AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0789810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789810 MtrunA17_Chr1g0200421 94.036 503 25 2 1 498 1 503 0.0 944
Msa0789810 MtrunA17_Chr2g0320341 60.870 161 61 1 231 389 229 389 1.01e-70 230
Msa0789810 MtrunA17_Chr8g0382121 50.769 195 92 3 231 424 110 301 2.13e-64 211
Msa0789810 MtrunA17_Chr3g0123941 59.036 166 58 2 231 393 122 280 1.08e-63 210
Msa0789810 MtrunA17_Chr4g0053341 38.967 213 113 10 179 387 25 224 6.49e-31 119
Msa0789810 MtrunA17_Chr8g0352011 36.279 215 104 9 201 397 131 330 7.47e-27 111
Msa0789810 MtrunA17_Chr1g0198651 41.447 152 83 6 239 387 107 255 2.44e-26 108
Msa0789810 MtrunA17_Chr2g0321291 40.764 157 78 8 240 391 140 286 2.51e-26 108
Msa0789810 MtrunA17_Chr5g0422571 35.176 199 114 8 191 387 67 252 8.75e-26 107
Msa0789810 MtrunA17_Chr4g0026521 35.955 178 97 5 240 415 125 287 1.56e-25 106
Msa0789810 MtrunA17_Chr7g0258011 38.667 150 82 5 240 386 183 325 5.02e-25 105
Msa0789810 MtrunA17_Chr2g0328921 39.597 149 80 5 240 385 145 286 5.44e-25 105
Msa0789810 MtrunA17_Chr7g0263941 35.762 151 85 4 231 381 48 186 1.86e-24 105
Msa0789810 MtrunA17_Chr1g0210821 35.762 151 85 4 231 381 58 196 2.39e-24 106
Msa0789810 MtrunA17_Chr4g0029521 34.868 152 86 4 231 381 52 191 2.53e-24 105
Msa0789810 MtrunA17_Chr1g0173841 38.667 150 82 5 240 386 222 364 4.31e-24 103
Msa0789810 MtrunA17_Chr8g0342421 34.731 167 92 5 219 381 61 214 7.04e-24 104
Msa0789810 MtrunA17_Chr1g0162971 35.099 151 86 4 231 381 55 193 9.37e-24 103
Msa0789810 MtrunA17_Chr7g0268961 30.736 231 135 8 231 456 36 246 1.13e-23 103
Msa0789810 MtrunA17_Chr2g0330171 34.503 171 95 5 215 381 41 198 2.67e-23 102
Msa0789810 MtrunA17_Chr1g0181381 35.294 153 84 4 231 381 52 191 3.47e-23 102
Msa0789810 MtrunA17_Chr3g0141431 35.714 154 88 3 231 384 36 178 5.32e-23 101
Msa0789810 MtrunA17_Chr1g0191991 34.641 153 88 3 229 381 75 215 5.94e-23 102
Msa0789810 MtrunA17_Chr2g0326381 35.099 151 87 4 231 381 46 185 6.50e-23 100
Msa0789810 MtrunA17_Chr1g0185121 35.526 152 85 4 231 381 54 193 6.60e-23 101
Msa0789810 MtrunA17_Chr1g0199101 33.775 151 88 4 231 381 61 199 6.96e-23 102
Msa0789810 MtrunA17_Chr1g0163001 34.437 151 87 4 231 381 57 195 7.16e-23 101
Msa0789810 MtrunA17_Chr4g0040571 33.775 151 88 3 231 381 53 191 7.29e-23 101
Msa0789810 MtrunA17_Chr8g0373541 34.437 151 87 3 231 381 47 185 9.15e-23 101
Msa0789810 MtrunA17_Chr1g0151351 35.099 151 87 3 231 381 55 194 2.95e-22 99.4
Msa0789810 MtrunA17_Chr2g0324991 32.237 152 91 3 231 382 6 145 6.64e-18 80.9
Msa0789810 MtrunA17_Chr6g0479921 35.333 150 82 7 231 378 43 179 1.92e-17 84.7
Msa0789810 MtrunA17_Chr8g0375521 32.215 149 89 5 231 378 41 178 8.73e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0789810 AT1G34370.2 54.951 515 194 8 1 496 1 496 2.06e-178 510
Msa0789810 AT1G34370.1 54.951 515 194 8 1 496 1 496 2.06e-178 510
Msa0789810 AT1G34370.3 70.588 289 75 4 214 496 2 286 4.12e-141 407
Msa0789810 AT5G22890.1 39.828 349 180 9 64 401 39 368 3.43e-75 241
Msa0789810 AT1G51220.1 37.423 163 92 5 228 387 160 315 9.77e-26 108
Msa0789810 AT1G34790.1 40.645 155 79 7 238 387 136 282 2.03e-25 106
Msa0789810 AT1G13290.1 38.764 178 96 8 220 392 76 245 2.33e-25 106
Msa0789810 AT3G20880.1 39.073 151 82 5 240 387 250 393 1.03e-24 106
Msa0789810 AT1G08290.1 33.333 201 122 6 193 387 124 318 1.53e-24 104
Msa0789810 AT3G45260.2 33.918 171 98 4 231 401 53 208 3.31e-24 105
Msa0789810 AT3G45260.1 33.918 171 98 4 231 401 53 208 3.31e-24 105
Msa0789810 AT5G44160.1 34.437 151 87 3 231 381 51 189 3.91e-24 105
Msa0789810 AT5G66730.1 34.437 151 87 3 231 381 46 184 5.61e-24 105
Msa0789810 AT5G44160.2 34.437 151 87 3 231 381 12 150 6.14e-24 104
Msa0789810 AT3G57670.1 36.364 176 96 6 215 382 181 348 6.84e-24 103
Msa0789810 AT5G60470.2 35.135 148 85 3 231 378 58 194 1.52e-23 103
Msa0789810 AT5G60470.3 35.135 148 85 3 231 378 54 190 1.63e-23 103
Msa0789810 AT1G03840.1 34.437 151 87 3 231 381 55 193 1.68e-23 103
Msa0789810 AT1G03840.2 34.437 151 87 3 231 381 53 191 1.82e-23 103
Msa0789810 AT5G60470.1 35.135 148 85 3 231 378 49 185 1.92e-23 103
Msa0789810 AT5G03150.1 35.294 153 84 4 231 381 67 206 2.17e-23 103
Msa0789810 AT1G14580.1 33.775 151 88 3 231 381 67 205 4.01e-23 102
Msa0789810 AT1G14580.2 33.775 151 88 3 231 381 67 205 4.01e-23 102
Msa0789810 AT1G14580.3 33.775 151 88 3 231 381 81 219 4.67e-23 102
Msa0789810 AT1G55110.3 33.775 151 89 3 231 381 77 216 8.35e-23 101
Msa0789810 AT1G55110.1 33.775 151 89 3 231 381 77 216 8.35e-23 101
Msa0789810 AT1G55110.2 33.775 151 89 3 231 381 77 216 8.35e-23 101
Msa0789810 AT2G02080.1 33.775 151 88 3 231 381 68 206 9.29e-23 101
Msa0789810 AT2G02080.4 33.775 151 88 3 231 381 68 206 9.29e-23 101
Msa0789810 AT2G02080.5 33.775 151 88 3 231 381 68 206 9.29e-23 101
Msa0789810 AT2G02080.3 33.775 151 88 3 231 381 68 206 9.29e-23 101
Msa0789810 AT3G50700.1 35.762 151 85 3 231 381 48 186 9.64e-23 101
Msa0789810 AT2G02070.2 33.775 151 88 3 231 381 66 204 1.41e-22 101
Msa0789810 AT2G02070.1 33.775 151 88 3 231 381 66 204 1.41e-22 101
Msa0789810 AT3G13810.4 34.437 151 88 3 231 381 84 223 1.77e-22 100
Msa0789810 AT3G13810.1 34.437 151 88 3 231 381 84 223 1.77e-22 100
Msa0789810 AT3G13810.3 35.220 159 91 4 223 381 64 210 1.79e-22 100
Msa0789810 AT3G13810.5 34.437 151 88 3 231 381 79 218 1.82e-22 100
Msa0789810 AT3G13810.2 35.220 159 91 4 223 381 78 224 1.82e-22 100
Msa0789810 AT3G13810.6 34.437 151 88 3 231 381 65 204 1.93e-22 100
Msa0789810 AT4G02670.2 35.099 151 87 3 231 381 69 208 2.07e-21 96.7
Msa0789810 AT4G02670.1 35.099 151 87 3 231 381 67 206 2.23e-21 96.7
Msa0789810 AT2G02080.6 34.752 141 80 3 241 381 1 129 1.33e-20 94.7
Msa0789810 AT2G02080.2 34.752 141 80 3 241 381 1 129 1.33e-20 94.7
Msa0789810 AT1G25250.1 33.333 159 95 5 221 378 14 162 9.50e-18 85.1
Msa0789810 AT1G68130.1 34.899 149 85 6 231 378 55 192 3.20e-17 84.3
Msa0789810 AT1G25250.3 34.228 149 87 5 231 378 47 185 4.40e-17 83.6
Msa0789810 AT2G01940.1 32.886 149 88 5 231 378 58 195 7.77e-17 83.2
Msa0789810 AT2G01940.3 32.847 137 80 5 231 366 58 183 3.43e-14 75.1

Find 109 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTCCCACCCTGTAAAA+AGG 0.182953 5_3:-437674 None:intergenic
TCAAATCCTTCAAGTGAAAA+TGG 0.239095 5_3:+438835 Msa0789810:CDS
CATGATTCACCACCAGATTT+AGG 0.245532 5_3:-439030 None:intergenic
TTTAATTATGCTCCTAAATC+TGG 0.266493 5_3:+439018 Msa0789810:CDS
TGCACCATTTCACAATTATT+AGG 0.289796 5_3:-438160 None:intergenic
AACTTTGAAGGCTGTAACTT+TGG 0.308561 5_3:+438922 Msa0789810:CDS
AACACTGTGGCAAGGATAAA+TGG 0.316031 5_3:+438632 Msa0789810:CDS
GCAAAACCACACAAAGAAAC+TGG 0.316849 5_3:+438406 Msa0789810:CDS
TCGAACTCAGTCTGTGATTC+CGG 0.317053 5_3:+437727 Msa0789810:CDS
GGAAGCATGAACTTCTGTTT+TGG 0.324815 5_3:+438811 Msa0789810:CDS
AACGGGATTAGCCTTCCTTT+TGG 0.342253 5_3:+438058 Msa0789810:CDS
TTCTCACCTTTGAACTTTGA+AGG 0.355262 5_3:+438910 Msa0789810:CDS
GGAGTCTTCTCCCTTCTGTT+AGG 0.361673 5_3:+437987 Msa0789810:CDS
CTGGGCTAGGTCCTCTTCCT+TGG 0.390105 5_3:+437604 Msa0789810:CDS
GAAGCTTGTGTGCTAACAAC+TGG 0.402631 5_3:+437585 Msa0789810:CDS
AAATGGATCTGATAGCATTA+TGG 0.409807 5_3:+438852 Msa0789810:CDS
GACAGCTTAGCCAACTTAAC+GGG 0.414271 5_3:+438041 Msa0789810:CDS
TTTCGATCAGTCCATTCATA+AGG 0.416970 5_3:+438132 Msa0789810:CDS
GAATAGCCGGTGTATGGCCT+TGG 0.434473 5_3:-438717 None:intergenic
CCGGTGTATGGCCTTGGAAA+AGG 0.435593 5_3:-438711 None:intergenic
AAGATTGAAATGAATCCAAC+TGG 0.437188 5_3:+437563 None:intergenic
AGTTCACGCGGTTGTTCAAA+AGG 0.437372 5_3:-437893 None:intergenic
ACATAAAGACGAAGAAGATA+TGG 0.453200 5_3:+438207 Msa0789810:CDS
GTGGCTCGGCAGATCCTTTG+TGG 0.455339 5_3:-438750 None:intergenic
ATTAGGTACATCCTTATGAA+TGG 0.455946 5_3:-438143 None:intergenic
CGGTGTATGGCCTTGGAAAA+GGG 0.459444 5_3:-438710 None:intergenic
GAATCTTCAAATGGAGGTTG+AGG 0.464007 5_3:-438961 None:intergenic
CAATCAAATGCACAAGATCC+TGG 0.464133 5_3:-437853 None:intergenic
GAGCCTTCTGAATCTTCAAA+TGG 0.464855 5_3:-438970 None:intergenic
TGATATTAAGATCACTGATC+AGG 0.471924 5_3:+437751 Msa0789810:CDS
GTTACGCTTGCAGCCACCAT+AGG 0.472872 5_3:-438464 None:intergenic
CCATACACCGGCTATTCCTT+CGG 0.472983 5_3:+438723 Msa0789810:CDS
AAACGAGTAAACTTCAAGAC+TGG 0.479681 5_3:+437774 Msa0789810:CDS
GGACAGCTTAGCCAACTTAA+CGG 0.484196 5_3:+438040 Msa0789810:CDS
CGATGTGACACCAGAGAAAA+CGG 0.484392 5_3:+438778 Msa0789810:CDS
GAATACCTCTTGATAAGCTT+CGG 0.485383 5_3:-438436 None:intergenic
AAAGGTGAGAAATAATTGAT+AGG 0.486126 5_3:-438898 None:intergenic
CCGAAGGAATAGCCGGTGTA+TGG 0.486962 5_3:-438723 None:intergenic
TTGAAGGCTGTAACTTTGGT+GGG 0.487577 5_3:+438926 Msa0789810:CDS
TTCTGTACAATCTGTGGCAA+GGG 0.495568 5_3:+438310 Msa0789810:CDS
GTTCAGTTGATCTCTACTGC+AGG 0.497725 5_3:+437965 Msa0789810:CDS
CTCCCTTCTGTTAGGAACTC+CGG 0.500730 5_3:+437995 Msa0789810:CDS
TTTGAAGGCTGTAACTTTGG+TGG 0.506070 5_3:+438925 Msa0789810:CDS
CAACTTGTGCCTGTTCCAAA+AGG 0.509708 5_3:-438073 None:intergenic
TCTCTGGTGTCACATCGATC+AGG 0.512441 5_3:-438772 None:intergenic
CCTCTTGATAAGCTTCGGTT+CGG 0.514238 5_3:-438431 None:intergenic
GAAGGCTAATCCCGTTAAGT+TGG 0.516535 5_3:-438051 None:intergenic
ACAAACACAAGTCCGTTGCT+TGG 0.519115 5_3:+438019 Msa0789810:CDS
GACGAAGAAGATATGGAAGA+GGG 0.519377 5_3:+438214 Msa0789810:CDS
TGTACCTAATAATTGTGAAA+TGG 0.520470 5_3:+438156 Msa0789810:CDS
AGACGAAGAAGATATGGAAG+AGG 0.521674 5_3:+438213 Msa0789810:CDS
CGAATGCACATGCGAGGCCA+TGG 0.526902 5_3:+438355 Msa0789810:CDS
AATCTTCAAATGGAGGTTGA+GGG 0.529470 5_3:-438960 None:intergenic
AAGAGGTATTCGTGTCCCTA+TGG 0.530145 5_3:+438448 Msa0789810:CDS
GGTTGGTTGATTTCTTTGAA+AGG 0.533908 5_3:-437701 None:intergenic
TTTGGAACAGGCACAAGTTG+TGG 0.534584 5_3:+438076 Msa0789810:CDS
TGTGTGCTAACAACTGGGCT+AGG 0.534923 5_3:+437591 Msa0789810:CDS
GAGGGTGAGAATCTTGCTCC+TGG 0.536278 5_3:+438232 Msa0789810:CDS
AGAAAAGATTCATCAGCTCC+AGG 0.538362 5_3:+437835 Msa0789810:CDS
GTCACATCGATCAGGTGGCT+CGG 0.538841 5_3:-438764 None:intergenic
TCGGACCCAGTTTCTTTGTG+TGG 0.543092 5_3:-438412 None:intergenic
TCAGTGATCTTAATATCATC+CGG 0.547189 5_3:-437746 None:intergenic
CAACGGACTTGTGTTTGTAC+CGG 0.548811 5_3:-438014 None:intergenic
TGGTCTTCCGAAGGAATAGC+CGG 0.552762 5_3:-438730 None:intergenic
GTTTGTAACCCATTCCCAGT+GGG 0.558849 5_3:-437629 None:intergenic
TTACGCTTGCAGCCACCATA+GGG 0.561037 5_3:-438463 None:intergenic
CAGACTGAGTTCGAGATGGT+TGG 0.568725 5_3:-437718 None:intergenic
TTACAGCCTTCAAAGTTCAA+AGG 0.572217 5_3:-438916 None:intergenic
GTACCGGAGTTCCTAACAGA+AGG 0.573753 5_3:-437998 None:intergenic
GATAAATGGCTTTGTTCATG+TGG 0.574687 5_3:+438646 Msa0789810:CDS
TTTCTGTACAATCTGTGGCA+AGG 0.576014 5_3:+438309 Msa0789810:CDS
GATCCTTTGTGGTCTTCCGA+AGG 0.576114 5_3:-438739 None:intergenic
AACGAGTAAACTTCAAGACT+GGG 0.577049 5_3:+437775 Msa0789810:CDS
TTCAGTTGATCTCTACTGCA+GGG 0.580172 5_3:+437966 Msa0789810:CDS
TTGTGCCTGTTCCAAAAGGA+AGG 0.586342 5_3:-438069 None:intergenic
CCTTCTGAATCTTCAAATGG+AGG 0.588246 5_3:-438967 None:intergenic
CAAAACCACACAAAGAAACT+GGG 0.588364 5_3:+438407 Msa0789810:CDS
TGGTGGCTGCAAGCGTAACA+AGG 0.588657 5_3:+438468 Msa0789810:CDS
AATTATGCTCCTAAATCTGG+TGG 0.589400 5_3:+439021 Msa0789810:CDS
TTAGCACACAAGCTTCCAGT+TGG 0.591117 5_3:-437578 None:intergenic
AGAGAAAACGGTGCTGTGGT+AGG 0.594886 5_3:+438790 Msa0789810:CDS
AAGCTTATTCAACATAACAC+TGG 0.596534 5_3:-437801 None:intergenic
GATAGCATTATGGATGTGAA+AGG 0.598382 5_3:+438862 Msa0789810:CDS
ACACATAAAATAGTCTTCAG+AGG 0.602166 5_3:-438508 None:intergenic
TTGTAACCCATTCCCAGTGG+GGG 0.606052 5_3:-437627 None:intergenic
CCTCCATTTGAAGATTCAGA+AGG 0.608580 5_3:+438967 Msa0789810:CDS
AGGTATTCGTGTCCCTATGG+TGG 0.612960 5_3:+438451 Msa0789810:CDS
TGGCTAAGCTGTCCAAGCAA+CGG 0.613429 5_3:-438031 None:intergenic
TGTAAAATCTCATATGAACC+AGG 0.616349 5_3:-438250 None:intergenic
CACCAGAGAAAACGGTGCTG+TGG 0.617127 5_3:+438786 Msa0789810:CDS
CTGGTGTCACATCGATCAGG+TGG 0.620999 5_3:-438769 None:intergenic
TACCGGAGTTCCTAACAGAA+GGG 0.630611 5_3:-437997 None:intergenic
ACACATTTCTGTACAATCTG+TGG 0.631898 5_3:+438304 Msa0789810:CDS
TTTGTAACCCATTCCCAGTG+GGG 0.637498 5_3:-437628 None:intergenic
ATCACAGACTGAGTTCGAGA+TGG 0.643055 5_3:-437722 None:intergenic
AAGCTTGTGTGCTAACAACT+GGG 0.643592 5_3:+437586 Msa0789810:CDS
CGTTTGTAACCCATTCCCAG+TGG 0.646958 5_3:-437630 None:intergenic
AATCTTCGAATGCACATGCG+AGG 0.648293 5_3:+438349 Msa0789810:CDS
TCATGAGAAACACTGTGGCA+AGG 0.649401 5_3:+438624 Msa0789810:CDS
TGACTGAAAACTTCTTCGTG+TGG 0.651786 5_3:-438585 None:intergenic
CTGTGGCAAGGGTTTCAAGA+GGG 0.652480 5_3:+438321 Msa0789810:CDS
AGAAATGTGTGTGAGGTGCA+AGG 0.661202 5_3:-438291 None:intergenic
CCGAACCGAAGCTTATCAAG+AGG 0.666381 5_3:+438431 Msa0789810:CDS
TCTGTGGCAAGGGTTTCAAG+AGG 0.676093 5_3:+438320 Msa0789810:CDS
TCTTGAGTCACAAGTTCACG+CGG 0.701065 5_3:-437905 None:intergenic
AATGGTGCAAAACAATACTG+TGG 0.704627 5_3:+438174 Msa0789810:CDS
ATTCCTTCGGAAGACCACAA+AGG 0.713111 5_3:+438736 Msa0789810:CDS
ATTGTACAGAAATGTGTGTG+AGG 0.743882 5_3:-438298 None:intergenic
AAAACTCATGAGAAACACTG+TGG 0.781827 5_3:+438619 Msa0789810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTGAATAAGCTTTCATTTT+TGG + chr5_3:437811-437830 Msa0789810:CDS 25.0%
! TGTACCTAATAATTGTGAAA+TGG + chr5_3:438156-438175 Msa0789810:CDS 25.0%
! AAAGGTGAGAAATAATTGAT+AGG - chr5_3:438901-438920 None:intergenic 25.0%
! TTTAATTATGCTCCTAAATC+TGG + chr5_3:439018-439037 Msa0789810:CDS 25.0%
!! GTTGAATAAGCTTTCATTTT+TGG + chr5_3:437811-437830 Msa0789810:CDS 25.0%
! TGTACCTAATAATTGTGAAA+TGG + chr5_3:438156-438175 Msa0789810:CDS 25.0%
! AAAGGTGAGAAATAATTGAT+AGG - chr5_3:438901-438920 None:intergenic 25.0%
! TTTAATTATGCTCCTAAATC+TGG + chr5_3:439018-439037 Msa0789810:CDS 25.0%
TCAGTGATCTTAATATCATC+CGG - chr5_3:437749-437768 None:intergenic 30.0%
TGATATTAAGATCACTGATC+AGG + chr5_3:437751-437770 Msa0789810:CDS 30.0%
AAGCTTATTCAACATAACAC+TGG - chr5_3:437804-437823 None:intergenic 30.0%
ATTAGGTACATCCTTATGAA+TGG - chr5_3:438146-438165 None:intergenic 30.0%
TGCACCATTTCACAATTATT+AGG - chr5_3:438163-438182 None:intergenic 30.0%
ACATAAAGACGAAGAAGATA+TGG + chr5_3:438207-438226 Msa0789810:CDS 30.0%
TGTAAAATCTCATATGAACC+AGG - chr5_3:438253-438272 None:intergenic 30.0%
ACACATAAAATAGTCTTCAG+AGG - chr5_3:438511-438530 None:intergenic 30.0%
TCAAATCCTTCAAGTGAAAA+TGG + chr5_3:438835-438854 Msa0789810:CDS 30.0%
AAATGGATCTGATAGCATTA+TGG + chr5_3:438852-438871 Msa0789810:CDS 30.0%
TCAGTGATCTTAATATCATC+CGG - chr5_3:437749-437768 None:intergenic 30.0%
TGATATTAAGATCACTGATC+AGG + chr5_3:437751-437770 Msa0789810:CDS 30.0%
AAGCTTATTCAACATAACAC+TGG - chr5_3:437804-437823 None:intergenic 30.0%
ATTAGGTACATCCTTATGAA+TGG - chr5_3:438146-438165 None:intergenic 30.0%
TGCACCATTTCACAATTATT+AGG - chr5_3:438163-438182 None:intergenic 30.0%
ACATAAAGACGAAGAAGATA+TGG + chr5_3:438207-438226 Msa0789810:CDS 30.0%
TGTAAAATCTCATATGAACC+AGG - chr5_3:438253-438272 None:intergenic 30.0%
ACACATAAAATAGTCTTCAG+AGG - chr5_3:438511-438530 None:intergenic 30.0%
TCAAATCCTTCAAGTGAAAA+TGG + chr5_3:438835-438854 Msa0789810:CDS 30.0%
AAATGGATCTGATAGCATTA+TGG + chr5_3:438852-438871 Msa0789810:CDS 30.0%
! GGTTGGTTGATTTCTTTGAA+AGG - chr5_3:437704-437723 None:intergenic 35.0%
AAACGAGTAAACTTCAAGAC+TGG + chr5_3:437774-437793 Msa0789810:CDS 35.0%
AACGAGTAAACTTCAAGACT+GGG + chr5_3:437775-437794 Msa0789810:CDS 35.0%
!!! GTAGTTGCACTGTTATTTTG+TGG - chr5_3:438109-438128 None:intergenic 35.0%
TTTCGATCAGTCCATTCATA+AGG + chr5_3:438132-438151 Msa0789810:CDS 35.0%
AATGGTGCAAAACAATACTG+TGG + chr5_3:438174-438193 Msa0789810:CDS 35.0%
ATTGTACAGAAATGTGTGTG+AGG - chr5_3:438301-438320 None:intergenic 35.0%
ACACATTTCTGTACAATCTG+TGG + chr5_3:438304-438323 Msa0789810:CDS 35.0%
!! TTCTTTGTGTGGTTTTGCAA+GGG - chr5_3:438404-438423 None:intergenic 35.0%
!! TTTCTTTGTGTGGTTTTGCA+AGG - chr5_3:438405-438424 None:intergenic 35.0%
CAAAACCACACAAAGAAACT+GGG + chr5_3:438407-438426 Msa0789810:CDS 35.0%
GAATACCTCTTGATAAGCTT+CGG - chr5_3:438439-438458 None:intergenic 35.0%
AAAACTCATGAGAAACACTG+TGG + chr5_3:438619-438638 Msa0789810:CDS 35.0%
!! GATAAATGGCTTTGTTCATG+TGG + chr5_3:438646-438665 Msa0789810:CDS 35.0%
! TCAAGGAAAGACAAGCTTTT+CGG + chr5_3:438679-438698 Msa0789810:CDS 35.0%
! TCAGATCCATTTTCACTTGA+AGG - chr5_3:438844-438863 None:intergenic 35.0%
GATAGCATTATGGATGTGAA+AGG + chr5_3:438862-438881 Msa0789810:CDS 35.0%
TTCTCACCTTTGAACTTTGA+AGG + chr5_3:438910-438929 Msa0789810:CDS 35.0%
TTACAGCCTTCAAAGTTCAA+AGG - chr5_3:438919-438938 None:intergenic 35.0%
! AACTTTGAAGGCTGTAACTT+TGG + chr5_3:438922-438941 Msa0789810:CDS 35.0%
AATCTTCAAATGGAGGTTGA+GGG - chr5_3:438963-438982 None:intergenic 35.0%
! CTCTTTCTCTTTTCTCATGT+CGG + chr5_3:438990-439009 Msa0789810:CDS 35.0%
! TCTTTCTCTTTTCTCATGTC+GGG + chr5_3:438991-439010 Msa0789810:CDS 35.0%
AATTATGCTCCTAAATCTGG+TGG + chr5_3:439021-439040 Msa0789810:CDS 35.0%
! GGTTGGTTGATTTCTTTGAA+AGG - chr5_3:437704-437723 None:intergenic 35.0%
AAACGAGTAAACTTCAAGAC+TGG + chr5_3:437774-437793 Msa0789810:CDS 35.0%
AACGAGTAAACTTCAAGACT+GGG + chr5_3:437775-437794 Msa0789810:CDS 35.0%
!!! GTAGTTGCACTGTTATTTTG+TGG - chr5_3:438109-438128 None:intergenic 35.0%
TTTCGATCAGTCCATTCATA+AGG + chr5_3:438132-438151 Msa0789810:CDS 35.0%
AATGGTGCAAAACAATACTG+TGG + chr5_3:438174-438193 Msa0789810:CDS 35.0%
ATTGTACAGAAATGTGTGTG+AGG - chr5_3:438301-438320 None:intergenic 35.0%
ACACATTTCTGTACAATCTG+TGG + chr5_3:438304-438323 Msa0789810:CDS 35.0%
!! TTCTTTGTGTGGTTTTGCAA+GGG - chr5_3:438404-438423 None:intergenic 35.0%
!! TTTCTTTGTGTGGTTTTGCA+AGG - chr5_3:438405-438424 None:intergenic 35.0%
CAAAACCACACAAAGAAACT+GGG + chr5_3:438407-438426 Msa0789810:CDS 35.0%
GAATACCTCTTGATAAGCTT+CGG - chr5_3:438439-438458 None:intergenic 35.0%
AAAACTCATGAGAAACACTG+TGG + chr5_3:438619-438638 Msa0789810:CDS 35.0%
!! GATAAATGGCTTTGTTCATG+TGG + chr5_3:438646-438665 Msa0789810:CDS 35.0%
! TCAAGGAAAGACAAGCTTTT+CGG + chr5_3:438679-438698 Msa0789810:CDS 35.0%
! TCAGATCCATTTTCACTTGA+AGG - chr5_3:438844-438863 None:intergenic 35.0%
GATAGCATTATGGATGTGAA+AGG + chr5_3:438862-438881 Msa0789810:CDS 35.0%
TTCTCACCTTTGAACTTTGA+AGG + chr5_3:438910-438929 Msa0789810:CDS 35.0%
TTACAGCCTTCAAAGTTCAA+AGG - chr5_3:438919-438938 None:intergenic 35.0%
! AACTTTGAAGGCTGTAACTT+TGG + chr5_3:438922-438941 Msa0789810:CDS 35.0%
AATCTTCAAATGGAGGTTGA+GGG - chr5_3:438963-438982 None:intergenic 35.0%
! CTCTTTCTCTTTTCTCATGT+CGG + chr5_3:438990-439009 Msa0789810:CDS 35.0%
! TCTTTCTCTTTTCTCATGTC+GGG + chr5_3:438991-439010 Msa0789810:CDS 35.0%
AATTATGCTCCTAAATCTGG+TGG + chr5_3:439021-439040 Msa0789810:CDS 35.0%
AAGCTTGTGTGCTAACAACT+GGG + chr5_3:437586-437605 Msa0789810:CDS 40.0%
AATTCCCACCCTGTAAAAAG+GGG - chr5_3:437675-437694 None:intergenic 40.0%
CAATTCCCACCCTGTAAAAA+GGG - chr5_3:437676-437695 None:intergenic 40.0%
TCAATTCCCACCCTGTAAAA+AGG - chr5_3:437677-437696 None:intergenic 40.0%
AGAAAAGATTCATCAGCTCC+AGG + chr5_3:437835-437854 Msa0789810:CDS 40.0%
CAATCAAATGCACAAGATCC+TGG - chr5_3:437856-437875 None:intergenic 40.0%
TTCAGTTGATCTCTACTGCA+GGG + chr5_3:437966-437985 Msa0789810:CDS 40.0%
!!! ATTAGCCTTCCTTTTGGAAC+AGG + chr5_3:438064-438083 Msa0789810:CDS 40.0%
AGACGAAGAAGATATGGAAG+AGG + chr5_3:438213-438232 Msa0789810:CDS 40.0%
GACGAAGAAGATATGGAAGA+GGG + chr5_3:438214-438233 Msa0789810:CDS 40.0%
TTTCTGTACAATCTGTGGCA+AGG + chr5_3:438309-438328 Msa0789810:CDS 40.0%
TTCTGTACAATCTGTGGCAA+GGG + chr5_3:438310-438329 Msa0789810:CDS 40.0%
!! GAGTTTTGTACTCATCACCA+TGG - chr5_3:438375-438394 None:intergenic 40.0%
GCAAAACCACACAAAGAAAC+TGG + chr5_3:438406-438425 Msa0789810:CDS 40.0%
! CACAGTGTGTTCTTTTGTAG+TGG - chr5_3:438540-438559 None:intergenic 40.0%
TGACTGAAAACTTCTTCGTG+TGG - chr5_3:438588-438607 None:intergenic 40.0%
! CACGAAGAAGTTTTCAGTCA+TGG + chr5_3:438588-438607 Msa0789810:CDS 40.0%
AACACTGTGGCAAGGATAAA+TGG + chr5_3:438632-438651 Msa0789810:CDS 40.0%
! CATGTGGCACAACATTTTCA+AGG + chr5_3:438662-438681 Msa0789810:CDS 40.0%
!! GGAAGCATGAACTTCTGTTT+TGG + chr5_3:438811-438830 Msa0789810:CDS 40.0%
TTTGAAGGCTGTAACTTTGG+TGG + chr5_3:438925-438944 Msa0789810:CDS 40.0%
TTGAAGGCTGTAACTTTGGT+GGG + chr5_3:438926-438945 Msa0789810:CDS 40.0%
GAATCTTCAAATGGAGGTTG+AGG - chr5_3:438964-438983 None:intergenic 40.0%
CCTTCTGAATCTTCAAATGG+AGG - chr5_3:438970-438989 None:intergenic 40.0%
CCTCCATTTGAAGATTCAGA+AGG + chr5_3:438967-438986 Msa0789810:CDS 40.0%
GAGCCTTCTGAATCTTCAAA+TGG - chr5_3:438973-438992 None:intergenic 40.0%
CATGATTCACCACCAGATTT+AGG - chr5_3:439033-439052 None:intergenic 40.0%
AAGCTTGTGTGCTAACAACT+GGG + chr5_3:437586-437605 Msa0789810:CDS 40.0%
AATTCCCACCCTGTAAAAAG+GGG - chr5_3:437675-437694 None:intergenic 40.0%
CAATTCCCACCCTGTAAAAA+GGG - chr5_3:437676-437695 None:intergenic 40.0%
TCAATTCCCACCCTGTAAAA+AGG - chr5_3:437677-437696 None:intergenic 40.0%
AGAAAAGATTCATCAGCTCC+AGG + chr5_3:437835-437854 Msa0789810:CDS 40.0%
CAATCAAATGCACAAGATCC+TGG - chr5_3:437856-437875 None:intergenic 40.0%
TTCAGTTGATCTCTACTGCA+GGG + chr5_3:437966-437985 Msa0789810:CDS 40.0%
!!! ATTAGCCTTCCTTTTGGAAC+AGG + chr5_3:438064-438083 Msa0789810:CDS 40.0%
AGACGAAGAAGATATGGAAG+AGG + chr5_3:438213-438232 Msa0789810:CDS 40.0%
GACGAAGAAGATATGGAAGA+GGG + chr5_3:438214-438233 Msa0789810:CDS 40.0%
TTTCTGTACAATCTGTGGCA+AGG + chr5_3:438309-438328 Msa0789810:CDS 40.0%
TTCTGTACAATCTGTGGCAA+GGG + chr5_3:438310-438329 Msa0789810:CDS 40.0%
!! GAGTTTTGTACTCATCACCA+TGG - chr5_3:438375-438394 None:intergenic 40.0%
GCAAAACCACACAAAGAAAC+TGG + chr5_3:438406-438425 Msa0789810:CDS 40.0%
! CACAGTGTGTTCTTTTGTAG+TGG - chr5_3:438540-438559 None:intergenic 40.0%
TGACTGAAAACTTCTTCGTG+TGG - chr5_3:438588-438607 None:intergenic 40.0%
! CACGAAGAAGTTTTCAGTCA+TGG + chr5_3:438588-438607 Msa0789810:CDS 40.0%
AACACTGTGGCAAGGATAAA+TGG + chr5_3:438632-438651 Msa0789810:CDS 40.0%
! CATGTGGCACAACATTTTCA+AGG + chr5_3:438662-438681 Msa0789810:CDS 40.0%
!! GGAAGCATGAACTTCTGTTT+TGG + chr5_3:438811-438830 Msa0789810:CDS 40.0%
TTTGAAGGCTGTAACTTTGG+TGG + chr5_3:438925-438944 Msa0789810:CDS 40.0%
TTGAAGGCTGTAACTTTGGT+GGG + chr5_3:438926-438945 Msa0789810:CDS 40.0%
GAATCTTCAAATGGAGGTTG+AGG - chr5_3:438964-438983 None:intergenic 40.0%
CCTTCTGAATCTTCAAATGG+AGG - chr5_3:438970-438989 None:intergenic 40.0%
CCTCCATTTGAAGATTCAGA+AGG + chr5_3:438967-438986 Msa0789810:CDS 40.0%
GAGCCTTCTGAATCTTCAAA+TGG - chr5_3:438973-438992 None:intergenic 40.0%
CATGATTCACCACCAGATTT+AGG - chr5_3:439033-439052 None:intergenic 40.0%
TTAGCACACAAGCTTCCAGT+TGG - chr5_3:437581-437600 None:intergenic 45.0%
GAAGCTTGTGTGCTAACAAC+TGG + chr5_3:437585-437604 Msa0789810:CDS 45.0%
TTTGTAACCCATTCCCAGTG+GGG - chr5_3:437631-437650 None:intergenic 45.0%
GTTTGTAACCCATTCCCAGT+GGG - chr5_3:437632-437651 None:intergenic 45.0%
! GTGTCCTTCCCCTTTTTACA+GGG + chr5_3:437664-437683 Msa0789810:CDS 45.0%
ATCACAGACTGAGTTCGAGA+TGG - chr5_3:437725-437744 None:intergenic 45.0%
TCGAACTCAGTCTGTGATTC+CGG + chr5_3:437727-437746 Msa0789810:CDS 45.0%
AGTTCACGCGGTTGTTCAAA+AGG - chr5_3:437896-437915 None:intergenic 45.0%
TCTTGAGTCACAAGTTCACG+CGG - chr5_3:437908-437927 None:intergenic 45.0%
GTTCAGTTGATCTCTACTGC+AGG + chr5_3:437965-437984 Msa0789810:CDS 45.0%
TACCGGAGTTCCTAACAGAA+GGG - chr5_3:438000-438019 None:intergenic 45.0%
! CAACGGACTTGTGTTTGTAC+CGG - chr5_3:438017-438036 None:intergenic 45.0%
ACAAACACAAGTCCGTTGCT+TGG + chr5_3:438019-438038 Msa0789810:CDS 45.0%
GGACAGCTTAGCCAACTTAA+CGG + chr5_3:438040-438059 Msa0789810:CDS 45.0%
GACAGCTTAGCCAACTTAAC+GGG + chr5_3:438041-438060 Msa0789810:CDS 45.0%
GAAGGCTAATCCCGTTAAGT+TGG - chr5_3:438054-438073 None:intergenic 45.0%
!!! AACGGGATTAGCCTTCCTTT+TGG + chr5_3:438058-438077 Msa0789810:CDS 45.0%
TTGTGCCTGTTCCAAAAGGA+AGG - chr5_3:438072-438091 None:intergenic 45.0%
CAACTTGTGCCTGTTCCAAA+AGG - chr5_3:438076-438095 None:intergenic 45.0%
! TTTGGAACAGGCACAAGTTG+TGG + chr5_3:438076-438095 Msa0789810:CDS 45.0%
AGAAATGTGTGTGAGGTGCA+AGG - chr5_3:438294-438313 None:intergenic 45.0%
AATCTTCGAATGCACATGCG+AGG + chr5_3:438349-438368 Msa0789810:CDS 45.0%
CCTCTTGATAAGCTTCGGTT+CGG - chr5_3:438434-438453 None:intergenic 45.0%
!! AAGAGGTATTCGTGTCCCTA+TGG + chr5_3:438448-438467 Msa0789810:CDS 45.0%
TCATGAGAAACACTGTGGCA+AGG + chr5_3:438624-438643 Msa0789810:CDS 45.0%
ATTCCTTCGGAAGACCACAA+AGG + chr5_3:438736-438755 Msa0789810:CDS 45.0%
CGATGTGACACCAGAGAAAA+CGG + chr5_3:438778-438797 Msa0789810:CDS 45.0%
TTAGCACACAAGCTTCCAGT+TGG - chr5_3:437581-437600 None:intergenic 45.0%
GAAGCTTGTGTGCTAACAAC+TGG + chr5_3:437585-437604 Msa0789810:CDS 45.0%
TTTGTAACCCATTCCCAGTG+GGG - chr5_3:437631-437650 None:intergenic 45.0%
GTTTGTAACCCATTCCCAGT+GGG - chr5_3:437632-437651 None:intergenic 45.0%
! GTGTCCTTCCCCTTTTTACA+GGG + chr5_3:437664-437683 Msa0789810:CDS 45.0%
ATCACAGACTGAGTTCGAGA+TGG - chr5_3:437725-437744 None:intergenic 45.0%
TCGAACTCAGTCTGTGATTC+CGG + chr5_3:437727-437746 Msa0789810:CDS 45.0%
AGTTCACGCGGTTGTTCAAA+AGG - chr5_3:437896-437915 None:intergenic 45.0%
TCTTGAGTCACAAGTTCACG+CGG - chr5_3:437908-437927 None:intergenic 45.0%
GTTCAGTTGATCTCTACTGC+AGG + chr5_3:437965-437984 Msa0789810:CDS 45.0%
TACCGGAGTTCCTAACAGAA+GGG - chr5_3:438000-438019 None:intergenic 45.0%
! CAACGGACTTGTGTTTGTAC+CGG - chr5_3:438017-438036 None:intergenic 45.0%
ACAAACACAAGTCCGTTGCT+TGG + chr5_3:438019-438038 Msa0789810:CDS 45.0%
GGACAGCTTAGCCAACTTAA+CGG + chr5_3:438040-438059 Msa0789810:CDS 45.0%
GACAGCTTAGCCAACTTAAC+GGG + chr5_3:438041-438060 Msa0789810:CDS 45.0%
GAAGGCTAATCCCGTTAAGT+TGG - chr5_3:438054-438073 None:intergenic 45.0%
!!! AACGGGATTAGCCTTCCTTT+TGG + chr5_3:438058-438077 Msa0789810:CDS 45.0%
TTGTGCCTGTTCCAAAAGGA+AGG - chr5_3:438072-438091 None:intergenic 45.0%
CAACTTGTGCCTGTTCCAAA+AGG - chr5_3:438076-438095 None:intergenic 45.0%
! TTTGGAACAGGCACAAGTTG+TGG + chr5_3:438076-438095 Msa0789810:CDS 45.0%
AGAAATGTGTGTGAGGTGCA+AGG - chr5_3:438294-438313 None:intergenic 45.0%
AATCTTCGAATGCACATGCG+AGG + chr5_3:438349-438368 Msa0789810:CDS 45.0%
CCTCTTGATAAGCTTCGGTT+CGG - chr5_3:438434-438453 None:intergenic 45.0%
!! AAGAGGTATTCGTGTCCCTA+TGG + chr5_3:438448-438467 Msa0789810:CDS 45.0%
TCATGAGAAACACTGTGGCA+AGG + chr5_3:438624-438643 Msa0789810:CDS 45.0%
ATTCCTTCGGAAGACCACAA+AGG + chr5_3:438736-438755 Msa0789810:CDS 45.0%
CGATGTGACACCAGAGAAAA+CGG + chr5_3:438778-438797 Msa0789810:CDS 45.0%
TGTGTGCTAACAACTGGGCT+AGG + chr5_3:437591-437610 Msa0789810:CDS 50.0%
TTGTAACCCATTCCCAGTGG+GGG - chr5_3:437630-437649 None:intergenic 50.0%
CGTTTGTAACCCATTCCCAG+TGG - chr5_3:437633-437652 None:intergenic 50.0%
GTAAAAAGGGGAAGGACACG+AGG - chr5_3:437663-437682 None:intergenic 50.0%
! CGTGTCCTTCCCCTTTTTAC+AGG + chr5_3:437663-437682 Msa0789810:CDS 50.0%
! TCCTTCCCCTTTTTACAGGG+TGG + chr5_3:437667-437686 Msa0789810:CDS 50.0%
! CCTTCCCCTTTTTACAGGGT+GGG + chr5_3:437668-437687 Msa0789810:CDS 50.0%
CAGACTGAGTTCGAGATGGT+TGG - chr5_3:437721-437740 None:intergenic 50.0%
GGAGTCTTCTCCCTTCTGTT+AGG + chr5_3:437987-438006 Msa0789810:CDS 50.0%
CTCCCTTCTGTTAGGAACTC+CGG + chr5_3:437995-438014 Msa0789810:CDS 50.0%
GTACCGGAGTTCCTAACAGA+AGG - chr5_3:438001-438020 None:intergenic 50.0%
TGGCTAAGCTGTCCAAGCAA+CGG - chr5_3:438034-438053 None:intergenic 50.0%
TCTGTGGCAAGGGTTTCAAG+AGG + chr5_3:438320-438339 Msa0789810:CDS 50.0%
CTGTGGCAAGGGTTTCAAGA+GGG + chr5_3:438321-438340 Msa0789810:CDS 50.0%
TCGGACCCAGTTTCTTTGTG+TGG - chr5_3:438415-438434 None:intergenic 50.0%
CCGAACCGAAGCTTATCAAG+AGG + chr5_3:438431-438450 Msa0789810:CDS 50.0%
AGGTATTCGTGTCCCTATGG+TGG + chr5_3:438451-438470 Msa0789810:CDS 50.0%
TTACGCTTGCAGCCACCATA+GGG - chr5_3:438466-438485 None:intergenic 50.0%
! GGACACATTGCCCTTTTCCA+AGG + chr5_3:438700-438719 Msa0789810:CDS 50.0%
! CGGTGTATGGCCTTGGAAAA+GGG - chr5_3:438713-438732 None:intergenic 50.0%
! CCTTTTCCAAGGCCATACAC+CGG + chr5_3:438711-438730 Msa0789810:CDS 50.0%
! CCATACACCGGCTATTCCTT+CGG + chr5_3:438723-438742 Msa0789810:CDS 50.0%
TGGTCTTCCGAAGGAATAGC+CGG - chr5_3:438733-438752 None:intergenic 50.0%
GATCCTTTGTGGTCTTCCGA+AGG - chr5_3:438742-438761 None:intergenic 50.0%
!! TCTCTGGTGTCACATCGATC+AGG - chr5_3:438775-438794 None:intergenic 50.0%
! TACCACAGCACCGTTTTCTC+TGG - chr5_3:438791-438810 None:intergenic 50.0%
!! AGAGAAAACGGTGCTGTGGT+AGG + chr5_3:438790-438809 Msa0789810:CDS 50.0%
TGTGTGCTAACAACTGGGCT+AGG + chr5_3:437591-437610 Msa0789810:CDS 50.0%
TTGTAACCCATTCCCAGTGG+GGG - chr5_3:437630-437649 None:intergenic 50.0%
CGTTTGTAACCCATTCCCAG+TGG - chr5_3:437633-437652 None:intergenic 50.0%
GTAAAAAGGGGAAGGACACG+AGG - chr5_3:437663-437682 None:intergenic 50.0%
! CGTGTCCTTCCCCTTTTTAC+AGG + chr5_3:437663-437682 Msa0789810:CDS 50.0%
! TCCTTCCCCTTTTTACAGGG+TGG + chr5_3:437667-437686 Msa0789810:CDS 50.0%
! CCTTCCCCTTTTTACAGGGT+GGG + chr5_3:437668-437687 Msa0789810:CDS 50.0%
CAGACTGAGTTCGAGATGGT+TGG - chr5_3:437721-437740 None:intergenic 50.0%
GGAGTCTTCTCCCTTCTGTT+AGG + chr5_3:437987-438006 Msa0789810:CDS 50.0%
CTCCCTTCTGTTAGGAACTC+CGG + chr5_3:437995-438014 Msa0789810:CDS 50.0%
GTACCGGAGTTCCTAACAGA+AGG - chr5_3:438001-438020 None:intergenic 50.0%
TGGCTAAGCTGTCCAAGCAA+CGG - chr5_3:438034-438053 None:intergenic 50.0%
TCTGTGGCAAGGGTTTCAAG+AGG + chr5_3:438320-438339 Msa0789810:CDS 50.0%
CTGTGGCAAGGGTTTCAAGA+GGG + chr5_3:438321-438340 Msa0789810:CDS 50.0%
TCGGACCCAGTTTCTTTGTG+TGG - chr5_3:438415-438434 None:intergenic 50.0%
CCGAACCGAAGCTTATCAAG+AGG + chr5_3:438431-438450 Msa0789810:CDS 50.0%
AGGTATTCGTGTCCCTATGG+TGG + chr5_3:438451-438470 Msa0789810:CDS 50.0%
TTACGCTTGCAGCCACCATA+GGG - chr5_3:438466-438485 None:intergenic 50.0%
! GGACACATTGCCCTTTTCCA+AGG + chr5_3:438700-438719 Msa0789810:CDS 50.0%
! CGGTGTATGGCCTTGGAAAA+GGG - chr5_3:438713-438732 None:intergenic 50.0%
! CCTTTTCCAAGGCCATACAC+CGG + chr5_3:438711-438730 Msa0789810:CDS 50.0%
! CCATACACCGGCTATTCCTT+CGG + chr5_3:438723-438742 Msa0789810:CDS 50.0%
TGGTCTTCCGAAGGAATAGC+CGG - chr5_3:438733-438752 None:intergenic 50.0%
GATCCTTTGTGGTCTTCCGA+AGG - chr5_3:438742-438761 None:intergenic 50.0%
!! TCTCTGGTGTCACATCGATC+AGG - chr5_3:438775-438794 None:intergenic 50.0%
! TACCACAGCACCGTTTTCTC+TGG - chr5_3:438791-438810 None:intergenic 50.0%
!! AGAGAAAACGGTGCTGTGGT+AGG + chr5_3:438790-438809 Msa0789810:CDS 50.0%
CCCACCCTGTAAAAAGGGGA+AGG - chr5_3:437671-437690 None:intergenic 55.0%
GAGGGTGAGAATCTTGCTCC+TGG + chr5_3:438232-438251 Msa0789810:CDS 55.0%
!! TGTGGTTTTGCAAGGGCTGC+TGG - chr5_3:438397-438416 None:intergenic 55.0%
GTTACGCTTGCAGCCACCAT+AGG - chr5_3:438467-438486 None:intergenic 55.0%
TGGTGGCTGCAAGCGTAACA+AGG + chr5_3:438468-438487 Msa0789810:CDS 55.0%
! CCGGTGTATGGCCTTGGAAA+AGG - chr5_3:438714-438733 None:intergenic 55.0%
GAATAGCCGGTGTATGGCCT+TGG - chr5_3:438720-438739 None:intergenic 55.0%
CCGAAGGAATAGCCGGTGTA+TGG - chr5_3:438726-438745 None:intergenic 55.0%
GTCACATCGATCAGGTGGCT+CGG - chr5_3:438767-438786 None:intergenic 55.0%
!! CTGGTGTCACATCGATCAGG+TGG - chr5_3:438772-438791 None:intergenic 55.0%
! CACCAGAGAAAACGGTGCTG+TGG + chr5_3:438786-438805 Msa0789810:CDS 55.0%
CCCACCCTGTAAAAAGGGGA+AGG - chr5_3:437671-437690 None:intergenic 55.0%
GAGGGTGAGAATCTTGCTCC+TGG + chr5_3:438232-438251 Msa0789810:CDS 55.0%
!! TGTGGTTTTGCAAGGGCTGC+TGG - chr5_3:438397-438416 None:intergenic 55.0%
GTTACGCTTGCAGCCACCAT+AGG - chr5_3:438467-438486 None:intergenic 55.0%
TGGTGGCTGCAAGCGTAACA+AGG + chr5_3:438468-438487 Msa0789810:CDS 55.0%
! CCGGTGTATGGCCTTGGAAA+AGG - chr5_3:438714-438733 None:intergenic 55.0%
GAATAGCCGGTGTATGGCCT+TGG - chr5_3:438720-438739 None:intergenic 55.0%
CCGAAGGAATAGCCGGTGTA+TGG - chr5_3:438726-438745 None:intergenic 55.0%
GTCACATCGATCAGGTGGCT+CGG - chr5_3:438767-438786 None:intergenic 55.0%
!! CTGGTGTCACATCGATCAGG+TGG - chr5_3:438772-438791 None:intergenic 55.0%
! CACCAGAGAAAACGGTGCTG+TGG + chr5_3:438786-438805 Msa0789810:CDS 55.0%
! CTGGGCTAGGTCCTCTTCCT+TGG + chr5_3:437604-437623 Msa0789810:CDS 60.0%
CGAATGCACATGCGAGGCCA+TGG + chr5_3:438355-438374 Msa0789810:CDS 60.0%
! GTGGCTCGGCAGATCCTTTG+TGG - chr5_3:438753-438772 None:intergenic 60.0%
! CTGGGCTAGGTCCTCTTCCT+TGG + chr5_3:437604-437623 Msa0789810:CDS 60.0%
CGAATGCACATGCGAGGCCA+TGG + chr5_3:438355-438374 Msa0789810:CDS 60.0%
! GTGGCTCGGCAGATCCTTTG+TGG - chr5_3:438753-438772 None:intergenic 60.0%
TCCTCTTCCTTGGCCCCCAC+TGG + chr5_3:437614-437633 Msa0789810:CDS 65.0%
CCTCTTCCTTGGCCCCCACT+GGG + chr5_3:437615-437634 Msa0789810:CDS 65.0%
TCCTTGGCCCCCACTGGGAA+TGG + chr5_3:437620-437639 Msa0789810:CDS 65.0%
CCTTGGCCCCCACTGGGAAT+GGG + chr5_3:437621-437640 Msa0789810:CDS 65.0%
TCCTCTTCCTTGGCCCCCAC+TGG + chr5_3:437614-437633 Msa0789810:CDS 65.0%
CCTCTTCCTTGGCCCCCACT+GGG + chr5_3:437615-437634 Msa0789810:CDS 65.0%
TCCTTGGCCCCCACTGGGAA+TGG + chr5_3:437620-437639 Msa0789810:CDS 65.0%
CCTTGGCCCCCACTGGGAAT+GGG + chr5_3:437621-437640 Msa0789810:CDS 65.0%
CCCAGTGGGGGCCAAGGAAG+AGG - chr5_3:437618-437637 None:intergenic 70.0%
CCCATTCCCAGTGGGGGCCA+AGG - chr5_3:437624-437643 None:intergenic 70.0%
CCCAGTGGGGGCCAAGGAAG+AGG - chr5_3:437618-437637 None:intergenic 70.0%
CCCATTCCCAGTGGGGGCCA+AGG - chr5_3:437624-437643 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 437572 439068 437572 ID=Msa0789810;Name=Msa0789810
chr5_3 mRNA 437572 439068 437572 ID=Msa0789810-mRNA-1;Parent=Msa0789810;Name=Msa0789810-mRNA-1;_AED=0.13;_eAED=0.75;_QI=0|-1|0|1|-1|1|1|0|498
chr5_3 exon 437572 439068 437572 ID=Msa0789810-mRNA-1:exon:99;Parent=Msa0789810-mRNA-1
chr5_3 CDS 437572 439068 437572 ID=Msa0789810-mRNA-1:cds;Parent=Msa0789810-mRNA-1
Gene Sequence

>Msa0789810

ATGAATCCAACTGGAAGCTTGTGTGCTAACAACTGGGCTAGGTCCTCTTCCTTGGCCCCCACTGGGAATGGGTTACAAACGAATTTGTCCTCGTGTCCTTCCCCTTTTTACAGGGTGGGAATTGAAACACCTTTCAAAGAAATCAACCAACCATCTCGAACTCAGTCTGTGATTCCGGATGATATTAAGATCACTGATCAGGAAACGAGTAAACTTCAAGACTGGGATTCCAGTGTTATGTTGAATAAGCTTTCATTTTTGGAAGAAAAGATTCATCAGCTCCAGGATCTTGTGCATTTGATTGATACTAAGAAGTGTCAACCTTTTGAACAACCGCGTGAACTTGTGACTCAAGAACAACAACTCATCACAGCTGATTTAACATCAATTATTGTTCAGTTGATCTCTACTGCAGGGAGTCTTCTCCCTTCTGTTAGGAACTCCGGTACAAACACAAGTCCGTTGCTTGGACAGCTTAGCCAACTTAACGGGATTAGCCTTCCTTTTGGAACAGGCACAAGTTGTGGTATTCAGCCACAAAATAACAGTGCAACTACATTTTTCGATCAGTCCATTCATAAGGATGTACCTAATAATTGTGAAATGGTGCAAAACAATACTGTGGAAGAACATGAACATAAAGACGAAGAAGATATGGAAGAGGGTGAGAATCTTGCTCCTGGTTCATATGAGATTTTACAACTAGAAAAAGAAGAAATCCTTGCACCTCACACACATTTCTGTACAATCTGTGGCAAGGGTTTCAAGAGGGATGCAAATCTTCGAATGCACATGCGAGGCCATGGTGATGAGTACAAAACTCCAGCAGCCCTTGCAAAACCACACAAAGAAACTGGGTCCGAACCGAAGCTTATCAAGAGGTATTCGTGTCCCTATGGTGGCTGCAAGCGTAACAAGGATCACAAGAAATTTCAGCCTCTGAAGACTATTTTATGTGTCAAAAACCACTACAAAAGAACACACTGTGATAAGAGTTACACTTGCAGCAGATGCCACACGAAGAAGTTTTCAGTCATGGCAGATCTGAAAACTCATGAGAAACACTGTGGCAAGGATAAATGGCTTTGTTCATGTGGCACAACATTTTCAAGGAAAGACAAGCTTTTCGGACACATTGCCCTTTTCCAAGGCCATACACCGGCTATTCCTTCGGAAGACCACAAAGGATCTGCCGAGCCACCTGATCGATGTGACACCAGAGAAAACGGTGCTGTGGTAGGAAGCATGAACTTCTGTTTTGGATCAAATCCTTCAAGTGAAAATGGATCTGATAGCATTATGGATGTGAAAGGTAATATTGATGATCCTATCAATTATTTCTCACCTTTGAACTTTGAAGGCTGTAACTTTGGTGGGTTTAATGAATTCCCTCAACCTCCATTTGAAGATTCAGAAGGCTCTTTCTCTTTTCTCATGTCGGGTTCGTTTAATTATGCTCCTAAATCTGGTGGTGAATCATGTTCTGACAATCTGTAA
Protein sequence

>Msa0789810

MNPTGSLCANNWARSSSLAPTGNGLQTNLSSCPSPFYRVGIETPFKEINQPSRTQSVIPDDIKITDQETSKLQDWDSSVMLNKLSFLEEKIHQLQDLVHLIDTKKCQPFEQPRELVTQEQQLITADLTSIIVQLISTAGSLLPSVRNSGTNTSPLLGQLSQLNGISLPFGTGTSCGIQPQNNSATTFFDQSIHKDVPNNCEMVQNNTVEEHEHKDEEDMEEGENLAPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKETGSEPKLIKRYSCPYGGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPSEDHKGSAEPPDRCDTRENGAVVGSMNFCFGSNPSSENGSDSIMDVKGNIDDPINYFSPLNFEGCNFGGFNEFPQPPFEDSEGSFSFLMSGSFNYAPKSGGESCSDNL*