Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783550 | sp|Q8L5T5|LBD15_ARATH | 72.455 | 167 | 35 | 4 | 1 | 157 | 1 | 166 | 2.48e-69 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783550 | G7KH28 | 97.449 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 9.14e-141 | 399 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0783550 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783550 | MtrunA17_Chr5g0438091 | 97.449 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 1.76e-144 | 399 |
| Msa0783550 | MtrunA17_Chr3g0129071 | 61.765 | 238 | 46 | 8 | 1 | 195 | 1 | 236 | 4.89e-84 | 248 |
| Msa0783550 | MtrunA17_Chr5g0432451 | 58.190 | 232 | 57 | 7 | 1 | 195 | 1 | 229 | 3.62e-70 | 213 |
| Msa0783550 | MtrunA17_Chr2g0311601 | 63.964 | 111 | 40 | 0 | 36 | 146 | 10 | 120 | 5.70e-49 | 156 |
| Msa0783550 | MtrunA17_Chr5g0437571 | 60.504 | 119 | 47 | 0 | 34 | 152 | 1 | 119 | 7.06e-49 | 156 |
| Msa0783550 | MtrunA17_Chr3g0114061 | 67.619 | 105 | 34 | 0 | 35 | 139 | 4 | 108 | 6.53e-48 | 154 |
| Msa0783550 | MtrunA17_Chr4g0043421 | 62.727 | 110 | 41 | 0 | 29 | 138 | 5 | 114 | 1.56e-47 | 153 |
| Msa0783550 | MtrunA17_Chr4g0058651 | 62.385 | 109 | 41 | 0 | 38 | 146 | 10 | 118 | 1.19e-44 | 146 |
| Msa0783550 | MtrunA17_Chr7g0227511 | 60.714 | 112 | 44 | 0 | 31 | 142 | 3 | 114 | 1.99e-44 | 145 |
| Msa0783550 | MtrunA17_Chr3g0106101 | 55.645 | 124 | 50 | 1 | 37 | 155 | 5 | 128 | 9.99e-44 | 144 |
| Msa0783550 | MtrunA17_Chr3g0117121 | 59.091 | 110 | 45 | 0 | 37 | 146 | 8 | 117 | 8.61e-43 | 142 |
| Msa0783550 | MtrunA17_Chr6g0449641 | 60.577 | 104 | 41 | 0 | 36 | 139 | 6 | 109 | 1.11e-42 | 140 |
| Msa0783550 | MtrunA17_Chr5g0402611 | 60.748 | 107 | 42 | 0 | 36 | 142 | 5 | 111 | 2.45e-42 | 144 |
| Msa0783550 | MtrunA17_Chr3g0115431 | 59.813 | 107 | 43 | 0 | 36 | 142 | 6 | 112 | 2.77e-42 | 141 |
| Msa0783550 | MtrunA17_Chr4g0030001 | 55.263 | 114 | 50 | 1 | 38 | 150 | 23 | 136 | 5.48e-42 | 140 |
| Msa0783550 | MtrunA17_Chr6g0449651 | 57.009 | 107 | 46 | 0 | 36 | 142 | 64 | 170 | 7.20e-41 | 137 |
| Msa0783550 | MtrunA17_Chr3g0113891 | 59.804 | 102 | 41 | 0 | 36 | 137 | 11 | 112 | 1.52e-40 | 136 |
| Msa0783550 | MtrunA17_Chr7g0245871 | 52.174 | 138 | 59 | 2 | 39 | 169 | 27 | 164 | 4.89e-40 | 136 |
| Msa0783550 | MtrunA17_Chr3g0097221 | 55.963 | 109 | 48 | 0 | 36 | 144 | 4 | 112 | 5.39e-40 | 137 |
| Msa0783550 | MtrunA17_Chr1g0200201 | 54.955 | 111 | 50 | 0 | 40 | 150 | 73 | 183 | 8.87e-40 | 135 |
| Msa0783550 | MtrunA17_Chr8g0353981 | 44.231 | 156 | 87 | 0 | 36 | 191 | 4 | 159 | 1.34e-39 | 135 |
| Msa0783550 | MtrunA17_Chr5g0437401 | 55.660 | 106 | 47 | 0 | 36 | 141 | 8 | 113 | 7.58e-39 | 131 |
| Msa0783550 | MtrunA17_Chr7g0260971 | 51.304 | 115 | 54 | 2 | 27 | 139 | 1 | 115 | 1.91e-36 | 126 |
| Msa0783550 | MtrunA17_Chr7g0225111 | 53.333 | 105 | 49 | 0 | 40 | 144 | 6 | 110 | 5.58e-36 | 122 |
| Msa0783550 | MtrunA17_Chr8g0351701 | 47.794 | 136 | 65 | 3 | 39 | 168 | 23 | 158 | 4.72e-35 | 123 |
| Msa0783550 | MtrunA17_Chr8g0351721 | 50.435 | 115 | 56 | 1 | 39 | 152 | 18 | 132 | 4.32e-34 | 120 |
| Msa0783550 | MtrunA17_Chr5g0444351 | 46.457 | 127 | 65 | 1 | 40 | 166 | 6 | 129 | 4.49e-34 | 118 |
| Msa0783550 | MtrunA17_Chr1g0184281 | 53.465 | 101 | 46 | 1 | 39 | 138 | 15 | 115 | 5.43e-34 | 120 |
| Msa0783550 | MtrunA17_Chr6g0460951 | 49.107 | 112 | 56 | 1 | 38 | 148 | 39 | 150 | 1.88e-33 | 119 |
| Msa0783550 | MtrunA17_Chr7g0261031 | 53.398 | 103 | 45 | 2 | 38 | 138 | 7 | 108 | 2.66e-32 | 116 |
| Msa0783550 | MtrunA17_Chr1g0184271 | 53.922 | 102 | 44 | 2 | 39 | 138 | 12 | 112 | 4.11e-32 | 115 |
| Msa0783550 | MtrunA17_Chr5g0435641 | 50.505 | 99 | 48 | 1 | 38 | 135 | 6 | 104 | 2.64e-30 | 110 |
| Msa0783550 | MtrunA17_Chr8g0374601 | 47.115 | 104 | 55 | 0 | 39 | 142 | 26 | 129 | 1.78e-29 | 110 |
| Msa0783550 | MtrunA17_Chr7g0245861 | 54.444 | 90 | 38 | 2 | 39 | 125 | 12 | 101 | 3.52e-27 | 100 |
| Msa0783550 | MtrunA17_Chr8g0374591 | 41.739 | 115 | 64 | 1 | 39 | 150 | 8 | 122 | 3.85e-27 | 100 |
| Msa0783550 | MtrunA17_Chr6g0460941 | 45.161 | 93 | 50 | 1 | 35 | 126 | 3 | 95 | 1.65e-26 | 97.4 |
| Msa0783550 | MtrunA17_Chr8g0374581 | 46.667 | 105 | 55 | 1 | 39 | 142 | 8 | 112 | 2.33e-25 | 98.2 |
| Msa0783550 | MtrunA17_Chr6g0452691 | 39.806 | 103 | 61 | 1 | 32 | 133 | 2 | 104 | 2.97e-25 | 96.7 |
| Msa0783550 | MtrunA17_Chr4g0059901 | 41.346 | 104 | 61 | 0 | 36 | 139 | 7 | 110 | 1.64e-24 | 96.7 |
| Msa0783550 | MtrunA17_Chr6g0452671 | 38.235 | 102 | 63 | 0 | 35 | 136 | 7 | 108 | 1.08e-23 | 93.2 |
| Msa0783550 | MtrunA17_Chr6g0452661 | 32.484 | 157 | 91 | 3 | 40 | 181 | 10 | 166 | 6.90e-23 | 92.0 |
| Msa0783550 | MtrunA17_Chr4g0040831 | 35.185 | 108 | 68 | 1 | 40 | 147 | 16 | 121 | 3.05e-21 | 86.7 |
| Msa0783550 | MtrunA17_Chr2g0330201 | 39.048 | 105 | 62 | 2 | 36 | 139 | 16 | 119 | 8.24e-21 | 87.4 |
| Msa0783550 | MtrunA17_Chr8g0342351 | 35.780 | 109 | 68 | 2 | 36 | 143 | 9 | 116 | 3.00e-20 | 85.5 |
| Msa0783550 | MtrunA17_Chr5g0439111 | 34.579 | 107 | 66 | 2 | 34 | 136 | 1 | 107 | 1.45e-19 | 83.2 |
| Msa0783550 | MtrunA17_Chr4g0055441 | 35.714 | 98 | 62 | 1 | 40 | 136 | 3 | 100 | 2.34e-19 | 80.5 |
| Msa0783550 | MtrunA17_Chr2g0326041 | 62.000 | 50 | 19 | 0 | 38 | 87 | 32 | 81 | 6.77e-18 | 75.1 |
| Msa0783550 | MtrunA17_Chr2g0326051 | 50.746 | 67 | 33 | 0 | 84 | 150 | 5 | 71 | 1.13e-16 | 72.8 |
| Msa0783550 | MtrunA17_Chr4g0046201 | 32.955 | 88 | 59 | 0 | 38 | 125 | 5 | 92 | 5.56e-14 | 68.6 |
| Msa0783550 | MtrunA17_Chr8g0337271 | 28.873 | 142 | 94 | 2 | 40 | 180 | 11 | 146 | 2.72e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783550 | AT2G40470.1 | 72.455 | 167 | 35 | 4 | 1 | 157 | 1 | 166 | 2.52e-70 | 213 |
| Msa0783550 | AT2G40470.2 | 79.851 | 134 | 24 | 1 | 27 | 157 | 8 | 141 | 9.55e-67 | 203 |
| Msa0783550 | AT2G30340.1 | 60.714 | 168 | 53 | 2 | 1 | 155 | 1 | 168 | 3.05e-66 | 204 |
| Msa0783550 | AT2G30340.2 | 73.016 | 126 | 34 | 0 | 30 | 155 | 44 | 169 | 5.04e-65 | 201 |
| Msa0783550 | AT2G30130.1 | 60.000 | 120 | 48 | 0 | 37 | 156 | 6 | 125 | 6.29e-46 | 150 |
| Msa0783550 | AT1G31320.1 | 60.345 | 116 | 46 | 0 | 36 | 151 | 10 | 125 | 8.37e-46 | 149 |
| Msa0783550 | AT3G27650.1 | 60.748 | 107 | 42 | 0 | 36 | 142 | 36 | 142 | 2.84e-43 | 142 |
| Msa0783550 | AT5G63090.4 | 53.285 | 137 | 61 | 1 | 37 | 170 | 9 | 145 | 6.40e-43 | 142 |
| Msa0783550 | AT5G63090.3 | 53.285 | 137 | 61 | 1 | 37 | 170 | 9 | 145 | 6.40e-43 | 142 |
| Msa0783550 | AT5G63090.2 | 53.285 | 137 | 61 | 1 | 37 | 170 | 9 | 145 | 6.40e-43 | 142 |
| Msa0783550 | AT5G63090.1 | 53.285 | 137 | 61 | 1 | 37 | 170 | 9 | 145 | 6.40e-43 | 142 |
| Msa0783550 | AT5G66870.1 | 55.072 | 138 | 57 | 3 | 36 | 173 | 4 | 136 | 1.06e-42 | 145 |
| Msa0783550 | AT1G07900.1 | 54.867 | 113 | 51 | 0 | 38 | 150 | 32 | 144 | 6.57e-42 | 140 |
| Msa0783550 | AT1G16530.1 | 50.704 | 142 | 63 | 3 | 23 | 162 | 3 | 139 | 6.60e-42 | 139 |
| Msa0783550 | AT2G28500.1 | 54.867 | 113 | 51 | 0 | 38 | 150 | 54 | 166 | 2.13e-41 | 140 |
| Msa0783550 | AT2G23660.2 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 7.84e-41 | 140 |
| Msa0783550 | AT2G23660.3 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 7.84e-41 | 140 |
| Msa0783550 | AT2G23660.1 | 57.944 | 107 | 45 | 0 | 36 | 142 | 2 | 108 | 7.84e-41 | 140 |
| Msa0783550 | AT1G65620.1 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.82e-40 | 136 |
| Msa0783550 | AT1G65620.4 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.82e-40 | 136 |
| Msa0783550 | AT1G65620.3 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.82e-40 | 136 |
| Msa0783550 | AT1G65620.5 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.82e-40 | 136 |
| Msa0783550 | AT1G65620.2 | 61.468 | 109 | 42 | 0 | 35 | 143 | 5 | 113 | 1.82e-40 | 136 |
| Msa0783550 | AT3G11090.1 | 58.654 | 104 | 43 | 0 | 36 | 139 | 8 | 111 | 4.52e-38 | 129 |
| Msa0783550 | AT3G26620.1 | 55.000 | 100 | 45 | 0 | 40 | 139 | 6 | 105 | 5.44e-37 | 125 |
| Msa0783550 | AT3G26660.1 | 55.000 | 100 | 45 | 0 | 40 | 139 | 6 | 105 | 5.80e-37 | 125 |
| Msa0783550 | AT2G42430.1 | 40.244 | 164 | 87 | 2 | 29 | 181 | 5 | 168 | 6.51e-36 | 126 |
| Msa0783550 | AT3G03760.1 | 51.786 | 112 | 53 | 1 | 38 | 148 | 50 | 161 | 5.81e-35 | 124 |
| Msa0783550 | AT4G00210.1 | 45.185 | 135 | 70 | 2 | 39 | 172 | 11 | 142 | 2.60e-34 | 121 |
| Msa0783550 | AT2G31310.1 | 51.961 | 102 | 48 | 1 | 38 | 138 | 6 | 107 | 1.01e-32 | 116 |
| Msa0783550 | AT4G00220.1 | 55.769 | 104 | 45 | 1 | 42 | 144 | 20 | 123 | 1.50e-32 | 117 |
| Msa0783550 | AT3G58190.1 | 52.941 | 102 | 45 | 2 | 39 | 138 | 11 | 111 | 2.37e-32 | 116 |
| Msa0783550 | AT5G06080.1 | 49.107 | 112 | 56 | 1 | 38 | 148 | 6 | 117 | 5.26e-32 | 114 |
| Msa0783550 | AT2G45420.1 | 50.962 | 104 | 50 | 1 | 42 | 144 | 40 | 143 | 9.52e-31 | 113 |
| Msa0783550 | AT2G42440.1 | 50.485 | 103 | 48 | 2 | 38 | 138 | 6 | 107 | 1.99e-30 | 112 |
| Msa0783550 | AT2G45410.1 | 51.515 | 99 | 47 | 1 | 42 | 139 | 19 | 117 | 1.23e-29 | 108 |
| Msa0783550 | AT3G50510.1 | 42.202 | 109 | 63 | 0 | 37 | 145 | 10 | 118 | 1.59e-26 | 100 |
| Msa0783550 | AT3G50510.2 | 42.202 | 109 | 63 | 0 | 37 | 145 | 10 | 118 | 1.59e-26 | 100 |
| Msa0783550 | AT3G47870.1 | 38.889 | 108 | 66 | 0 | 36 | 143 | 33 | 140 | 1.49e-25 | 101 |
| Msa0783550 | AT1G72980.1 | 40.385 | 104 | 62 | 0 | 36 | 139 | 10 | 113 | 1.32e-22 | 90.9 |
| Msa0783550 | AT5G35900.1 | 31.469 | 143 | 84 | 2 | 36 | 178 | 2 | 130 | 2.38e-22 | 90.1 |
| Msa0783550 | AT3G13850.1 | 32.540 | 126 | 77 | 2 | 40 | 157 | 37 | 162 | 6.94e-20 | 85.1 |
| Msa0783550 | AT1G06280.1 | 46.753 | 77 | 41 | 0 | 40 | 116 | 25 | 101 | 1.22e-18 | 80.5 |
| Msa0783550 | AT4G22700.1 | 39.216 | 102 | 51 | 4 | 40 | 132 | 6 | 105 | 1.37e-15 | 72.0 |
| Msa0783550 | AT2G19820.1 | 33.333 | 90 | 59 | 1 | 38 | 126 | 11 | 100 | 5.35e-15 | 68.6 |
| Msa0783550 | AT5G15060.1 | 38.202 | 89 | 49 | 3 | 27 | 110 | 3 | 90 | 7.14e-12 | 60.8 |
| Msa0783550 | AT1G36000.1 | 30.108 | 93 | 63 | 2 | 34 | 125 | 4 | 95 | 2.46e-11 | 58.9 |
Find 48 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGAAGATAGAAAATT+TGG | 0.194760 | 5_2:-67655732 | None:intergenic |
| TTTGGTTAGGTGTGCTTAAA+AGG | 0.203045 | 5_2:-67655714 | None:intergenic |
| GGAGAGAAATATGGAGAAAA+AGG | 0.233084 | 5_2:-67656140 | None:intergenic |
| CTTGCAAATTTAATCAAAAT+AGG | 0.235336 | 5_2:-67657190 | None:intergenic |
| TAGGAGAACTTAATGCTATA+AGG | 0.235865 | 5_2:+67656998 | Msa0783550:CDS |
| TTCTATCTTCAATTCCCTTC+TGG | 0.236463 | 5_2:+67655739 | Msa0783550:five_prime_UTR |
| CAACAAGTTCAATCATTATT+AGG | 0.250069 | 5_2:+67656979 | Msa0783550:CDS |
| GCTTCTGTCCACAAAGTCTT+TGG | 0.267396 | 5_2:+67656182 | Msa0783550:CDS |
| CATGTATAGGAGTTAATTTA+TGG | 0.272314 | 5_2:-67655791 | None:intergenic |
| AGACTAAGAGATCCAGTTTA+TGG | 0.273397 | 5_2:+67656928 | Msa0783550:CDS |
| TTACCTTTCTCTGGGCATTC+AGG | 0.276721 | 5_2:-67655832 | None:intergenic |
| TTTCAAAAGGGAAGAATGTT+AGG | 0.277293 | 5_2:+67656041 | Msa0783550:CDS |
| ATTTGTCTGTTGTGTGTAAA+TGG | 0.291668 | 5_2:-67657130 | None:intergenic |
| GCATCTGCTCTTTGATTCTC+TGG | 0.341032 | 5_2:-67656874 | None:intergenic |
| CTTTCCAATCATATATCTTC+AGG | 0.349103 | 5_2:-67657332 | None:intergenic |
| GGAAGAATGTTAGGTCCTTC+AGG | 0.355019 | 5_2:+67656050 | Msa0783550:CDS |
| GGCTCATGAGGAGAGAAATA+TGG | 0.368976 | 5_2:-67656149 | None:intergenic |
| GCACCCATGCATCCATAAAC+TGG | 0.381798 | 5_2:-67656940 | None:intergenic |
| AGGAGAACTTAATGCTATAA+GGG | 0.426620 | 5_2:+67656999 | Msa0783550:CDS |
| TGAAGATAGAAAATTTGGTT+AGG | 0.429462 | 5_2:-67655727 | None:intergenic |
| TGCTGGCACCAAAGACTTTG+TGG | 0.448216 | 5_2:-67656190 | None:intergenic |
| TAGCAACTTTGAGACGTTGC+TGG | 0.449895 | 5_2:-67656207 | None:intergenic |
| CAACGTCTCAAAGTTGCTAT+TGG | 0.452802 | 5_2:+67656211 | Msa0783550:CDS |
| ATGCTATCTGAAACATGTAT+AGG | 0.489633 | 5_2:-67655804 | None:intergenic |
| ACTTGAAATTGAGCTATAAC+CGG | 0.496798 | 5_2:-67657157 | None:intergenic |
| GAGATAGGAAAGAAGAGAGA+GGG | 0.526552 | 5_2:+67656008 | Msa0783550:CDS |
| AGATCCAGTTTATGGATGCA+TGG | 0.526865 | 5_2:+67656936 | Msa0783550:CDS |
| TTTGAGACGAAGGTGTGCCC+AGG | 0.536248 | 5_2:+67656112 | Msa0783550:CDS |
| ATTGATACATCCTCTGAAGA+AGG | 0.537222 | 5_2:-67657063 | None:intergenic |
| GCAAACTTCTGAGGCTCATG+AGG | 0.547685 | 5_2:-67656161 | None:intergenic |
| AATACATAAATACAAACTCA+TGG | 0.548288 | 5_2:+67657026 | Msa0783550:CDS |
| TGAGATAGGAAAGAAGAGAG+AGG | 0.549797 | 5_2:+67656007 | Msa0783550:CDS |
| GAAGTGATAGAGAGTCCAGA+AGG | 0.555296 | 5_2:-67655754 | None:intergenic |
| ATGCCTGAATGCCCAGAGAA+AGG | 0.567591 | 5_2:+67655829 | Msa0783550:exon |
| TAAATGGAAGAAGGAAGCAT+TGG | 0.572303 | 5_2:-67657114 | None:intergenic |
| AAAAGACTATATATTAGTCA+TGG | 0.576869 | 5_2:+67657258 | Msa0783550:three_prime_UTR |
| GATCCAGTTTATGGATGCAT+GGG | 0.578062 | 5_2:+67656937 | Msa0783550:CDS |
| TAACATGCTTCCTTCTTCAG+AGG | 0.586801 | 5_2:+67657053 | Msa0783550:CDS |
| TGGACAGAAGCAAACTTCTG+AGG | 0.589514 | 5_2:-67656170 | None:intergenic |
| AAAAGCTTGCATGCAGCACA+AGG | 0.594669 | 5_2:-67656092 | None:intergenic |
| GCATGCAGCACAAGGAGTAG+TGG | 0.596320 | 5_2:-67656084 | None:intergenic |
| TGTTGTGTGTAAATGGAAGA+AGG | 0.615604 | 5_2:-67657123 | None:intergenic |
| GTGGTATTTAGTGTTCCTGA+AGG | 0.618012 | 5_2:-67656065 | None:intergenic |
| AAGTGATAGAGAGTCCAGAA+GGG | 0.627822 | 5_2:-67655753 | None:intergenic |
| GAAATTGAGCTATAACCGGT+AGG | 0.628685 | 5_2:-67657153 | None:intergenic |
| ACACAACAGACAAATCCTAC+CGG | 0.648342 | 5_2:+67657138 | Msa0783550:CDS |
| AGCATTGGTAGTGATGTTGA+AGG | 0.658275 | 5_2:-67657099 | None:intergenic |
| ATTGGTAGTGATGTTGAAGG+TGG | 0.681106 | 5_2:-67657096 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGATAACAAAAAATTT+AGG | + | chr5_2:67656361-67656380 | Msa0783550:intron | 10.0% |
| !!! | AATTGATAACAAAAAATTTA+GGG | + | chr5_2:67656362-67656381 | Msa0783550:intron | 10.0% |
| !! | TTAAAAAATATTCTAATTAG+TGG | + | chr5_2:67656558-67656577 | Msa0783550:intron | 10.0% |
| !! | AAAAAAAAAATAAAATTGAG+AGG | - | chr5_2:67656645-67656664 | None:intergenic | 10.0% |
| !!! | AAATTGATAACAAAAAATTT+AGG | + | chr5_2:67656361-67656380 | Msa0783550:intron | 10.0% |
| !!! | AATTGATAACAAAAAATTTA+GGG | + | chr5_2:67656362-67656381 | Msa0783550:intron | 10.0% |
| !! | TTAAAAAATATTCTAATTAG+TGG | + | chr5_2:67656558-67656577 | Msa0783550:intron | 10.0% |
| !! | AAAAAAAAAATAAAATTGAG+AGG | - | chr5_2:67656645-67656664 | None:intergenic | 10.0% |
| !! | ATATGCTTTAATATCTATAT+AGG | + | chr5_2:67655970-67655989 | Msa0783550:intron | 15.0% |
| !! | TATGCTTTAATATCTATATA+GGG | + | chr5_2:67655971-67655990 | Msa0783550:intron | 15.0% |
| !! | ATATTTGTAATAATGAACTA+AGG | - | chr5_2:67656252-67656271 | None:intergenic | 15.0% |
| !! | ATATACATTAGCATATATAA+GGG | + | chr5_2:67656328-67656347 | Msa0783550:intron | 15.0% |
| !!! | TTAGACAACATTTTTTTAAT+CGG | - | chr5_2:67656448-67656467 | None:intergenic | 15.0% |
| !!! | TACAAATAATGTTATTTAGA+GGG | - | chr5_2:67656743-67656762 | None:intergenic | 15.0% |
| !!! | ATACAAATAATGTTATTTAG+AGG | - | chr5_2:67656744-67656763 | None:intergenic | 15.0% |
| !! | AAAAAGTAACATTTGTAATA+TGG | + | chr5_2:67656831-67656850 | Msa0783550:intron | 15.0% |
| !! | ATATGCTTTAATATCTATAT+AGG | + | chr5_2:67655970-67655989 | Msa0783550:intron | 15.0% |
| !! | TATGCTTTAATATCTATATA+GGG | + | chr5_2:67655971-67655990 | Msa0783550:intron | 15.0% |
| !! | ATATTTGTAATAATGAACTA+AGG | - | chr5_2:67656252-67656271 | None:intergenic | 15.0% |
| !! | ATATACATTAGCATATATAA+GGG | + | chr5_2:67656328-67656347 | Msa0783550:intron | 15.0% |
| !!! | TTAGACAACATTTTTTTAAT+CGG | - | chr5_2:67656448-67656467 | None:intergenic | 15.0% |
| !!! | TACAAATAATGTTATTTAGA+GGG | - | chr5_2:67656743-67656762 | None:intergenic | 15.0% |
| !!! | ATACAAATAATGTTATTTAG+AGG | - | chr5_2:67656744-67656763 | None:intergenic | 15.0% |
| !! | AAAAAGTAACATTTGTAATA+TGG | + | chr5_2:67656831-67656850 | Msa0783550:intron | 15.0% |
| !! | ATGCTTTAATATCTATATAG+GGG | + | chr5_2:67655972-67655991 | Msa0783550:intron | 20.0% |
| !!! | TTGATTTTATTTTAAGTCGA+TGG | + | chr5_2:67656305-67656324 | Msa0783550:intron | 20.0% |
| !! | GATATACATTAGCATATATA+AGG | + | chr5_2:67656327-67656346 | Msa0783550:intron | 20.0% |
| !! | TTGTAAAAGTCCTAAATTAT+TGG | - | chr5_2:67656412-67656431 | None:intergenic | 20.0% |
| !!! | AAATGGATTACTAAATAATG+TGG | + | chr5_2:67656517-67656536 | Msa0783550:intron | 20.0% |
| !!! | AATGGATTACTAAATAATGT+GGG | + | chr5_2:67656518-67656537 | Msa0783550:intron | 20.0% |
| !!! | ACAAATAATGTTATTTAGAG+GGG | - | chr5_2:67656742-67656761 | None:intergenic | 20.0% |
| !! | TAATATGGTTGTGTTTAATT+AGG | + | chr5_2:67656846-67656865 | Msa0783550:intron | 20.0% |
| !! | AATACATAAATACAAACTCA+TGG | + | chr5_2:67657026-67657045 | Msa0783550:CDS | 20.0% |
| !! | CTTGCAAATTTAATCAAAAT+AGG | - | chr5_2:67657193-67657212 | None:intergenic | 20.0% |
| !! | AAAAGACTATATATTAGTCA+TGG | + | chr5_2:67657258-67657277 | Msa0783550:three_prime_UTR | 20.0% |
| !! | ATGCTTTAATATCTATATAG+GGG | + | chr5_2:67655972-67655991 | Msa0783550:intron | 20.0% |
| !!! | TTGATTTTATTTTAAGTCGA+TGG | + | chr5_2:67656305-67656324 | Msa0783550:intron | 20.0% |
| !! | GATATACATTAGCATATATA+AGG | + | chr5_2:67656327-67656346 | Msa0783550:intron | 20.0% |
| !! | TTGTAAAAGTCCTAAATTAT+TGG | - | chr5_2:67656412-67656431 | None:intergenic | 20.0% |
| !!! | AAATGGATTACTAAATAATG+TGG | + | chr5_2:67656517-67656536 | Msa0783550:intron | 20.0% |
| !!! | AATGGATTACTAAATAATGT+GGG | + | chr5_2:67656518-67656537 | Msa0783550:intron | 20.0% |
| !!! | ACAAATAATGTTATTTAGAG+GGG | - | chr5_2:67656742-67656761 | None:intergenic | 20.0% |
| !! | TAATATGGTTGTGTTTAATT+AGG | + | chr5_2:67656846-67656865 | Msa0783550:intron | 20.0% |
| !! | AATACATAAATACAAACTCA+TGG | + | chr5_2:67657026-67657045 | Msa0783550:CDS | 20.0% |
| !! | CTTGCAAATTTAATCAAAAT+AGG | - | chr5_2:67657193-67657212 | None:intergenic | 20.0% |
| !! | AAAAGACTATATATTAGTCA+TGG | + | chr5_2:67657258-67657277 | Msa0783550:three_prime_UTR | 20.0% |
| ! | TGAAGATAGAAAATTTGGTT+AGG | - | chr5_2:67655730-67655749 | None:intergenic | 25.0% |
| ! | GGAATTGAAGATAGAAAATT+TGG | - | chr5_2:67655735-67655754 | None:intergenic | 25.0% |
| ! | CATGTATAGGAGTTAATTTA+TGG | - | chr5_2:67655794-67655813 | None:intergenic | 25.0% |
| ! | TGCTTTAATATCTATATAGG+GGG | + | chr5_2:67655973-67655992 | Msa0783550:intron | 25.0% |
| ! | CAACAAGTTCAATCATTATT+AGG | + | chr5_2:67656979-67656998 | Msa0783550:CDS | 25.0% |
| !! | TTTTCCTGAAGATATATGAT+TGG | + | chr5_2:67657328-67657347 | Msa0783550:three_prime_UTR | 25.0% |
| ! | TGAAGATAGAAAATTTGGTT+AGG | - | chr5_2:67655730-67655749 | None:intergenic | 25.0% |
| ! | GGAATTGAAGATAGAAAATT+TGG | - | chr5_2:67655735-67655754 | None:intergenic | 25.0% |
| ! | CATGTATAGGAGTTAATTTA+TGG | - | chr5_2:67655794-67655813 | None:intergenic | 25.0% |
| ! | TGCTTTAATATCTATATAGG+GGG | + | chr5_2:67655973-67655992 | Msa0783550:intron | 25.0% |
| ! | CAACAAGTTCAATCATTATT+AGG | + | chr5_2:67656979-67656998 | Msa0783550:CDS | 25.0% |
| !! | TTTTCCTGAAGATATATGAT+TGG | + | chr5_2:67657328-67657347 | Msa0783550:three_prime_UTR | 25.0% |
| ! | ATGCTATCTGAAACATGTAT+AGG | - | chr5_2:67655807-67655826 | None:intergenic | 30.0% |
| ! | GGTGATGATTCTTTTCAAAA+GGG | + | chr5_2:67656029-67656048 | Msa0783550:CDS | 30.0% |
| TTTCAAAAGGGAAGAATGTT+AGG | + | chr5_2:67656041-67656060 | Msa0783550:CDS | 30.0% | |
| GATTTGTCGACCAATAATTT+AGG | + | chr5_2:67656399-67656418 | Msa0783550:intron | 30.0% | |
| CTCATGAACTGATCAATATA+TGG | - | chr5_2:67656682-67656701 | None:intergenic | 30.0% | |
| CATATATTGATCAGTTCATG+AGG | + | chr5_2:67656680-67656699 | Msa0783550:intron | 30.0% | |
| ATATCGTCATGATCTAATTG+TGG | - | chr5_2:67656707-67656726 | None:intergenic | 30.0% | |
| ATTCAAGTAGAATGCACATA+AGG | - | chr5_2:67656776-67656795 | None:intergenic | 30.0% | |
| TATGGTTGTGTTTAATTAGG+AGG | + | chr5_2:67656849-67656868 | Msa0783550:intron | 30.0% | |
| TAGGAGAACTTAATGCTATA+AGG | + | chr5_2:67656998-67657017 | Msa0783550:CDS | 30.0% | |
| AGGAGAACTTAATGCTATAA+GGG | + | chr5_2:67656999-67657018 | Msa0783550:CDS | 30.0% | |
| ATTTGTCTGTTGTGTGTAAA+TGG | - | chr5_2:67657133-67657152 | None:intergenic | 30.0% | |
| ACTTGAAATTGAGCTATAAC+CGG | - | chr5_2:67657160-67657179 | None:intergenic | 30.0% | |
| CTTTCCAATCATATATCTTC+AGG | - | chr5_2:67657335-67657354 | None:intergenic | 30.0% | |
| ! | ATGCTATCTGAAACATGTAT+AGG | - | chr5_2:67655807-67655826 | None:intergenic | 30.0% |
| ! | GGTGATGATTCTTTTCAAAA+GGG | + | chr5_2:67656029-67656048 | Msa0783550:CDS | 30.0% |
| TTTCAAAAGGGAAGAATGTT+AGG | + | chr5_2:67656041-67656060 | Msa0783550:CDS | 30.0% | |
| GATTTGTCGACCAATAATTT+AGG | + | chr5_2:67656399-67656418 | Msa0783550:intron | 30.0% | |
| CTCATGAACTGATCAATATA+TGG | - | chr5_2:67656682-67656701 | None:intergenic | 30.0% | |
| CATATATTGATCAGTTCATG+AGG | + | chr5_2:67656680-67656699 | Msa0783550:intron | 30.0% | |
| ATATCGTCATGATCTAATTG+TGG | - | chr5_2:67656707-67656726 | None:intergenic | 30.0% | |
| ATTCAAGTAGAATGCACATA+AGG | - | chr5_2:67656776-67656795 | None:intergenic | 30.0% | |
| TATGGTTGTGTTTAATTAGG+AGG | + | chr5_2:67656849-67656868 | Msa0783550:intron | 30.0% | |
| TAGGAGAACTTAATGCTATA+AGG | + | chr5_2:67656998-67657017 | Msa0783550:CDS | 30.0% | |
| AGGAGAACTTAATGCTATAA+GGG | + | chr5_2:67656999-67657018 | Msa0783550:CDS | 30.0% | |
| ATTTGTCTGTTGTGTGTAAA+TGG | - | chr5_2:67657133-67657152 | None:intergenic | 30.0% | |
| ACTTGAAATTGAGCTATAAC+CGG | - | chr5_2:67657160-67657179 | None:intergenic | 30.0% | |
| CTTTCCAATCATATATCTTC+AGG | - | chr5_2:67657335-67657354 | None:intergenic | 30.0% | |
| TTTGGTTAGGTGTGCTTAAA+AGG | - | chr5_2:67655717-67655736 | None:intergenic | 35.0% | |
| TTCTATCTTCAATTCCCTTC+TGG | + | chr5_2:67655739-67655758 | Msa0783550:five_prime_UTR | 35.0% | |
| ! | GAGTTTTCTTACCTTTCTCT+GGG | - | chr5_2:67655843-67655862 | None:intergenic | 35.0% |
| ! | AGAGTTTTCTTACCTTTCTC+TGG | - | chr5_2:67655844-67655863 | None:intergenic | 35.0% |
| !!! | GGGAGATTTTTTGATGAGAT+AGG | + | chr5_2:67655993-67656012 | Msa0783550:CDS | 35.0% |
| ! | GGGTGATGATTCTTTTCAAA+AGG | + | chr5_2:67656028-67656047 | Msa0783550:CDS | 35.0% |
| GGAGAGAAATATGGAGAAAA+AGG | - | chr5_2:67656143-67656162 | None:intergenic | 35.0% | |
| ACTAAAATTCCCGCATACAT+AGG | + | chr5_2:67656471-67656490 | Msa0783550:intron | 35.0% | |
| CTAAAATTCCCGCATACATA+GGG | + | chr5_2:67656472-67656491 | Msa0783550:intron | 35.0% | |
| ! | TTCTAATTAGTGGACCTTTG+AGG | + | chr5_2:67656568-67656587 | Msa0783550:intron | 35.0% |
| ACTTACCAAGTTAACCTCAA+AGG | - | chr5_2:67656585-67656604 | None:intergenic | 35.0% | |
| AGACTAAGAGATCCAGTTTA+TGG | + | chr5_2:67656928-67656947 | Msa0783550:CDS | 35.0% | |
| ! | ATTGATACATCCTCTGAAGA+AGG | - | chr5_2:67657066-67657085 | None:intergenic | 35.0% |
| ! | TAAATGGAAGAAGGAAGCAT+TGG | - | chr5_2:67657117-67657136 | None:intergenic | 35.0% |
| TGTTGTGTGTAAATGGAAGA+AGG | - | chr5_2:67657126-67657145 | None:intergenic | 35.0% | |
| TTTGGTTAGGTGTGCTTAAA+AGG | - | chr5_2:67655717-67655736 | None:intergenic | 35.0% | |
| TTCTATCTTCAATTCCCTTC+TGG | + | chr5_2:67655739-67655758 | Msa0783550:five_prime_UTR | 35.0% | |
| ! | GAGTTTTCTTACCTTTCTCT+GGG | - | chr5_2:67655843-67655862 | None:intergenic | 35.0% |
| ! | AGAGTTTTCTTACCTTTCTC+TGG | - | chr5_2:67655844-67655863 | None:intergenic | 35.0% |
| !!! | GGGAGATTTTTTGATGAGAT+AGG | + | chr5_2:67655993-67656012 | Msa0783550:CDS | 35.0% |
| ! | GGGTGATGATTCTTTTCAAA+AGG | + | chr5_2:67656028-67656047 | Msa0783550:CDS | 35.0% |
| GGAGAGAAATATGGAGAAAA+AGG | - | chr5_2:67656143-67656162 | None:intergenic | 35.0% | |
| ACTAAAATTCCCGCATACAT+AGG | + | chr5_2:67656471-67656490 | Msa0783550:intron | 35.0% | |
| CTAAAATTCCCGCATACATA+GGG | + | chr5_2:67656472-67656491 | Msa0783550:intron | 35.0% | |
| ! | TTCTAATTAGTGGACCTTTG+AGG | + | chr5_2:67656568-67656587 | Msa0783550:intron | 35.0% |
| ACTTACCAAGTTAACCTCAA+AGG | - | chr5_2:67656585-67656604 | None:intergenic | 35.0% | |
| AGACTAAGAGATCCAGTTTA+TGG | + | chr5_2:67656928-67656947 | Msa0783550:CDS | 35.0% | |
| ! | ATTGATACATCCTCTGAAGA+AGG | - | chr5_2:67657066-67657085 | None:intergenic | 35.0% |
| ! | TAAATGGAAGAAGGAAGCAT+TGG | - | chr5_2:67657117-67657136 | None:intergenic | 35.0% |
| TGTTGTGTGTAAATGGAAGA+AGG | - | chr5_2:67657126-67657145 | None:intergenic | 35.0% | |
| AAGTGATAGAGAGTCCAGAA+GGG | - | chr5_2:67655756-67655775 | None:intergenic | 40.0% | |
| TGAGATAGGAAAGAAGAGAG+AGG | + | chr5_2:67656007-67656026 | Msa0783550:CDS | 40.0% | |
| GAGATAGGAAAGAAGAGAGA+GGG | + | chr5_2:67656008-67656027 | Msa0783550:CDS | 40.0% | |
| GTGGTATTTAGTGTTCCTGA+AGG | - | chr5_2:67656068-67656087 | None:intergenic | 40.0% | |
| TGGAGAAAAAGGACATTCCT+GGG | - | chr5_2:67656132-67656151 | None:intergenic | 40.0% | |
| ATGGAGAAAAAGGACATTCC+TGG | - | chr5_2:67656133-67656152 | None:intergenic | 40.0% | |
| CAACGTCTCAAAGTTGCTAT+TGG | + | chr5_2:67656211-67656230 | Msa0783550:CDS | 40.0% | |
| GGAGACTCATAGTTGCTAAA+TGG | + | chr5_2:67656500-67656519 | Msa0783550:intron | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | + | chr5_2:67656936-67656955 | Msa0783550:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | + | chr5_2:67656937-67656956 | Msa0783550:CDS | 40.0% | |
| TAACATGCTTCCTTCTTCAG+AGG | + | chr5_2:67657053-67657072 | Msa0783550:CDS | 40.0% | |
| !! | ATTGGTAGTGATGTTGAAGG+TGG | - | chr5_2:67657099-67657118 | None:intergenic | 40.0% |
| !! | AGCATTGGTAGTGATGTTGA+AGG | - | chr5_2:67657102-67657121 | None:intergenic | 40.0% |
| ACACAACAGACAAATCCTAC+CGG | + | chr5_2:67657138-67657157 | Msa0783550:CDS | 40.0% | |
| GAAATTGAGCTATAACCGGT+AGG | - | chr5_2:67657156-67657175 | None:intergenic | 40.0% | |
| AAGTGATAGAGAGTCCAGAA+GGG | - | chr5_2:67655756-67655775 | None:intergenic | 40.0% | |
| TGAGATAGGAAAGAAGAGAG+AGG | + | chr5_2:67656007-67656026 | Msa0783550:CDS | 40.0% | |
| GAGATAGGAAAGAAGAGAGA+GGG | + | chr5_2:67656008-67656027 | Msa0783550:CDS | 40.0% | |
| GTGGTATTTAGTGTTCCTGA+AGG | - | chr5_2:67656068-67656087 | None:intergenic | 40.0% | |
| TGGAGAAAAAGGACATTCCT+GGG | - | chr5_2:67656132-67656151 | None:intergenic | 40.0% | |
| ATGGAGAAAAAGGACATTCC+TGG | - | chr5_2:67656133-67656152 | None:intergenic | 40.0% | |
| CAACGTCTCAAAGTTGCTAT+TGG | + | chr5_2:67656211-67656230 | Msa0783550:CDS | 40.0% | |
| GGAGACTCATAGTTGCTAAA+TGG | + | chr5_2:67656500-67656519 | Msa0783550:intron | 40.0% | |
| AGATCCAGTTTATGGATGCA+TGG | + | chr5_2:67656936-67656955 | Msa0783550:CDS | 40.0% | |
| GATCCAGTTTATGGATGCAT+GGG | + | chr5_2:67656937-67656956 | Msa0783550:CDS | 40.0% | |
| TAACATGCTTCCTTCTTCAG+AGG | + | chr5_2:67657053-67657072 | Msa0783550:CDS | 40.0% | |
| !! | ATTGGTAGTGATGTTGAAGG+TGG | - | chr5_2:67657099-67657118 | None:intergenic | 40.0% |
| !! | AGCATTGGTAGTGATGTTGA+AGG | - | chr5_2:67657102-67657121 | None:intergenic | 40.0% |
| ACACAACAGACAAATCCTAC+CGG | + | chr5_2:67657138-67657157 | Msa0783550:CDS | 40.0% | |
| GAAATTGAGCTATAACCGGT+AGG | - | chr5_2:67657156-67657175 | None:intergenic | 40.0% | |
| GAAGTGATAGAGAGTCCAGA+AGG | - | chr5_2:67655757-67655776 | None:intergenic | 45.0% | |
| TTACCTTTCTCTGGGCATTC+AGG | - | chr5_2:67655835-67655854 | None:intergenic | 45.0% | |
| GGAAGAATGTTAGGTCCTTC+AGG | + | chr5_2:67656050-67656069 | Msa0783550:CDS | 45.0% | |
| AAAAGCTTGCATGCAGCACA+AGG | - | chr5_2:67656095-67656114 | None:intergenic | 45.0% | |
| !!! | CATGCAAGCTTTTGAGACGA+AGG | + | chr5_2:67656102-67656121 | Msa0783550:CDS | 45.0% |
| GGCTCATGAGGAGAGAAATA+TGG | - | chr5_2:67656152-67656171 | None:intergenic | 45.0% | |
| TGGACAGAAGCAAACTTCTG+AGG | - | chr5_2:67656173-67656192 | None:intergenic | 45.0% | |
| GCTTCTGTCCACAAAGTCTT+TGG | + | chr5_2:67656182-67656201 | Msa0783550:CDS | 45.0% | |
| !! | TAGCAACTTTGAGACGTTGC+TGG | - | chr5_2:67656210-67656229 | None:intergenic | 45.0% |
| TCCTTAGACCCTATGTATGC+GGG | - | chr5_2:67656483-67656502 | None:intergenic | 45.0% | |
| CTCCTTAGACCCTATGTATG+CGG | - | chr5_2:67656484-67656503 | None:intergenic | 45.0% | |
| !! | GTGGACCTTTGAGGTTAACT+TGG | + | chr5_2:67656577-67656596 | Msa0783550:intron | 45.0% |
| GCATCTGCTCTTTGATTCTC+TGG | - | chr5_2:67656877-67656896 | None:intergenic | 45.0% | |
| GAAGTGATAGAGAGTCCAGA+AGG | - | chr5_2:67655757-67655776 | None:intergenic | 45.0% | |
| TTACCTTTCTCTGGGCATTC+AGG | - | chr5_2:67655835-67655854 | None:intergenic | 45.0% | |
| GGAAGAATGTTAGGTCCTTC+AGG | + | chr5_2:67656050-67656069 | Msa0783550:CDS | 45.0% | |
| AAAAGCTTGCATGCAGCACA+AGG | - | chr5_2:67656095-67656114 | None:intergenic | 45.0% | |
| !!! | CATGCAAGCTTTTGAGACGA+AGG | + | chr5_2:67656102-67656121 | Msa0783550:CDS | 45.0% |
| GGCTCATGAGGAGAGAAATA+TGG | - | chr5_2:67656152-67656171 | None:intergenic | 45.0% | |
| TGGACAGAAGCAAACTTCTG+AGG | - | chr5_2:67656173-67656192 | None:intergenic | 45.0% | |
| GCTTCTGTCCACAAAGTCTT+TGG | + | chr5_2:67656182-67656201 | Msa0783550:CDS | 45.0% | |
| !! | TAGCAACTTTGAGACGTTGC+TGG | - | chr5_2:67656210-67656229 | None:intergenic | 45.0% |
| TCCTTAGACCCTATGTATGC+GGG | - | chr5_2:67656483-67656502 | None:intergenic | 45.0% | |
| CTCCTTAGACCCTATGTATG+CGG | - | chr5_2:67656484-67656503 | None:intergenic | 45.0% | |
| !! | GTGGACCTTTGAGGTTAACT+TGG | + | chr5_2:67656577-67656596 | Msa0783550:intron | 45.0% |
| GCATCTGCTCTTTGATTCTC+TGG | - | chr5_2:67656877-67656896 | None:intergenic | 45.0% | |
| !!! | TATTTTTACTAATTAATATA+TGG | + | chr5_2:67655871-67655890 | Msa0783550:intron | 5.0% |
| !!! | TAATTAGAATATTTTTTAAA+AGG | - | chr5_2:67656557-67656576 | None:intergenic | 5.0% |
| !!! | TATTTTTACTAATTAATATA+TGG | + | chr5_2:67655871-67655890 | Msa0783550:intron | 5.0% |
| !!! | TAATTAGAATATTTTTTAAA+AGG | - | chr5_2:67656557-67656576 | None:intergenic | 5.0% |
| ATGCCTGAATGCCCAGAGAA+AGG | + | chr5_2:67655829-67655848 | Msa0783550:exon | 50.0% | |
| !! | GCAAACTTCTGAGGCTCATG+AGG | - | chr5_2:67656164-67656183 | None:intergenic | 50.0% |
| TGCTGGCACCAAAGACTTTG+TGG | - | chr5_2:67656193-67656212 | None:intergenic | 50.0% | |
| TCCCGCATACATAGGGTCTA+AGG | + | chr5_2:67656479-67656498 | Msa0783550:intron | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | - | chr5_2:67656943-67656962 | None:intergenic | 50.0% | |
| ATGCCTGAATGCCCAGAGAA+AGG | + | chr5_2:67655829-67655848 | Msa0783550:exon | 50.0% | |
| !! | GCAAACTTCTGAGGCTCATG+AGG | - | chr5_2:67656164-67656183 | None:intergenic | 50.0% |
| TGCTGGCACCAAAGACTTTG+TGG | - | chr5_2:67656193-67656212 | None:intergenic | 50.0% | |
| TCCCGCATACATAGGGTCTA+AGG | + | chr5_2:67656479-67656498 | Msa0783550:intron | 50.0% | |
| GCACCCATGCATCCATAAAC+TGG | - | chr5_2:67656943-67656962 | None:intergenic | 50.0% | |
| GCATGCAGCACAAGGAGTAG+TGG | - | chr5_2:67656087-67656106 | None:intergenic | 55.0% | |
| ! | TTTGAGACGAAGGTGTGCCC+AGG | + | chr5_2:67656112-67656131 | Msa0783550:CDS | 55.0% |
| GCATGCAGCACAAGGAGTAG+TGG | - | chr5_2:67656087-67656106 | None:intergenic | 55.0% | |
| ! | TTTGAGACGAAGGTGTGCCC+AGG | + | chr5_2:67656112-67656131 | Msa0783550:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 67655713 | 67657380 | 67655713 | ID=Msa0783550;Name=Msa0783550 |
| chr5_2 | mRNA | 67655713 | 67657380 | 67655713 | ID=Msa0783550-mRNA-1;Parent=Msa0783550;Name=Msa0783550-mRNA-1;_AED=0.05;_eAED=0.05;_QI=124|1|1|1|0.5|0.66|3|177|196 |
| chr5_2 | exon | 67655713 | 67655850 | 67655713 | ID=Msa0783550-mRNA-1:exon:20255;Parent=Msa0783550-mRNA-1 |
| chr5_2 | exon | 67655992 | 67656232 | 67655992 | ID=Msa0783550-mRNA-1:exon:20256;Parent=Msa0783550-mRNA-1 |
| chr5_2 | exon | 67656868 | 67657380 | 67656868 | ID=Msa0783550-mRNA-1:exon:20257;Parent=Msa0783550-mRNA-1 |
| chr5_2 | five_prime_UTR | 67655713 | 67655836 | 67655713 | ID=Msa0783550-mRNA-1:five_prime_utr;Parent=Msa0783550-mRNA-1 |
| chr5_2 | CDS | 67655837 | 67655850 | 67655837 | ID=Msa0783550-mRNA-1:cds;Parent=Msa0783550-mRNA-1 |
| chr5_2 | CDS | 67655992 | 67656232 | 67655992 | ID=Msa0783550-mRNA-1:cds;Parent=Msa0783550-mRNA-1 |
| chr5_2 | CDS | 67656868 | 67657203 | 67656868 | ID=Msa0783550-mRNA-1:cds;Parent=Msa0783550-mRNA-1 |
| chr5_2 | three_prime_UTR | 67657204 | 67657380 | 67657204 | ID=Msa0783550-mRNA-1:three_prime_utr;Parent=Msa0783550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
