Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781120 | G7K0M6 | 61.307 | 199 | 48 | 3 | 39 | 211 | 75 | 270 | 4.73e-71 | 227 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0781120 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781120 | MtrunA17_Chr5g0448221 | 61.307 | 199 | 48 | 3 | 39 | 211 | 75 | 270 | 9.11e-75 | 227 |
| Msa0781120 | MtrunA17_Chr5g0441121 | 94.737 | 38 | 2 | 0 | 1 | 38 | 138 | 175 | 3.92e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 45 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGACGATGATTCAAATTT+TGG | 0.107022 | 5_2:-63539551 | Msa0781120:CDS |
| ATACCCCTCCATTCCCTTTC+AGG | 0.219356 | 5_2:+63539662 | None:intergenic |
| GTGACCATATAAGGCCTTAT+TGG | 0.260984 | 5_2:+63539697 | None:intergenic |
| CCATCCAATAAGGCCTTATA+TGG | 0.323281 | 5_2:-63539701 | Msa0781120:CDS |
| AGATCTCATGTGACCATATA+AGG | 0.346698 | 5_2:+63539688 | None:intergenic |
| TGCAATTCTTCTAATGATAG+TGG | 0.351010 | 5_2:-63539758 | Msa0781120:CDS |
| AATCCCATCTTCAAGCTCTA+AGG | 0.358194 | 5_2:-63539814 | Msa0781120:CDS |
| TTTAGGTGTGGAAAAGCATT+AGG | 0.374848 | 5_2:-63539848 | Msa0781120:intron |
| AAGGAATTTCCCATCCAATA+AGG | 0.388634 | 5_2:-63539711 | Msa0781120:CDS |
| CTTTCCTTAGAGCTTGAAGA+TGG | 0.421663 | 5_2:+63539810 | None:intergenic |
| CCTAACAAGGATAAAACTAT+TGG | 0.425854 | 5_2:-63539635 | Msa0781120:CDS |
| TGCCTTTCGACCCACTTCAT+TGG | 0.432116 | 5_2:+63547027 | None:intergenic |
| CCTGGTACAAGTGGTCTTGT+TGG | 0.433511 | 5_2:-63539375 | Msa0781120:CDS |
| GCATAAACTTGACAGGATAT+CGG | 0.436704 | 5_2:-63547062 | Msa0781120:CDS |
| TAAGTTGTGATGTTTGCAAA+AGG | 0.456655 | 5_2:-63539730 | Msa0781120:CDS |
| TACCCCTCCATTCCCTTTCA+GGG | 0.465209 | 5_2:+63539663 | None:intergenic |
| CCATATAAGGCCTTATTGGA+TGG | 0.492046 | 5_2:+63539701 | None:intergenic |
| CGCAAGGATCTGCTTTAATG+AGG | 0.501615 | 5_2:-63546997 | Msa0781120:CDS |
| CATGAGATCTCACCCTGAAA+GGG | 0.502988 | 5_2:-63539675 | Msa0781120:CDS |
| TGCCATCATAAGTTCCACTT+TGG | 0.505420 | 5_2:+63539234 | None:intergenic |
| TTCGGATGACGAGGATAAGA+AGG | 0.520435 | 5_2:-63539409 | Msa0781120:CDS |
| ACATGAGATCTCACCCTGAA+AGG | 0.521597 | 5_2:-63539676 | Msa0781120:CDS |
| TGCAACGCTTACCAATGAAG+TGG | 0.525538 | 5_2:-63547038 | Msa0781120:CDS |
| TGACAACTTCAATGCAGATT+CGG | 0.527965 | 5_2:-63539427 | Msa0781120:CDS |
| AGAATGACAATAACAAAAGA+AGG | 0.532053 | 5_2:-63539329 | Msa0781120:CDS |
| TACCAAAGTGGAACTTATGA+TGG | 0.540351 | 5_2:-63539236 | None:intergenic |
| CCAACAAGACCACTTGTACC+AGG | 0.547377 | 5_2:+63539375 | None:intergenic |
| AAACCTTGCATAAACTTGAC+AGG | 0.558222 | 5_2:-63547069 | Msa0781120:CDS |
| TCTTCAAGCTCTAAGGAAAG+AGG | 0.559146 | 5_2:-63539807 | Msa0781120:CDS |
| CATATAAGGCCTTATTGGAT+GGG | 0.559243 | 5_2:+63539702 | None:intergenic |
| GATCTCACCCTGAAAGGGAA+TGG | 0.563550 | 5_2:-63539670 | Msa0781120:CDS |
| TTTCCTTAGAGCTTGAAGAT+GGG | 0.564421 | 5_2:+63539811 | None:intergenic |
| TATCCTGTCAAGTTTATGCA+AGG | 0.568206 | 5_2:+63547066 | None:intergenic |
| TACCAATGAAGTGGGTCGAA+AGG | 0.577252 | 5_2:-63547029 | Msa0781120:CDS |
| TCACCCTGAAAGGGAATGGA+GGG | 0.580204 | 5_2:-63539666 | Msa0781120:CDS |
| CTCACCCTGAAAGGGAATGG+AGG | 0.583418 | 5_2:-63539667 | Msa0781120:CDS |
| CTTCAAGCTCTAAGGAAAGA+GGG | 0.588989 | 5_2:-63539806 | Msa0781120:CDS |
| CGAAAGGCATCAATCTCGCA+AGG | 0.609004 | 5_2:-63547013 | Msa0781120:CDS |
| GCAAGGATCTGCTTTAATGA+GGG | 0.618221 | 5_2:-63546996 | Msa0781120:CDS |
| CAATGCAGATTCGGATGACG+AGG | 0.631053 | 5_2:-63539418 | Msa0781120:CDS |
| GCAACGCTTACCAATGAAGT+GGG | 0.639331 | 5_2:-63547037 | Msa0781120:CDS |
| CACCCTGAAAGGGAATGGAG+GGG | 0.655548 | 5_2:-63539665 | Msa0781120:CDS |
| GAGGGGTATGTATCCTAACA+AGG | 0.657117 | 5_2:-63539648 | Msa0781120:CDS |
| GGGTGGTGAGTTGAAAACAA+AGG | 0.680456 | 5_2:-63539786 | Msa0781120:CDS |
| CAAGCTCTAAGGAAAGAGGG+TGG | 0.721260 | 5_2:-63539803 | Msa0781120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAAAATAAATAAAA+AGG | + | chr5_2:63539938-63539957 | None:intergenic | 0.0% |
| !!! | ATTATTTTTTTAATTTTTTT+AGG | - | chr5_2:63544789-63544808 | Msa0781120:intron | 0.0% |
| !! | TAAATAAAATAATAATATAA+AGG | + | chr5_2:63546228-63546247 | None:intergenic | 0.0% |
| !!! | ATTTTTAATTTTTACTCTTT+TGG | + | chr5_2:63544248-63544267 | None:intergenic | 10.0% |
| !!! | ATTTGTTTTTAAAACAATTA+GGG | + | chr5_2:63544665-63544684 | None:intergenic | 10.0% |
| !!! | AAATATATTAGACTTTTTTT+TGG | - | chr5_2:63544824-63544843 | Msa0781120:intron | 10.0% |
| !!! | TATAATTTTAATCAAAATCA+AGG | + | chr5_2:63544964-63544983 | None:intergenic | 10.0% |
| !! | AAACTAAATAATTAAGATTA+AGG | - | chr5_2:63545618-63545637 | Msa0781120:intron | 10.0% |
| !!! | AATTTTGTAACAAATTTTTT+AGG | - | chr5_2:63546447-63546466 | Msa0781120:intron | 10.0% |
| !!! | TTATTTTTTCTAAAATGTGT+TGG | - | chr5_2:63540181-63540200 | Msa0781120:intron | 15.0% |
| !! | ACAAATTTGAATTAATCTAT+AGG | + | chr5_2:63540220-63540239 | None:intergenic | 15.0% |
| !!! | TTTGTTTCTTCTATTAAAAT+TGG | - | chr5_2:63540235-63540254 | Msa0781120:intron | 15.0% |
| !!! | TATTGAGTTTTCTTTTTATA+AGG | + | chr5_2:63541022-63541041 | None:intergenic | 15.0% |
| !!! | ATTTTTCAACATTTTCATTA+TGG | - | chr5_2:63541876-63541895 | Msa0781120:intron | 15.0% |
| !!! | TTTTTCAACATTTTCATTAT+GGG | - | chr5_2:63541877-63541896 | Msa0781120:intron | 15.0% |
| !!! | AATATTCTTTCATTTTGATT+CGG | + | chr5_2:63543665-63543684 | None:intergenic | 15.0% |
| !!! | TCACATTTTTAAAAAGATAA+AGG | + | chr5_2:63543820-63543839 | None:intergenic | 15.0% |
| !! | CGATTTAAAAAAAAAGATAA+AGG | - | chr5_2:63543952-63543971 | Msa0781120:intron | 15.0% |
| !!! | GTTCTTAATTTTTAATTTTG+AGG | + | chr5_2:63544018-63544037 | None:intergenic | 15.0% |
| !!! | TTATCCAATCTTTTTTTATT+AGG | + | chr5_2:63544087-63544106 | None:intergenic | 15.0% |
| !!! | AATTAAAAATTCCTATTTTG+TGG | - | chr5_2:63544258-63544277 | Msa0781120:intron | 15.0% |
| !!! | AAATATTTTTTTTTCCTGAA+AGG | - | chr5_2:63544306-63544325 | Msa0781120:intron | 15.0% |
| !!! | AAGGTTTTTATATAAAATGT+TGG | + | chr5_2:63544423-63544442 | None:intergenic | 15.0% |
| !!! | GATTTGTTTTTAAAACAATT+AGG | + | chr5_2:63544666-63544685 | None:intergenic | 15.0% |
| !! | TTTATGTTAACCAAATAATT+GGG | + | chr5_2:63544754-63544773 | None:intergenic | 15.0% |
| !! | ATTTATGTTAACCAAATAAT+TGG | + | chr5_2:63544755-63544774 | None:intergenic | 15.0% |
| !! | TATTATTGAAAAGATAAGTT+TGG | + | chr5_2:63545028-63545047 | None:intergenic | 15.0% |
| !! | CTTAAAAATTCATATGAAAA+TGG | + | chr5_2:63545299-63545318 | None:intergenic | 15.0% |
| !!! | TTCATGATTTTATTTTCTTA+TGG | - | chr5_2:63545326-63545345 | Msa0781120:intron | 15.0% |
| !!! | ATCTTTTTTTCATTTCAATT+TGG | + | chr5_2:63545263-63545282 | None:intergenic | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | - | chr5_2:63545448-63545467 | Msa0781120:intron | 15.0% |
| !! | AAATGTAACAAAAATCAAAT+TGG | - | chr5_2:63545667-63545686 | Msa0781120:intron | 15.0% |
| !! | AAAAAATTTATGCATGAAAT+AGG | - | chr5_2:63545769-63545788 | Msa0781120:intron | 15.0% |
| !! | AAAAATTTATGCATGAAATA+GGG | - | chr5_2:63545770-63545789 | Msa0781120:intron | 15.0% |
| !! | ATAATTTACAAAGAAAAAGT+AGG | + | chr5_2:63546134-63546153 | None:intergenic | 15.0% |
| !!! | TACTTTTTCTTTGTAAATTA+TGG | - | chr5_2:63546133-63546152 | Msa0781120:intron | 15.0% |
| !! | AATATTACAACAAATGAACA+TGG | - | chr5_2:63539640-63539659 | Msa0781120:CDS | 20.0% |
| !! | AATAAATAAAAAGGTAAAGC+AGG | + | chr5_2:63539929-63539948 | None:intergenic | 20.0% |
| !! | ACGAAATAGAATCAATATAT+AGG | - | chr5_2:63540446-63540465 | Msa0781120:intron | 20.0% |
| !!! | ATATTGTTTATCAAAAGTGT+CGG | + | chr5_2:63540723-63540742 | None:intergenic | 20.0% |
| !! | TCTTTAAATTCATGCTAAAT+GGG | + | chr5_2:63540879-63540898 | None:intergenic | 20.0% |
| !! | ATCTTTAAATTCATGCTAAA+TGG | + | chr5_2:63540880-63540899 | None:intergenic | 20.0% |
| !! | GTAAACTAAATGTTTAGTAT+TGG | + | chr5_2:63540949-63540968 | None:intergenic | 20.0% |
| !! | TTGATATGAGATAATAGATT+TGG | - | chr5_2:63541608-63541627 | Msa0781120:intron | 20.0% |
| !!! | TTTTCAACATTTTCATTATG+GGG | - | chr5_2:63541878-63541897 | Msa0781120:intron | 20.0% |
| !! | TAATTAAGGTTTAAGGAAAT+TGG | + | chr5_2:63542230-63542249 | None:intergenic | 20.0% |
| !!! | TTTTAATCATCATTCTGATT+TGG | - | chr5_2:63542566-63542585 | Msa0781120:intron | 20.0% |
| !! | TTTAATCATCATTCTGATTT+GGG | - | chr5_2:63542567-63542586 | Msa0781120:intron | 20.0% |
| !!! | TTGTTATGGTTTAATACTTT+TGG | + | chr5_2:63543765-63543784 | None:intergenic | 20.0% |
| !!! | GTCTTTATTTTCATTTGTTT+TGG | - | chr5_2:63543846-63543865 | Msa0781120:intron | 20.0% |
| !!! | AGTCATTTGTCTTTTTAAAA+AGG | + | chr5_2:63543899-63543918 | None:intergenic | 20.0% |
| !! | TCATCCTAATAAAAAAAGAT+TGG | - | chr5_2:63544080-63544099 | Msa0781120:intron | 20.0% |
| !!! | AAGATTGGATAATTTTTGTT+TGG | - | chr5_2:63544095-63544114 | Msa0781120:intron | 20.0% |
| !!! | GTTTTTATATAAAATGTTGG+TGG | + | chr5_2:63544420-63544439 | None:intergenic | 20.0% |
| !! | TGTAATTTGACTAGATAATA+AGG | + | chr5_2:63544526-63544545 | None:intergenic | 20.0% |
| !! | ATATAAGATAAAGCCATAAA+GGG | + | chr5_2:63544637-63544656 | None:intergenic | 20.0% |
| !! | AATATAAGATAAAGCCATAA+AGG | + | chr5_2:63544638-63544657 | None:intergenic | 20.0% |
| !!! | TAGATCATTGTTTTTTGTTT+TGG | - | chr5_2:63544714-63544733 | Msa0781120:intron | 20.0% |
| !!! | AACATTTTTATGGTCAAATT+TGG | - | chr5_2:63545131-63545150 | Msa0781120:intron | 20.0% |
| !!! | CTAAAACAGTCTATTTTTTT+TGG | - | chr5_2:63545187-63545206 | Msa0781120:intron | 20.0% |
| !!! | TTTATTTTCTTATGGTCTTT+CGG | - | chr5_2:63545334-63545353 | Msa0781120:intron | 20.0% |
| !!! | TTAATACTTTTATGCAAACA+TGG | + | chr5_2:63545382-63545401 | None:intergenic | 20.0% |
| !! | CTTGAAAATGTATATGAAAA+TGG | - | chr5_2:63545410-63545429 | Msa0781120:intron | 20.0% |
| !!! | CTTAATTTTAGGTAACAATT+TGG | + | chr5_2:63545475-63545494 | None:intergenic | 20.0% |
| !!! | TTAGTCTCTAACTTAATTTT+AGG | + | chr5_2:63545486-63545505 | None:intergenic | 20.0% |
| !!! | TGTTTTCAACAAAAAAGTTA+AGG | - | chr5_2:63545643-63545662 | Msa0781120:intron | 20.0% |
| !! | AAGAATAATGAGAAATTAAG+AGG | + | chr5_2:63545863-63545882 | None:intergenic | 20.0% |
| !! | AGTTTATGATAAACCAAAAA+TGG | - | chr5_2:63546377-63546396 | Msa0781120:intron | 20.0% |
| !!! | TTGTTTTTAGATATTGAACA+TGG | + | chr5_2:63547033-63547052 | None:intergenic | 20.0% |
| ! | GTTTAGTAGAATAAAAAGAG+AGG | + | chr5_2:63539392-63539411 | None:intergenic | 25.0% |
| !!! | TTATCATTACTCGCTTTTTA+CGG | - | chr5_2:63539422-63539441 | Msa0781120:CDS | 25.0% |
| !!! | CTTATTTTTTTGTAAGCCAA+AGG | - | chr5_2:63539463-63539482 | Msa0781120:intron | 25.0% |
| ! | TGGAAAATATTTGTTTGGAT+TGG | + | chr5_2:63539529-63539548 | None:intergenic | 25.0% |
| ! | GTGTATGGAAAATATTTGTT+TGG | + | chr5_2:63539534-63539553 | None:intergenic | 25.0% |
| ! | CTTTAGACTAAATGATTAAG+AGG | - | chr5_2:63539571-63539590 | Msa0781120:CDS | 25.0% |
| ! | ATTCAATTTAGTATCGTAAG+TGG | + | chr5_2:63539609-63539628 | None:intergenic | 25.0% |
| ! | ACAATTTGTATGTGCTAAAA+CGG | + | chr5_2:63540143-63540162 | None:intergenic | 25.0% |
| ! | ATGCAATACAAACTTGATAT+AGG | + | chr5_2:63540307-63540326 | None:intergenic | 25.0% |
| !!! | TATTTTGAATCTTAGAGAGT+TGG | - | chr5_2:63540414-63540433 | Msa0781120:intron | 25.0% |
| ! | TTAGCATGAATTTAAAGATG+TGG | - | chr5_2:63540881-63540900 | Msa0781120:intron | 25.0% |
| ! | AATTTAAAGATGTGGTGTAT+CGG | - | chr5_2:63540889-63540908 | Msa0781120:intron | 25.0% |
| !!! | AATACAGTTGGTAAGAAAAT+TGG | + | chr5_2:63541053-63541072 | None:intergenic | 25.0% |
| ! | AGAAGAACTGAAAGTTAAAT+TGG | + | chr5_2:63541157-63541176 | None:intergenic | 25.0% |
| !! | ATGAGATAATAGATTTGGTA+TGG | - | chr5_2:63541613-63541632 | Msa0781120:intron | 25.0% |
| ! | CTAATATGAGATTGTAGATT+TGG | - | chr5_2:63541760-63541779 | Msa0781120:intron | 25.0% |
| !! | TTTTTATGTGATTTGAACAC+TGG | - | chr5_2:63541503-63541522 | Msa0781120:intron | 25.0% |
| !!! | GCTTTTGTTATACACTATAA+AGG | - | chr5_2:63541828-63541847 | Msa0781120:intron | 25.0% |
| ! | TGTTCTACTATCGAATATTA+CGG | + | chr5_2:63542157-63542176 | None:intergenic | 25.0% |
| ! | TTTCCTTAAACCTTAATTAC+TGG | - | chr5_2:63542231-63542250 | Msa0781120:intron | 25.0% |
| ! | AATCCAGTAATTAAGGTTTA+AGG | + | chr5_2:63542237-63542256 | None:intergenic | 25.0% |
| !! | CAATTTTTGTGAGTTTTTCA+TGG | - | chr5_2:63542356-63542375 | Msa0781120:intron | 25.0% |
| ! | GATTATTGTGTATTGTATAC+CGG | - | chr5_2:63542378-63542397 | Msa0781120:intron | 25.0% |
| ! | ATACACTTAAAATGAACACT+TGG | - | chr5_2:63542659-63542678 | Msa0781120:intron | 25.0% |
| ! | CCAAATCTACAATCATATAT+CGG | + | chr5_2:63542885-63542904 | None:intergenic | 25.0% |
| !! | ATATGATTGTAGATTTGGTA+TGG | - | chr5_2:63542887-63542906 | Msa0781120:intron | 25.0% |
| ! | ATGATATGTGATTGTAGATT+TGG | - | chr5_2:63543032-63543051 | Msa0781120:intron | 25.0% |
| ! | ATGATATGTGATTGTAGATT+TGG | - | chr5_2:63543032-63543051 | Msa0781120:intron | 25.0% |
| ! | TTTGTGAGAACTTATGAAAA+CGG | - | chr5_2:63543292-63543311 | Msa0781120:intron | 25.0% |
| ! | TTTAGCATAAAGTTATTTGC+AGG | + | chr5_2:63543427-63543446 | None:intergenic | 25.0% |
| !!! | AAGTTGTTTTTTTTGGTAAG+TGG | + | chr5_2:63543519-63543538 | None:intergenic | 25.0% |
| !!! | CTTACTGAAGTTGTTTTTTT+TGG | + | chr5_2:63543526-63543545 | None:intergenic | 25.0% |
| !!! | TTTAATACTTTTGGTGTTAG+GGG | + | chr5_2:63543756-63543775 | None:intergenic | 25.0% |
| !!! | GTTTAATACTTTTGGTGTTA+GGG | + | chr5_2:63543757-63543776 | None:intergenic | 25.0% |
| !!! | AGGATTATTTTGAAACGTTA+GGG | + | chr5_2:63543800-63543819 | None:intergenic | 25.0% |
| !!! | AAGGATTATTTTGAAACGTT+AGG | + | chr5_2:63543801-63543820 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTGGTATGACAAA+AGG | - | chr5_2:63543858-63543877 | Msa0781120:intron | 25.0% |
| ! | GATAAAGGACGATTTAAAAA+AGG | - | chr5_2:63543967-63543986 | Msa0781120:intron | 25.0% |
| !!! | TATTTTTTTTTCCTGAAAGG+AGG | - | chr5_2:63544309-63544328 | Msa0781120:intron | 25.0% |
| ! | CCATAAAAATGTTATTGTGT+TGG | + | chr5_2:63545124-63545143 | None:intergenic | 25.0% |
| !! | CCAACACAATAACATTTTTA+TGG | - | chr5_2:63545121-63545140 | Msa0781120:intron | 25.0% |
| ! | TTATGGTCAAATTTGGTTAA+AGG | - | chr5_2:63545138-63545157 | Msa0781120:intron | 25.0% |
| !! | TGGTTAAAGGTATAATTGAT+AGG | - | chr5_2:63545151-63545170 | Msa0781120:intron | 25.0% |
| ! | TTACCTAAAATAAAGTTCAG+GGG | + | chr5_2:63545230-63545249 | None:intergenic | 25.0% |
| ! | GTTACCTAAAATAAAGTTCA+GGG | + | chr5_2:63545231-63545250 | None:intergenic | 25.0% |
| ! | TGTTACCTAAAATAAAGTTC+AGG | + | chr5_2:63545232-63545251 | None:intergenic | 25.0% |
| ! | TCATATGAAAATGGATCAAA+AGG | + | chr5_2:63545290-63545309 | None:intergenic | 25.0% |
| ! | GTATATGAAAATGGACAAAA+AGG | - | chr5_2:63545419-63545438 | Msa0781120:intron | 25.0% |
| ! | AAATAGAGAATCAAGTTAAG+AGG | - | chr5_2:63545837-63545856 | Msa0781120:intron | 25.0% |
| ! | TTGCAATTCATTGTAGTAAA+GGG | + | chr5_2:63545955-63545974 | None:intergenic | 25.0% |
| ! | ATTGCAATTCATTGTAGTAA+AGG | + | chr5_2:63545956-63545975 | None:intergenic | 25.0% |
| ! | AAAAAGAAGAAGTTCAACAA+AGG | - | chr5_2:63545980-63545999 | Msa0781120:intron | 25.0% |
| ! | AAAAGAAGAAGTTCAACAAA+GGG | - | chr5_2:63545981-63546000 | Msa0781120:intron | 25.0% |
| ! | TCACAAAAGTTATCACAAAT+TGG | + | chr5_2:63546042-63546061 | None:intergenic | 25.0% |
| ! | ACTATCCTATTGAAAGAAAA+GGG | + | chr5_2:63546284-63546303 | None:intergenic | 25.0% |
| ! | TACTATCCTATTGAAAGAAA+AGG | + | chr5_2:63546285-63546304 | None:intergenic | 25.0% |
| !! | TTTTCTTTCAATAGGATAGT+AGG | - | chr5_2:63546284-63546303 | Msa0781120:intron | 25.0% |
| ! | TTTCTTTCAATAGGATAGTA+GGG | - | chr5_2:63546285-63546304 | Msa0781120:intron | 25.0% |
| !! | TAAACTTTTCTTCTTCTCTA+TGG | + | chr5_2:63546326-63546345 | None:intergenic | 25.0% |
| !!! | TGTAACAAATTTTTTAGGTG+TGG | - | chr5_2:63546452-63546471 | Msa0781120:intron | 25.0% |
| !! | CAAATCTTTTGAATTGATTG+CGG | + | chr5_2:63546738-63546757 | None:intergenic | 25.0% |
| ! | AGAATGACAATAACAAAAGA+AGG | - | chr5_2:63546983-63547002 | Msa0781120:CDS | 25.0% |
| ! | ATCTAAAAACAACATCTTGT+TGG | - | chr5_2:63547041-63547060 | Msa0781120:CDS | 25.0% |
| TAAATGGATCTTAGTTACCT+CGG | + | chr5_2:63539498-63539517 | None:intergenic | 30.0% | |
| GAGAGACATTTGGATAATAT+GGG | + | chr5_2:63539895-63539914 | None:intergenic | 30.0% | |
| TGAGAGACATTTGGATAATA+TGG | + | chr5_2:63539896-63539915 | None:intergenic | 30.0% | |
| TAAGAACATTTGAGAAAGCA+CGG | + | chr5_2:63539980-63539999 | None:intergenic | 30.0% | |
| CACACAATGAGAATTTGAAA+TGG | + | chr5_2:63540261-63540280 | None:intergenic | 30.0% | |
| TAGGACCAAATAATTGACAA+CGG | + | chr5_2:63540288-63540307 | None:intergenic | 30.0% | |
| !!! | ATGCTAAATGGGTTGTTTTT+TGG | + | chr5_2:63540868-63540887 | None:intergenic | 30.0% |
| ATGTTGAATGAAATGCAAAG+CGG | + | chr5_2:63541123-63541142 | None:intergenic | 30.0% | |
| ! | TTTTCATTACATAGCGACTA+TGG | + | chr5_2:63541194-63541213 | None:intergenic | 30.0% |
| CTGATATGAGTTTGTAGATT+TGG | - | chr5_2:63541305-63541324 | Msa0781120:intron | 30.0% | |
| ! | ATGAGTTTGTAGATTTGGTA+TGG | - | chr5_2:63541310-63541329 | Msa0781120:intron | 30.0% |
| ATTCTCAAAACAAACAAAGC+AGG | + | chr5_2:63541404-63541423 | None:intergenic | 30.0% | |
| CTGATATGAGATTGTAGATT+TGG | - | chr5_2:63541459-63541478 | Msa0781120:intron | 30.0% | |
| ! | ATGAGATTGTAGATTTGGTA+TGG | - | chr5_2:63541464-63541483 | Msa0781120:intron | 30.0% |
| AAGGGAAACATCTTCTTTAT+GGG | - | chr5_2:63541912-63541931 | Msa0781120:intron | 30.0% | |
| CCAATGTACTTAAGATAGAA+CGG | + | chr5_2:63541982-63542001 | None:intergenic | 30.0% | |
| !! | ATGTTTTGTTCTAGTGAGAA+AGG | + | chr5_2:63542016-63542035 | None:intergenic | 30.0% |
| !! | TTTTTATTTCCTTGCGTCAT+GGG | + | chr5_2:63542193-63542212 | None:intergenic | 30.0% |
| !!! | TTTTTTATTTCCTTGCGTCA+TGG | + | chr5_2:63542194-63542213 | None:intergenic | 30.0% |
| CATCATCAATCCAGTAATTA+AGG | + | chr5_2:63542244-63542263 | None:intergenic | 30.0% | |
| !! | TACTGGATTGATGATGTTAA+TGG | - | chr5_2:63542248-63542267 | Msa0781120:intron | 30.0% |
| ATGCAAAGAATTTACAGCTA+TGG | + | chr5_2:63542282-63542301 | None:intergenic | 30.0% | |
| AATTCTTTGCATGTGTTCTT+AGG | - | chr5_2:63542290-63542309 | Msa0781120:intron | 30.0% | |
| ! | TTGACAGTTGTTGTTAGAAT+CGG | + | chr5_2:63542339-63542358 | None:intergenic | 30.0% |
| TAAAACACACTCTGATATTC+CGG | + | chr5_2:63542400-63542419 | None:intergenic | 30.0% | |
| ATGAGATTGTAGATTTCGTA+TGG | - | chr5_2:63542434-63542453 | Msa0781120:intron | 30.0% | |
| !! | TTGGGATTGTAGATTTGTTA+TGG | - | chr5_2:63542585-63542604 | Msa0781120:intron | 30.0% |
| CTGATATGTGATTGTAGATT+TGG | - | chr5_2:63542732-63542751 | Msa0781120:intron | 30.0% | |
| ! | ATGTGATTGTAGATTTGGTA+TGG | - | chr5_2:63542737-63542756 | Msa0781120:intron | 30.0% |
| !!! | AACACTTGCTTTGTTTGTTT+TGG | - | chr5_2:63541851-63541870 | Msa0781120:intron | 30.0% |
| CCGATATATGATTGTAGATT+TGG | - | chr5_2:63542882-63542901 | Msa0781120:intron | 30.0% | |
| ! | ATGTGATTGTAGATTTGGTA+TGG | - | chr5_2:63542737-63542756 | Msa0781120:intron | 30.0% |
| ! | ATGTGATTGTAGATTTGGTA+TGG | - | chr5_2:63542737-63542756 | Msa0781120:intron | 30.0% |
| GCTGTTTATATAAGCTATCT+TGG | + | chr5_2:63543366-63543385 | None:intergenic | 30.0% | |
| GCGTTTATGTATAAGCTTAT+TGG | + | chr5_2:63543466-63543485 | None:intergenic | 30.0% | |
| !!! | TTAATACTTTTGGTGTTAGG+GGG | + | chr5_2:63543755-63543774 | None:intergenic | 30.0% |
| !!! | GGTTTAATACTTTTGGTGTT+AGG | + | chr5_2:63543758-63543777 | None:intergenic | 30.0% |
| ! | GGAATGAAGAGTTTTTGTTA+TGG | + | chr5_2:63543779-63543798 | None:intergenic | 30.0% |
| GAAAAACTCAACCAAACAAA+AGG | + | chr5_2:63544062-63544081 | None:intergenic | 30.0% | |
| CAATCTTTCTTCCACAAAAT+AGG | + | chr5_2:63544272-63544291 | None:intergenic | 30.0% | |
| ! | CTATTTTGTGGAAGAAAGAT+TGG | - | chr5_2:63544270-63544289 | Msa0781120:intron | 30.0% |
| GAAGAAAGATTGGATTAAAG+TGG | - | chr5_2:63544280-63544299 | Msa0781120:intron | 30.0% | |
| ACTAGATAATAAGGTGAATG+AGG | + | chr5_2:63544517-63544536 | None:intergenic | 30.0% | |
| GAATAACCAATAACCCTTTA+TGG | - | chr5_2:63544621-63544640 | Msa0781120:intron | 30.0% | |
| ATAAAGCCATAAAGGGTTAT+TGG | + | chr5_2:63544630-63544649 | None:intergenic | 30.0% | |
| ! | TCGTAGATCTTCTTTTTCTT+CGG | - | chr5_2:63545573-63545592 | Msa0781120:intron | 30.0% |
| ! | TTTTCTTCGGAATGTTTCTT+TGG | - | chr5_2:63545586-63545605 | Msa0781120:intron | 30.0% |
| TAAAACATAGAGGAGTTGAA+AGG | + | chr5_2:63545907-63545926 | None:intergenic | 30.0% | |
| TGCAATTCATTGTAGTAAAG+GGG | + | chr5_2:63545954-63545973 | None:intergenic | 30.0% | |
| TTCAACAAAGGGTTACATAA+AGG | - | chr5_2:63545992-63546011 | Msa0781120:intron | 30.0% | |
| ACTTTATCTCTCTATCACTT+TGG | - | chr5_2:63546094-63546113 | Msa0781120:intron | 30.0% | |
| CCATTTGTTTGACAACTTAT+GGG | + | chr5_2:63546163-63546182 | None:intergenic | 30.0% | |
| ACCATTTGTTTGACAACTTA+TGG | + | chr5_2:63546164-63546183 | None:intergenic | 30.0% | |
| ATTACCGATATATACCTTAG+AGG | + | chr5_2:63546202-63546221 | None:intergenic | 30.0% | |
| ATTGAAAGAAAAGGGTAAAG+AGG | + | chr5_2:63546276-63546295 | None:intergenic | 30.0% | |
| ! | CTTTACCCTTTTCTTTCAAT+AGG | - | chr5_2:63546276-63546295 | Msa0781120:intron | 30.0% |
| !! | AACATGATGATGACCATTTT+TGG | + | chr5_2:63546393-63546412 | None:intergenic | 30.0% |
| TGCAATTCTTCTAATGATAG+TGG | - | chr5_2:63546554-63546573 | Msa0781120:intron | 30.0% | |
| TAAGTTGTGATGTTTGCAAA+AGG | - | chr5_2:63546582-63546601 | Msa0781120:intron | 30.0% | |
| !!! | CCAATAGTTTTATCCTTGTT+AGG | + | chr5_2:63546680-63546699 | None:intergenic | 30.0% |
| CCTAACAAGGATAAAACTAT+TGG | - | chr5_2:63546677-63546696 | Msa0781120:intron | 30.0% | |
| ! | ATCGACGATGATTCAAATTT+TGG | - | chr5_2:63546761-63546780 | Msa0781120:intron | 30.0% |
| ! | AAGAAGGAGAATATTTTACC+TGG | - | chr5_2:63546919-63546938 | Msa0781120:intron | 30.0% |
| ! | AATATTTTACCTGGTACAAG+TGG | - | chr5_2:63546928-63546947 | Msa0781120:intron | 30.0% |
| TAACAAAAGAAGGAAAAAGC+TGG | - | chr5_2:63546993-63547012 | Msa0781120:CDS | 30.0% | |
| !! | AAAAAGATTTGCTACCAAAG+TGG | - | chr5_2:63547064-63547083 | Msa0781120:CDS | 30.0% |
| AAACCTTGCATAAACTTGAC+AGG | - | chr5_2:63539243-63539262 | Msa0781120:CDS | 35.0% | |
| TATCCTGTCAAGTTTATGCA+AGG | + | chr5_2:63539249-63539268 | None:intergenic | 35.0% | |
| GCATAAACTTGACAGGATAT+CGG | - | chr5_2:63539250-63539269 | Msa0781120:CDS | 35.0% | |
| AAATGGATCTTAGTTACCTC+GGG | + | chr5_2:63539497-63539516 | None:intergenic | 35.0% | |
| GGTAACTAAGATCCATTTAG+AGG | - | chr5_2:63539499-63539518 | Msa0781120:intron | 35.0% | |
| ! | CAAATATTTTCCATACACGC+TGG | - | chr5_2:63539536-63539555 | Msa0781120:intron | 35.0% |
| ! | ATGATGATGAACCAAGATCA+TGG | - | chr5_2:63539707-63539726 | Msa0781120:CDS | 35.0% |
| ACGAAAAGAAACCATGATCT+TGG | + | chr5_2:63539721-63539740 | None:intergenic | 35.0% | |
| CATTTGGATAATATGGGTAG+AGG | + | chr5_2:63539889-63539908 | None:intergenic | 35.0% | |
| TTGATGAGATGAGAGACATT+TGG | + | chr5_2:63539905-63539924 | None:intergenic | 35.0% | |
| AGTATGTAGTGTGTTGTCTT+TGG | + | chr5_2:63540019-63540038 | None:intergenic | 35.0% | |
| CTACGTCCTTTCTATAATTG+AGG | - | chr5_2:63540058-63540077 | Msa0781120:intron | 35.0% | |
| CGGTAACCTCAATTATAGAA+AGG | + | chr5_2:63540067-63540086 | None:intergenic | 35.0% | |
| ! | GTAGAGAAAGTGTACTAAGT+CGG | + | chr5_2:63540087-63540106 | None:intergenic | 35.0% |
| GAATCCCGTTGTCAATTATT+TGG | - | chr5_2:63540280-63540299 | Msa0781120:intron | 35.0% | |
| AGGACCAAATAATTGACAAC+GGG | + | chr5_2:63540287-63540306 | None:intergenic | 35.0% | |
| TTATGGGGATACTATGTTCA+AGG | - | chr5_2:63541893-63541912 | Msa0781120:intron | 35.0% | |
| TATGGGGATACTATGTTCAA+GGG | - | chr5_2:63541894-63541913 | Msa0781120:intron | 35.0% | |
| CAAGGGAAACATCTTCTTTA+TGG | - | chr5_2:63541911-63541930 | Msa0781120:intron | 35.0% | |
| AGGGAAACATCTTCTTTATG+GGG | - | chr5_2:63541913-63541932 | Msa0781120:intron | 35.0% | |
| CCGTTCTATCTTAAGTACAT+TGG | - | chr5_2:63541979-63541998 | Msa0781120:intron | 35.0% | |
| CAATTTGTCTACCTCGTTAA+CGG | - | chr5_2:63542099-63542118 | Msa0781120:intron | 35.0% | |
| ! | ATGCGATTTGATGATTGTCT+TGG | - | chr5_2:63543233-63543252 | Msa0781120:intron | 35.0% |
| ! | AACTCCAGTTTCCTTTTGTT+TGG | - | chr5_2:63544048-63544067 | Msa0781120:intron | 35.0% |
| TCAACCAAACAAAAGGAAAC+TGG | + | chr5_2:63544055-63544074 | None:intergenic | 35.0% | |
| CACTTGCACTCTTAAAAGAA+GGG | - | chr5_2:63544156-63544175 | Msa0781120:intron | 35.0% | |
| ACTTGCACTCTTAAAAGAAG+GGG | - | chr5_2:63544157-63544176 | Msa0781120:intron | 35.0% | |
| AAGTATTTGATCCTCCTTTC+AGG | + | chr5_2:63544323-63544342 | None:intergenic | 35.0% | |
| CCAAATAATTGGGCTTAAGT+GGG | + | chr5_2:63544744-63544763 | None:intergenic | 35.0% | |
| ACCAAATAATTGGGCTTAAG+TGG | + | chr5_2:63544745-63544764 | None:intergenic | 35.0% | |
| !!! | TAGCCCCTGAACTTTATTTT+AGG | - | chr5_2:63545224-63545243 | Msa0781120:intron | 35.0% |
| ! | CTTTTATGCAAACATGGACA+AGG | + | chr5_2:63545376-63545395 | None:intergenic | 35.0% |
| !!! | TTCTTCTATTTTTAACGCGC+AGG | - | chr5_2:63545720-63545739 | Msa0781120:intron | 35.0% |
| GGGGAGAAAATAAAACATAG+AGG | + | chr5_2:63545917-63545936 | None:intergenic | 35.0% | |
| CCCATAAGTTGTCAAACAAA+TGG | - | chr5_2:63546160-63546179 | Msa0781120:intron | 35.0% | |
| GTTCAAATAAGACTCCTCTA+AGG | - | chr5_2:63546185-63546204 | Msa0781120:intron | 35.0% | |
| !! | GACTCCTCTAAGGTATATAT+CGG | - | chr5_2:63546195-63546214 | Msa0781120:intron | 35.0% |
| CTTCTTCTCTATGGATTTCA+TGG | + | chr5_2:63546317-63546336 | None:intergenic | 35.0% | |
| AATGGTCATCATCATGTTGA+AGG | - | chr5_2:63546395-63546414 | Msa0781120:intron | 35.0% | |
| !! | TTTAGGTGTGGAAAAGCATT+AGG | - | chr5_2:63546464-63546483 | Msa0781120:intron | 35.0% |
| TTTCCTTAGAGCTTGAAGAT+GGG | + | chr5_2:63546504-63546523 | None:intergenic | 35.0% | |
| AAGGAATTTCCCATCCAATA+AGG | - | chr5_2:63546601-63546620 | Msa0781120:intron | 35.0% | |
| !! | CATATAAGGCCTTATTGGAT+GGG | + | chr5_2:63546613-63546632 | None:intergenic | 35.0% |
| AGATCTCATGTGACCATATA+AGG | + | chr5_2:63546627-63546646 | None:intergenic | 35.0% | |
| !! | TCAAATTTTGGCCACCAATA+TGG | - | chr5_2:63546773-63546792 | Msa0781120:intron | 35.0% |
| ! | CCACCAATATGGTTTAAAAC+CGG | - | chr5_2:63546784-63546803 | Msa0781120:intron | 35.0% |
| !!! | TTGCCGGTTTTAAACCATAT+TGG | + | chr5_2:63546790-63546809 | None:intergenic | 35.0% |
| TGACAACTTCAATGCAGATT+CGG | - | chr5_2:63546885-63546904 | Msa0781120:intron | 35.0% | |
| GCAAGGATCTGCTTTAATGA+GGG | - | chr5_2:63539316-63539335 | Msa0781120:CDS | 40.0% | |
| AATGGATCTTAGTTACCTCG+GGG | + | chr5_2:63539496-63539515 | None:intergenic | 40.0% | |
| !! | TGGATTGGTCAACCTCTAAA+TGG | + | chr5_2:63539514-63539533 | None:intergenic | 40.0% |
| ! | GTGTGTTGTCTTTGGTGATT+TGG | + | chr5_2:63540011-63540030 | None:intergenic | 40.0% |
| TCCTCGTTCTCCTCAAAAAT+CGG | + | chr5_2:63540339-63540358 | None:intergenic | 40.0% | |
| !!! | TACACTCGAGTTTTTGAGTG+TGG | - | chr5_2:63540912-63540931 | Msa0781120:intron | 40.0% |
| ! | GTAGCTTGCATGAATACAGT+TGG | + | chr5_2:63541065-63541084 | None:intergenic | 40.0% |
| GGGAAACATCTTCTTTATGG+GGG | - | chr5_2:63541914-63541933 | Msa0781120:intron | 40.0% | |
| TATGGGGGATACTATGTTCA+AGG | - | chr5_2:63541929-63541948 | Msa0781120:intron | 40.0% | |
| ATGGGGGATACTATGTTCAA+GGG | - | chr5_2:63541930-63541949 | Msa0781120:intron | 40.0% | |
| AACGAGGTAGACAAATTGTG+AGG | + | chr5_2:63542097-63542116 | None:intergenic | 40.0% | |
| ! | TACCTCGTTAACGGTGTTTT+TGG | - | chr5_2:63542108-63542127 | Msa0781120:intron | 40.0% |
| ! | ACCTCGTTAACGGTGTTTTT+GGG | - | chr5_2:63542109-63542128 | Msa0781120:intron | 40.0% |
| !! | CCTTCTTTTAAGAGTGCAAG+TGG | + | chr5_2:63544158-63544177 | None:intergenic | 40.0% |
| CCACTTGCACTCTTAAAAGA+AGG | - | chr5_2:63544155-63544174 | Msa0781120:intron | 40.0% | |
| CCCACTTAAGCCCAATTATT+TGG | - | chr5_2:63544741-63544760 | Msa0781120:intron | 40.0% | |
| ACATAGAGGAGTTGAAAGGA+GGG | + | chr5_2:63545903-63545922 | None:intergenic | 40.0% | |
| AACATAGAGGAGTTGAAAGG+AGG | + | chr5_2:63545904-63545923 | None:intergenic | 40.0% | |
| ! | AAGGGGTGTAGTGTGTATAT+GGG | + | chr5_2:63545937-63545956 | None:intergenic | 40.0% |
| ! | AAAGGGGTGTAGTGTGTATA+TGG | + | chr5_2:63545938-63545957 | None:intergenic | 40.0% |
| AATCCCATCTTCAAGCTCTA+AGG | - | chr5_2:63546498-63546517 | Msa0781120:intron | 40.0% | |
| CTTTCCTTAGAGCTTGAAGA+TGG | + | chr5_2:63546505-63546524 | None:intergenic | 40.0% | |
| !! | TCTTCAAGCTCTAAGGAAAG+AGG | - | chr5_2:63546505-63546524 | Msa0781120:intron | 40.0% |
| !! | CTTCAAGCTCTAAGGAAAGA+GGG | - | chr5_2:63546506-63546525 | Msa0781120:intron | 40.0% |
| !! | CCATATAAGGCCTTATTGGA+TGG | + | chr5_2:63546614-63546633 | None:intergenic | 40.0% |
| ! | CCATCCAATAAGGCCTTATA+TGG | - | chr5_2:63546611-63546630 | Msa0781120:intron | 40.0% |
| ! | GTGACCATATAAGGCCTTAT+TGG | + | chr5_2:63546618-63546637 | None:intergenic | 40.0% |
| !!! | CCGGTTTTAAACCATATTGG+TGG | + | chr5_2:63546787-63546806 | None:intergenic | 40.0% |
| ! | TGGTTTAAAACCGGCAAAAG+AGG | - | chr5_2:63546793-63546812 | Msa0781120:intron | 40.0% |
| TGCAACGCTTACCAATGAAG+TGG | - | chr5_2:63539274-63539293 | Msa0781120:CDS | 45.0% | |
| GCAACGCTTACCAATGAAGT+GGG | - | chr5_2:63539275-63539294 | Msa0781120:CDS | 45.0% | |
| TACCAATGAAGTGGGTCGAA+AGG | - | chr5_2:63539283-63539302 | Msa0781120:CDS | 45.0% | |
| CGCAAGGATCTGCTTTAATG+AGG | - | chr5_2:63539315-63539334 | Msa0781120:CDS | 45.0% | |
| !!! | TGCCAGCATACCGATTTTTG+AGG | - | chr5_2:63540326-63540345 | Msa0781120:intron | 45.0% |
| CTCCTCAAAAATCGGTATGC+TGG | + | chr5_2:63540331-63540350 | None:intergenic | 45.0% | |
| !! | ACCGATTTTTGAGGAGAACG+AGG | - | chr5_2:63540335-63540354 | Msa0781120:intron | 45.0% |
| AGTCTCTCTCTCTGTGAGTA+TGG | - | chr5_2:63541092-63541111 | Msa0781120:intron | 45.0% | |
| ACCCAAAAACACCGTTAACG+AGG | + | chr5_2:63542113-63542132 | None:intergenic | 45.0% | |
| !! | TTGCGTCATGGGTTGATTGA+GGG | + | chr5_2:63542182-63542201 | None:intergenic | 45.0% |
| !! | TTTGCTGCATGGTTGGTAGT+TGG | + | chr5_2:63543726-63543745 | None:intergenic | 45.0% |
| ! | GTTTGCATTTGCTGCATGGT+TGG | + | chr5_2:63543733-63543752 | None:intergenic | 45.0% |
| !!! | TTTTGTTTTGAACTCCCGCG+CGG | + | chr5_2:63544555-63544574 | None:intergenic | 45.0% |
| ! | AGGGGTGTAGTGTGTATATG+GGG | + | chr5_2:63545936-63545955 | None:intergenic | 45.0% |
| ! | GGGTGGTGAGTTGAAAACAA+AGG | - | chr5_2:63546526-63546545 | Msa0781120:intron | 45.0% |
| ACATGAGATCTCACCCTGAA+AGG | - | chr5_2:63546636-63546655 | Msa0781120:intron | 45.0% | |
| CATGAGATCTCACCCTGAAA+GGG | - | chr5_2:63546637-63546656 | Msa0781120:intron | 45.0% | |
| ! | GAGGGGTATGTATCCTAACA+AGG | - | chr5_2:63546664-63546683 | Msa0781120:intron | 45.0% |
| TTCGGATGACGAGGATAAGA+AGG | - | chr5_2:63546903-63546922 | Msa0781120:intron | 45.0% | |
| !!! | ATATAATATATTTTTAAATG+TGG | + | chr5_2:63539859-63539878 | None:intergenic | 5.0% |
| !!! | TTTTTTATAATTTTTTTTGA+AGG | + | chr5_2:63544442-63544461 | None:intergenic | 5.0% |
| !!! | TTATTTATCATTTAAAATAA+TGG | - | chr5_2:63544589-63544608 | Msa0781120:intron | 5.0% |
| !! | ATATAAAAAAAAAAAAAAGA+AGG | + | chr5_2:63545522-63545541 | None:intergenic | 5.0% |
| TGCCTTTCGACCCACTTCAT+TGG | + | chr5_2:63539288-63539307 | None:intergenic | 50.0% | |
| !! | CGAAAGGCATCAATCTCGCA+AGG | - | chr5_2:63539299-63539318 | Msa0781120:CDS | 50.0% |
| CGATTCATGACCAGCGTGTA+TGG | + | chr5_2:63539549-63539568 | None:intergenic | 50.0% | |
| TCACAGAGAGAGAGACTCAG+GGG | + | chr5_2:63541089-63541108 | None:intergenic | 50.0% | |
| CTCACAGAGAGAGAGACTCA+GGG | + | chr5_2:63541090-63541109 | None:intergenic | 50.0% | |
| ACTCACAGAGAGAGAGACTC+AGG | + | chr5_2:63541091-63541110 | None:intergenic | 50.0% | |
| CTAGTGAGAAAGGAACGTCG+TGG | + | chr5_2:63542006-63542025 | None:intergenic | 50.0% | |
| !! | CTTGCGTCATGGGTTGATTG+AGG | + | chr5_2:63542183-63542202 | None:intergenic | 50.0% |
| CTCAATCAACCCATGACGCA+AGG | - | chr5_2:63542181-63542200 | Msa0781120:intron | 50.0% | |
| !! | CTGCATGGTTGGTAGTTGGT+CGG | + | chr5_2:63543722-63543741 | None:intergenic | 50.0% |
| CAAATTACACACACTCCGCG+CGG | - | chr5_2:63544537-63544556 | Msa0781120:intron | 50.0% | |
| AAATTACACACACTCCGCGC+GGG | - | chr5_2:63544538-63544557 | Msa0781120:intron | 50.0% | |
| !! | CAAGCTCTAAGGAAAGAGGG+TGG | - | chr5_2:63546509-63546528 | Msa0781120:intron | 50.0% |
| GATCTCACCCTGAAAGGGAA+TGG | - | chr5_2:63546642-63546661 | Msa0781120:intron | 50.0% | |
| TCACCCTGAAAGGGAATGGA+GGG | - | chr5_2:63546646-63546665 | Msa0781120:intron | 50.0% | |
| TACCCCTCCATTCCCTTTCA+GGG | + | chr5_2:63546652-63546671 | None:intergenic | 50.0% | |
| ATACCCCTCCATTCCCTTTC+AGG | + | chr5_2:63546653-63546672 | None:intergenic | 50.0% | |
| ! | GCTAGAACGTCCTCTTTTGC+CGG | + | chr5_2:63546806-63546825 | None:intergenic | 50.0% |
| CAATGCAGATTCGGATGACG+AGG | - | chr5_2:63546894-63546913 | Msa0781120:intron | 50.0% | |
| CCAACAAGACCACTTGTACC+AGG | + | chr5_2:63546940-63546959 | None:intergenic | 50.0% | |
| !! | CCTGGTACAAGTGGTCTTGT+TGG | - | chr5_2:63546937-63546956 | Msa0781120:intron | 50.0% |
| ACCTCGGGGAGGATAACCTT+TGG | + | chr5_2:63539482-63539501 | None:intergenic | 55.0% | |
| GGATCTTAGTTACCTCGGGG+AGG | + | chr5_2:63539493-63539512 | None:intergenic | 55.0% | |
| ! | GGGGGTTTGCATTTGCTGCA+TGG | + | chr5_2:63543737-63543756 | None:intergenic | 55.0% |
| CTCACCCTGAAAGGGAATGG+AGG | - | chr5_2:63546645-63546664 | Msa0781120:intron | 55.0% | |
| CACCCTGAAAGGGAATGGAG+GGG | - | chr5_2:63546647-63546666 | Msa0781120:intron | 55.0% | |
| GCCAAAGGTTATCCTCCCCG+AGG | - | chr5_2:63539478-63539497 | Msa0781120:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 63539239 | 63547095 | 63539239 | ID=Msa0781120;Name=Msa0781120 |
| chr5_2 | mRNA | 63539239 | 63547095 | 63539239 | ID=Msa0781120-mRNA-1;Parent=Msa0781120;Name=Msa0781120-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|3|0|220 |
| chr5_2 | exon | 63546983 | 63547095 | 63546983 | ID=Msa0781120-mRNA-1:exon:18882;Parent=Msa0781120-mRNA-1 |
| chr5_2 | exon | 63539540 | 63539865 | 63539540 | ID=Msa0781120-mRNA-1:exon:18881;Parent=Msa0781120-mRNA-1 |
| chr5_2 | exon | 63539239 | 63539462 | 63539239 | ID=Msa0781120-mRNA-1:exon:18880;Parent=Msa0781120-mRNA-1 |
| chr5_2 | CDS | 63546983 | 63547095 | 63546983 | ID=Msa0781120-mRNA-1:cds;Parent=Msa0781120-mRNA-1 |
| chr5_2 | CDS | 63539540 | 63539865 | 63539540 | ID=Msa0781120-mRNA-1:cds;Parent=Msa0781120-mRNA-1 |
| chr5_2 | CDS | 63539239 | 63539462 | 63539239 | ID=Msa0781120-mRNA-1:cds;Parent=Msa0781120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
