Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776710 | AES80711.1 | 72.045 | 440 | 112 | 6 | 1 | 438 | 2 | 432 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776710 | G7KX87 | 72.045 | 440 | 112 | 6 | 1 | 438 | 2 | 432 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0776710 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776710 | MtrunA17_Chr7g0252101 | 72.045 | 440 | 112 | 6 | 1 | 438 | 2 | 432 | 0.0 | 622 |
| Msa0776710 | MtrunA17_Chr3g0093911 | 68.286 | 350 | 110 | 1 | 89 | 438 | 2 | 350 | 1.86e-167 | 474 |
| Msa0776710 | MtrunA17_Chr1g0207351 | 67.614 | 352 | 108 | 3 | 92 | 438 | 16 | 366 | 1.30e-160 | 457 |
| Msa0776710 | MtrunA17_Chr4g0075971 | 50.998 | 451 | 204 | 6 | 1 | 438 | 156 | 602 | 2.32e-134 | 399 |
| Msa0776710 | MtrunA17_Chr6g0488101 | 46.187 | 459 | 210 | 12 | 9 | 438 | 5 | 455 | 4.12e-116 | 347 |
| Msa0776710 | MtrunA17_Chr3g0077801 | 53.561 | 351 | 152 | 6 | 91 | 435 | 4 | 349 | 4.66e-114 | 338 |
| Msa0776710 | MtrunA17_Chr3g0077901 | 52.925 | 359 | 158 | 6 | 85 | 437 | 18 | 371 | 2.88e-113 | 337 |
| Msa0776710 | MtrunA17_Chr6g0488271 | 47.506 | 421 | 190 | 10 | 41 | 438 | 3 | 415 | 1.06e-112 | 337 |
| Msa0776710 | MtrunA17_Chr1g0209051 | 64.945 | 271 | 90 | 4 | 170 | 437 | 2 | 270 | 9.11e-112 | 329 |
| Msa0776710 | MtrunA17_Chr3g0077851 | 53.529 | 340 | 147 | 6 | 104 | 437 | 1 | 335 | 2.95e-107 | 320 |
| Msa0776710 | MtrunA17_Chr7g0243331 | 52.408 | 353 | 153 | 9 | 93 | 438 | 6 | 350 | 8.85e-102 | 307 |
| Msa0776710 | MtrunA17_Chr3g0112311 | 49.030 | 361 | 164 | 7 | 89 | 436 | 2 | 355 | 6.85e-96 | 292 |
| Msa0776710 | MtrunA17_Chr3g0122991 | 44.753 | 324 | 116 | 7 | 90 | 402 | 2 | 273 | 3.00e-77 | 241 |
| Msa0776710 | MtrunA17_Chr6g0452641 | 45.092 | 326 | 154 | 9 | 130 | 438 | 23 | 340 | 2.16e-70 | 226 |
| Msa0776710 | MtrunA17_Chr1g0202841 | 65.169 | 178 | 59 | 2 | 263 | 438 | 3 | 179 | 2.92e-70 | 220 |
| Msa0776710 | MtrunA17_Chr3g0123471 | 49.242 | 264 | 116 | 9 | 172 | 428 | 5 | 257 | 5.48e-62 | 201 |
| Msa0776710 | MtrunA17_Chr7g0243391 | 50.230 | 217 | 100 | 5 | 83 | 295 | 13 | 225 | 6.61e-53 | 177 |
| Msa0776710 | MtrunA17_Chr4g0075861 | 51.000 | 200 | 90 | 3 | 16 | 209 | 176 | 373 | 8.78e-50 | 173 |
| Msa0776710 | MtrunA17_Chr5g0431721 | 88.235 | 85 | 10 | 0 | 1 | 85 | 1 | 85 | 4.19e-48 | 160 |
| Msa0776710 | MtrunA17_Chr1g0196231 | 60.811 | 148 | 51 | 5 | 85 | 230 | 224 | 366 | 1.06e-46 | 164 |
| Msa0776710 | MtrunA17_Chr1g0206951 | 66.372 | 113 | 38 | 0 | 91 | 203 | 2 | 114 | 2.31e-46 | 156 |
| Msa0776710 | MtrunA17_Chr1g0187941 | 60.150 | 133 | 53 | 0 | 265 | 397 | 5 | 137 | 1.79e-45 | 154 |
| Msa0776710 | MtrunA17_Chr6g0486591 | 46.914 | 162 | 72 | 4 | 288 | 438 | 1 | 159 | 4.24e-33 | 122 |
| Msa0776710 | MtrunA17_Chr1g0209191 | 63.725 | 102 | 26 | 3 | 343 | 437 | 1 | 98 | 5.86e-32 | 117 |
| Msa0776710 | MtrunA17_Chr1g0196241 | 67.778 | 90 | 24 | 3 | 334 | 422 | 3 | 88 | 3.05e-30 | 112 |
| Msa0776710 | MtrunA17_Chr6g0459061 | 27.635 | 351 | 205 | 12 | 105 | 434 | 27 | 349 | 2.93e-24 | 103 |
| Msa0776710 | MtrunA17_Chr7g0238781 | 41.481 | 135 | 73 | 4 | 120 | 251 | 27 | 158 | 9.85e-21 | 88.6 |
| Msa0776710 | MtrunA17_Chr1g0209061 | 41.732 | 127 | 53 | 4 | 1 | 127 | 2 | 107 | 2.22e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 99 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCTATCAATCTCGAAAT+TGG | 0.196796 | 5_2:+55214378 | Msa0776710:CDS |
| AAGAGGATGGAGTACTTCTT+AGG | 0.228211 | 5_2:+55214143 | Msa0776710:CDS |
| TACTCGATAAAGGAAAATTA+TGG | 0.254055 | 5_2:+55214413 | Msa0776710:CDS |
| CTAACATAAGTGAATTATTA+TGG | 0.265354 | 5_2:-55214214 | None:intergenic |
| ACAACATGCAATGTCTATTC+AGG | 0.268380 | 5_2:+55214812 | Msa0776710:CDS |
| CTCTCGTATCCCCACCTGTT+GGG | 0.277051 | 5_2:-55214758 | None:intergenic |
| AATTTATTGGAGAAATTTCT+TGG | 0.278696 | 5_2:+55214028 | Msa0776710:CDS |
| GGGTGTTTCATCAAATTTAT+TGG | 0.285690 | 5_2:+55214015 | Msa0776710:CDS |
| AGGCATCAGGGTTTATTATT+CGG | 0.287310 | 5_2:+55211925 | Msa0776710:CDS |
| TTTCAGTTCGACATAATTCA+TGG | 0.342579 | 5_2:-55214666 | None:intergenic |
| GATCGTGCCTTTCTTGCTTT+CGG | 0.347848 | 5_2:+55214305 | Msa0776710:CDS |
| TTTGAAGAAGTAATGGTTCC+TGG | 0.358275 | 5_2:-55214055 | None:intergenic |
| TGCACTGGAGTATCTTCTTA+AGG | 0.379025 | 5_2:+55211774 | Msa0776710:CDS |
| TGTCTATCAATCTCGAAATT+GGG | 0.383347 | 5_2:+55214379 | Msa0776710:CDS |
| TTGGGCTACTTACTCGATAA+AGG | 0.386334 | 5_2:+55214403 | Msa0776710:CDS |
| CTCAAAGCATAACAATTTCC+CGG | 0.389456 | 5_2:-55214731 | None:intergenic |
| TGGGAGGGTTGTTGACTTTG+CGG | 0.398944 | 5_2:+55214433 | Msa0776710:CDS |
| TGGGATGCTTCAAAGGCATC+AGG | 0.403391 | 5_2:+55211912 | Msa0776710:CDS |
| TTGGCGGTGTATGCAAGAAT+TGG | 0.404558 | 5_2:+55213991 | Msa0776710:CDS |
| CTCTGAGGAATTTATCTTGG+TGG | 0.409746 | 5_2:+55214334 | Msa0776710:CDS |
| TTGGTCGGGTATGGTAATAA+AGG | 0.413147 | 5_2:-55214105 | None:intergenic |
| GTGAAGGAACTTGTTCCATT+AGG | 0.416415 | 5_2:-55214878 | None:intergenic |
| GATACTCCAGTGCATGTTCA+TGG | 0.422585 | 5_2:-55211765 | None:intergenic |
| GACATTGCATTACTTTATGT+TGG | 0.423488 | 5_2:+55214698 | Msa0776710:CDS |
| ACTCGATAAAGGAAAATTAT+GGG | 0.431349 | 5_2:+55214414 | Msa0776710:CDS |
| ATGCTTTGAGCAACCCCAAC+AGG | 0.432988 | 5_2:+55214744 | Msa0776710:CDS |
| ACATTGCATTACTTTATGTT+GGG | 0.436200 | 5_2:+55214699 | Msa0776710:CDS |
| TTATGTCGAACTGAAAACTT+TGG | 0.436887 | 5_2:+55214673 | Msa0776710:CDS |
| GCATCCCACTAACTCTTGAT+TGG | 0.437559 | 5_2:-55211897 | None:intergenic |
| ATGCTCTGAGGAATTTATCT+TGG | 0.438890 | 5_2:+55214331 | Msa0776710:CDS |
| AACCTAAGGTATCTGTGAAA+TGG | 0.439413 | 5_2:-55214563 | None:intergenic |
| GACGACCACTTTCAGTTTGG+CGG | 0.443904 | 5_2:+55213975 | Msa0776710:CDS |
| TTTGACGACCACTTTCAGTT+TGG | 0.447335 | 5_2:+55213972 | Msa0776710:CDS |
| ATTACACTTCCAGCTCCTAA+TGG | 0.449234 | 5_2:+55214863 | Msa0776710:CDS |
| TATGTCGAACTGAAAACTTT+GGG | 0.454122 | 5_2:+55214674 | Msa0776710:CDS |
| TTATGTTGGGAATCTGATCC+CGG | 0.462101 | 5_2:+55214712 | Msa0776710:CDS |
| AATAGTTACTTTCAGAGGTA+GGG | 0.468903 | 5_2:-55214274 | None:intergenic |
| AGAGAACTATCAACTTCCTA+TGG | 0.469114 | 5_2:+55213917 | Msa0776710:CDS |
| GCACTGGAGTATCTTCTTAA+GGG | 0.471379 | 5_2:+55211775 | Msa0776710:CDS |
| AGTTTATTGCTTGAAGAGGA+TGG | 0.473268 | 5_2:+55214130 | Msa0776710:CDS |
| ATCAATCTCGAAATTGGGGT+TGG | 0.474063 | 5_2:+55214384 | Msa0776710:CDS |
| AAAACTCACAAGAGATTACA+AGG | 0.479131 | 5_2:+55211849 | Msa0776710:CDS |
| ACCTTCCTCATCATGCCAGC+TGG | 0.479240 | 5_2:+55211955 | Msa0776710:CDS |
| TACTTTCAGAGGTAGGGGTA+TGG | 0.480631 | 5_2:-55214268 | None:intergenic |
| TCAATCTCGAAATTGGGGTT+GGG | 0.484525 | 5_2:+55214385 | Msa0776710:CDS |
| AAATAGTTACTTTCAGAGGT+AGG | 0.487249 | 5_2:-55214275 | None:intergenic |
| TACCATTTCACAGATACCTT+AGG | 0.494958 | 5_2:+55214561 | Msa0776710:CDS |
| TAAGCAATTTGAAGAAGTAA+TGG | 0.496648 | 5_2:-55214062 | None:intergenic |
| CTCACAAGAGATTACAAGGC+TGG | 0.498781 | 5_2:+55211853 | Msa0776710:CDS |
| GAGAAATTTCTTGGCATCCC+AGG | 0.502871 | 5_2:+55214037 | Msa0776710:CDS |
| GCTGGAAGAATTGATATAAG+AGG | 0.503169 | 5_2:+55211871 | Msa0776710:CDS |
| GCTCTCGTATCCCCACCTGT+TGG | 0.503395 | 5_2:-55214759 | None:intergenic |
| TATCTGTGAAATGGTACATC+GGG | 0.508199 | 5_2:-55214554 | None:intergenic |
| CAACATGCAATGTCTATTCA+GGG | 0.509631 | 5_2:+55214813 | Msa0776710:CDS |
| AGAGGATGGAGTACTTCTTA+GGG | 0.510147 | 5_2:+55214144 | Msa0776710:CDS |
| CAAGTTCCTTCACGTTCGAC+TGG | 0.511556 | 5_2:+55214888 | Msa0776710:CDS |
| GAACTTGTTCCATTAGGAGC+TGG | 0.517469 | 5_2:-55214872 | None:intergenic |
| TTGAAGAAGTAATGGTTCCT+GGG | 0.518604 | 5_2:-55214054 | None:intergenic |
| AGGGAGTGAAACTTGCATCT+AGG | 0.520021 | 5_2:+55211794 | Msa0776710:CDS |
| GCATTTGCCGAAAGCAAGAA+AGG | 0.520192 | 5_2:-55214312 | None:intergenic |
| GCTGGTTTGAACTCTTTCCA+TGG | 0.521060 | 5_2:+55211973 | Msa0776710:CDS |
| GAGTTAGTGGGATGCTTCAA+AGG | 0.526784 | 5_2:+55211905 | Msa0776710:CDS |
| TATAAAATAGTTACTTTCAG+AGG | 0.527278 | 5_2:-55214279 | None:intergenic |
| CTATTGCCATGAACATGCAC+TGG | 0.534789 | 5_2:+55211759 | Msa0776710:CDS |
| GGCATCCAATCAAGAGTTAG+TGG | 0.541734 | 5_2:+55211892 | Msa0776710:CDS |
| GTCACTCGCAAGGCCAACAT+AGG | 0.544047 | 5_2:+55214479 | Msa0776710:CDS |
| TCACTCGCAAGGCCAACATA+GGG | 0.545526 | 5_2:+55214480 | Msa0776710:CDS |
| TGGAAAGAGTTCAAACCAGC+TGG | 0.553560 | 5_2:-55211970 | None:intergenic |
| TCTCGTATCCCCACCTGTTG+GGG | 0.554196 | 5_2:-55214757 | None:intergenic |
| ATACACCGCCAAACTGAAAG+TGG | 0.554744 | 5_2:-55213980 | None:intergenic |
| ATAGTTACTTTCAGAGGTAG+GGG | 0.556646 | 5_2:-55214273 | None:intergenic |
| TGTTCATGGCAATAGTTTCG+AGG | 0.561483 | 5_2:-55211751 | None:intergenic |
| ATGATATCAAGCACATCCAT+AGG | 0.565205 | 5_2:-55213933 | None:intergenic |
| CAAGCTAAGTACCCCTATGT+TGG | 0.568982 | 5_2:-55214492 | None:intergenic |
| CATCACAATTAACCAACCTA+AGG | 0.573573 | 5_2:-55214577 | None:intergenic |
| TCAAAGCATAACAATTTCCC+GGG | 0.575564 | 5_2:-55214730 | None:intergenic |
| GTCTATCAATCTCGAAATTG+GGG | 0.577927 | 5_2:+55214380 | Msa0776710:CDS |
| GCGGTGTATGCAAGAATTGG+AGG | 0.586339 | 5_2:+55213994 | Msa0776710:CDS |
| GGGATGCTTCAAAGGCATCA+GGG | 0.590682 | 5_2:+55211913 | Msa0776710:CDS |
| TATGTTGGGAATCTGATCCC+GGG | 0.590753 | 5_2:+55214713 | Msa0776710:CDS |
| AATATATGTTGTCACTCGCA+AGG | 0.592550 | 5_2:+55214469 | Msa0776710:CDS |
| ATTTCACAGATACCTTAGGT+TGG | 0.593578 | 5_2:+55214565 | Msa0776710:CDS |
| GTTCATGGCAATAGTTTCGA+GGG | 0.594302 | 5_2:-55211750 | None:intergenic |
| TCAAACCAGCTGGCATGATG+AGG | 0.594872 | 5_2:-55211960 | None:intergenic |
| CTTTGAGCAACCCCAACAGG+TGG | 0.595743 | 5_2:+55214747 | Msa0776710:CDS |
| TGCTTTCGGCAAATGCTCTG+AGG | 0.601318 | 5_2:+55214319 | Msa0776710:CDS |
| ACCAGCTGGCATGATGAGGA+AGG | 0.612834 | 5_2:-55211956 | None:intergenic |
| GATAAAGGAAAATTATGGGA+GGG | 0.624971 | 5_2:+55214418 | Msa0776710:CDS |
| GTATCTGTGAAATGGTACAT+CGG | 0.626508 | 5_2:-55214555 | None:intergenic |
| GCATCCAATCAAGAGTTAGT+GGG | 0.632249 | 5_2:+55211893 | Msa0776710:CDS |
| TTTGAGCAACCCCAACAGGT+GGG | 0.636644 | 5_2:+55214748 | Msa0776710:CDS |
| CGATAAAGGAAAATTATGGG+AGG | 0.636894 | 5_2:+55214417 | Msa0776710:CDS |
| ACACATGTTGCGTCTTCTAG+CGG | 0.651365 | 5_2:+55214170 | Msa0776710:CDS |
| CACTCGCAAGGCCAACATAG+GGG | 0.657764 | 5_2:+55214481 | Msa0776710:CDS |
| TTGAGCAACCCCAACAGGTG+GGG | 0.661540 | 5_2:+55214749 | Msa0776710:CDS |
| AACATGCAATGTCTATTCAG+GGG | 0.666015 | 5_2:+55214814 | Msa0776710:CDS |
| CGGTGTATGCAAGAATTGGA+GGG | 0.680549 | 5_2:+55213995 | Msa0776710:CDS |
| ATTGATAGACATGCAAACAA+CGG | 0.699925 | 5_2:-55214367 | None:intergenic |
| AAAATGCCAGTCGAACGTGA+AGG | 0.703199 | 5_2:-55214894 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACAAAAATCTAAAATAATT+TGG | - | chr5_2:55212428-55212447 | None:intergenic | 10.0% |
| !!! | TTTTAAAAGAAAAAGAAAAA+GGG | - | chr5_2:55212922-55212941 | None:intergenic | 10.0% |
| !! | ATATATATATATATATGAGG+AGG | + | chr5_2:55212190-55212209 | Msa0776710:intron | 15.0% |
| !!! | CTTTTAAAAGAAAAAGAAAA+AGG | - | chr5_2:55212923-55212942 | None:intergenic | 15.0% |
| !! | AAATATCTATATTGTATTCA+TGG | + | chr5_2:55213316-55213335 | Msa0776710:intron | 15.0% |
| !! | AAAAAAAAAATGCTAATAAC+TGG | - | chr5_2:55213459-55213478 | None:intergenic | 15.0% |
| !!! | ATTAGCATTTTTTTTTTTTG+TGG | + | chr5_2:55213462-55213481 | Msa0776710:intron | 15.0% |
| !!! | TACATAGTTTTTAATTTCAT+TGG | + | chr5_2:55213624-55213643 | Msa0776710:intron | 15.0% |
| !!! | ACATAGTTTTTAATTTCATT+GGG | + | chr5_2:55213625-55213644 | Msa0776710:intron | 15.0% |
| !!! | ATAATATCTTGATAGTTTTC+TGG | + | chr5_2:55212008-55212027 | Msa0776710:intron | 20.0% |
| !! | ATATGTATGTATGTATGTAA+AGG | - | chr5_2:55212034-55212053 | None:intergenic | 20.0% |
| !! | CGTAAATGATATATATATGA+TGG | - | chr5_2:55212296-55212315 | None:intergenic | 20.0% |
| !! | TCATATATATATCATTTACG+TGG | + | chr5_2:55212296-55212315 | Msa0776710:intron | 20.0% |
| !! | AAATATTGTTCAATCTTTGT+TGG | + | chr5_2:55212636-55212655 | Msa0776710:intron | 20.0% |
| !!! | AAACTTTTCATGTATTGAAT+CGG | + | chr5_2:55212765-55212784 | Msa0776710:intron | 20.0% |
| !! | CTTTAGATTAAATGGATAAT+GGG | - | chr5_2:55212981-55213000 | None:intergenic | 20.0% |
| !! | TCTTTAGATTAAATGGATAA+TGG | - | chr5_2:55212982-55213001 | None:intergenic | 20.0% |
| !! | GTATATACATGTTTAAATTG+AGG | + | chr5_2:55213238-55213257 | Msa0776710:intron | 20.0% |
| !! | AATAAAATACTAGAAGAAGT+TGG | + | chr5_2:55213414-55213433 | Msa0776710:intron | 20.0% |
| !! | AGACTTAGACTAATAAAATT+AGG | + | chr5_2:55213560-55213579 | Msa0776710:intron | 20.0% |
| !! | GACTTAGACTAATAAAATTA+GGG | + | chr5_2:55213561-55213580 | Msa0776710:intron | 20.0% |
| !! | TAAAATCTTTATCAACTTGT+AGG | + | chr5_2:55213691-55213710 | Msa0776710:intron | 20.0% |
| !! | ATCACAACAATGAAAATATT+AGG | - | chr5_2:55213869-55213888 | None:intergenic | 20.0% |
| !! | AATTTATTGGAGAAATTTCT+TGG | + | chr5_2:55214028-55214047 | Msa0776710:CDS | 20.0% |
| !! | CTAACATAAGTGAATTATTA+TGG | - | chr5_2:55214217-55214236 | None:intergenic | 20.0% |
| !!! | ACTTCTTTTTTCTTGTAAAT+GGG | - | chr5_2:55214244-55214263 | None:intergenic | 20.0% |
| !!! | AACTTCTTTTTTCTTGTAAA+TGG | - | chr5_2:55214245-55214264 | None:intergenic | 20.0% |
| !!! | TATAAAATAGTTACTTTCAG+AGG | - | chr5_2:55214282-55214301 | None:intergenic | 20.0% |
| ! | GGTTGTAATATTATGTATCT+AGG | + | chr5_2:55212226-55212245 | Msa0776710:intron | 25.0% |
| ! | TTGAAATACTACAAGATTGA+TGG | - | chr5_2:55212398-55212417 | None:intergenic | 25.0% |
| ! | TGAATGATGAAAAATATGCA+CGG | + | chr5_2:55212458-55212477 | Msa0776710:intron | 25.0% |
| !! | TTTTCAAATTATTACCGTGT+CGG | - | chr5_2:55212495-55212514 | None:intergenic | 25.0% |
| ! | CTAATTGTGTAAAACATCAT+CGG | - | chr5_2:55212700-55212719 | None:intergenic | 25.0% |
| !! | TGTTTTACACAATTAGTTGA+TGG | + | chr5_2:55212704-55212723 | Msa0776710:intron | 25.0% |
| ! | AATGAAGAAGAAATCATCAT+AGG | + | chr5_2:55212825-55212844 | Msa0776710:intron | 25.0% |
| ! | AAATTGAACTGAATACAATC+AGG | - | chr5_2:55212951-55212970 | None:intergenic | 25.0% |
| ! | ATCCATTTAATCTAAAGAAC+AGG | + | chr5_2:55212984-55213003 | Msa0776710:intron | 25.0% |
| ! | TACCTGTTCTTTAGATTAAA+TGG | - | chr5_2:55212989-55213008 | None:intergenic | 25.0% |
| !!! | TGCCAAATATTTTGAAACTA+TGG | + | chr5_2:55213263-55213282 | Msa0776710:intron | 25.0% |
| ! | CACCATAGTTTCAAAATATT+TGG | - | chr5_2:55213268-55213287 | None:intergenic | 25.0% |
| ! | ATCTATATTGTATTCATGGA+CGG | + | chr5_2:55213320-55213339 | Msa0776710:intron | 25.0% |
| !! | ATTTTATTCTTATAGACACC+TGG | - | chr5_2:55213402-55213421 | None:intergenic | 25.0% |
| ! | AAAAATGCTAATAACTGGAA+CGG | - | chr5_2:55213454-55213473 | None:intergenic | 25.0% |
| !!! | AGCATTTTTTTTTTTTGTGG+TGG | + | chr5_2:55213465-55213484 | Msa0776710:intron | 25.0% |
| ! | TAGTTGCATGAATAGAAAAA+GGG | - | chr5_2:55213673-55213692 | None:intergenic | 25.0% |
| ! | TTAGTTGCATGAATAGAAAA+AGG | - | chr5_2:55213674-55213693 | None:intergenic | 25.0% |
| !! | TTTTCATTGTTGTGATACAA+AGG | + | chr5_2:55213873-55213892 | Msa0776710:intron | 25.0% |
| ! | TTTCATTGTTGTGATACAAA+GGG | + | chr5_2:55213874-55213893 | Msa0776710:intron | 25.0% |
| ! | TAAGCAATTTGAAGAAGTAA+TGG | - | chr5_2:55214065-55214084 | None:intergenic | 25.0% |
| !! | TCTTCAAGCAATAAACTTTT+TGG | - | chr5_2:55214127-55214146 | None:intergenic | 25.0% |
| ! | AAAAAGTTTATTGCTTGAAG+AGG | + | chr5_2:55214126-55214145 | Msa0776710:CDS | 25.0% |
| ! | TACTCGATAAAGGAAAATTA+TGG | + | chr5_2:55214413-55214432 | Msa0776710:CDS | 25.0% |
| ! | ACTCGATAAAGGAAAATTAT+GGG | + | chr5_2:55214414-55214433 | Msa0776710:CDS | 25.0% |
| ! | ACATTGCATTACTTTATGTT+GGG | + | chr5_2:55214699-55214718 | Msa0776710:CDS | 25.0% |
| AAAACTCACAAGAGATTACA+AGG | + | chr5_2:55211849-55211868 | Msa0776710:CDS | 30.0% | |
| ATTATGTGAATTACGTACCA+TGG | - | chr5_2:55211993-55212012 | None:intergenic | 30.0% | |
| TCTAGGAAAACGATATTGAT+TGG | + | chr5_2:55212243-55212262 | Msa0776710:intron | 30.0% | |
| TGTTGGAATATTGAGACATA+TGG | + | chr5_2:55212653-55212672 | Msa0776710:intron | 30.0% | |
| ! | ATCGGCTTAGTCTTTAAATT+AGG | - | chr5_2:55212682-55212701 | None:intergenic | 30.0% |
| AAACAGAATCACAACAGAAT+GGG | - | chr5_2:55213055-55213074 | None:intergenic | 30.0% | |
| CTGTTTGTAGAATAAACATG+AGG | + | chr5_2:55213154-55213173 | Msa0776710:intron | 30.0% | |
| AAGAAGCTTCAAGGTAAAAT+TGG | - | chr5_2:55213197-55213216 | None:intergenic | 30.0% | |
| !!! | ATTTTGAAACTATGGTGTCT+TGG | + | chr5_2:55213271-55213290 | Msa0776710:intron | 30.0% |
| TTTATGAGAATACCCATCAT+TGG | - | chr5_2:55213299-55213318 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTTTGTGGTGGC+AGG | + | chr5_2:55213469-55213488 | Msa0776710:intron | 30.0% |
| !!! | TTTTTTTTTTTGTGGTGGCA+GGG | + | chr5_2:55213470-55213489 | Msa0776710:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | chr5_2:55213509-55213528 | None:intergenic | 30.0% | |
| AATAGAAAAAGGGATGATCA+GGG | - | chr5_2:55213663-55213682 | None:intergenic | 30.0% | |
| TATCAGTTCGATAGCATAAA+TGG | + | chr5_2:55213717-55213736 | Msa0776710:intron | 30.0% | |
| AATAGAGCGAAATGATTGAA+GGG | - | chr5_2:55213763-55213782 | None:intergenic | 30.0% | |
| GGGTGTTTCATCAAATTTAT+TGG | + | chr5_2:55214015-55214034 | Msa0776710:CDS | 30.0% | |
| !! | AAGCAATAAACTTTTTGGTC+GGG | - | chr5_2:55214122-55214141 | None:intergenic | 30.0% |
| !! | CAAGCAATAAACTTTTTGGT+CGG | - | chr5_2:55214123-55214142 | None:intergenic | 30.0% |
| !! | TTCTAGCGGATATTTTATCA+TGG | + | chr5_2:55214184-55214203 | Msa0776710:CDS | 30.0% |
| ! | AATAGTTACTTTCAGAGGTA+GGG | - | chr5_2:55214277-55214296 | None:intergenic | 30.0% |
| ! | AAATAGTTACTTTCAGAGGT+AGG | - | chr5_2:55214278-55214297 | None:intergenic | 30.0% |
| ATTGATAGACATGCAAACAA+CGG | - | chr5_2:55214370-55214389 | None:intergenic | 30.0% | |
| ATGTCTATCAATCTCGAAAT+TGG | + | chr5_2:55214378-55214397 | Msa0776710:CDS | 30.0% | |
| TGTCTATCAATCTCGAAATT+GGG | + | chr5_2:55214379-55214398 | Msa0776710:CDS | 30.0% | |
| GATAAAGGAAAATTATGGGA+GGG | + | chr5_2:55214418-55214437 | Msa0776710:CDS | 30.0% | |
| !! | TTTTAGTGGTTGATTTAACG+TGG | + | chr5_2:55214606-55214625 | Msa0776710:CDS | 30.0% |
| TTTCAGTTCGACATAATTCA+TGG | - | chr5_2:55214669-55214688 | None:intergenic | 30.0% | |
| TTATGTCGAACTGAAAACTT+TGG | + | chr5_2:55214673-55214692 | Msa0776710:CDS | 30.0% | |
| TATGTCGAACTGAAAACTTT+GGG | + | chr5_2:55214674-55214693 | Msa0776710:CDS | 30.0% | |
| GACATTGCATTACTTTATGT+TGG | + | chr5_2:55214698-55214717 | Msa0776710:CDS | 30.0% | |
| GCTGGAAGAATTGATATAAG+AGG | + | chr5_2:55211871-55211890 | Msa0776710:CDS | 35.0% | |
| AGGCATCAGGGTTTATTATT+CGG | + | chr5_2:55211925-55211944 | Msa0776710:CDS | 35.0% | |
| TGAGGAGGAATCAAACTATA+CGG | + | chr5_2:55212205-55212224 | Msa0776710:intron | 35.0% | |
| TGATTGGTGTAACATTACAC+TGG | + | chr5_2:55212259-55212278 | Msa0776710:intron | 35.0% | |
| TACGAAGCAAGAACATTCAT+TGG | - | chr5_2:55212598-55212617 | None:intergenic | 35.0% | |
| ! | CTTTTCATGTATTGAATCGG+TGG | + | chr5_2:55212768-55212787 | Msa0776710:intron | 35.0% |
| AAAGGGAAATCCTAACATAG+TGG | - | chr5_2:55212905-55212924 | None:intergenic | 35.0% | |
| AGAGACATTCCATCATTTCA+TGG | - | chr5_2:55213012-55213031 | None:intergenic | 35.0% | |
| GAAACAGAATCACAACAGAA+TGG | - | chr5_2:55213056-55213075 | None:intergenic | 35.0% | |
| ! | GTATGGTGAGTTGGAAAAAA+AGG | - | chr5_2:55213078-55213097 | None:intergenic | 35.0% |
| AAATGAGTAGTATGGTGAGT+TGG | - | chr5_2:55213087-55213106 | None:intergenic | 35.0% | |
| GATGGGATAAATGAGTAGTA+TGG | - | chr5_2:55213095-55213114 | None:intergenic | 35.0% | |
| GGGAACATGAGAATGATAAA+TGG | - | chr5_2:55213126-55213145 | None:intergenic | 35.0% | |
| ATTCTACAAACAGATAGCGA+GGG | - | chr5_2:55213147-55213166 | None:intergenic | 35.0% | |
| TATTCTACAAACAGATAGCG+AGG | - | chr5_2:55213148-55213167 | None:intergenic | 35.0% | |
| TGTAGAATAAACATGAGGTG+TGG | + | chr5_2:55213159-55213178 | Msa0776710:intron | 35.0% | |
| ! | AGGTAAAATTGGTGGATGAT+AGG | - | chr5_2:55213186-55213205 | None:intergenic | 35.0% |
| AAGCTTCAAGGTAAAATTGG+TGG | - | chr5_2:55213194-55213213 | None:intergenic | 35.0% | |
| AAACACTTGAAGAAGCTTCA+AGG | - | chr5_2:55213206-55213225 | None:intergenic | 35.0% | |
| TATATTGTATTCATGGACGG+AGG | + | chr5_2:55213323-55213342 | Msa0776710:intron | 35.0% | |
| CATAATATATGCAAGGTCAG+GGG | - | chr5_2:55213502-55213521 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCA+GGG | - | chr5_2:55213503-55213522 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+AGG | - | chr5_2:55213504-55213523 | None:intergenic | 35.0% | |
| GAATAGAAAAAGGGATGATC+AGG | - | chr5_2:55213664-55213683 | None:intergenic | 35.0% | |
| CAATAGAGCGAAATGATTGA+AGG | - | chr5_2:55213764-55213783 | None:intergenic | 35.0% | |
| AGAGAACTATCAACTTCCTA+TGG | + | chr5_2:55213917-55213936 | Msa0776710:CDS | 35.0% | |
| ATGATATCAAGCACATCCAT+AGG | - | chr5_2:55213936-55213955 | None:intergenic | 35.0% | |
| TTGAAGAAGTAATGGTTCCT+GGG | - | chr5_2:55214057-55214076 | None:intergenic | 35.0% | |
| TTTGAAGAAGTAATGGTTCC+TGG | - | chr5_2:55214058-55214077 | None:intergenic | 35.0% | |
| !! | ATAAACTTTTTGGTCGGGTA+TGG | - | chr5_2:55214117-55214136 | None:intergenic | 35.0% |
| AGTTTATTGCTTGAAGAGGA+TGG | + | chr5_2:55214130-55214149 | Msa0776710:CDS | 35.0% | |
| ! | ATAGTTACTTTCAGAGGTAG+GGG | - | chr5_2:55214276-55214295 | None:intergenic | 35.0% |
| !! | ATGCTCTGAGGAATTTATCT+TGG | + | chr5_2:55214331-55214350 | Msa0776710:CDS | 35.0% |
| GTCTATCAATCTCGAAATTG+GGG | + | chr5_2:55214380-55214399 | Msa0776710:CDS | 35.0% | |
| CGATAAAGGAAAATTATGGG+AGG | + | chr5_2:55214417-55214436 | Msa0776710:CDS | 35.0% | |
| AATATATGTTGTCACTCGCA+AGG | + | chr5_2:55214469-55214488 | Msa0776710:CDS | 35.0% | |
| TATCTGTGAAATGGTACATC+GGG | - | chr5_2:55214557-55214576 | None:intergenic | 35.0% | |
| GTATCTGTGAAATGGTACAT+CGG | - | chr5_2:55214558-55214577 | None:intergenic | 35.0% | |
| TACCATTTCACAGATACCTT+AGG | + | chr5_2:55214561-55214580 | Msa0776710:CDS | 35.0% | |
| ! | AACCTAAGGTATCTGTGAAA+TGG | - | chr5_2:55214566-55214585 | None:intergenic | 35.0% |
| ATTTCACAGATACCTTAGGT+TGG | + | chr5_2:55214565-55214584 | Msa0776710:CDS | 35.0% | |
| CATCACAATTAACCAACCTA+AGG | - | chr5_2:55214580-55214599 | None:intergenic | 35.0% | |
| ! | TTGTGATGAGCAACTTTTAG+TGG | + | chr5_2:55214592-55214611 | Msa0776710:CDS | 35.0% |
| TCAAAGCATAACAATTTCCC+GGG | - | chr5_2:55214733-55214752 | None:intergenic | 35.0% | |
| CTCAAAGCATAACAATTTCC+CGG | - | chr5_2:55214734-55214753 | None:intergenic | 35.0% | |
| ACAACATGCAATGTCTATTC+AGG | + | chr5_2:55214812-55214831 | Msa0776710:CDS | 35.0% | |
| CAACATGCAATGTCTATTCA+GGG | + | chr5_2:55214813-55214832 | Msa0776710:CDS | 35.0% | |
| AACATGCAATGTCTATTCAG+GGG | + | chr5_2:55214814-55214833 | Msa0776710:CDS | 35.0% | |
| GTTCATGGCAATAGTTTCGA+GGG | - | chr5_2:55211753-55211772 | None:intergenic | 40.0% | |
| TGTTCATGGCAATAGTTTCG+AGG | - | chr5_2:55211754-55211773 | None:intergenic | 40.0% | |
| ! | TGCACTGGAGTATCTTCTTA+AGG | + | chr5_2:55211774-55211793 | Msa0776710:CDS | 40.0% |
| ! | GCACTGGAGTATCTTCTTAA+GGG | + | chr5_2:55211775-55211794 | Msa0776710:CDS | 40.0% |
| GCATCCAATCAAGAGTTAGT+GGG | + | chr5_2:55211893-55211912 | Msa0776710:CDS | 40.0% | |
| GGCTACAACAAGATTAACTG+TGG | + | chr5_2:55212354-55212373 | Msa0776710:intron | 40.0% | |
| ATCGGTGGAGTCTATATCTT+TGG | + | chr5_2:55212783-55212802 | Msa0776710:intron | 40.0% | |
| TACCATGCAACCACTATGTT+AGG | + | chr5_2:55212892-55212911 | Msa0776710:intron | 40.0% | |
| ATCCTAACATAGTGGTTGCA+TGG | - | chr5_2:55212897-55212916 | None:intergenic | 40.0% | |
| GAACAGGTACCATGAAATGA+TGG | + | chr5_2:55213000-55213019 | Msa0776710:intron | 40.0% | |
| TACTCATTTATCCCATCCTC+TGG | + | chr5_2:55213098-55213117 | Msa0776710:intron | 40.0% | |
| AGAATGATAAATGGCACCAG+AGG | - | chr5_2:55213117-55213136 | None:intergenic | 40.0% | |
| TTCTACAAACAGATAGCGAG+GGG | - | chr5_2:55213146-55213165 | None:intergenic | 40.0% | |
| ! | AATTTTCCCCAACTTCTACC+AGG | + | chr5_2:55213381-55213400 | Msa0776710:intron | 40.0% |
| ATAGACACCTGGTAGAAGTT+GGG | - | chr5_2:55213391-55213410 | None:intergenic | 40.0% | |
| TATAGACACCTGGTAGAAGT+TGG | - | chr5_2:55213392-55213411 | None:intergenic | 40.0% | |
| CAAAGGGAAAAAAGCGAAGA+AGG | + | chr5_2:55213890-55213909 | Msa0776710:intron | 40.0% | |
| TTTGACGACCACTTTCAGTT+TGG | + | chr5_2:55213972-55213991 | Msa0776710:CDS | 40.0% | |
| TTGGTCGGGTATGGTAATAA+AGG | - | chr5_2:55214108-55214127 | None:intergenic | 40.0% | |
| ! | AAGAGGATGGAGTACTTCTT+AGG | + | chr5_2:55214143-55214162 | Msa0776710:CDS | 40.0% |
| ! | AGAGGATGGAGTACTTCTTA+GGG | + | chr5_2:55214144-55214163 | Msa0776710:CDS | 40.0% |
| ! | CTCTGAGGAATTTATCTTGG+TGG | + | chr5_2:55214334-55214353 | Msa0776710:CDS | 40.0% |
| ATCAATCTCGAAATTGGGGT+TGG | + | chr5_2:55214384-55214403 | Msa0776710:CDS | 40.0% | |
| TCAATCTCGAAATTGGGGTT+GGG | + | chr5_2:55214385-55214404 | Msa0776710:CDS | 40.0% | |
| TTGGGCTACTTACTCGATAA+AGG | + | chr5_2:55214403-55214422 | Msa0776710:CDS | 40.0% | |
| TTATGTTGGGAATCTGATCC+CGG | + | chr5_2:55214712-55214731 | Msa0776710:CDS | 40.0% | |
| ATTACACTTCCAGCTCCTAA+TGG | + | chr5_2:55214863-55214882 | Msa0776710:CDS | 40.0% | |
| ! | GTGAAGGAACTTGTTCCATT+AGG | - | chr5_2:55214881-55214900 | None:intergenic | 40.0% |
| CTATTGCCATGAACATGCAC+TGG | + | chr5_2:55211759-55211778 | Msa0776710:CDS | 45.0% | |
| GATACTCCAGTGCATGTTCA+TGG | - | chr5_2:55211768-55211787 | None:intergenic | 45.0% | |
| AGGGAGTGAAACTTGCATCT+AGG | + | chr5_2:55211794-55211813 | Msa0776710:CDS | 45.0% | |
| CTCACAAGAGATTACAAGGC+TGG | + | chr5_2:55211853-55211872 | Msa0776710:CDS | 45.0% | |
| GGCATCCAATCAAGAGTTAG+TGG | + | chr5_2:55211892-55211911 | Msa0776710:CDS | 45.0% | |
| GCATCCCACTAACTCTTGAT+TGG | - | chr5_2:55211900-55211919 | None:intergenic | 45.0% | |
| GAGTTAGTGGGATGCTTCAA+AGG | + | chr5_2:55211905-55211924 | Msa0776710:CDS | 45.0% | |
| TGGAAAGAGTTCAAACCAGC+TGG | - | chr5_2:55211973-55211992 | None:intergenic | 45.0% | |
| !! | GCTGGTTTGAACTCTTTCCA+TGG | + | chr5_2:55211973-55211992 | Msa0776710:CDS | 45.0% |
| GAATCACAACAGAATGGGTG+TGG | - | chr5_2:55213050-55213069 | None:intergenic | 45.0% | |
| GATAAATGGCACCAGAGGAT+GGG | - | chr5_2:55213112-55213131 | None:intergenic | 45.0% | |
| TGATAAATGGCACCAGAGGA+TGG | - | chr5_2:55213113-55213132 | None:intergenic | 45.0% | |
| TGGTGTCTTGGATCCAATGA+TGG | + | chr5_2:55213283-55213302 | Msa0776710:intron | 45.0% | |
| GGTGTCTTGGATCCAATGAT+GGG | + | chr5_2:55213284-55213303 | Msa0776710:intron | 45.0% | |
| ATTGTATTCATGGACGGAGG+TGG | + | chr5_2:55213326-55213345 | Msa0776710:intron | 45.0% | |
| TTGTATTCATGGACGGAGGT+GGG | + | chr5_2:55213327-55213346 | Msa0776710:intron | 45.0% | |
| TAGACACCTGGTAGAAGTTG+GGG | - | chr5_2:55213390-55213409 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr5_2:55213531-55213550 | None:intergenic | 45.0% |
| GTAAGTGAGCTTAGCTCAGT+TGG | - | chr5_2:55213536-55213555 | None:intergenic | 45.0% | |
| ATACACCGCCAAACTGAAAG+TGG | - | chr5_2:55213983-55214002 | None:intergenic | 45.0% | |
| TTGGCGGTGTATGCAAGAAT+TGG | + | chr5_2:55213991-55214010 | Msa0776710:CDS | 45.0% | |
| CGGTGTATGCAAGAATTGGA+GGG | + | chr5_2:55213995-55214014 | Msa0776710:CDS | 45.0% | |
| GAGAAATTTCTTGGCATCCC+AGG | + | chr5_2:55214037-55214056 | Msa0776710:CDS | 45.0% | |
| ACACATGTTGCGTCTTCTAG+CGG | + | chr5_2:55214170-55214189 | Msa0776710:CDS | 45.0% | |
| TACTTTCAGAGGTAGGGGTA+TGG | - | chr5_2:55214271-55214290 | None:intergenic | 45.0% | |
| GATCGTGCCTTTCTTGCTTT+CGG | + | chr5_2:55214305-55214324 | Msa0776710:CDS | 45.0% | |
| GCATTTGCCGAAAGCAAGAA+AGG | - | chr5_2:55214315-55214334 | None:intergenic | 45.0% | |
| CAAGCTAAGTACCCCTATGT+TGG | - | chr5_2:55214495-55214514 | None:intergenic | 45.0% | |
| TATGTTGGGAATCTGATCCC+GGG | + | chr5_2:55214713-55214732 | Msa0776710:CDS | 45.0% | |
| ! | GAACTTGTTCCATTAGGAGC+TGG | - | chr5_2:55214875-55214894 | None:intergenic | 45.0% |
| AAAATGCCAGTCGAACGTGA+AGG | - | chr5_2:55214897-55214916 | None:intergenic | 45.0% | |
| !! | TATATATATATATATATATG+AGG | + | chr5_2:55212187-55212206 | Msa0776710:intron | 5.0% |
| !!! | AAATATAAAATCATTTTATT+TGG | + | chr5_2:55212333-55212352 | Msa0776710:intron | 5.0% |
| !! | TGGGATGCTTCAAAGGCATC+AGG | + | chr5_2:55211912-55211931 | Msa0776710:CDS | 50.0% |
| !! | GGGATGCTTCAAAGGCATCA+GGG | + | chr5_2:55211913-55211932 | Msa0776710:CDS | 50.0% |
| TCAAACCAGCTGGCATGATG+AGG | - | chr5_2:55211963-55211982 | None:intergenic | 50.0% | |
| ACGGAGGTGGGCATAAAGTT+TGG | + | chr5_2:55213339-55213358 | Msa0776710:intron | 50.0% | |
| ! | GGTGGGCATAAAGTTTGGTG+TGG | + | chr5_2:55213344-55213363 | Msa0776710:intron | 50.0% |
| GTGAGCTTAGCTCAGTTGGT+AGG | - | chr5_2:55213532-55213551 | None:intergenic | 50.0% | |
| GACGACCACTTTCAGTTTGG+CGG | + | chr5_2:55213975-55213994 | Msa0776710:CDS | 50.0% | |
| GCGGTGTATGCAAGAATTGG+AGG | + | chr5_2:55213994-55214013 | Msa0776710:CDS | 50.0% | |
| TGCTTTCGGCAAATGCTCTG+AGG | + | chr5_2:55214319-55214338 | Msa0776710:CDS | 50.0% | |
| !! | TGGGAGGGTTGTTGACTTTG+CGG | + | chr5_2:55214433-55214452 | Msa0776710:CDS | 50.0% |
| TCACTCGCAAGGCCAACATA+GGG | + | chr5_2:55214480-55214499 | Msa0776710:CDS | 50.0% | |
| ! | ATGCTTTGAGCAACCCCAAC+AGG | + | chr5_2:55214744-55214763 | Msa0776710:CDS | 50.0% |
| TTTGAGCAACCCCAACAGGT+GGG | + | chr5_2:55214748-55214767 | Msa0776710:CDS | 50.0% | |
| CAAGTTCCTTCACGTTCGAC+TGG | + | chr5_2:55214888-55214907 | Msa0776710:CDS | 50.0% | |
| ACCTTCCTCATCATGCCAGC+TGG | + | chr5_2:55211955-55211974 | Msa0776710:CDS | 55.0% | |
| ACCAGCTGGCATGATGAGGA+AGG | - | chr5_2:55211959-55211978 | None:intergenic | 55.0% | |
| GTCACTCGCAAGGCCAACAT+AGG | + | chr5_2:55214479-55214498 | Msa0776710:CDS | 55.0% | |
| CACTCGCAAGGCCAACATAG+GGG | + | chr5_2:55214481-55214500 | Msa0776710:CDS | 55.0% | |
| CTTTGAGCAACCCCAACAGG+TGG | + | chr5_2:55214747-55214766 | Msa0776710:CDS | 55.0% | |
| TTGAGCAACCCCAACAGGTG+GGG | + | chr5_2:55214749-55214768 | Msa0776710:CDS | 55.0% | |
| TCTCGTATCCCCACCTGTTG+GGG | - | chr5_2:55214760-55214779 | None:intergenic | 55.0% | |
| CTCTCGTATCCCCACCTGTT+GGG | - | chr5_2:55214761-55214780 | None:intergenic | 55.0% | |
| CGGACACAGACATGCCGACA+CGG | + | chr5_2:55212478-55212497 | Msa0776710:intron | 60.0% | |
| GCTCTCGTATCCCCACCTGT+TGG | - | chr5_2:55214762-55214781 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 55211742 | 55214958 | 55211742 | ID=Msa0776710;Name=Msa0776710 |
| chr5_2 | mRNA | 55211742 | 55214958 | 55211742 | ID=Msa0776710-mRNA-1;Parent=Msa0776710;Name=Msa0776710-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|438 |
| chr5_2 | exon | 55211742 | 55211994 | 55211742 | ID=Msa0776710-mRNA-1:exon:16352;Parent=Msa0776710-mRNA-1 |
| chr5_2 | exon | 55213895 | 55214958 | 55213895 | ID=Msa0776710-mRNA-1:exon:16353;Parent=Msa0776710-mRNA-1 |
| chr5_2 | CDS | 55211742 | 55211994 | 55211742 | ID=Msa0776710-mRNA-1:cds;Parent=Msa0776710-mRNA-1 |
| chr5_2 | CDS | 55213895 | 55214958 | 55213895 | ID=Msa0776710-mRNA-1:cds;Parent=Msa0776710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
