Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777510 | PNX73184.1 | 86.275 | 102 | 14 | 0 | 33 | 134 | 1 | 102 | 2.02e-56 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777510 | sp|Q9SZL8|FRS5_ARATH | 41.071 | 112 | 60 | 2 | 26 | 132 | 70 | 180 | 7.89e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777510 | A0A2K3L3T3 | 86.275 | 102 | 14 | 0 | 33 | 134 | 1 | 102 | 9.63e-57 | 185 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0777510 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777510 | MtrunA17_Chr6g0458391 | 46.617 | 133 | 65 | 4 | 11 | 139 | 205 | 335 | 4.96e-31 | 116 |
| Msa0777510 | MtrunA17_Chr6g0458391 | 47.664 | 107 | 54 | 2 | 27 | 132 | 89 | 194 | 5.12e-28 | 108 |
| Msa0777510 | MtrunA17_Chr1g0203721 | 46.154 | 104 | 53 | 2 | 31 | 132 | 65 | 167 | 1.29e-25 | 101 |
| Msa0777510 | MtrunA17_Chr7g0233911 | 41.509 | 106 | 58 | 2 | 29 | 131 | 34 | 138 | 1.38e-19 | 81.3 |
| Msa0777510 | MtrunA17_Chr3g0082121 | 44.545 | 110 | 57 | 3 | 26 | 132 | 40 | 148 | 1.40e-19 | 84.0 |
| Msa0777510 | MtrunA17_Chr4g0033611 | 40.708 | 113 | 63 | 3 | 29 | 139 | 76 | 186 | 1.33e-18 | 79.3 |
| Msa0777510 | MtrunA17_Chr7g0258861 | 41.379 | 116 | 63 | 2 | 23 | 135 | 4 | 117 | 1.41e-17 | 77.4 |
| Msa0777510 | MtrunA17_Chr2g0329421 | 37.391 | 115 | 68 | 3 | 29 | 141 | 27 | 139 | 6.56e-17 | 73.9 |
| Msa0777510 | MtrunA17_Chr2g0287061 | 38.679 | 106 | 49 | 3 | 27 | 130 | 181 | 272 | 6.90e-16 | 73.6 |
| Msa0777510 | MtrunA17_Chr2g0287061 | 38.614 | 101 | 50 | 3 | 29 | 129 | 29 | 117 | 2.31e-12 | 63.2 |
| Msa0777510 | MtrunA17_Chr5g0401121 | 42.991 | 107 | 53 | 4 | 28 | 129 | 55 | 158 | 2.74e-15 | 68.9 |
| Msa0777510 | MtrunA17_Chr5g0448761 | 39.823 | 113 | 61 | 3 | 26 | 132 | 57 | 168 | 3.62e-15 | 71.2 |
| Msa0777510 | MtrunA17_Chr2g0329361 | 31.452 | 124 | 71 | 4 | 18 | 132 | 49 | 167 | 1.49e-13 | 65.5 |
| Msa0777510 | MtrunA17_Chr7g0238821 | 36.364 | 110 | 64 | 3 | 33 | 139 | 1 | 107 | 2.35e-13 | 62.4 |
| Msa0777510 | MtrunA17_Chr2g0324011 | 36.607 | 112 | 65 | 3 | 26 | 134 | 7 | 115 | 3.34e-13 | 65.9 |
| Msa0777510 | MtrunA17_Chr3g0078041 | 37.607 | 117 | 68 | 3 | 29 | 141 | 50 | 165 | 3.44e-13 | 64.3 |
| Msa0777510 | MtrunA17_Chr5g0440451 | 39.423 | 104 | 51 | 3 | 29 | 132 | 43 | 134 | 9.05e-13 | 64.3 |
| Msa0777510 | MtrunA17_Chr2g0276841 | 35.714 | 112 | 64 | 4 | 28 | 132 | 69 | 179 | 2.43e-12 | 63.2 |
| Msa0777510 | MtrunA17_Chr2g0291591 | 33.613 | 119 | 71 | 4 | 19 | 135 | 54 | 166 | 1.08e-11 | 61.2 |
| Msa0777510 | MtrunA17_Chr2g0287651 | 37.736 | 106 | 59 | 3 | 33 | 133 | 79 | 182 | 3.47e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777510 | AT3G59470.3 | 40.566 | 106 | 61 | 2 | 29 | 133 | 70 | 174 | 1.37e-18 | 79.3 |
| Msa0777510 | AT3G59470.1 | 40.566 | 106 | 61 | 2 | 29 | 133 | 70 | 174 | 1.37e-18 | 79.3 |
| Msa0777510 | AT3G59470.2 | 40.566 | 106 | 61 | 2 | 29 | 133 | 82 | 186 | 1.58e-18 | 79.7 |
| Msa0777510 | AT4G38180.1 | 41.071 | 112 | 60 | 2 | 26 | 132 | 70 | 180 | 8.03e-18 | 79.3 |
| Msa0777510 | AT3G07500.1 | 36.364 | 132 | 77 | 4 | 9 | 135 | 10 | 139 | 1.02e-17 | 76.6 |
| Msa0777510 | AT5G18960.2 | 40.196 | 102 | 49 | 2 | 29 | 130 | 43 | 132 | 1.34e-17 | 78.6 |
| Msa0777510 | AT5G18960.2 | 35.644 | 101 | 53 | 2 | 29 | 129 | 211 | 299 | 8.15e-14 | 67.8 |
| Msa0777510 | AT5G18960.1 | 40.196 | 102 | 49 | 2 | 29 | 130 | 43 | 132 | 1.34e-17 | 78.6 |
| Msa0777510 | AT5G18960.1 | 35.644 | 101 | 53 | 2 | 29 | 129 | 211 | 299 | 8.15e-14 | 67.8 |
| Msa0777510 | AT3G06250.2 | 35.345 | 116 | 63 | 2 | 15 | 130 | 14 | 117 | 2.02e-16 | 75.5 |
| Msa0777510 | AT3G06250.2 | 34.545 | 110 | 60 | 2 | 29 | 138 | 190 | 287 | 1.78e-14 | 69.7 |
| Msa0777510 | AT3G06250.1 | 35.345 | 116 | 63 | 2 | 15 | 130 | 14 | 117 | 2.02e-16 | 75.5 |
| Msa0777510 | AT3G06250.1 | 34.545 | 110 | 60 | 2 | 29 | 138 | 190 | 287 | 1.78e-14 | 69.7 |
| Msa0777510 | AT3G06250.3 | 35.345 | 116 | 63 | 2 | 15 | 130 | 14 | 117 | 2.02e-16 | 75.5 |
| Msa0777510 | AT3G06250.3 | 34.545 | 110 | 60 | 2 | 29 | 138 | 190 | 287 | 1.78e-14 | 69.7 |
| Msa0777510 | AT4G12850.4 | 36.634 | 101 | 62 | 2 | 29 | 129 | 11 | 109 | 8.74e-14 | 64.7 |
| Msa0777510 | AT4G12850.2 | 36.634 | 101 | 62 | 2 | 29 | 129 | 11 | 109 | 1.71e-13 | 63.9 |
| Msa0777510 | AT4G12850.1 | 36.634 | 101 | 62 | 2 | 29 | 129 | 11 | 109 | 3.54e-13 | 63.9 |
| Msa0777510 | AT1G10240.2 | 35.714 | 112 | 64 | 4 | 28 | 132 | 47 | 157 | 5.45e-13 | 65.5 |
| Msa0777510 | AT1G10240.1 | 35.714 | 112 | 64 | 4 | 28 | 132 | 47 | 157 | 5.45e-13 | 65.5 |
Find 47 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATATATGTTGGCTTTGT+TGG | 0.269393 | 5_2:+56498112 | Msa0777510:CDS |
| GCTGCTTGTCTGTCTGTCTT+TGG | 0.285318 | 5_2:-56501460 | None:intergenic |
| CTTTCTTTGCTCATTTGCTT+TGG | 0.295862 | 5_2:-56501517 | None:intergenic |
| ATGTTAGGAGAGGGAGTAAT+TGG | 0.313377 | 5_2:+56501303 | Msa0777510:CDS |
| GCCTTTAGTAGTGTGATTAG+TGG | 0.325466 | 5_2:-56501607 | None:intergenic |
| GCAGGTCCTGTTGACATGTT+AGG | 0.331205 | 5_2:+56501288 | Msa0777510:intron |
| CATCATCTTTGATCCTCTTA+AGG | 0.362188 | 5_2:-56498222 | None:intergenic |
| CATTTGCTTTGGTGCGGCTC+AGG | 0.371547 | 5_2:-56501506 | None:intergenic |
| TCAGACTCCATGCCAACATA+TGG | 0.385060 | 5_2:-56498061 | None:intergenic |
| ATATGGGATTATATCTTCTT+CGG | 0.393186 | 5_2:-56498044 | None:intergenic |
| CCCTCTCCTAACATGTCAAC+AGG | 0.409900 | 5_2:-56501294 | None:intergenic |
| TTGTCTGTCTGTCTTTGGTT+TGG | 0.418019 | 5_2:-56501455 | None:intergenic |
| ACAACTGAGGGTTGTGGAAA+AGG | 0.441660 | 5_2:+56501384 | Msa0777510:three_prime_UTR |
| TCTCGCAAAGATATCAGAAC+TGG | 0.446461 | 5_2:+56498256 | Msa0777510:CDS |
| TTAAAAGATCGATGCACAAC+TGG | 0.479452 | 5_2:+56501345 | Msa0777510:three_prime_UTR |
| GACCCGGGTCGATTCTGAAA+TGG | 0.483406 | 5_2:+56501542 | Msa0777510:three_prime_UTR |
| GAAGCACAGACACTGATAAT+CGG | 0.489978 | 5_2:-56497826 | None:intergenic |
| ATGAGCAAAGAAAGCTGACC+CGG | 0.499071 | 5_2:+56501526 | Msa0777510:three_prime_UTR |
| AGCACATGTTGTCATCAGTC+GGG | 0.504116 | 5_2:+56498285 | Msa0777510:CDS |
| AAATCTATATGCGTGATCTT+CGG | 0.504923 | 5_2:-56498086 | None:intergenic |
| GTAATTTATGCTTACTTCTG+GGG | 0.507260 | 5_2:-56498369 | None:intergenic |
| TAGCACATGTTGTCATCAGT+CGG | 0.513131 | 5_2:+56498284 | Msa0777510:CDS |
| ACCACTAATCACACTACTAA+AGG | 0.519513 | 5_2:+56501606 | Msa0777510:three_prime_UTR |
| CAGACTCCATGCCAACATAT+GGG | 0.529089 | 5_2:-56498060 | None:intergenic |
| AGGTAATCACTCCCACCAGC+AGG | 0.550348 | 5_2:+56501404 | Msa0777510:three_prime_UTR |
| AACATTGTCAAGGATCCTGC+TGG | 0.563595 | 5_2:-56501419 | None:intergenic |
| GAAGATATAATCCCATATGT+TGG | 0.567404 | 5_2:+56498049 | Msa0777510:CDS |
| TAATTTATGCTTACTTCTGG+GGG | 0.572803 | 5_2:-56498368 | None:intergenic |
| GAGAAACAACAAACTTCCAC+AGG | 0.586569 | 5_2:+56501574 | Msa0777510:three_prime_UTR |
| TATAATCCCATATGTTGGCA+TGG | 0.590560 | 5_2:+56498054 | Msa0777510:CDS |
| ATTGTCAAGGATCCTGCTGG+TGG | 0.593512 | 5_2:-56501416 | None:intergenic |
| TTTGCTCATTTGCTTTGGTG+CGG | 0.594414 | 5_2:-56501512 | None:intergenic |
| GTCTAACTCGTTACAACTGA+GGG | 0.598829 | 5_2:+56501372 | Msa0777510:three_prime_UTR |
| TCCTGTTGACATGTTAGGAG+AGG | 0.604105 | 5_2:+56501293 | Msa0777510:CDS |
| CCTGTTGACATGTTAGGAGA+GGG | 0.604936 | 5_2:+56501294 | Msa0777510:CDS |
| GAGGGAGTAATTGGTTCATG+AGG | 0.610816 | 5_2:+56501312 | Msa0777510:CDS |
| CTCGTTACAACTGAGGGTTG+TGG | 0.611492 | 5_2:+56501378 | Msa0777510:three_prime_UTR |
| TCGCCATTTCAGAATCGACC+CGG | 0.615233 | 5_2:-56501545 | None:intergenic |
| TAGTGGTTCTCTCTAACCTG+TGG | 0.621125 | 5_2:-56501590 | None:intergenic |
| CGCCATTTCAGAATCGACCC+GGG | 0.633035 | 5_2:-56501544 | None:intergenic |
| CAGGATCCTTGACAATGTTG+TGG | 0.637902 | 5_2:+56501423 | Msa0777510:three_prime_UTR |
| TTGTCAAGGATCCTGCTGGT+GGG | 0.646205 | 5_2:-56501415 | None:intergenic |
| AGATCGATGCACAACTGGAG+CGG | 0.648949 | 5_2:+56501350 | Msa0777510:three_prime_UTR |
| TGAGCAAAGAAAGCTGACCC+GGG | 0.649667 | 5_2:+56501527 | Msa0777510:three_prime_UTR |
| TATGTACCACAACATTGTCA+AGG | 0.650188 | 5_2:-56501429 | None:intergenic |
| GTCATCAGTCGGGAATCAAG+TGG | 0.654672 | 5_2:+56498295 | Msa0777510:CDS |
| GGTCTAACTCGTTACAACTG+AGG | 0.684881 | 5_2:+56501371 | Msa0777510:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTATAATATATATGT+TGG | + | chr5_2:56498103-56498122 | Msa0777510:CDS | 10.0% |
| !! | AAAATGAAACAATAATTAAA+AGG | - | chr5_2:56499793-56499812 | None:intergenic | 10.0% |
| !!! | TAAACTCAAAAATCAATTTT+TGG | - | chr5_2:56498452-56498471 | None:intergenic | 15.0% |
| !!! | GTTTTAGATTATGTTTATTT+TGG | + | chr5_2:56498692-56498711 | Msa0777510:intron | 15.0% |
| !!! | ATCAAATAACAAACATTTTC+TGG | + | chr5_2:56498655-56498674 | Msa0777510:intron | 20.0% |
| !! | AAAAGAATTTGATCTCTTAA+AGG | - | chr5_2:56499029-56499048 | None:intergenic | 20.0% |
| !!! | AAAAATGAGCTTTAGTATTA+GGG | + | chr5_2:56499179-56499198 | Msa0777510:intron | 20.0% |
| !!! | ACATCTTTTGATAAAATCAT+TGG | + | chr5_2:56499891-56499910 | Msa0777510:intron | 20.0% |
| !! | CAACTAATTGTTTAAAAGAA+AGG | + | chr5_2:56500233-56500252 | Msa0777510:intron | 20.0% |
| !!! | GTTTCATTTTTTTTTTCCAT+TGG | + | chr5_2:56500419-56500438 | Msa0777510:intron | 20.0% |
| !!! | TGATAATGAAATTCTTTTCT+AGG | + | chr5_2:56500832-56500851 | Msa0777510:intron | 20.0% |
| !!! | TGAAATTATTTTACCTAGAA+TGG | + | chr5_2:56501195-56501214 | Msa0777510:intron | 20.0% |
| !! | AATGTTTTGTGTTAAGAAGT+TGG | + | chr5_2:56497878-56497897 | Msa0777510:intron | 25.0% |
| !! | ATGTTTTGTGTTAAGAAGTT+GGG | + | chr5_2:56497879-56497898 | Msa0777510:intron | 25.0% |
| !! | TTTTCTTATTCACAGTGAAA+TGG | + | chr5_2:56497996-56498015 | Msa0777510:intron | 25.0% |
| ! | ATATGGGATTATATCTTCTT+CGG | - | chr5_2:56498047-56498066 | None:intergenic | 25.0% |
| !!! | AATATATATGTTGGCTTTGT+TGG | + | chr5_2:56498112-56498131 | Msa0777510:CDS | 25.0% |
| !!! | GTTTTAGCATTAGAAAAGAT+TGG | + | chr5_2:56498134-56498153 | Msa0777510:CDS | 25.0% |
| !!! | AAATTCGTGTGTTTTAAAGA+AGG | + | chr5_2:56498199-56498218 | Msa0777510:CDS | 25.0% |
| ! | ATAAATTACCATCACAAAAG+AGG | + | chr5_2:56498383-56498402 | Msa0777510:intron | 25.0% |
| ! | TAAATTACCATCACAAAAGA+GGG | + | chr5_2:56498384-56498403 | Msa0777510:intron | 25.0% |
| ! | CATAAACAATGATATGTTTC+AGG | - | chr5_2:56498962-56498981 | None:intergenic | 25.0% |
| !! | AATCTTGCATCCATTTATTT+TGG | - | chr5_2:56499144-56499163 | None:intergenic | 25.0% |
| !! | GAAAAATGAGCTTTAGTATT+AGG | + | chr5_2:56499178-56499197 | Msa0777510:intron | 25.0% |
| !!! | ATCATCTGTTATTTTCTCAT+TGG | - | chr5_2:56499403-56499422 | None:intergenic | 25.0% |
| !!! | ATCCTTCTTTTTTATACCTA+TGG | - | chr5_2:56499445-56499464 | None:intergenic | 25.0% |
| ! | ATAGGTATAAAAAAGAAGGA+TGG | + | chr5_2:56499444-56499463 | Msa0777510:intron | 25.0% |
| ! | ATTAAAAGGCTAACAAACAA+AGG | - | chr5_2:56499779-56499798 | None:intergenic | 25.0% |
| ! | AAGGAAAATAACAATGAATG+AGG | - | chr5_2:56499870-56499889 | None:intergenic | 25.0% |
| !! | GATTTTATCAAAAGATGTCA+AGG | - | chr5_2:56499889-56499908 | None:intergenic | 25.0% |
| ! | CAGAGCAAGAAATTATTTAA+GGG | - | chr5_2:56499938-56499957 | None:intergenic | 25.0% |
| ! | ACAGAGCAAGAAATTATTTA+AGG | - | chr5_2:56499939-56499958 | None:intergenic | 25.0% |
| ! | TGTTTAAGTGTTTAAAAGAG+AGG | + | chr5_2:56500025-56500044 | Msa0777510:intron | 25.0% |
| !! | TTCTTTTAAACAATGTGTGT+CGG | - | chr5_2:56500202-56500221 | None:intergenic | 25.0% |
| ! | ACACACATTGTTTAAAAGAA+AGG | + | chr5_2:56500202-56500221 | Msa0777510:intron | 25.0% |
| !!! | AGAATTTTTTGGAACATTTC+AGG | - | chr5_2:56500744-56500763 | None:intergenic | 25.0% |
| !! | TTCCAAAAAATTCTGTCTTT+TGG | + | chr5_2:56500750-56500769 | Msa0777510:intron | 25.0% |
| !!! | ATCCAAAAGACAGAATTTTT+TGG | - | chr5_2:56500755-56500774 | None:intergenic | 25.0% |
| ! | AATCATTGGAAATTCTTGAT+TGG | - | chr5_2:56501020-56501039 | None:intergenic | 25.0% |
| ! | CAAGAATTTCCAATGATTTA+AGG | + | chr5_2:56501022-56501041 | Msa0777510:intron | 25.0% |
| !! | GGAATCTTTTCAATTAATCA+TGG | - | chr5_2:56501086-56501105 | None:intergenic | 25.0% |
| ! | TAAAAATCCGTGAAATAGAA+GGG | - | chr5_2:56501108-56501127 | None:intergenic | 25.0% |
| ! | TTAAAAATCCGTGAAATAGA+AGG | - | chr5_2:56501109-56501128 | None:intergenic | 25.0% |
| GAAGATATAATCCCATATGT+TGG | + | chr5_2:56498049-56498068 | Msa0777510:CDS | 30.0% | |
| AAATCTATATGCGTGATCTT+CGG | - | chr5_2:56498089-56498108 | None:intergenic | 30.0% | |
| TAATTTATGCTTACTTCTGG+GGG | - | chr5_2:56498371-56498390 | None:intergenic | 30.0% | |
| GTAATTTATGCTTACTTCTG+GGG | - | chr5_2:56498372-56498391 | None:intergenic | 30.0% | |
| GGTAATTTATGCTTACTTCT+GGG | - | chr5_2:56498373-56498392 | None:intergenic | 30.0% | |
| TGGTAATTTATGCTTACTTC+TGG | - | chr5_2:56498374-56498393 | None:intergenic | 30.0% | |
| GTCGTAAATTCTTATTAGTG+CGG | - | chr5_2:56498745-56498764 | None:intergenic | 30.0% | |
| ATAACACACTTTCTCTATGA+TGG | - | chr5_2:56498793-56498812 | None:intergenic | 30.0% | |
| ! | CATAGAGAAAGTGTGTTATT+TGG | + | chr5_2:56498794-56498813 | Msa0777510:intron | 30.0% |
| ! | GTTGTTCAAGACTTTTCTTA+AGG | + | chr5_2:56498859-56498878 | Msa0777510:intron | 30.0% |
| TGATCTGTGAAAATTGTCTT+TGG | - | chr5_2:56498902-56498921 | None:intergenic | 30.0% | |
| CATATCATTGTTTATGCTTG+TGG | + | chr5_2:56498966-56498985 | Msa0777510:intron | 30.0% | |
| GATTTGAGAAGTTGCATTTA+TGG | + | chr5_2:56499055-56499074 | Msa0777510:intron | 30.0% | |
| CATTTATGGTTTCGAATATG+AGG | + | chr5_2:56499069-56499088 | Msa0777510:intron | 30.0% | |
| ACAACCTTCACCAAAATAAA+TGG | + | chr5_2:56499131-56499150 | Msa0777510:intron | 30.0% | |
| AGCCATAGGTATAAAAAAGA+AGG | + | chr5_2:56499440-56499459 | Msa0777510:intron | 30.0% | |
| AAAAGAAGGATGGTAAATCA+TGG | + | chr5_2:56499454-56499473 | Msa0777510:intron | 30.0% | |
| GATGGTAAATCATGGATAAA+AGG | + | chr5_2:56499462-56499481 | Msa0777510:intron | 30.0% | |
| AAACGTTAATATCATGGCAT+GGG | - | chr5_2:56499843-56499862 | None:intergenic | 30.0% | |
| AACTAATTGTTTCGAGCAAT+AGG | + | chr5_2:56500057-56500076 | Msa0777510:intron | 30.0% | |
| AGGAGAATATATTGAGCTTT+AGG | + | chr5_2:56500077-56500096 | Msa0777510:intron | 30.0% | |
| !! | TATTATCAGAGTATCGTGTT+CGG | - | chr5_2:56500113-56500132 | None:intergenic | 30.0% |
| AAATGCAGATGAATGATGAA+GGG | - | chr5_2:56500474-56500493 | None:intergenic | 30.0% | |
| ! | CTGAAGAATGTTTTCAACTT+CGG | + | chr5_2:56500568-56500587 | Msa0777510:intron | 30.0% |
| !!! | CCTAGTTTTGTTTCAAATGT+GGG | - | chr5_2:56500708-56500727 | None:intergenic | 30.0% |
| !!! | TCCTAGTTTTGTTTCAAATG+TGG | - | chr5_2:56500709-56500728 | None:intergenic | 30.0% |
| ! | ATTCTTTTCTAGGTACTCAT+AGG | + | chr5_2:56500842-56500861 | Msa0777510:intron | 30.0% |
| !!! | GTTCTTCGATTTTGAGATTT+CGG | + | chr5_2:56500978-56500997 | Msa0777510:intron | 30.0% |
| CAAGGAAATCCTTAAATCAT+TGG | - | chr5_2:56501034-56501053 | None:intergenic | 30.0% | |
| CAATGATTTAAGGATTTCCT+TGG | + | chr5_2:56501032-56501051 | Msa0777510:intron | 30.0% | |
| AAAAATCCGTGAAATAGAAG+GGG | - | chr5_2:56501107-56501126 | None:intergenic | 30.0% | |
| ! | ATTTCACGGATTTTTAAACC+AGG | + | chr5_2:56501112-56501131 | Msa0777510:intron | 30.0% |
| TTTGTGTTAAGAAGTTGGGA+AGG | + | chr5_2:56497883-56497902 | Msa0777510:intron | 35.0% | |
| TATAATCCCATATGTTGGCA+TGG | + | chr5_2:56498054-56498073 | Msa0777510:CDS | 35.0% | |
| !!! | GTTTTAAAGAAGGCCTTAAG+AGG | + | chr5_2:56498209-56498228 | Msa0777510:CDS | 35.0% |
| CATCATCTTTGATCCTCTTA+AGG | - | chr5_2:56498225-56498244 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGCGTATACCAGAT+CGG | - | chr5_2:56498437-56498456 | None:intergenic | 35.0% |
| ! | CTTCATTTCCTTCATCCTTT+TGG | - | chr5_2:56498544-56498563 | None:intergenic | 35.0% |
| CAAAAGGATGAAGGAAATGA+AGG | + | chr5_2:56498542-56498561 | Msa0777510:intron | 35.0% | |
| ATTCTTATTAGTGCGGTATG+TGG | - | chr5_2:56498738-56498757 | None:intergenic | 35.0% | |
| AATCCAACGAAAGGAGAAAA+TGG | - | chr5_2:56498767-56498786 | None:intergenic | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGTG+TGG | + | chr5_2:56498869-56498888 | Msa0777510:intron | 35.0% |
| TATGTTTCAGGAAAAACCTC+TGG | - | chr5_2:56498950-56498969 | None:intergenic | 35.0% | |
| !!! | GCATCCATTTATTTTGGTGA+AGG | - | chr5_2:56499138-56499157 | None:intergenic | 35.0% |
| CAATTAAGTGAGAGCTTCAA+TGG | + | chr5_2:56499235-56499254 | Msa0777510:intron | 35.0% | |
| !! | ACTTCACCAAGATTTGTTGT+TGG | - | chr5_2:56499369-56499388 | None:intergenic | 35.0% |
| GTAAATCATGGATAAAAGGC+AGG | + | chr5_2:56499466-56499485 | Msa0777510:intron | 35.0% | |
| ! | TTTTTCTCCACACAACTCTT+AGG | - | chr5_2:56499492-56499511 | None:intergenic | 35.0% |
| AAAAAACACAGAAGAAGCAG+AGG | + | chr5_2:56499507-56499526 | Msa0777510:intron | 35.0% | |
| TAGTACCTGCATAATTGACA+TGG | - | chr5_2:56499571-56499590 | None:intergenic | 35.0% | |
| TGTCAATTATGCAGGTACTA+CGG | + | chr5_2:56499571-56499590 | Msa0777510:intron | 35.0% | |
| CAAACGTTAATATCATGGCA+TGG | - | chr5_2:56499844-56499863 | None:intergenic | 35.0% | |
| TATTTCAGACCCTAAACTCA+GGG | - | chr5_2:56500327-56500346 | None:intergenic | 35.0% | |
| TTATTTCAGACCCTAAACTC+AGG | - | chr5_2:56500328-56500347 | None:intergenic | 35.0% | |
| ! | TAGGGTCTGAAATAATGATG+TGG | + | chr5_2:56500333-56500352 | Msa0777510:intron | 35.0% |
| CAAATGCAGATGAATGATGA+AGG | - | chr5_2:56500475-56500494 | None:intergenic | 35.0% | |
| ! | CCCACATTTGAAACAAAACT+AGG | + | chr5_2:56500705-56500724 | Msa0777510:intron | 35.0% |
| ! | CTTTTGGATTTTCAACATGC+AGG | + | chr5_2:56500766-56500785 | Msa0777510:intron | 35.0% |
| ACAAGCAAACCCATAAAATC+TGG | - | chr5_2:56500792-56500811 | None:intergenic | 35.0% | |
| AATCTCAAAATCGAAGAACC+AGG | - | chr5_2:56500977-56500996 | None:intergenic | 35.0% | |
| CATTGGAAATTCTTGATTGG+TGG | - | chr5_2:56501017-56501036 | None:intergenic | 35.0% | |
| AAGATTCCCCTTCTATTTCA+CGG | + | chr5_2:56501098-56501117 | Msa0777510:intron | 35.0% | |
| ! | TTTTCCATGTTTGCATTTGC+AGG | + | chr5_2:56501270-56501289 | Msa0777510:intron | 35.0% |
| TTAAAAGATCGATGCACAAC+TGG | + | chr5_2:56501345-56501364 | Msa0777510:three_prime_UTR | 35.0% | |
| TATGTACCACAACATTGTCA+AGG | - | chr5_2:56501432-56501451 | None:intergenic | 35.0% | |
| CTTTCTTTGCTCATTTGCTT+TGG | - | chr5_2:56501520-56501539 | None:intergenic | 35.0% | |
| GAAGCACAGACACTGATAAT+CGG | - | chr5_2:56497829-56497848 | None:intergenic | 40.0% | |
| TGTTAAGAAGTTGGGAAGGA+AGG | + | chr5_2:56497887-56497906 | Msa0777510:intron | 40.0% | |
| TGGGAAGGAAGGAGTAATTA+CGG | + | chr5_2:56497898-56497917 | Msa0777510:intron | 40.0% | |
| TCTCGCAAAGATATCAGAAC+TGG | + | chr5_2:56498256-56498275 | Msa0777510:CDS | 40.0% | |
| TAGCACATGTTGTCATCAGT+CGG | + | chr5_2:56498284-56498303 | Msa0777510:CDS | 40.0% | |
| TTTATAAGTCAACACGTCCG+AGG | + | chr5_2:56498468-56498487 | Msa0777510:intron | 40.0% | |
| TTATAAGTCAACACGTCCGA+GGG | + | chr5_2:56498469-56498488 | Msa0777510:intron | 40.0% | |
| GCAATCATTTAACCGCCAAA+AGG | + | chr5_2:56498526-56498545 | Msa0777510:intron | 40.0% | |
| TTTAACCGCCAAAAGGATGA+AGG | + | chr5_2:56498533-56498552 | Msa0777510:intron | 40.0% | |
| ! | CATTTCCTTCATCCTTTTGG+CGG | - | chr5_2:56498541-56498560 | None:intergenic | 40.0% |
| AGGATGAAGGAAATGAAGGA+AGG | + | chr5_2:56498546-56498565 | Msa0777510:intron | 40.0% | |
| TGATGGTTGAATCCAACGAA+AGG | - | chr5_2:56498776-56498795 | None:intergenic | 40.0% | |
| AAACTGCTGCATCATTTGAG+TGG | + | chr5_2:56498837-56498856 | Msa0777510:intron | 40.0% | |
| AGAGCTTCAATGGTCGTTTA+CGG | + | chr5_2:56499245-56499264 | Msa0777510:intron | 40.0% | |
| TCCACACCAACAACAAATCT+TGG | + | chr5_2:56499360-56499379 | Msa0777510:intron | 40.0% | |
| !! | ACCAAGATTTGTTGTTGGTG+TGG | - | chr5_2:56499364-56499383 | None:intergenic | 40.0% |
| ! | GTGGTTGAATTTTGTGTCAC+AGG | - | chr5_2:56499549-56499568 | None:intergenic | 40.0% |
| AACCACCATGTCAATTATGC+AGG | + | chr5_2:56499563-56499582 | Msa0777510:intron | 40.0% | |
| TACCTGCATAATTGACATGG+TGG | - | chr5_2:56499568-56499587 | None:intergenic | 40.0% | |
| GTCAATTATGCAGGTACTAC+GGG | + | chr5_2:56499572-56499591 | Msa0777510:intron | 40.0% | |
| GGTCGCAAACGTTAATATCA+TGG | - | chr5_2:56499849-56499868 | None:intergenic | 40.0% | |
| TGCTCATCACTTCAGAGAAA+GGG | - | chr5_2:56499993-56500012 | None:intergenic | 40.0% | |
| TTGCTCATCACTTCAGAGAA+AGG | - | chr5_2:56499994-56500013 | None:intergenic | 40.0% | |
| GATTTGCAGTGCATTCTGTT+TGG | + | chr5_2:56500255-56500274 | Msa0777510:intron | 40.0% | |
| ATTTCAGACCCTAAACTCAG+GGG | - | chr5_2:56500326-56500345 | None:intergenic | 40.0% | |
| ATTGTACCCATTCTTCCTTG+TGG | + | chr5_2:56500389-56500408 | Msa0777510:intron | 40.0% | |
| AATGAAACTCATGCTCCACA+AGG | - | chr5_2:56500407-56500426 | None:intergenic | 40.0% | |
| CATCTGCATTTGAGCGAATT+TGG | + | chr5_2:56500483-56500502 | Msa0777510:intron | 40.0% | |
| TTAAATGCTAGCCGAAACAG+TGG | + | chr5_2:56500507-56500526 | Msa0777510:intron | 40.0% | |
| TAAATGCTAGCCGAAACAGT+GGG | + | chr5_2:56500508-56500527 | Msa0777510:intron | 40.0% | |
| CCAACAAAGTCTAGTAGCTT+CGG | - | chr5_2:56500544-56500563 | None:intergenic | 40.0% | |
| CGAAGCTACTAGACTTTGTT+GGG | + | chr5_2:56500542-56500561 | Msa0777510:intron | 40.0% | |
| TCAACTTCGGATCTATCACT+CGG | + | chr5_2:56500581-56500600 | Msa0777510:intron | 40.0% | |
| !!! | GTTTTGTTTCAAATGTGGGC+TGG | - | chr5_2:56500704-56500723 | None:intergenic | 40.0% |
| ! | AACATGCAGGCCAGATTTTA+TGG | + | chr5_2:56500779-56500798 | Msa0777510:intron | 40.0% |
| ! | ACATGCAGGCCAGATTTTAT+GGG | + | chr5_2:56500780-56500799 | Msa0777510:intron | 40.0% |
| AAGGAAATGAGAAGGCAGAT+CGG | - | chr5_2:56500900-56500919 | None:intergenic | 40.0% | |
| ATCGCACAAAGGAAATGAGA+AGG | - | chr5_2:56500908-56500927 | None:intergenic | 40.0% | |
| ACGTTCCCATTTCAACTTTG+GGG | - | chr5_2:56500945-56500964 | None:intergenic | 40.0% | |
| CACGTTCCCATTTCAACTTT+GGG | - | chr5_2:56500946-56500965 | None:intergenic | 40.0% | |
| ACACGTTCCCATTTCAACTT+TGG | - | chr5_2:56500947-56500966 | None:intergenic | 40.0% | |
| AAGTTGAAATGGGAACGTGT+TGG | + | chr5_2:56500947-56500966 | Msa0777510:intron | 40.0% | |
| !!! | ATTTTGAGATTTCGGTGCCA+CGG | + | chr5_2:56500986-56501005 | Msa0777510:intron | 40.0% |
| GATCGAGAAAGAATTCTCCA+AGG | - | chr5_2:56501052-56501071 | None:intergenic | 40.0% | |
| ! | TCACGGATTTTTAAACCAGG+AGG | + | chr5_2:56501115-56501134 | Msa0777510:intron | 40.0% |
| ! | AAAGTGCTCTTGCAAATGTC+TGG | - | chr5_2:56501147-56501166 | None:intergenic | 40.0% |
| !! | AGACATTTGCAAGAGCACTT+TGG | + | chr5_2:56501146-56501165 | Msa0777510:intron | 40.0% |
| !! | ATTTGCAAGAGCACTTTGGA+CGG | + | chr5_2:56501150-56501169 | Msa0777510:intron | 40.0% |
| GAATCGAAGCATACCATTCT+AGG | - | chr5_2:56501211-56501230 | None:intergenic | 40.0% | |
| GAAACATGCAAATGCAGACA+CGG | - | chr5_2:56501243-56501262 | None:intergenic | 40.0% | |
| ATGTTAGGAGAGGGAGTAAT+TGG | + | chr5_2:56501303-56501322 | Msa0777510:CDS | 40.0% | |
| GTCTAACTCGTTACAACTGA+GGG | + | chr5_2:56501372-56501391 | Msa0777510:three_prime_UTR | 40.0% | |
| TTGTCTGTCTGTCTTTGGTT+TGG | - | chr5_2:56501458-56501477 | None:intergenic | 40.0% | |
| TTTGCTCATTTGCTTTGGTG+CGG | - | chr5_2:56501515-56501534 | None:intergenic | 40.0% | |
| GAGAAACAACAAACTTCCAC+AGG | + | chr5_2:56501574-56501593 | Msa0777510:three_prime_UTR | 40.0% | |
| CAGACTCCATGCCAACATAT+GGG | - | chr5_2:56498063-56498082 | None:intergenic | 45.0% | |
| TCAGACTCCATGCCAACATA+TGG | - | chr5_2:56498064-56498083 | None:intergenic | 45.0% | |
| AGCACATGTTGTCATCAGTC+GGG | + | chr5_2:56498285-56498304 | Msa0777510:CDS | 45.0% | |
| ! | GCAGAAACCCTCTTTTGTGA+TGG | - | chr5_2:56498394-56498413 | None:intergenic | 45.0% |
| ! | CGACCATTTTCTCCTTTCGT+TGG | + | chr5_2:56498761-56498780 | Msa0777510:intron | 45.0% |
| AGGATGACTTTCTTGCTGCT+TGG | + | chr5_2:56499089-56499108 | Msa0777510:intron | 45.0% | |
| ! | ACCTATGGCTTGTGATACAG+CGG | - | chr5_2:56499430-56499449 | None:intergenic | 45.0% |
| TGTTGTTGTCGTGTCAGTGA+TGG | + | chr5_2:56500173-56500192 | Msa0777510:intron | 45.0% | |
| AGCTTTCTCCCCTGAGTTTA+GGG | + | chr5_2:56500315-56500334 | Msa0777510:intron | 45.0% | |
| CATGCTCCACAAGGAAGAAT+GGG | - | chr5_2:56500398-56500417 | None:intergenic | 45.0% | |
| TCATGCTCCACAAGGAAGAA+TGG | - | chr5_2:56500399-56500418 | None:intergenic | 45.0% | |
| !! | TGCAAGGCTTCTGAAACCAA+TGG | - | chr5_2:56500438-56500457 | None:intergenic | 45.0% |
| CCGAAGCTACTAGACTTTGT+TGG | + | chr5_2:56500541-56500560 | Msa0777510:intron | 45.0% | |
| !! | AACTGATTTGACCACAGCCA+TGG | + | chr5_2:56500607-56500626 | Msa0777510:intron | 45.0% |
| CAAGATGATGCTCACTGCTT+AGG | - | chr5_2:56500634-56500653 | None:intergenic | 45.0% | |
| !! | TCTTGACTGGAAGCGTTTAG+AGG | + | chr5_2:56500649-56500668 | Msa0777510:intron | 45.0% |
| !! | TGTTTCAAATGTGGGCTGGT+GGG | - | chr5_2:56500700-56500719 | None:intergenic | 45.0% |
| !! | TTGTTTCAAATGTGGGCTGG+TGG | - | chr5_2:56500701-56500720 | None:intergenic | 45.0% |
| TCCTTTGTGCGATAGTGCAT+TGG | + | chr5_2:56500915-56500934 | Msa0777510:intron | 45.0% | |
| CCTTTGTGCGATAGTGCATT+GGG | + | chr5_2:56500916-56500935 | Msa0777510:intron | 45.0% | |
| CGTTCCCATTTCAACTTTGG+GGG | - | chr5_2:56500944-56500963 | None:intergenic | 45.0% | |
| ! | CTTGATTGGTGGTTAAACCG+TGG | - | chr5_2:56501006-56501025 | None:intergenic | 45.0% |
| AATGTCTGGTGTAATCCTCC+TGG | - | chr5_2:56501133-56501152 | None:intergenic | 45.0% | |
| AATGCAGACACGGAAGTTCA+AGG | - | chr5_2:56501233-56501252 | None:intergenic | 45.0% | |
| AGGACCTGCAAATGCAAACA+TGG | - | chr5_2:56501277-56501296 | None:intergenic | 45.0% | |
| TCCTGTTGACATGTTAGGAG+AGG | + | chr5_2:56501293-56501312 | Msa0777510:CDS | 45.0% | |
| CCTGTTGACATGTTAGGAGA+GGG | + | chr5_2:56501294-56501313 | Msa0777510:CDS | 45.0% | |
| ! | GAGGGAGTAATTGGTTCATG+AGG | + | chr5_2:56501312-56501331 | Msa0777510:CDS | 45.0% |
| GGTCTAACTCGTTACAACTG+AGG | + | chr5_2:56501371-56501390 | Msa0777510:three_prime_UTR | 45.0% | |
| ACAACTGAGGGTTGTGGAAA+AGG | + | chr5_2:56501384-56501403 | Msa0777510:three_prime_UTR | 45.0% | |
| AACATTGTCAAGGATCCTGC+TGG | - | chr5_2:56501422-56501441 | None:intergenic | 45.0% | |
| CAGGATCCTTGACAATGTTG+TGG | + | chr5_2:56501423-56501442 | Msa0777510:three_prime_UTR | 45.0% | |
| ATGAGCAAAGAAAGCTGACC+CGG | + | chr5_2:56501526-56501545 | Msa0777510:three_prime_UTR | 45.0% | |
| TAGTGGTTCTCTCTAACCTG+TGG | - | chr5_2:56501593-56501612 | None:intergenic | 45.0% | |
| GTCATCAGTCGGGAATCAAG+TGG | + | chr5_2:56498295-56498314 | Msa0777510:CDS | 50.0% | |
| ATCCAACATTCTCCCTCCCT+CGG | - | chr5_2:56498488-56498507 | None:intergenic | 50.0% | |
| CACAGATCAAGATGCTGCCA+TGG | + | chr5_2:56498913-56498932 | Msa0777510:intron | 50.0% | |
| !!! | CTCTGGAATCGCTTTTGCCA+TGG | - | chr5_2:56498933-56498952 | None:intergenic | 50.0% |
| CATGGCAAAAGCGATTCCAG+AGG | + | chr5_2:56498931-56498950 | Msa0777510:intron | 50.0% | |
| ACCGCTGTATCACAAGCCAT+AGG | + | chr5_2:56499426-56499445 | Msa0777510:intron | 50.0% | |
| TGTGTAACTGTGATCCAGCC+TGG | + | chr5_2:56500291-56500310 | Msa0777510:intron | 50.0% | |
| GTGTAACTGTGATCCAGCCT+GGG | + | chr5_2:56500292-56500311 | Msa0777510:intron | 50.0% | |
| GAGCTTTCTCCCCTGAGTTT+AGG | + | chr5_2:56500314-56500333 | Msa0777510:intron | 50.0% | |
| TCAGCTCAGTCCCACTGTTT+CGG | - | chr5_2:56500521-56500540 | None:intergenic | 50.0% | |
| ATGCTCACTGCTTAGGTCCA+TGG | - | chr5_2:56500627-56500646 | None:intergenic | 50.0% | |
| GCAGTGAGCATCATCTTGAC+TGG | + | chr5_2:56500636-56500655 | Msa0777510:intron | 50.0% | |
| AGGCAGATCGGATCCATCAT+GGG | - | chr5_2:56500888-56500907 | None:intergenic | 50.0% | |
| AAGGCAGATCGGATCCATCA+TGG | - | chr5_2:56500889-56500908 | None:intergenic | 50.0% | |
| CCCAATGCACTATCGCACAA+AGG | - | chr5_2:56500919-56500938 | None:intergenic | 50.0% | |
| GGAGCCCCCAAAGTTGAAAT+GGG | + | chr5_2:56500937-56500956 | Msa0777510:intron | 50.0% | |
| TGGGAACGTGTTGGAAATCC+TGG | + | chr5_2:56500956-56500975 | Msa0777510:intron | 50.0% | |
| GCAGGTCCTGTTGACATGTT+AGG | + | chr5_2:56501288-56501307 | Msa0777510:intron | 50.0% | |
| CCCTCTCCTAACATGTCAAC+AGG | - | chr5_2:56501297-56501316 | None:intergenic | 50.0% | |
| AGATCGATGCACAACTGGAG+CGG | + | chr5_2:56501350-56501369 | Msa0777510:three_prime_UTR | 50.0% | |
| CTCGTTACAACTGAGGGTTG+TGG | + | chr5_2:56501378-56501397 | Msa0777510:three_prime_UTR | 50.0% | |
| TTGTCAAGGATCCTGCTGGT+GGG | - | chr5_2:56501418-56501437 | None:intergenic | 50.0% | |
| ATTGTCAAGGATCCTGCTGG+TGG | - | chr5_2:56501419-56501438 | None:intergenic | 50.0% | |
| GCTGCTTGTCTGTCTGTCTT+TGG | - | chr5_2:56501463-56501482 | None:intergenic | 50.0% | |
| TGAGCAAAGAAAGCTGACCC+GGG | + | chr5_2:56501527-56501546 | Msa0777510:three_prime_UTR | 50.0% | |
| TCGCCATTTCAGAATCGACC+CGG | - | chr5_2:56501548-56501567 | None:intergenic | 50.0% | |
| TTTCTGCCGCTCAAGCAGCA+TGG | + | chr5_2:56498407-56498426 | Msa0777510:intron | 55.0% | |
| ! | GGTTTGCCATGCTGCTTGAG+CGG | - | chr5_2:56498416-56498435 | None:intergenic | 55.0% |
| AGCAGCATGGCAAACCGATC+TGG | + | chr5_2:56498420-56498439 | Msa0777510:intron | 55.0% | |
| TAAGTCAACACGTCCGAGGG+AGG | + | chr5_2:56498472-56498491 | Msa0777510:intron | 55.0% | |
| AAGTCAACACGTCCGAGGGA+GGG | + | chr5_2:56498473-56498492 | Msa0777510:intron | 55.0% | |
| ! | GGGCGAAACACGTTTTCAGC+TGG | + | chr5_2:56499199-56499218 | Msa0777510:intron | 55.0% |
| AGGCAGGCCTAAGAGTTGTG+TGG | + | chr5_2:56499482-56499501 | Msa0777510:intron | 55.0% | |
| GGGCAGTAACAGCAGATGCA+AGG | - | chr5_2:56500454-56500473 | None:intergenic | 55.0% | |
| ACTGCTTAGGTCCATGGCTG+TGG | - | chr5_2:56500621-56500640 | None:intergenic | 55.0% | |
| CCATCATGGGACGTGTGGAA+GGG | - | chr5_2:56500875-56500894 | None:intergenic | 55.0% | |
| TCCATCATGGGACGTGTGGA+AGG | - | chr5_2:56500876-56500895 | None:intergenic | 55.0% | |
| GGGAGCCCCCAAAGTTGAAA+TGG | + | chr5_2:56500936-56500955 | Msa0777510:intron | 55.0% | |
| AGGTAATCACTCCCACCAGC+AGG | + | chr5_2:56501404-56501423 | Msa0777510:three_prime_UTR | 55.0% | |
| ! | CATTTGCTTTGGTGCGGCTC+AGG | - | chr5_2:56501509-56501528 | None:intergenic | 55.0% |
| ! | GACCCGGGTCGATTCTGAAA+TGG | + | chr5_2:56501542-56501561 | Msa0777510:three_prime_UTR | 55.0% |
| CGCCATTTCAGAATCGACCC+GGG | - | chr5_2:56501547-56501566 | None:intergenic | 55.0% | |
| GTCCGAGGGAGGGAGAATGT+TGG | + | chr5_2:56498483-56498502 | Msa0777510:intron | 60.0% | |
| ACTCAGGGGAGAAAGCTCCC+AGG | - | chr5_2:56500312-56500331 | None:intergenic | 60.0% | |
| CCCTTCCACACGTCCCATGA+TGG | + | chr5_2:56500872-56500891 | Msa0777510:intron | 60.0% | |
| CGGATCCATCATGGGACGTG+TGG | - | chr5_2:56500880-56500899 | None:intergenic | 60.0% | |
| AGGGGAGAAAGCTCCCAGGC+TGG | - | chr5_2:56500308-56500327 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 56497804 | 56501627 | 56497804 | ID=Msa0777510;Name=Msa0777510 |
| chr5_2 | mRNA | 56497804 | 56501627 | 56497804 | ID=Msa0777510-mRNA-1;Parent=Msa0777510;Name=Msa0777510-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0.33|0.66|1|1|3|295|146 |
| chr5_2 | exon | 56497804 | 56497837 | 56497804 | ID=Msa0777510-mRNA-1:exon:16730;Parent=Msa0777510-mRNA-1 |
| chr5_2 | exon | 56498011 | 56498376 | 56498011 | ID=Msa0777510-mRNA-1:exon:16731;Parent=Msa0777510-mRNA-1 |
| chr5_2 | exon | 56501292 | 56501627 | 56501292 | ID=Msa0777510-mRNA-1:exon:16732;Parent=Msa0777510-mRNA-1 |
| chr5_2 | CDS | 56497804 | 56497837 | 56497804 | ID=Msa0777510-mRNA-1:cds;Parent=Msa0777510-mRNA-1 |
| chr5_2 | CDS | 56498011 | 56498376 | 56498011 | ID=Msa0777510-mRNA-1:cds;Parent=Msa0777510-mRNA-1 |
| chr5_2 | CDS | 56501292 | 56501332 | 56501292 | ID=Msa0777510-mRNA-1:cds;Parent=Msa0777510-mRNA-1 |
| chr5_2 | three_prime_UTR | 56501333 | 56501627 | 56501333 | ID=Msa0777510-mRNA-1:three_prime_utr;Parent=Msa0777510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
