Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780660 | XP_024640189.1 | 95.108 | 695 | 30 | 1 | 1 | 695 | 1 | 691 | 0.0 | 1388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780660 | sp|Q9SZL8|FRS5_ARATH | 36.034 | 580 | 343 | 10 | 25 | 583 | 62 | 634 | 2.19e-116 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780660 | A0A396HW08 | 95.108 | 695 | 30 | 1 | 1 | 695 | 1 | 691 | 0.0 | 1388 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0780660 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780660 | MtrunA17_Chr5g0441581 | 95.108 | 695 | 30 | 1 | 1 | 695 | 1 | 691 | 0.0 | 1388 |
| Msa0780660 | MtrunA17_Chr2g0296781 | 46.656 | 598 | 309 | 3 | 36 | 624 | 1 | 597 | 0.0 | 563 |
| Msa0780660 | MtrunA17_Chr6g0477261 | 51.235 | 486 | 236 | 1 | 140 | 624 | 1 | 486 | 6.27e-180 | 528 |
| Msa0780660 | MtrunA17_Chr1g0196541 | 42.404 | 599 | 327 | 7 | 36 | 624 | 1 | 591 | 9.70e-163 | 487 |
| Msa0780660 | MtrunA17_Chr5g0448761 | 35.240 | 647 | 385 | 14 | 31 | 649 | 59 | 699 | 9.48e-123 | 385 |
| Msa0780660 | MtrunA17_Chr2g0291581 | 35.073 | 613 | 382 | 8 | 32 | 634 | 71 | 677 | 7.61e-119 | 372 |
| Msa0780660 | MtrunA17_Chr1g0207551 | 34.687 | 591 | 367 | 5 | 30 | 610 | 32 | 613 | 1.58e-115 | 367 |
| Msa0780660 | MtrunA17_Chr1g0202341 | 33.609 | 604 | 373 | 12 | 1 | 585 | 17 | 611 | 6.81e-112 | 353 |
| Msa0780660 | MtrunA17_Chr2g0329031 | 33.120 | 625 | 383 | 12 | 32 | 638 | 14 | 621 | 6.06e-106 | 339 |
| Msa0780660 | MtrunA17_Chr3g0080351 | 30.816 | 662 | 410 | 12 | 31 | 674 | 75 | 706 | 4.18e-104 | 337 |
| Msa0780660 | MtrunA17_Chr2g0291591 | 34.087 | 531 | 326 | 6 | 4 | 516 | 32 | 556 | 1.90e-94 | 304 |
| Msa0780660 | MtrunA17_Chr5g0448511 | 36.896 | 393 | 240 | 5 | 193 | 583 | 11 | 397 | 5.31e-91 | 295 |
| Msa0780660 | MtrunA17_Chr5g0440451 | 31.741 | 649 | 374 | 13 | 14 | 626 | 35 | 650 | 4.22e-90 | 302 |
| Msa0780660 | MtrunA17_Chr3g0118611 | 37.986 | 437 | 253 | 7 | 189 | 620 | 115 | 538 | 2.01e-88 | 294 |
| Msa0780660 | MtrunA17_Chr2g0324011 | 29.577 | 568 | 379 | 8 | 30 | 583 | 8 | 568 | 1.76e-82 | 273 |
| Msa0780660 | MtrunA17_Chr2g0287061 | 32.389 | 565 | 329 | 14 | 27 | 581 | 178 | 699 | 7.22e-81 | 274 |
| Msa0780660 | MtrunA17_Chr8g0363841 | 30.442 | 565 | 370 | 10 | 35 | 583 | 20 | 577 | 9.36e-80 | 268 |
| Msa0780660 | MtrunA17_Chr2g0287651 | 28.060 | 670 | 444 | 11 | 13 | 654 | 45 | 704 | 1.21e-76 | 264 |
| Msa0780660 | MtrunA17_Chr6g0451441 | 57.895 | 209 | 77 | 3 | 7 | 206 | 61 | 267 | 9.82e-73 | 244 |
| Msa0780660 | MtrunA17_Chr6g0458391 | 28.648 | 562 | 370 | 12 | 32 | 583 | 225 | 765 | 8.59e-70 | 243 |
| Msa0780660 | MtrunA17_Chr1g0198761 | 28.190 | 674 | 432 | 21 | 35 | 676 | 50 | 703 | 9.86e-69 | 240 |
| Msa0780660 | MtrunA17_Chr1g0203721 | 25.484 | 671 | 449 | 17 | 33 | 659 | 64 | 727 | 1.17e-65 | 233 |
| Msa0780660 | MtrunA17_Chr3g0082121 | 27.160 | 648 | 437 | 16 | 20 | 652 | 31 | 658 | 5.01e-63 | 223 |
| Msa0780660 | MtrunA17_Chr1g0203051 | 26.345 | 539 | 371 | 10 | 47 | 570 | 94 | 621 | 2.12e-60 | 214 |
| Msa0780660 | MtrunA17_Chr2g0276841 | 27.273 | 572 | 378 | 13 | 32 | 580 | 70 | 626 | 1.10e-57 | 208 |
| Msa0780660 | MtrunA17_Chr2g0294841 | 27.478 | 575 | 375 | 14 | 32 | 579 | 45 | 604 | 1.65e-57 | 209 |
| Msa0780660 | MtrunA17_Chr2g0290391 | 26.942 | 605 | 385 | 15 | 9 | 580 | 30 | 610 | 6.82e-53 | 194 |
| Msa0780660 | MtrunA17_Chr1g0172041 | 69.027 | 113 | 35 | 0 | 496 | 608 | 1 | 113 | 4.85e-50 | 170 |
| Msa0780660 | MtrunA17_Chr5g0431001 | 30.861 | 337 | 216 | 7 | 117 | 438 | 159 | 493 | 2.69e-46 | 172 |
| Msa0780660 | MtrunA17_Chr7g0258861 | 33.447 | 293 | 181 | 5 | 30 | 308 | 8 | 300 | 1.93e-43 | 159 |
| Msa0780660 | MtrunA17_Chr1g0164591 | 31.290 | 310 | 194 | 6 | 113 | 412 | 8 | 308 | 1.63e-41 | 154 |
| Msa0780660 | MtrunA17_Chr2g0308841 | 29.302 | 215 | 142 | 5 | 369 | 580 | 17 | 224 | 2.26e-19 | 88.6 |
| Msa0780660 | MtrunA17_Chr6g0476441 | 40.594 | 101 | 59 | 1 | 525 | 624 | 2 | 102 | 1.49e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0780660 | AT4G38180.1 | 36.034 | 580 | 343 | 10 | 25 | 583 | 62 | 634 | 2.23e-117 | 371 |
| Msa0780660 | AT4G15090.1 | 33.641 | 651 | 396 | 10 | 31 | 661 | 50 | 684 | 3.82e-117 | 372 |
| Msa0780660 | AT4G15090.5 | 33.641 | 651 | 396 | 10 | 31 | 661 | 50 | 684 | 3.82e-117 | 372 |
| Msa0780660 | AT4G15090.3 | 33.641 | 651 | 396 | 10 | 31 | 661 | 50 | 684 | 3.82e-117 | 372 |
| Msa0780660 | AT4G15090.2 | 33.641 | 651 | 396 | 10 | 31 | 661 | 50 | 684 | 3.82e-117 | 372 |
| Msa0780660 | AT4G15090.4 | 33.641 | 651 | 396 | 10 | 31 | 661 | 50 | 684 | 3.82e-117 | 372 |
| Msa0780660 | AT1G52520.1 | 34.345 | 626 | 396 | 9 | 17 | 633 | 73 | 692 | 1.48e-111 | 353 |
| Msa0780660 | AT3G22170.2 | 31.699 | 612 | 377 | 7 | 31 | 625 | 69 | 656 | 5.87e-104 | 337 |
| Msa0780660 | AT3G22170.1 | 31.699 | 612 | 377 | 7 | 31 | 625 | 69 | 656 | 5.87e-104 | 337 |
| Msa0780660 | AT1G76320.3 | 32.550 | 596 | 383 | 8 | 36 | 625 | 1 | 583 | 6.40e-101 | 325 |
| Msa0780660 | AT1G76320.1 | 32.550 | 596 | 383 | 8 | 36 | 625 | 1 | 583 | 1.55e-100 | 325 |
| Msa0780660 | AT1G76320.4 | 32.550 | 596 | 383 | 8 | 36 | 625 | 1 | 583 | 1.55e-100 | 325 |
| Msa0780660 | AT1G76320.2 | 32.550 | 596 | 383 | 8 | 36 | 625 | 1 | 583 | 1.60e-100 | 325 |
| Msa0780660 | AT2G27110.2 | 31.621 | 623 | 373 | 14 | 20 | 625 | 34 | 620 | 1.55e-91 | 304 |
| Msa0780660 | AT2G27110.1 | 31.621 | 623 | 373 | 14 | 20 | 625 | 34 | 620 | 1.55e-91 | 304 |
| Msa0780660 | AT1G80010.1 | 31.017 | 590 | 373 | 10 | 21 | 584 | 81 | 662 | 8.25e-90 | 296 |
| Msa0780660 | AT2G32250.5 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 8.84e-88 | 292 |
| Msa0780660 | AT2G32250.6 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 1.98e-87 | 292 |
| Msa0780660 | AT2G32250.1 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 1.98e-87 | 292 |
| Msa0780660 | AT2G32250.3 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 1.98e-87 | 292 |
| Msa0780660 | AT2G32250.2 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 2.17e-87 | 292 |
| Msa0780660 | AT2G32250.4 | 32.450 | 604 | 359 | 12 | 35 | 633 | 41 | 600 | 2.17e-87 | 292 |
| Msa0780660 | AT3G06250.2 | 31.107 | 569 | 349 | 12 | 16 | 581 | 174 | 702 | 4.39e-87 | 290 |
| Msa0780660 | AT3G06250.1 | 31.107 | 569 | 349 | 12 | 16 | 581 | 174 | 702 | 4.39e-87 | 290 |
| Msa0780660 | AT3G06250.3 | 31.107 | 569 | 349 | 12 | 16 | 581 | 174 | 702 | 4.39e-87 | 290 |
| Msa0780660 | AT2G32250.8 | 32.338 | 603 | 359 | 12 | 36 | 633 | 1 | 559 | 7.98e-87 | 290 |
| Msa0780660 | AT2G32250.7 | 32.338 | 603 | 359 | 12 | 36 | 633 | 1 | 559 | 1.17e-86 | 289 |
| Msa0780660 | AT5G18960.2 | 31.304 | 575 | 356 | 13 | 31 | 602 | 210 | 748 | 2.06e-84 | 284 |
| Msa0780660 | AT5G18960.1 | 31.304 | 575 | 356 | 13 | 31 | 602 | 210 | 748 | 2.06e-84 | 284 |
| Msa0780660 | AT2G27110.3 | 35.281 | 445 | 273 | 7 | 184 | 625 | 43 | 475 | 2.00e-83 | 279 |
| Msa0780660 | AT4G19990.3 | 30.602 | 598 | 354 | 10 | 35 | 609 | 24 | 583 | 1.61e-82 | 278 |
| Msa0780660 | AT4G19990.4 | 30.602 | 598 | 354 | 10 | 35 | 609 | 24 | 583 | 1.61e-82 | 278 |
| Msa0780660 | AT4G19990.7 | 29.952 | 631 | 374 | 11 | 2 | 609 | 12 | 597 | 1.65e-82 | 278 |
| Msa0780660 | AT4G19990.5 | 30.602 | 598 | 354 | 10 | 35 | 609 | 24 | 583 | 1.73e-82 | 278 |
| Msa0780660 | AT4G19990.6 | 30.602 | 598 | 354 | 10 | 35 | 609 | 24 | 583 | 2.29e-82 | 278 |
| Msa0780660 | AT4G19990.2 | 30.602 | 598 | 354 | 10 | 35 | 609 | 24 | 583 | 2.29e-82 | 278 |
| Msa0780660 | AT4G19990.1 | 30.783 | 562 | 329 | 9 | 70 | 609 | 3 | 526 | 3.36e-79 | 268 |
| Msa0780660 | AT4G38170.1 | 35.052 | 388 | 241 | 5 | 198 | 583 | 21 | 399 | 6.10e-79 | 263 |
| Msa0780660 | AT1G10240.2 | 27.003 | 574 | 377 | 15 | 32 | 580 | 48 | 604 | 4.85e-55 | 201 |
| Msa0780660 | AT1G10240.1 | 27.003 | 574 | 377 | 15 | 32 | 580 | 48 | 604 | 4.85e-55 | 201 |
| Msa0780660 | AT5G28530.3 | 26.405 | 587 | 377 | 15 | 27 | 580 | 50 | 614 | 8.32e-54 | 197 |
| Msa0780660 | AT5G28530.2 | 26.405 | 587 | 377 | 15 | 27 | 580 | 50 | 614 | 8.32e-54 | 197 |
| Msa0780660 | AT5G28530.1 | 26.565 | 591 | 375 | 17 | 27 | 580 | 50 | 618 | 8.27e-53 | 194 |
| Msa0780660 | AT5G28530.5 | 23.239 | 568 | 356 | 14 | 27 | 580 | 50 | 551 | 5.50e-32 | 132 |
| Msa0780660 | AT5G28530.4 | 23.427 | 572 | 354 | 16 | 27 | 580 | 50 | 555 | 4.08e-31 | 129 |
Find 122 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGAACTTCTTTGAATT+TGG | 0.140264 | 5_2:+62719231 | None:intergenic |
| AACAACGAACAACATTTAAT+TGG | 0.181958 | 5_2:-62720132 | Msa0780660:CDS |
| TAGAGAGTATGCTTTGAAAA+AGG | 0.184139 | 5_2:-62720535 | Msa0780660:CDS |
| CGAGGGAGCACAATTCATTT+TGG | 0.189374 | 5_2:+62719198 | None:intergenic |
| AGAGCTACTTATGAGTATTT+TGG | 0.196188 | 5_2:-62719976 | Msa0780660:CDS |
| AACATTCACAGCTGAAATTA+TGG | 0.211559 | 5_2:+62719068 | None:intergenic |
| CACGCCATAGGTGGTGTTTA+TGG | 0.257699 | 5_2:-62719702 | Msa0780660:CDS |
| TTCATGTAAGGAATGTGTTT+TGG | 0.267954 | 5_2:-62720014 | Msa0780660:CDS |
| ATCTATGTAGAATCATCTAT+TGG | 0.289458 | 5_2:-62718487 | Msa0780660:CDS |
| CTTCAAAGTTATGTTTAATC+AGG | 0.290260 | 5_2:-62719095 | Msa0780660:CDS |
| TAAACAGATGTAATGTTTCA+TGG | 0.300758 | 5_2:+62718792 | None:intergenic |
| ATGAATACAGTGAATATAAA+AGG | 0.301456 | 5_2:-62719648 | Msa0780660:CDS |
| AAAAGGCATGTCATACTTAT+TGG | 0.316105 | 5_2:+62719921 | None:intergenic |
| TTTCTTCTACGACATAGATT+TGG | 0.322024 | 5_2:-62720046 | Msa0780660:CDS |
| AATAGATCGGAAAGTCTTAA+TGG | 0.322660 | 5_2:+62720218 | None:intergenic |
| TGTTCATTGTTTGAGTTTAG+AGG | 0.323985 | 5_2:-62719049 | Msa0780660:CDS |
| GGTATAACTGACATTGTTAA+TGG | 0.331144 | 5_2:-62718755 | Msa0780660:CDS |
| TCTATGTAGAATCATCTATT+GGG | 0.341067 | 5_2:-62718486 | Msa0780660:CDS |
| TGAATTCCAGCACCATTGTT+TGG | 0.354475 | 5_2:+62718710 | None:intergenic |
| CTCTCTGTCATTACTTCGCT+TGG | 0.363489 | 5_2:+62718647 | None:intergenic |
| GTGTTGGAGGAGGTTGTAAT+TGG | 0.369223 | 5_2:-62719139 | Msa0780660:CDS |
| CATGGTCAATCAACATTACT+TGG | 0.375579 | 5_2:-62719874 | Msa0780660:CDS |
| GTCCATTCTCCTTGTAGGCC+TGG | 0.390539 | 5_2:+62720290 | None:intergenic |
| TTGAAACTTCATGGATAGTT+CGG | 0.390728 | 5_2:-62720688 | None:intergenic |
| TGCTAAGATTTGTATTAAGT+TGG | 0.393714 | 5_2:-62720367 | Msa0780660:CDS |
| TTATGCTTCAACATAATGAT+TGG | 0.395255 | 5_2:-62719540 | Msa0780660:CDS |
| TGGAATTCACAGTCCATTGC+GGG | 0.395864 | 5_2:-62718696 | Msa0780660:CDS |
| TATGATACATGCACAACAAC+TGG | 0.402876 | 5_2:-62719598 | Msa0780660:CDS |
| TCATGGCTTCGTTGTATGCT+TGG | 0.405728 | 5_2:-62719799 | Msa0780660:CDS |
| CACCACCTATGGCGTGTTGT+AGG | 0.409794 | 5_2:+62719709 | None:intergenic |
| TGCAAGTCCATTCTCCTTGT+AGG | 0.410253 | 5_2:+62720285 | None:intergenic |
| GCATGTTGGAAGCCTGCAAC+GGG | 0.415038 | 5_2:-62720597 | Msa0780660:CDS |
| ACATCTGTTTAATTCTAGTA+AGG | 0.419633 | 5_2:-62718780 | Msa0780660:CDS |
| CTTTGCTACTTATCATGTGT+TGG | 0.420954 | 5_2:-62719155 | Msa0780660:CDS |
| TGCTACTTATCATGTGTTGG+AGG | 0.424099 | 5_2:-62719152 | Msa0780660:CDS |
| TGTATGAAGAGCGTCATAGA+TGG | 0.424359 | 5_2:-62719507 | Msa0780660:CDS |
| CTTGTTAAAACATACTTCTC+TGG | 0.429704 | 5_2:+62718971 | None:intergenic |
| CTTGGATGTGGGCTGCTCTC+AGG | 0.430764 | 5_2:-62719856 | Msa0780660:CDS |
| AATGTGTAGGAGTGCAATAT+TGG | 0.431270 | 5_2:-62718538 | Msa0780660:intron |
| AAGACACAGAGTCATTTGTT+TGG | 0.441197 | 5_2:-62719831 | Msa0780660:CDS |
| AGCATGCATGCGTTCTTTGA+TGG | 0.449608 | 5_2:-62719424 | Msa0780660:CDS |
| ATTGGGGCTGTCAGTGGCGG+TGG | 0.453398 | 5_2:-62718469 | Msa0780660:CDS |
| CAACATTTAATTGGAAAAGA+AGG | 0.455232 | 5_2:-62720123 | Msa0780660:CDS |
| TAATCCTGAACTAGTACATA+TGG | 0.459180 | 5_2:+62718315 | None:intergenic |
| TGTATTAAGTTGGAAAAGGA+TGG | 0.471002 | 5_2:-62720357 | Msa0780660:CDS |
| GATTTGTATTAAGTTGGAAA+AGG | 0.482043 | 5_2:-62720361 | Msa0780660:CDS |
| CAATCAACATTACTTGGATG+TGG | 0.489796 | 5_2:-62719868 | Msa0780660:CDS |
| TGGCATGAGTATACTCGCCT+TGG | 0.490111 | 5_2:+62719251 | None:intergenic |
| AGTTGGAAAAGGATGGTTTG+TGG | 0.490374 | 5_2:-62720350 | Msa0780660:CDS |
| TCAAATCCAAACAATGGTGC+TGG | 0.496584 | 5_2:-62718716 | Msa0780660:CDS |
| CTCACAAGACCAGGCCTACA+AGG | 0.497964 | 5_2:-62720299 | Msa0780660:CDS |
| ACACCTACAAATGTAGCAAA+AGG | 0.501306 | 5_2:+62719904 | None:intergenic |
| GCATGCATGCGTTCTTTGAT+GGG | 0.501561 | 5_2:-62719423 | Msa0780660:CDS |
| AATTGAAGCCACAGATGGAC+AGG | 0.502360 | 5_2:-62718889 | Msa0780660:CDS |
| ATCTGTGTGTTCACGAGAGA+GGG | 0.507673 | 5_2:-62719005 | Msa0780660:CDS |
| ACCACCTATGGCGTGTTGTA+GGG | 0.509756 | 5_2:+62719710 | None:intergenic |
| ATTCTTGTTTGCACAAGAGA+GGG | 0.511572 | 5_2:-62720453 | Msa0780660:CDS |
| AACTTAATACAAATCTTAGC+AGG | 0.520724 | 5_2:+62720369 | None:intergenic |
| AGAATCTGAAGATGCAACTA+AGG | 0.521210 | 5_2:-62718819 | Msa0780660:CDS |
| CGGGTTAAATGTGAAGATCA+AGG | 0.521428 | 5_2:-62718677 | Msa0780660:CDS |
| TATGCCATAAACACCACCTA+TGG | 0.521771 | 5_2:+62719698 | None:intergenic |
| TACTTATCATGTGTTGGAGG+AGG | 0.523219 | 5_2:-62719149 | Msa0780660:CDS |
| ATCGAAATCAATGATGATGC+AGG | 0.524055 | 5_2:-62720249 | Msa0780660:CDS |
| AACATAATGATTGGTTGAGC+GGG | 0.524706 | 5_2:-62719531 | Msa0780660:CDS |
| GCAAACAAGAATTGCATAGC+AGG | 0.525492 | 5_2:+62720464 | None:intergenic |
| TTGGAGGAGGTTGTAATTGG+AGG | 0.531145 | 5_2:-62719136 | Msa0780660:CDS |
| TGCACAAGAGAGGGGTCTCA+AGG | 0.531486 | 5_2:-62720444 | Msa0780660:CDS |
| AAGCATAAACTTGTCGATGA+AGG | 0.533024 | 5_2:+62719555 | None:intergenic |
| GCTTCGTTGTATGCTTGGAA+AGG | 0.533098 | 5_2:-62719794 | Msa0780660:CDS |
| CTGTTTAATTCTAGTAAGGA+TGG | 0.533343 | 5_2:-62718776 | Msa0780660:CDS |
| TCTTCACATTTAACCCGCAA+TGG | 0.533346 | 5_2:+62718683 | None:intergenic |
| GACCAGGCCTACAAGGAGAA+TGG | 0.534754 | 5_2:-62720292 | Msa0780660:CDS |
| TAGTATTCATGATGAAGGTA+TGG | 0.538379 | 5_2:-62720646 | Msa0780660:CDS |
| CCCTCGTTGAATGTTGTCGA+GGG | 0.543640 | 5_2:-62719181 | Msa0780660:CDS |
| TTGCACAGCCTTACATTGGT+CGG | 0.543937 | 5_2:+62719753 | None:intergenic |
| TGTGTTGTGTTACAGATATG+AGG | 0.545813 | 5_2:-62718349 | Msa0780660:intron |
| TGTGATAGTATTCATGATGA+AGG | 0.546656 | 5_2:-62720651 | Msa0780660:CDS |
| TATTGTGACCGACCAATGTA+AGG | 0.555163 | 5_2:-62719761 | Msa0780660:CDS |
| AGGATCAAGTCTGCGATGGA+AGG | 0.560217 | 5_2:-62719628 | Msa0780660:CDS |
| TTAATTGGAAAAGAAGGTGA+TGG | 0.560896 | 5_2:-62720117 | Msa0780660:CDS |
| CCGCATTGTTGACAATAGAT+CGG | 0.561490 | 5_2:+62720205 | None:intergenic |
| TATCTGTGTGTTCACGAGAG+AGG | 0.565938 | 5_2:-62719006 | Msa0780660:CDS |
| CAACATAATGATTGGTTGAG+CGG | 0.565994 | 5_2:-62719532 | Msa0780660:CDS |
| TAAAAGGATCAAGTCTGCGA+TGG | 0.569182 | 5_2:-62719632 | Msa0780660:CDS |
| TTGTCAAACCTGTCCATCTG+TGG | 0.569297 | 5_2:+62718881 | None:intergenic |
| TCATCTATTGGGGCTGTCAG+TGG | 0.571481 | 5_2:-62718475 | Msa0780660:CDS |
| TGGTCGGTCACAATACCCAC+AGG | 0.573899 | 5_2:+62719769 | None:intergenic |
| TCCCTCGTTGAATGTTGTCG+AGG | 0.574922 | 5_2:-62719182 | Msa0780660:CDS |
| GTATGAAGAGCGTCATAGAT+GGG | 0.575034 | 5_2:-62719506 | Msa0780660:CDS |
| CTGGAATTCACAGTCCATTG+CGG | 0.575404 | 5_2:-62718697 | Msa0780660:CDS |
| AATTCTTGTTTGCACAAGAG+AGG | 0.579543 | 5_2:-62720454 | Msa0780660:CDS |
| CTAGACATTCTCACAAGACC+AGG | 0.579595 | 5_2:-62720308 | Msa0780660:CDS |
| TCCATTGAAAAGCAATTCCA+AGG | 0.582821 | 5_2:-62719268 | Msa0780660:CDS |
| TCTATTGTCAACAATGCGGA+AGG | 0.586150 | 5_2:-62720201 | Msa0780660:CDS |
| AGCATGTTGGAAGCCTGCAA+CGG | 0.586912 | 5_2:-62720598 | Msa0780660:CDS |
| AGTTGCATCTTCAGATTCTG+CGG | 0.590083 | 5_2:+62718823 | None:intergenic |
| CTGATGATGATGAAGCATGT+TGG | 0.601790 | 5_2:-62720611 | Msa0780660:CDS |
| AATCAACATTACTTGGATGT+GGG | 0.607108 | 5_2:-62719867 | Msa0780660:CDS |
| TGTAGGGAAGACTAACTCAA+TGG | 0.612233 | 5_2:+62719726 | None:intergenic |
| CTATGTAGAATCATCTATTG+GGG | 0.614415 | 5_2:-62718485 | Msa0780660:CDS |
| TCTTCCCTACAACACGCCAT+AGG | 0.617216 | 5_2:-62719714 | Msa0780660:CDS |
| GATGACTCAAATCCAAACAA+TGG | 0.622244 | 5_2:-62718722 | Msa0780660:CDS |
| TTCTTGTTTGCACAAGAGAG+GGG | 0.624091 | 5_2:-62720452 | Msa0780660:CDS |
| GCACAAGAGAGGGGTCTCAA+GGG | 0.625092 | 5_2:-62720443 | Msa0780660:CDS |
| TCTATTGGGGCTGTCAGTGG+CGG | 0.627481 | 5_2:-62718472 | Msa0780660:CDS |
| TCCCTACAACACGCCATAGG+TGG | 0.629132 | 5_2:-62719711 | Msa0780660:CDS |
| TATGCTTGGAAAGGCCCCTG+TGG | 0.629326 | 5_2:-62719785 | Msa0780660:CDS |
| GAGAGAATTGAAGCCACAGA+TGG | 0.631735 | 5_2:-62718894 | Msa0780660:CDS |
| TCAATGATGATGCAGGAGTG+AGG | 0.638777 | 5_2:-62720242 | Msa0780660:CDS |
| CCCTCGACAACATTCAACGA+GGG | 0.645738 | 5_2:+62719181 | None:intergenic |
| ATGCTTGGAAAGGCCCCTGT+GGG | 0.652810 | 5_2:-62719784 | Msa0780660:CDS |
| CAAGTAATGTTGATTGACCA+TGG | 0.665568 | 5_2:+62719875 | None:intergenic |
| CAGATAACACATGACAACAC+AGG | 0.666939 | 5_2:+62719023 | None:intergenic |
| CTATTGTCAACAATGCGGAA+GGG | 0.669349 | 5_2:-62720200 | Msa0780660:CDS |
| TTTGTAGGTGTGAATCACCA+TGG | 0.671663 | 5_2:-62719892 | Msa0780660:CDS |
| GTAGGAGTGCAATATTGGAA+TGG | 0.673951 | 5_2:-62718533 | Msa0780660:intron |
| ATGGACGAGTTTGACACACA+CGG | 0.680854 | 5_2:+62719286 | None:intergenic |
| CCGATCTATTGTCAACAATG+CGG | 0.696000 | 5_2:-62720205 | Msa0780660:CDS |
| GGTCGGTCACAATACCCACA+GGG | 0.715217 | 5_2:+62719770 | None:intergenic |
| CATGTTGGAAGCCTGCAACG+GGG | 0.757747 | 5_2:-62720596 | Msa0780660:CDS |
| ACCCTCGACAACATTCAACG+AGG | 0.768012 | 5_2:+62719180 | None:intergenic |
| GTCGGTCACAATACCCACAG+GGG | 0.794872 | 5_2:+62719771 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGTAAGAAAATATTTTT+GGG | - | chr5_2:62719527-62719546 | Msa0780660:CDS | 15.0% |
| !!! | TAGTTAACACAATTTTATAA+TGG | + | chr5_2:62720590-62720609 | None:intergenic | 15.0% |
| !!! | CTTTGTAAGAAAATATTTTT+GGG | - | chr5_2:62719527-62719546 | Msa0780660:CDS | 15.0% |
| !!! | TAGTTAACACAATTTTATAA+TGG | + | chr5_2:62720590-62720609 | None:intergenic | 15.0% |
| !! | TTTAGAAAAATAGCTCATTA+AGG | + | chr5_2:62718917-62718936 | None:intergenic | 20.0% |
| !! | ATGAATACAGTGAATATAAA+AGG | - | chr5_2:62719355-62719374 | Msa0780660:CDS | 20.0% |
| !!! | AAATATTTTCTTACAAAGGT+TGG | + | chr5_2:62719525-62719544 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTACAA+AGG | + | chr5_2:62719529-62719548 | None:intergenic | 20.0% |
| !!! | CCTTTGTAAGAAAATATTTT+TGG | - | chr5_2:62719526-62719545 | Msa0780660:CDS | 20.0% |
| !! | GATGGAAGAAAAATATTAAA+AGG | - | chr5_2:62720054-62720073 | Msa0780660:CDS | 20.0% |
| !! | ATTCAATATACATACATACA+TGG | + | chr5_2:62720425-62720444 | None:intergenic | 20.0% |
| !! | TTAACTAATGTTTGAATTCA+TGG | - | chr5_2:62720603-62720622 | Msa0780660:CDS | 20.0% |
| !! | TTTAGAAAAATAGCTCATTA+AGG | + | chr5_2:62718917-62718936 | None:intergenic | 20.0% |
| !! | ATGAATACAGTGAATATAAA+AGG | - | chr5_2:62719355-62719374 | Msa0780660:CDS | 20.0% |
| !!! | AAATATTTTCTTACAAAGGT+TGG | + | chr5_2:62719525-62719544 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTACAA+AGG | + | chr5_2:62719529-62719548 | None:intergenic | 20.0% |
| !!! | CCTTTGTAAGAAAATATTTT+TGG | - | chr5_2:62719526-62719545 | Msa0780660:CDS | 20.0% |
| !! | GATGGAAGAAAAATATTAAA+AGG | - | chr5_2:62720054-62720073 | Msa0780660:CDS | 20.0% |
| !! | ATTCAATATACATACATACA+TGG | + | chr5_2:62720425-62720444 | None:intergenic | 20.0% |
| !! | TTAACTAATGTTTGAATTCA+TGG | - | chr5_2:62720603-62720622 | Msa0780660:CDS | 20.0% |
| !!! | ACAATTTTTTGTCTTAGATG+GGG | + | chr5_2:62718614-62718633 | None:intergenic | 25.0% |
| !!! | GACAATTTTTTGTCTTAGAT+GGG | + | chr5_2:62718615-62718634 | None:intergenic | 25.0% |
| ! | AACTTAATACAAATCTTAGC+AGG | + | chr5_2:62718637-62718656 | None:intergenic | 25.0% |
| ! | TGCTAAGATTTGTATTAAGT+TGG | - | chr5_2:62718636-62718655 | Msa0780660:intron | 25.0% |
| !!! | GATTTGTATTAAGTTGGAAA+AGG | - | chr5_2:62718642-62718661 | Msa0780660:intron | 25.0% |
| ! | AACAACGAACAACATTTAAT+TGG | - | chr5_2:62718871-62718890 | Msa0780660:CDS | 25.0% |
| ! | CAACATTTAATTGGAAAAGA+AGG | - | chr5_2:62718880-62718899 | Msa0780660:CDS | 25.0% |
| !!! | TGAGCTATTTTTCTAAAATG+AGG | - | chr5_2:62718920-62718939 | Msa0780660:CDS | 25.0% |
| !!! | GAGCTATTTTTCTAAAATGA+GGG | - | chr5_2:62718921-62718940 | Msa0780660:CDS | 25.0% |
| ! | TTATGCTTCAACATAATGAT+TGG | - | chr5_2:62719463-62719482 | Msa0780660:CDS | 25.0% |
| ! | CTTCAAAGTTATGTTTAATC+AGG | - | chr5_2:62719908-62719927 | Msa0780660:CDS | 25.0% |
| !!! | AGAAGTATGTTTTAACAAGA+TGG | - | chr5_2:62720036-62720055 | Msa0780660:CDS | 25.0% |
| ! | TAAACAGATGTAATGTTTCA+TGG | + | chr5_2:62720214-62720233 | None:intergenic | 25.0% |
| ! | ACATCTGTTTAATTCTAGTA+AGG | - | chr5_2:62720223-62720242 | Msa0780660:CDS | 25.0% |
| !!! | TTTTATTTGTCCAAATGTGT+AGG | - | chr5_2:62720452-62720471 | Msa0780660:CDS | 25.0% |
| ! | ATCTATGTAGAATCATCTAT+TGG | - | chr5_2:62720516-62720535 | Msa0780660:CDS | 25.0% |
| ! | TCTATGTAGAATCATCTATT+GGG | - | chr5_2:62720517-62720536 | Msa0780660:CDS | 25.0% |
| !!! | ACAATTTTTTGTCTTAGATG+GGG | + | chr5_2:62718614-62718633 | None:intergenic | 25.0% |
| !!! | GACAATTTTTTGTCTTAGAT+GGG | + | chr5_2:62718615-62718634 | None:intergenic | 25.0% |
| ! | AACTTAATACAAATCTTAGC+AGG | + | chr5_2:62718637-62718656 | None:intergenic | 25.0% |
| ! | TGCTAAGATTTGTATTAAGT+TGG | - | chr5_2:62718636-62718655 | Msa0780660:intron | 25.0% |
| !!! | GATTTGTATTAAGTTGGAAA+AGG | - | chr5_2:62718642-62718661 | Msa0780660:intron | 25.0% |
| ! | AACAACGAACAACATTTAAT+TGG | - | chr5_2:62718871-62718890 | Msa0780660:CDS | 25.0% |
| ! | CAACATTTAATTGGAAAAGA+AGG | - | chr5_2:62718880-62718899 | Msa0780660:CDS | 25.0% |
| !!! | TGAGCTATTTTTCTAAAATG+AGG | - | chr5_2:62718920-62718939 | Msa0780660:CDS | 25.0% |
| !!! | GAGCTATTTTTCTAAAATGA+GGG | - | chr5_2:62718921-62718940 | Msa0780660:CDS | 25.0% |
| ! | TTATGCTTCAACATAATGAT+TGG | - | chr5_2:62719463-62719482 | Msa0780660:CDS | 25.0% |
| ! | CTTCAAAGTTATGTTTAATC+AGG | - | chr5_2:62719908-62719927 | Msa0780660:CDS | 25.0% |
| !!! | AGAAGTATGTTTTAACAAGA+TGG | - | chr5_2:62720036-62720055 | Msa0780660:CDS | 25.0% |
| ! | TAAACAGATGTAATGTTTCA+TGG | + | chr5_2:62720214-62720233 | None:intergenic | 25.0% |
| ! | ACATCTGTTTAATTCTAGTA+AGG | - | chr5_2:62720223-62720242 | Msa0780660:CDS | 25.0% |
| !!! | TTTTATTTGTCCAAATGTGT+AGG | - | chr5_2:62720452-62720471 | Msa0780660:CDS | 25.0% |
| ! | ATCTATGTAGAATCATCTAT+TGG | - | chr5_2:62720516-62720535 | Msa0780660:CDS | 25.0% |
| ! | TCTATGTAGAATCATCTATT+GGG | - | chr5_2:62720517-62720536 | Msa0780660:CDS | 25.0% |
| TGTGATAGTATTCATGATGA+AGG | - | chr5_2:62718352-62718371 | Msa0780660:intron | 30.0% | |
| TAGTATTCATGATGAAGGTA+TGG | - | chr5_2:62718357-62718376 | Msa0780660:intron | 30.0% | |
| !! | TAGAGAGTATGCTTTGAAAA+AGG | - | chr5_2:62718468-62718487 | Msa0780660:CDS | 30.0% |
| !! | AGAGAGTATGCTTTGAAAAA+GGG | - | chr5_2:62718469-62718488 | Msa0780660:CDS | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+CGG | - | chr5_2:62718476-62718495 | Msa0780660:CDS | 30.0% |
| !!! | ATCTCTTTTTTTCGATGTTC+TGG | + | chr5_2:62718509-62718528 | None:intergenic | 30.0% |
| ACATCGAAAAAAAGAGATGA+TGG | - | chr5_2:62718511-62718530 | Msa0780660:CDS | 30.0% | |
| !!! | CAATTTTTTGTCTTAGATGG+GGG | + | chr5_2:62718613-62718632 | None:intergenic | 30.0% |
| !!! | GGACAATTTTTTGTCTTAGA+TGG | + | chr5_2:62718616-62718635 | None:intergenic | 30.0% |
| !! | TGTATTAAGTTGGAAAAGGA+TGG | - | chr5_2:62718646-62718665 | Msa0780660:intron | 30.0% |
| AATAGATCGGAAAGTCTTAA+TGG | + | chr5_2:62718788-62718807 | None:intergenic | 30.0% | |
| !! | ATCATGTCTTTTTCGCAAAA+TGG | + | chr5_2:62718841-62718860 | None:intergenic | 30.0% |
| TTAATTGGAAAAGAAGGTGA+TGG | - | chr5_2:62718886-62718905 | Msa0780660:CDS | 30.0% | |
| TTTCTTCTACGACATAGATT+TGG | - | chr5_2:62718957-62718976 | Msa0780660:CDS | 30.0% | |
| ! | TTCATGTAAGGAATGTGTTT+TGG | - | chr5_2:62718989-62719008 | Msa0780660:CDS | 30.0% |
| ! | TCATGTAAGGAATGTGTTTT+GGG | - | chr5_2:62718990-62719009 | Msa0780660:CDS | 30.0% |
| ! | AGAGCTACTTATGAGTATTT+TGG | - | chr5_2:62719027-62719046 | Msa0780660:CDS | 30.0% |
| ! | AAAAGGCATGTCATACTTAT+TGG | + | chr5_2:62719085-62719104 | None:intergenic | 30.0% |
| AATCAACATTACTTGGATGT+GGG | - | chr5_2:62719136-62719155 | Msa0780660:CDS | 30.0% | |
| !!! | TTGTTTGGCTTTTCAAATCA+TGG | - | chr5_2:62719187-62719206 | Msa0780660:CDS | 30.0% |
| AGCAGAAAAAGAATTTGAAG+CGG | - | chr5_2:62719668-62719687 | Msa0780660:CDS | 30.0% | |
| AGCTTGAACTTCTTTGAATT+TGG | + | chr5_2:62719775-62719794 | None:intergenic | 30.0% | |
| AACATTCACAGCTGAAATTA+TGG | + | chr5_2:62719938-62719957 | None:intergenic | 30.0% | |
| ! | TGTTCATTGTTTGAGTTTAG+AGG | - | chr5_2:62719954-62719973 | Msa0780660:CDS | 30.0% |
| CTTGTTAAAACATACTTCTC+TGG | + | chr5_2:62720035-62720054 | None:intergenic | 30.0% | |
| CTGTTTAATTCTAGTAAGGA+TGG | - | chr5_2:62720227-62720246 | Msa0780660:CDS | 30.0% | |
| GGTATAACTGACATTGTTAA+TGG | - | chr5_2:62720248-62720267 | Msa0780660:CDS | 30.0% | |
| GGAGAATACATAATTTCTGA+AGG | + | chr5_2:62720404-62720423 | None:intergenic | 30.0% | |
| CTATGTAGAATCATCTATTG+GGG | - | chr5_2:62720518-62720537 | Msa0780660:CDS | 30.0% | |
| TGTGATAGTATTCATGATGA+AGG | - | chr5_2:62718352-62718371 | Msa0780660:intron | 30.0% | |
| TAGTATTCATGATGAAGGTA+TGG | - | chr5_2:62718357-62718376 | Msa0780660:intron | 30.0% | |
| !! | TAGAGAGTATGCTTTGAAAA+AGG | - | chr5_2:62718468-62718487 | Msa0780660:CDS | 30.0% |
| !! | AGAGAGTATGCTTTGAAAAA+GGG | - | chr5_2:62718469-62718488 | Msa0780660:CDS | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+CGG | - | chr5_2:62718476-62718495 | Msa0780660:CDS | 30.0% |
| !!! | ATCTCTTTTTTTCGATGTTC+TGG | + | chr5_2:62718509-62718528 | None:intergenic | 30.0% |
| ACATCGAAAAAAAGAGATGA+TGG | - | chr5_2:62718511-62718530 | Msa0780660:CDS | 30.0% | |
| !!! | CAATTTTTTGTCTTAGATGG+GGG | + | chr5_2:62718613-62718632 | None:intergenic | 30.0% |
| !!! | GGACAATTTTTTGTCTTAGA+TGG | + | chr5_2:62718616-62718635 | None:intergenic | 30.0% |
| !! | TGTATTAAGTTGGAAAAGGA+TGG | - | chr5_2:62718646-62718665 | Msa0780660:intron | 30.0% |
| AATAGATCGGAAAGTCTTAA+TGG | + | chr5_2:62718788-62718807 | None:intergenic | 30.0% | |
| !! | ATCATGTCTTTTTCGCAAAA+TGG | + | chr5_2:62718841-62718860 | None:intergenic | 30.0% |
| TTAATTGGAAAAGAAGGTGA+TGG | - | chr5_2:62718886-62718905 | Msa0780660:CDS | 30.0% | |
| TTTCTTCTACGACATAGATT+TGG | - | chr5_2:62718957-62718976 | Msa0780660:CDS | 30.0% | |
| ! | TTCATGTAAGGAATGTGTTT+TGG | - | chr5_2:62718989-62719008 | Msa0780660:CDS | 30.0% |
| ! | TCATGTAAGGAATGTGTTTT+GGG | - | chr5_2:62718990-62719009 | Msa0780660:CDS | 30.0% |
| ! | AGAGCTACTTATGAGTATTT+TGG | - | chr5_2:62719027-62719046 | Msa0780660:CDS | 30.0% |
| ! | AAAAGGCATGTCATACTTAT+TGG | + | chr5_2:62719085-62719104 | None:intergenic | 30.0% |
| AATCAACATTACTTGGATGT+GGG | - | chr5_2:62719136-62719155 | Msa0780660:CDS | 30.0% | |
| !!! | TTGTTTGGCTTTTCAAATCA+TGG | - | chr5_2:62719187-62719206 | Msa0780660:CDS | 30.0% |
| AGCAGAAAAAGAATTTGAAG+CGG | - | chr5_2:62719668-62719687 | Msa0780660:CDS | 30.0% | |
| AGCTTGAACTTCTTTGAATT+TGG | + | chr5_2:62719775-62719794 | None:intergenic | 30.0% | |
| AACATTCACAGCTGAAATTA+TGG | + | chr5_2:62719938-62719957 | None:intergenic | 30.0% | |
| ! | TGTTCATTGTTTGAGTTTAG+AGG | - | chr5_2:62719954-62719973 | Msa0780660:CDS | 30.0% |
| CTTGTTAAAACATACTTCTC+TGG | + | chr5_2:62720035-62720054 | None:intergenic | 30.0% | |
| CTGTTTAATTCTAGTAAGGA+TGG | - | chr5_2:62720227-62720246 | Msa0780660:CDS | 30.0% | |
| GGTATAACTGACATTGTTAA+TGG | - | chr5_2:62720248-62720267 | Msa0780660:CDS | 30.0% | |
| GGAGAATACATAATTTCTGA+AGG | + | chr5_2:62720404-62720423 | None:intergenic | 30.0% | |
| CTATGTAGAATCATCTATTG+GGG | - | chr5_2:62720518-62720537 | Msa0780660:CDS | 30.0% | |
| ! | AATTCTTGTTTGCACAAGAG+AGG | - | chr5_2:62718549-62718568 | Msa0780660:intron | 35.0% |
| ! | ATTCTTGTTTGCACAAGAGA+GGG | - | chr5_2:62718550-62718569 | Msa0780660:intron | 35.0% |
| ! | ATCGAAATCAATGATGATGC+AGG | - | chr5_2:62718754-62718773 | Msa0780660:CDS | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | - | chr5_2:62718977-62718996 | Msa0780660:CDS | 35.0% |
| ! | ATGCCTTTTGCTACATTTGT+AGG | - | chr5_2:62719096-62719115 | Msa0780660:CDS | 35.0% |
| ACACCTACAAATGTAGCAAA+AGG | + | chr5_2:62719102-62719121 | None:intergenic | 35.0% | |
| ! | CAAGTAATGTTGATTGACCA+TGG | + | chr5_2:62719131-62719150 | None:intergenic | 35.0% |
| CATGGTCAATCAACATTACT+TGG | - | chr5_2:62719129-62719148 | Msa0780660:CDS | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | - | chr5_2:62719135-62719154 | Msa0780660:CDS | 35.0% | |
| AAGACACAGAGTCATTTGTT+TGG | - | chr5_2:62719172-62719191 | Msa0780660:CDS | 35.0% | |
| ! | CTGTATTCATTGAGCTTTTC+AGG | + | chr5_2:62719345-62719364 | None:intergenic | 35.0% |
| TATGATACATGCACAACAAC+TGG | - | chr5_2:62719405-62719424 | Msa0780660:CDS | 35.0% | |
| !!! | CAACTGGTTTTGAAGAGAAA+TGG | - | chr5_2:62719421-62719440 | Msa0780660:CDS | 35.0% |
| AAGCATAAACTTGTCGATGA+AGG | + | chr5_2:62719451-62719470 | None:intergenic | 35.0% | |
| ! | CAACATAATGATTGGTTGAG+CGG | - | chr5_2:62719471-62719490 | Msa0780660:CDS | 35.0% |
| ! | AACATAATGATTGGTTGAGC+GGG | - | chr5_2:62719472-62719491 | Msa0780660:CDS | 35.0% |
| !!! | TGAAGCGGATTTTAATTCAC+TGG | - | chr5_2:62719683-62719702 | Msa0780660:CDS | 35.0% |
| TCCATTGAAAAGCAATTCCA+AGG | - | chr5_2:62719735-62719754 | Msa0780660:CDS | 35.0% | |
| ! | GAGCACAATTCATTTTGGAT+AGG | + | chr5_2:62719803-62719822 | None:intergenic | 35.0% |
| ! | CTTTGCTACTTATCATGTGT+TGG | - | chr5_2:62719848-62719867 | Msa0780660:CDS | 35.0% |
| AGAATCTGAAGATGCAACTA+AGG | - | chr5_2:62720184-62720203 | Msa0780660:CDS | 35.0% | |
| GATGACTCAAATCCAAACAA+TGG | - | chr5_2:62720281-62720300 | Msa0780660:CDS | 35.0% | |
| ATATTGCACTCCTACACATT+TGG | + | chr5_2:62720465-62720484 | None:intergenic | 35.0% | |
| ! | AATGTGTAGGAGTGCAATAT+TGG | - | chr5_2:62720465-62720484 | Msa0780660:CDS | 35.0% |
| TGTGTTGTGTTACAGATATG+AGG | - | chr5_2:62720654-62720673 | Msa0780660:CDS | 35.0% | |
| ! | AATTCTTGTTTGCACAAGAG+AGG | - | chr5_2:62718549-62718568 | Msa0780660:intron | 35.0% |
| ! | ATTCTTGTTTGCACAAGAGA+GGG | - | chr5_2:62718550-62718569 | Msa0780660:intron | 35.0% |
| ! | ATCGAAATCAATGATGATGC+AGG | - | chr5_2:62718754-62718773 | Msa0780660:CDS | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | - | chr5_2:62718977-62718996 | Msa0780660:CDS | 35.0% |
| ! | ATGCCTTTTGCTACATTTGT+AGG | - | chr5_2:62719096-62719115 | Msa0780660:CDS | 35.0% |
| ACACCTACAAATGTAGCAAA+AGG | + | chr5_2:62719102-62719121 | None:intergenic | 35.0% | |
| ! | CAAGTAATGTTGATTGACCA+TGG | + | chr5_2:62719131-62719150 | None:intergenic | 35.0% |
| CATGGTCAATCAACATTACT+TGG | - | chr5_2:62719129-62719148 | Msa0780660:CDS | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | - | chr5_2:62719135-62719154 | Msa0780660:CDS | 35.0% | |
| AAGACACAGAGTCATTTGTT+TGG | - | chr5_2:62719172-62719191 | Msa0780660:CDS | 35.0% | |
| ! | CTGTATTCATTGAGCTTTTC+AGG | + | chr5_2:62719345-62719364 | None:intergenic | 35.0% |
| TATGATACATGCACAACAAC+TGG | - | chr5_2:62719405-62719424 | Msa0780660:CDS | 35.0% | |
| !!! | CAACTGGTTTTGAAGAGAAA+TGG | - | chr5_2:62719421-62719440 | Msa0780660:CDS | 35.0% |
| AAGCATAAACTTGTCGATGA+AGG | + | chr5_2:62719451-62719470 | None:intergenic | 35.0% | |
| ! | CAACATAATGATTGGTTGAG+CGG | - | chr5_2:62719471-62719490 | Msa0780660:CDS | 35.0% |
| ! | AACATAATGATTGGTTGAGC+GGG | - | chr5_2:62719472-62719491 | Msa0780660:CDS | 35.0% |
| !!! | TGAAGCGGATTTTAATTCAC+TGG | - | chr5_2:62719683-62719702 | Msa0780660:CDS | 35.0% |
| TCCATTGAAAAGCAATTCCA+AGG | - | chr5_2:62719735-62719754 | Msa0780660:CDS | 35.0% | |
| ! | GAGCACAATTCATTTTGGAT+AGG | + | chr5_2:62719803-62719822 | None:intergenic | 35.0% |
| ! | CTTTGCTACTTATCATGTGT+TGG | - | chr5_2:62719848-62719867 | Msa0780660:CDS | 35.0% |
| AGAATCTGAAGATGCAACTA+AGG | - | chr5_2:62720184-62720203 | Msa0780660:CDS | 35.0% | |
| GATGACTCAAATCCAAACAA+TGG | - | chr5_2:62720281-62720300 | Msa0780660:CDS | 35.0% | |
| ATATTGCACTCCTACACATT+TGG | + | chr5_2:62720465-62720484 | None:intergenic | 35.0% | |
| ! | AATGTGTAGGAGTGCAATAT+TGG | - | chr5_2:62720465-62720484 | Msa0780660:CDS | 35.0% |
| TGTGTTGTGTTACAGATATG+AGG | - | chr5_2:62720654-62720673 | Msa0780660:CDS | 35.0% | |
| ! | CTGATGATGATGAAGCATGT+TGG | - | chr5_2:62718392-62718411 | Msa0780660:intron | 40.0% |
| !! | CTTTGAAAAAGGGTTTTCGG+TGG | - | chr5_2:62718479-62718498 | Msa0780660:CDS | 40.0% |
| GCAAACAAGAATTGCATAGC+AGG | + | chr5_2:62718542-62718561 | None:intergenic | 40.0% | |
| ! | TTCTTGTTTGCACAAGAGAG+GGG | - | chr5_2:62718551-62718570 | Msa0780660:intron | 40.0% |
| AGTTGGAAAAGGATGGTTTG+TGG | - | chr5_2:62718653-62718672 | Msa0780660:intron | 40.0% | |
| CCGCATTGTTGACAATAGAT+CGG | + | chr5_2:62718801-62718820 | None:intergenic | 40.0% | |
| CCGATCTATTGTCAACAATG+CGG | - | chr5_2:62718798-62718817 | Msa0780660:CDS | 40.0% | |
| TCTATTGTCAACAATGCGGA+AGG | - | chr5_2:62718802-62718821 | Msa0780660:CDS | 40.0% | |
| CTATTGTCAACAATGCGGAA+GGG | - | chr5_2:62718803-62718822 | Msa0780660:CDS | 40.0% | |
| TTTGTAGGTGTGAATCACCA+TGG | - | chr5_2:62719111-62719130 | Msa0780660:CDS | 40.0% | |
| TATTGTGACCGACCAATGTA+AGG | - | chr5_2:62719242-62719261 | Msa0780660:CDS | 40.0% | |
| ! | CATTTTGCACAGCCTTACAT+TGG | + | chr5_2:62719257-62719276 | None:intergenic | 40.0% |
| TGTAGGGAAGACTAACTCAA+TGG | + | chr5_2:62719280-62719299 | None:intergenic | 40.0% | |
| TATGCCATAAACACCACCTA+TGG | + | chr5_2:62719308-62719327 | None:intergenic | 40.0% | |
| TAAAAGGATCAAGTCTGCGA+TGG | - | chr5_2:62719371-62719390 | Msa0780660:CDS | 40.0% | |
| !! | TGTATGAAGAGCGTCATAGA+TGG | - | chr5_2:62719496-62719515 | Msa0780660:CDS | 40.0% |
| !! | GTATGAAGAGCGTCATAGAT+GGG | - | chr5_2:62719497-62719516 | Msa0780660:CDS | 40.0% |
| !! | GCCTTGGAATTGCTTTTCAA+TGG | + | chr5_2:62719739-62719758 | None:intergenic | 40.0% |
| ! | TGCTACTTATCATGTGTTGG+AGG | - | chr5_2:62719851-62719870 | Msa0780660:CDS | 40.0% |
| TACTTATCATGTGTTGGAGG+AGG | - | chr5_2:62719854-62719873 | Msa0780660:CDS | 40.0% | |
| CAGATAACACATGACAACAC+AGG | + | chr5_2:62719983-62720002 | None:intergenic | 40.0% | |
| AGTTGCATCTTCAGATTCTG+CGG | + | chr5_2:62720183-62720202 | None:intergenic | 40.0% | |
| TCAAATCCAAACAATGGTGC+TGG | - | chr5_2:62720287-62720306 | Msa0780660:CDS | 40.0% | |
| TGAATTCCAGCACCATTGTT+TGG | + | chr5_2:62720296-62720315 | None:intergenic | 40.0% | |
| TCTTCACATTTAACCCGCAA+TGG | + | chr5_2:62720323-62720342 | None:intergenic | 40.0% | |
| CGGGTTAAATGTGAAGATCA+AGG | - | chr5_2:62720326-62720345 | Msa0780660:CDS | 40.0% | |
| ! | GTAGGAGTGCAATATTGGAA+TGG | - | chr5_2:62720470-62720489 | Msa0780660:CDS | 40.0% |
| ! | CTGATGATGATGAAGCATGT+TGG | - | chr5_2:62718392-62718411 | Msa0780660:intron | 40.0% |
| !! | CTTTGAAAAAGGGTTTTCGG+TGG | - | chr5_2:62718479-62718498 | Msa0780660:CDS | 40.0% |
| GCAAACAAGAATTGCATAGC+AGG | + | chr5_2:62718542-62718561 | None:intergenic | 40.0% | |
| ! | TTCTTGTTTGCACAAGAGAG+GGG | - | chr5_2:62718551-62718570 | Msa0780660:intron | 40.0% |
| AGTTGGAAAAGGATGGTTTG+TGG | - | chr5_2:62718653-62718672 | Msa0780660:intron | 40.0% | |
| CCGCATTGTTGACAATAGAT+CGG | + | chr5_2:62718801-62718820 | None:intergenic | 40.0% | |
| CCGATCTATTGTCAACAATG+CGG | - | chr5_2:62718798-62718817 | Msa0780660:CDS | 40.0% | |
| TCTATTGTCAACAATGCGGA+AGG | - | chr5_2:62718802-62718821 | Msa0780660:CDS | 40.0% | |
| CTATTGTCAACAATGCGGAA+GGG | - | chr5_2:62718803-62718822 | Msa0780660:CDS | 40.0% | |
| TTTGTAGGTGTGAATCACCA+TGG | - | chr5_2:62719111-62719130 | Msa0780660:CDS | 40.0% | |
| TATTGTGACCGACCAATGTA+AGG | - | chr5_2:62719242-62719261 | Msa0780660:CDS | 40.0% | |
| ! | CATTTTGCACAGCCTTACAT+TGG | + | chr5_2:62719257-62719276 | None:intergenic | 40.0% |
| TGTAGGGAAGACTAACTCAA+TGG | + | chr5_2:62719280-62719299 | None:intergenic | 40.0% | |
| TATGCCATAAACACCACCTA+TGG | + | chr5_2:62719308-62719327 | None:intergenic | 40.0% | |
| TAAAAGGATCAAGTCTGCGA+TGG | - | chr5_2:62719371-62719390 | Msa0780660:CDS | 40.0% | |
| !! | TGTATGAAGAGCGTCATAGA+TGG | - | chr5_2:62719496-62719515 | Msa0780660:CDS | 40.0% |
| !! | GTATGAAGAGCGTCATAGAT+GGG | - | chr5_2:62719497-62719516 | Msa0780660:CDS | 40.0% |
| !! | GCCTTGGAATTGCTTTTCAA+TGG | + | chr5_2:62719739-62719758 | None:intergenic | 40.0% |
| ! | TGCTACTTATCATGTGTTGG+AGG | - | chr5_2:62719851-62719870 | Msa0780660:CDS | 40.0% |
| TACTTATCATGTGTTGGAGG+AGG | - | chr5_2:62719854-62719873 | Msa0780660:CDS | 40.0% | |
| CAGATAACACATGACAACAC+AGG | + | chr5_2:62719983-62720002 | None:intergenic | 40.0% | |
| AGTTGCATCTTCAGATTCTG+CGG | + | chr5_2:62720183-62720202 | None:intergenic | 40.0% | |
| TCAAATCCAAACAATGGTGC+TGG | - | chr5_2:62720287-62720306 | Msa0780660:CDS | 40.0% | |
| TGAATTCCAGCACCATTGTT+TGG | + | chr5_2:62720296-62720315 | None:intergenic | 40.0% | |
| TCTTCACATTTAACCCGCAA+TGG | + | chr5_2:62720323-62720342 | None:intergenic | 40.0% | |
| CGGGTTAAATGTGAAGATCA+AGG | - | chr5_2:62720326-62720345 | Msa0780660:CDS | 40.0% | |
| ! | GTAGGAGTGCAATATTGGAA+TGG | - | chr5_2:62720470-62720489 | Msa0780660:CDS | 40.0% |
| CTAGACATTCTCACAAGACC+AGG | - | chr5_2:62718695-62718714 | Msa0780660:CDS | 45.0% | |
| TGCAAGTCCATTCTCCTTGT+AGG | + | chr5_2:62718721-62718740 | None:intergenic | 45.0% | |
| ! | TCAATGATGATGCAGGAGTG+AGG | - | chr5_2:62718761-62718780 | Msa0780660:CDS | 45.0% |
| TCATGGCTTCGTTGTATGCT+TGG | - | chr5_2:62719204-62719223 | Msa0780660:CDS | 45.0% | |
| GCTTCGTTGTATGCTTGGAA+AGG | - | chr5_2:62719209-62719228 | Msa0780660:CDS | 45.0% | |
| TTGCACAGCCTTACATTGGT+CGG | + | chr5_2:62719253-62719272 | None:intergenic | 45.0% | |
| AGCATGCATGCGTTCTTTGA+TGG | - | chr5_2:62719579-62719598 | Msa0780660:CDS | 45.0% | |
| GCATGCATGCGTTCTTTGAT+GGG | - | chr5_2:62719580-62719599 | Msa0780660:CDS | 45.0% | |
| ATGGACGAGTTTGACACACA+CGG | + | chr5_2:62719720-62719739 | None:intergenic | 45.0% | |
| !! | CGAGGGAGCACAATTCATTT+TGG | + | chr5_2:62719808-62719827 | None:intergenic | 45.0% |
| GTGTTGGAGGAGGTTGTAAT+TGG | - | chr5_2:62719864-62719883 | Msa0780660:CDS | 45.0% | |
| TTGGAGGAGGTTGTAATTGG+AGG | - | chr5_2:62719867-62719886 | Msa0780660:CDS | 45.0% | |
| TATCTGTGTGTTCACGAGAG+AGG | - | chr5_2:62719997-62720016 | Msa0780660:CDS | 45.0% | |
| ATCTGTGTGTTCACGAGAGA+GGG | - | chr5_2:62719998-62720017 | Msa0780660:CDS | 45.0% | |
| GAGAGAATTGAAGCCACAGA+TGG | - | chr5_2:62720109-62720128 | Msa0780660:CDS | 45.0% | |
| AATTGAAGCCACAGATGGAC+AGG | - | chr5_2:62720114-62720133 | Msa0780660:CDS | 45.0% | |
| TTGTCAAACCTGTCCATCTG+TGG | + | chr5_2:62720125-62720144 | None:intergenic | 45.0% | |
| CTGGAATTCACAGTCCATTG+CGG | - | chr5_2:62720306-62720325 | Msa0780660:CDS | 45.0% | |
| TGGAATTCACAGTCCATTGC+GGG | - | chr5_2:62720307-62720326 | Msa0780660:CDS | 45.0% | |
| CTCTCTGTCATTACTTCGCT+TGG | + | chr5_2:62720359-62720378 | None:intergenic | 45.0% | |
| CAAGCGAAGTAATGACAGAG+AGG | - | chr5_2:62720357-62720376 | Msa0780660:CDS | 45.0% | |
| TGAATTCATGGTCGAGTGTG+TGG | - | chr5_2:62720615-62720634 | Msa0780660:CDS | 45.0% | |
| CTAGACATTCTCACAAGACC+AGG | - | chr5_2:62718695-62718714 | Msa0780660:CDS | 45.0% | |
| TGCAAGTCCATTCTCCTTGT+AGG | + | chr5_2:62718721-62718740 | None:intergenic | 45.0% | |
| ! | TCAATGATGATGCAGGAGTG+AGG | - | chr5_2:62718761-62718780 | Msa0780660:CDS | 45.0% |
| TCATGGCTTCGTTGTATGCT+TGG | - | chr5_2:62719204-62719223 | Msa0780660:CDS | 45.0% | |
| GCTTCGTTGTATGCTTGGAA+AGG | - | chr5_2:62719209-62719228 | Msa0780660:CDS | 45.0% | |
| TTGCACAGCCTTACATTGGT+CGG | + | chr5_2:62719253-62719272 | None:intergenic | 45.0% | |
| AGCATGCATGCGTTCTTTGA+TGG | - | chr5_2:62719579-62719598 | Msa0780660:CDS | 45.0% | |
| GCATGCATGCGTTCTTTGAT+GGG | - | chr5_2:62719580-62719599 | Msa0780660:CDS | 45.0% | |
| ATGGACGAGTTTGACACACA+CGG | + | chr5_2:62719720-62719739 | None:intergenic | 45.0% | |
| !! | CGAGGGAGCACAATTCATTT+TGG | + | chr5_2:62719808-62719827 | None:intergenic | 45.0% |
| GTGTTGGAGGAGGTTGTAAT+TGG | - | chr5_2:62719864-62719883 | Msa0780660:CDS | 45.0% | |
| TTGGAGGAGGTTGTAATTGG+AGG | - | chr5_2:62719867-62719886 | Msa0780660:CDS | 45.0% | |
| TATCTGTGTGTTCACGAGAG+AGG | - | chr5_2:62719997-62720016 | Msa0780660:CDS | 45.0% | |
| ATCTGTGTGTTCACGAGAGA+GGG | - | chr5_2:62719998-62720017 | Msa0780660:CDS | 45.0% | |
| GAGAGAATTGAAGCCACAGA+TGG | - | chr5_2:62720109-62720128 | Msa0780660:CDS | 45.0% | |
| AATTGAAGCCACAGATGGAC+AGG | - | chr5_2:62720114-62720133 | Msa0780660:CDS | 45.0% | |
| TTGTCAAACCTGTCCATCTG+TGG | + | chr5_2:62720125-62720144 | None:intergenic | 45.0% | |
| CTGGAATTCACAGTCCATTG+CGG | - | chr5_2:62720306-62720325 | Msa0780660:CDS | 45.0% | |
| TGGAATTCACAGTCCATTGC+GGG | - | chr5_2:62720307-62720326 | Msa0780660:CDS | 45.0% | |
| CTCTCTGTCATTACTTCGCT+TGG | + | chr5_2:62720359-62720378 | None:intergenic | 45.0% | |
| CAAGCGAAGTAATGACAGAG+AGG | - | chr5_2:62720357-62720376 | Msa0780660:CDS | 45.0% | |
| TGAATTCATGGTCGAGTGTG+TGG | - | chr5_2:62720615-62720634 | Msa0780660:CDS | 45.0% | |
| AGCATGTTGGAAGCCTGCAA+CGG | - | chr5_2:62718405-62718424 | Msa0780660:intron | 50.0% | |
| GGGGGTGACTTTAACGTACA+TGG | + | chr5_2:62718595-62718614 | None:intergenic | 50.0% | |
| TCTTCCCTACAACACGCCAT+AGG | - | chr5_2:62719289-62719308 | Msa0780660:CDS | 50.0% | |
| ACCACCTATGGCGTGTTGTA+GGG | + | chr5_2:62719296-62719315 | None:intergenic | 50.0% | |
| CACGCCATAGGTGGTGTTTA+TGG | - | chr5_2:62719301-62719320 | Msa0780660:CDS | 50.0% | |
| AGGATCAAGTCTGCGATGGA+AGG | - | chr5_2:62719375-62719394 | Msa0780660:CDS | 50.0% | |
| TGGCATGAGTATACTCGCCT+TGG | + | chr5_2:62719755-62719774 | None:intergenic | 50.0% | |
| TCCCTCGTTGAATGTTGTCG+AGG | - | chr5_2:62719821-62719840 | Msa0780660:CDS | 50.0% | |
| CCCTCGACAACATTCAACGA+GGG | + | chr5_2:62719825-62719844 | None:intergenic | 50.0% | |
| CCCTCGTTGAATGTTGTCGA+GGG | - | chr5_2:62719822-62719841 | Msa0780660:CDS | 50.0% | |
| ACCCTCGACAACATTCAACG+AGG | + | chr5_2:62719826-62719845 | None:intergenic | 50.0% | |
| TCATCTATTGGGGCTGTCAG+TGG | - | chr5_2:62720528-62720547 | Msa0780660:CDS | 50.0% | |
| !!! | TGTCAGTGGCGGTGGTTTTT+TGG | - | chr5_2:62720542-62720561 | Msa0780660:CDS | 50.0% |
| AGCATGTTGGAAGCCTGCAA+CGG | - | chr5_2:62718405-62718424 | Msa0780660:intron | 50.0% | |
| GGGGGTGACTTTAACGTACA+TGG | + | chr5_2:62718595-62718614 | None:intergenic | 50.0% | |
| TCTTCCCTACAACACGCCAT+AGG | - | chr5_2:62719289-62719308 | Msa0780660:CDS | 50.0% | |
| ACCACCTATGGCGTGTTGTA+GGG | + | chr5_2:62719296-62719315 | None:intergenic | 50.0% | |
| CACGCCATAGGTGGTGTTTA+TGG | - | chr5_2:62719301-62719320 | Msa0780660:CDS | 50.0% | |
| AGGATCAAGTCTGCGATGGA+AGG | - | chr5_2:62719375-62719394 | Msa0780660:CDS | 50.0% | |
| TGGCATGAGTATACTCGCCT+TGG | + | chr5_2:62719755-62719774 | None:intergenic | 50.0% | |
| TCCCTCGTTGAATGTTGTCG+AGG | - | chr5_2:62719821-62719840 | Msa0780660:CDS | 50.0% | |
| CCCTCGACAACATTCAACGA+GGG | + | chr5_2:62719825-62719844 | None:intergenic | 50.0% | |
| CCCTCGTTGAATGTTGTCGA+GGG | - | chr5_2:62719822-62719841 | Msa0780660:CDS | 50.0% | |
| ACCCTCGACAACATTCAACG+AGG | + | chr5_2:62719826-62719845 | None:intergenic | 50.0% | |
| TCATCTATTGGGGCTGTCAG+TGG | - | chr5_2:62720528-62720547 | Msa0780660:CDS | 50.0% | |
| !!! | TGTCAGTGGCGGTGGTTTTT+TGG | - | chr5_2:62720542-62720561 | Msa0780660:CDS | 50.0% |
| GCATGTTGGAAGCCTGCAAC+GGG | - | chr5_2:62718406-62718425 | Msa0780660:intron | 55.0% | |
| CATGTTGGAAGCCTGCAACG+GGG | - | chr5_2:62718407-62718426 | Msa0780660:intron | 55.0% | |
| GAAAAACGCATCCCCGTTGC+AGG | + | chr5_2:62718421-62718440 | None:intergenic | 55.0% | |
| TGCACAAGAGAGGGGTCTCA+AGG | - | chr5_2:62718559-62718578 | Msa0780660:intron | 55.0% | |
| GCACAAGAGAGGGGTCTCAA+GGG | - | chr5_2:62718560-62718579 | Msa0780660:intron | 55.0% | |
| CTCACAAGACCAGGCCTACA+AGG | - | chr5_2:62718704-62718723 | Msa0780660:CDS | 55.0% | |
| GACCAGGCCTACAAGGAGAA+TGG | - | chr5_2:62718711-62718730 | Msa0780660:CDS | 55.0% | |
| GTCCATTCTCCTTGTAGGCC+TGG | + | chr5_2:62718716-62718735 | None:intergenic | 55.0% | |
| TATGCTTGGAAAGGCCCCTG+TGG | - | chr5_2:62719218-62719237 | Msa0780660:CDS | 55.0% | |
| ATGCTTGGAAAGGCCCCTGT+GGG | - | chr5_2:62719219-62719238 | Msa0780660:CDS | 55.0% | |
| GTCGGTCACAATACCCACAG+GGG | + | chr5_2:62719235-62719254 | None:intergenic | 55.0% | |
| GGTCGGTCACAATACCCACA+GGG | + | chr5_2:62719236-62719255 | None:intergenic | 55.0% | |
| TGGTCGGTCACAATACCCAC+AGG | + | chr5_2:62719237-62719256 | None:intergenic | 55.0% | |
| TCCCTACAACACGCCATAGG+TGG | - | chr5_2:62719292-62719311 | Msa0780660:CDS | 55.0% | |
| CACCACCTATGGCGTGTTGT+AGG | + | chr5_2:62719297-62719316 | None:intergenic | 55.0% | |
| TCTATTGGGGCTGTCAGTGG+CGG | - | chr5_2:62720531-62720550 | Msa0780660:CDS | 55.0% | |
| GCATGTTGGAAGCCTGCAAC+GGG | - | chr5_2:62718406-62718425 | Msa0780660:intron | 55.0% | |
| CATGTTGGAAGCCTGCAACG+GGG | - | chr5_2:62718407-62718426 | Msa0780660:intron | 55.0% | |
| GAAAAACGCATCCCCGTTGC+AGG | + | chr5_2:62718421-62718440 | None:intergenic | 55.0% | |
| TGCACAAGAGAGGGGTCTCA+AGG | - | chr5_2:62718559-62718578 | Msa0780660:intron | 55.0% | |
| GCACAAGAGAGGGGTCTCAA+GGG | - | chr5_2:62718560-62718579 | Msa0780660:intron | 55.0% | |
| CTCACAAGACCAGGCCTACA+AGG | - | chr5_2:62718704-62718723 | Msa0780660:CDS | 55.0% | |
| GACCAGGCCTACAAGGAGAA+TGG | - | chr5_2:62718711-62718730 | Msa0780660:CDS | 55.0% | |
| GTCCATTCTCCTTGTAGGCC+TGG | + | chr5_2:62718716-62718735 | None:intergenic | 55.0% | |
| TATGCTTGGAAAGGCCCCTG+TGG | - | chr5_2:62719218-62719237 | Msa0780660:CDS | 55.0% | |
| ATGCTTGGAAAGGCCCCTGT+GGG | - | chr5_2:62719219-62719238 | Msa0780660:CDS | 55.0% | |
| GTCGGTCACAATACCCACAG+GGG | + | chr5_2:62719235-62719254 | None:intergenic | 55.0% | |
| GGTCGGTCACAATACCCACA+GGG | + | chr5_2:62719236-62719255 | None:intergenic | 55.0% | |
| TGGTCGGTCACAATACCCAC+AGG | + | chr5_2:62719237-62719256 | None:intergenic | 55.0% | |
| TCCCTACAACACGCCATAGG+TGG | - | chr5_2:62719292-62719311 | Msa0780660:CDS | 55.0% | |
| CACCACCTATGGCGTGTTGT+AGG | + | chr5_2:62719297-62719316 | None:intergenic | 55.0% | |
| TCTATTGGGGCTGTCAGTGG+CGG | - | chr5_2:62720531-62720550 | Msa0780660:CDS | 55.0% | |
| ! | CTTGGATGTGGGCTGCTCTC+AGG | - | chr5_2:62719147-62719166 | Msa0780660:CDS | 60.0% |
| ! | CTTGGATGTGGGCTGCTCTC+AGG | - | chr5_2:62719147-62719166 | Msa0780660:CDS | 60.0% |
| ATTGGGGCTGTCAGTGGCGG+TGG | - | chr5_2:62720534-62720553 | Msa0780660:CDS | 65.0% | |
| ATTGGGGCTGTCAGTGGCGG+TGG | - | chr5_2:62720534-62720553 | Msa0780660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 62718325 | 62720700 | 62718325 | ID=Msa0780660;Name=Msa0780660 |
| chr5_2 | mRNA | 62718325 | 62720700 | 62718325 | ID=Msa0780660-mRNA-1;Parent=Msa0780660;Name=Msa0780660-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|722 |
| chr5_2 | exon | 62718661 | 62720700 | 62718661 | ID=Msa0780660-mRNA-1:exon:18549;Parent=Msa0780660-mRNA-1 |
| chr5_2 | exon | 62718455 | 62718551 | 62718455 | ID=Msa0780660-mRNA-1:exon:18548;Parent=Msa0780660-mRNA-1 |
| chr5_2 | exon | 62718325 | 62718356 | 62718325 | ID=Msa0780660-mRNA-1:exon:18547;Parent=Msa0780660-mRNA-1 |
| chr5_2 | CDS | 62718661 | 62720700 | 62718661 | ID=Msa0780660-mRNA-1:cds;Parent=Msa0780660-mRNA-1 |
| chr5_2 | CDS | 62718455 | 62718551 | 62718455 | ID=Msa0780660-mRNA-1:cds;Parent=Msa0780660-mRNA-1 |
| chr5_2 | CDS | 62718325 | 62718356 | 62718325 | ID=Msa0780660-mRNA-1:cds;Parent=Msa0780660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
