972611 | Msa0775810:CDS | 50.0% | |
AGTTACTGCTTCCACCAGCA+TGG | - | chr5_2:52972683-52972702 | None:intergenic | 50.0% | |
TTTATGCGACCAATGCCCCT+CGG | + | chr5_2:52972875-52972894 | Msa0775810:CDS | 50.0% | |
TTTGTCCATCATGCCGTTGC+GGG | + | chr5_2:52973089-52973108 | Msa0775810:CDS | 50.0% | |
! | CTGTGGAGAAGAGTGTGAAC+GGG | + | chr5_2:52973380-52973399 | Msa0775810:CDS | 50.0% |
! | ATTTCTAAAAAGGGGGGGGG+GGG | - | chr5_2:52973417-52973436 | None:intergenic | 50.0% |
!! | AGGAAAGCCGGTTTTAGTGG+GGG | + | chr5_2:52973854-52973873 | Msa0775810:CDS | 50.0% |
! | CGGTGCTGAAAGTGACTTAG+TGG | + | chr5_2:52973926-52973945 | Msa0775810:CDS | 50.0% |
GATTAGTGAGCCGGTGTTTG+AGG | + | chr5_2:52974528-52974547 | Msa0775810:intron | 50.0% | |
GAAGCTAAAGCAACTGGGAG+TGG | + | chr5_2:52975370-52975389 | Msa0775810:intron | 50.0% | |
! | GTTACAACCGATTCCGGAGA+TGG | - | chr5_2:52975554-52975573 | None:intergenic | 50.0% |
CCGGAATCGGTTGTAACAAG+AGG | + | chr5_2:52975557-52975576 | Msa0775810:intron | 50.0% | |
! | GGCTAGTCCAGTATCTGAAG+TGG | + | chr5_2:52975849-52975868 | Msa0775810:CDS | 50.0% |
AACGCGTCTTCCTTCCACAG+CGG | - | chr5_2:52970697-52970716 | None:intergenic | 55.0% | |
! | GAGGCGGTAACGGTCTAATC+AGG | - | chr5_2:52970844-52970863 | None:intergenic | 55.0% |
CGATCGCTGCGATGGAATGA+AGG | + | chr5_2:52970949-52970968 | Msa0775810:CDS | 55.0% | |
!! | CGCCGACTCCTCAAACTTGT+TGG | + | chr5_2:52971423-52971442 | Msa0775810:CDS | 55.0% |
GATCCACCCCAAATGAGCCA+AGG | + | chr5_2:52971958-52971977 | Msa0775810:CDS | 55.0% | |
GAAGGGAGGATAACTCGCGA+AGG | + | chr5_2:52972606-52972625 | Msa0775810:CDS | 55.0% | |
AGCGGCTTTGCAAACCATGC+TGG | + | chr5_2:52972666-52972685 | Msa0775810:CDS | 55.0% | |
GGCTTTGCAAACCATGCTGG+TGG | + | chr5_2:52972669-52972688 | Msa0775810:CDS | 55.0% | |
! | TATGATACGCCGAGGGGCAT+TGG | - | chr5_2:52972887-52972906 | None:intergenic | 55.0% |
! | CATGTGTAGGGCATCCCTGA+TGG | + | chr5_2:52973058-52973077 | Msa0775810:intron | 55.0% |
! | AGGGCATCCCTGATGGTGAT+TGG | + | chr5_2:52973065-52973084 | Msa0775810:intron | 55.0% |
CAAATCCCGCAACGGCATGA+TGG | - | chr5_2:52973097-52973116 | None:intergenic | 55.0% | |
TCATGCCGTTGCGGGATTTG+CGG | + | chr5_2:52973097-52973116 | Msa0775810:CDS | 55.0% | |
TTTGGCCGCAAATCCCGCAA+CGG | - | chr5_2:52973105-52973124 | None:intergenic | 55.0% | |
! | TTTCTAAAAAGGGGGGGGGG+GGG | - | chr5_2:52973416-52973435 | None:intergenic | 55.0% |
!! | AAAGCCGGTTTTAGTGGGGG+CGG | + | chr5_2:52973857-52973876 | Msa0775810:CDS | 55.0% |
TTGTCCGCCCCCACTAAAAC+CGG | - | chr5_2:52973864-52973883 | None:intergenic | 55.0% | |
TGGGGGCGGACAATCTAACT+TGG | + | chr5_2:52973871-52973890 | Msa0775810:CDS | 55.0% | |
CGATTGAGCTCAGACCTACG+AGG | - | chr5_2:52974910-52974929 | None:intergenic | 55.0% | |
!! | ATAGCAGAAGTGCCCCTCGT+AGG | + | chr5_2:52975123-52975142 | Msa0775810:CDS | 55.0% |
!! | CTAGTCTTGCCTGCTGTTCC+CGG | + | chr5_2:52975398-52975417 | Msa0775810:CDS | 55.0% |
TTCCCGGTGTGCTAGACACA+TGG | + | chr5_2:52975414-52975433 | Msa0775810:CDS | 55.0% | |
GTCCATGTGTCTAGCACACC+GGG | - | chr5_2:52975419-52975438 | None:intergenic | 55.0% | |
CGTCCATGTGTCTAGCACAC+CGG | - | chr5_2:52975420-52975439 | None:intergenic | 55.0% | |
! | GAGGAGTCGGCGTTTTCCTC+AGG | - | chr5_2:52971415-52971434 | None:intergenic | 60.0% |
TCTAGCACACCGGGAACAGC+AGG | - | chr5_2:52975410-52975429 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 52970002 | 52975933 | 52970002 | ID=Msa0775810;Name=Msa0775810 |
chr5_2 | mRNA | 52970002 | 52975933 | 52970002 | ID=Msa0775810-mRNA-1;Parent=Msa0775810;Name=Msa0775810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.88|1|1|9|0|1102 |
chr5_2 | exon | 52970002 | 52970094 | 52970002 | ID=Msa0775810-mRNA-1:exon:15811;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52970641 | 52972926 | 52970641 | ID=Msa0775810-mRNA-1:exon:15812;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52973067 | 52973184 | 52973067 | ID=Msa0775810-mRNA-1:exon:15813;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52973316 | 52973401 | 52973316 | ID=Msa0775810-mRNA-1:exon:15814;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52973828 | 52974063 | 52973828 | ID=Msa0775810-mRNA-1:exon:15815;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52974915 | 52975001 | 52974915 | ID=Msa0775810-mRNA-1:exon:15816;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52975107 | 52975206 | 52975107 | ID=Msa0775810-mRNA-1:exon:15817;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52975371 | 52975527 | 52975371 | ID=Msa0775810-mRNA-1:exon:15818;Parent=Msa0775810-mRNA-1 |
chr5_2 | exon | 52975788 | 52975933 | 52975788 | ID=Msa0775810-mRNA-1:exon:15819;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52970002 | 52970094 | 52970002 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52970641 | 52972926 | 52970641 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52973067 | 52973184 | 52973067 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52973316 | 52973401 | 52973316 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52973828 | 52974063 | 52973828 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52974915 | 52975001 | 52974915 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52975107 | 52975206 | 52975107 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52975371 | 52975527 | 52975371 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
chr5_2 | CDS | 52975788 | 52975933 | 52975788 | ID=Msa0775810-mRNA-1:cds;Parent=Msa0775810-mRNA-1 |
Gene Sequence |
Protein sequence |