AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0795410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795410 MtrunA17_Chr7g0274481 95.034 725 30 1 4 728 8 726 0.0 1335
Msa0795410 MtrunA17_Chr5g0397691 93.669 616 26 3 1 612 1 607 0.0 1082
Msa0795410 MtrunA17_Chr5g0397681 91.837 49 4 0 631 679 1 49 4.21e-25 98.6
Msa0795410 MtrunA17_Chr7g0238631 36.364 110 64 2 4 112 62 166 6.17e-13 72.0
Msa0795410 MtrunA17_Chr3g0139671 38.462 78 48 0 4 81 86 163 1.56e-11 68.2
Msa0795410 MtrunA17_Chr8g0362231 32.353 102 64 1 3 104 22 118 3.03e-11 66.2
Msa0795410 MtrunA17_Chr6g0460661 40.789 76 45 0 6 81 19 94 3.57e-11 62.4
Msa0795410 MtrunA17_Chr1g0157731 32.727 110 68 2 4 112 40 144 6.79e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0795410 AT1G09770.1 76.204 727 162 4 4 727 8 726 0.0 1069
Msa0795410 AT3G18100.1 35.294 102 59 2 4 104 547 642 1.98e-13 74.7
Msa0795410 AT3G18100.1 34.653 101 61 2 6 106 498 593 3.15e-11 67.4
Msa0795410 AT3G18100.3 35.294 102 59 2 4 104 499 594 3.18e-13 73.9
Msa0795410 AT3G18100.3 34.653 101 61 2 6 106 450 545 6.02e-11 66.6
Msa0795410 AT3G18100.4 35.294 102 59 2 4 104 386 481 4.15e-13 73.2
Msa0795410 AT3G18100.4 34.653 101 61 2 6 106 337 432 8.36e-11 65.9
Msa0795410 AT5G02320.3 34.862 109 67 1 4 112 16 120 4.95e-13 72.8
Msa0795410 AT5G02320.1 34.862 109 67 1 4 112 76 180 4.96e-13 72.8
Msa0795410 AT5G02320.2 34.862 109 67 1 4 112 76 180 4.96e-13 72.8
Msa0795410 AT3G18100.2 35.294 102 59 2 4 104 334 429 5.55e-13 72.8
Msa0795410 AT5G11510.3 35.455 110 65 2 4 112 30 134 4.60e-12 70.1
Msa0795410 AT5G11510.1 35.455 110 65 2 4 112 30 134 4.60e-12 70.1
Msa0795410 AT5G11510.4 35.455 110 65 2 4 112 30 134 4.60e-12 70.1
Msa0795410 AT5G11510.2 35.455 110 65 2 4 112 30 134 9.60e-12 68.9
Msa0795410 AT5G11510.5 35.455 110 65 2 4 112 30 134 1.13e-11 68.9
Msa0795410 AT4G18770.1 38.889 90 50 1 4 93 218 302 1.58e-11 67.4
Msa0795410 AT3G09370.2 34.545 110 66 2 4 112 84 188 1.91e-11 67.8
Msa0795410 AT3G09370.1 34.545 110 66 2 4 112 79 183 1.94e-11 67.8
Msa0795410 AT4G33450.1 38.462 78 48 0 4 81 20 97 2.09e-11 65.5
Msa0795410 AT3G09370.3 34.545 110 66 2 4 112 92 196 2.54e-11 67.4
Msa0795410 AT5G40360.1 37.179 78 49 0 4 81 159 236 9.31e-11 64.7
Msa0795410 AT5G17800.1 40.000 80 48 0 2 81 92 171 9.79e-11 64.3

Find 238 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTCTTTCTAACTGTTTC+TGG 0.008572 5_3:-7357525 None:intergenic
CTGTTGCAATTGTTGATTTA+TGG 0.112818 5_3:+7359697 Msa0795410:three_prime_UTR
TTCTGGGTCATTCAGCTTCT+TGG 0.153986 5_3:-7357508 None:intergenic
TTTCTTTCAATTATTGTTAA+TGG 0.166886 5_3:+7359557 Msa0795410:three_prime_UTR
TGCCGGCGCCATACCACTTC+TGG 0.177175 5_3:-7357940 None:intergenic
CCAAACACCTATGCTCATTT+TGG 0.182921 5_3:-7356659 None:intergenic
ATTTCATAACAGCAGCTTTC+AGG 0.225007 5_3:-7356702 None:intergenic
CAGCATCTCTGGAGCTTATT+AGG 0.228626 5_3:+7358309 Msa0795410:CDS
GGAGTAAGGCCTGCACTTCC+AGG 0.240853 5_3:-7357918 None:intergenic
TTGGGTGTCTGTGGATAATT+AGG 0.241982 5_3:-7357678 None:intergenic
CATGATGGAAGCTGAAAATT+TGG 0.248037 5_3:+7357761 Msa0795410:CDS
GTTCTCTGAGGAGTTCTTAA+AGG 0.283026 5_3:-7357714 None:intergenic
AAAGCTGCTGTTATGAAATA+TGG 0.287568 5_3:+7356706 Msa0795410:CDS
GAATTGGTTGCATCACTATC+TGG 0.302904 5_3:-7358139 None:intergenic
GGTCGTGCAGGCTTCGATTC+AGG 0.305523 5_3:-7357060 None:intergenic
AAAGGAGCTTCTAGCCTTAC+TGG 0.309592 5_3:+7358412 Msa0795410:CDS
AGTCCACTCAGTCTTCTTAA+TGG 0.314486 5_3:-7356818 None:intergenic
CCCTGTCATAGAAGATTATC+AGG 0.315605 5_3:+7358523 Msa0795410:CDS
ATGGATCTCAACTAATTAGT+AGG 0.316459 5_3:+7359716 Msa0795410:three_prime_UTR
CCATTGCCTCACGAAGATAC+TGG 0.317289 5_3:-7359248 None:intergenic
TGGGGTCACTCCTAAGAAAA+AGG 0.319124 5_3:+7357854 Msa0795410:CDS
TCTTCAGCATCTTCTTGAAT+TGG 0.331097 5_3:-7358155 None:intergenic
GTTTGAGAAGAGGCCTCCTC+TGG 0.334561 5_3:+7357311 Msa0795410:CDS
ATCTCTTTCTAACTGTTTCT+GGG 0.335857 5_3:-7357524 None:intergenic
ACCGTGAAACCAAACCAAAA+AGG 0.338245 5_3:+7356027 None:intergenic
ATCTCGTCGGCTTGCTCAAT+AGG 0.342238 5_3:-7358383 None:intergenic
TCAAGTTCTTCTATAGTAGT+AGG 0.344179 5_3:-7357384 None:intergenic
CTCCGAAGGGAACTCCTCTC+AGG 0.358383 5_3:+7357988 Msa0795410:CDS
TAGGCCTCCTCCAGCATCTC+TGG 0.367513 5_3:+7358298 Msa0795410:CDS
TTTGTAGTTGTCTAGTTCCT+TGG 0.368196 5_3:+7359585 Msa0795410:three_prime_UTR
GCGTGAGGAGATAGCAAATA+AGG 0.368961 5_3:+7358457 Msa0795410:CDS
CCAAAATGAGCATAGGTGTT+TGG 0.385146 5_3:+7356659 Msa0795410:exon
GCAGGCTTCGATTCAGGATT+CGG 0.385997 5_3:-7357054 None:intergenic
TCTCGTCGGCTTGCTCAATA+GGG 0.387795 5_3:-7358382 None:intergenic
AGGCCCATTTGCTGCTCGTT+TGG 0.388358 5_3:-7358495 None:intergenic
TCAGATTTCCGATCAAGAAT+TGG 0.389053 5_3:+7357569 Msa0795410:CDS
CCTTGACGCCGCTTGTGTTA+AGG 0.393639 5_3:+7356975 Msa0795410:CDS
TATTACAAAACCAACTTTGA+AGG 0.393656 5_3:-7359648 None:intergenic
TCTCACGAAACGGGTTGAAC+CGG 0.399309 5_3:-7356616 None:intergenic
GGAATTGCATTTCATTATTG+TGG 0.401293 5_3:+7359762 Msa0795410:three_prime_UTR
AGGCTGCTGGGATTGATATA+AGG 0.409355 5_3:+7357241 Msa0795410:CDS
TCTGCAACCCCTGGAAGTGC+AGG 0.411721 5_3:+7357909 Msa0795410:CDS
AGAGATGCTGGAGGAGGCCT+AGG 0.415805 5_3:-7358296 None:intergenic
TATGGTCTATCAAGTGTTGC+TGG 0.416170 5_3:+7359357 Msa0795410:CDS
GCCGGCGCCATACCACTTCT+GGG 0.416494 5_3:-7357939 None:intergenic
GGATCCAAACGAGCAGCAAA+TGG 0.417377 5_3:+7358491 Msa0795410:CDS
AAAGGAGTCATGGCTTGGTT+GGG 0.420072 5_3:-7357696 None:intergenic
GCTACATATCAATGAAGATA+TGG 0.420115 5_3:+7358016 Msa0795410:CDS
ACCCACAATGGTAGCACTAA+TGG 0.421586 5_3:-7356914 None:intergenic
TAAGGCAGCGGAGGAGGAAA+AGG 0.424744 5_3:+7357259 Msa0795410:CDS
TTGGATGAAATTGCCAAGTT+GGG 0.429250 5_3:+7357588 Msa0795410:CDS
ACGACCCGATCCTGTTGATA+TGG 0.431516 5_3:+7357077 Msa0795410:CDS
AGCTTTCAGGATTTCATCCT+CGG 0.436489 5_3:-7356689 None:intergenic
CAGTATCTTCGTGAGGCAAT+GGG 0.437430 5_3:+7359249 Msa0795410:CDS
TTTGATACCCGCAACACATA+TGG 0.438271 5_3:+7359339 Msa0795410:CDS
TTGTATTCCTCTCACGAAAC+GGG 0.439246 5_3:-7356625 None:intergenic
TGATAGACCATATGTGTTGC+GGG 0.443197 5_3:-7359346 None:intergenic
ATTGGATGAAATTGCCAAGT+TGG 0.444138 5_3:+7357587 Msa0795410:CDS
AAGAACTTGAGGGGAAAAGA+AGG 0.444403 5_3:+7357397 Msa0795410:CDS
GCAAATAAGGAGAGAGAGAA+AGG 0.446065 5_3:+7358470 Msa0795410:CDS
ACTAATGGTTCTCCAACTAA+TGG 0.446782 5_3:-7356899 None:intergenic
CTAATAAGCTCCAGAGATGC+TGG 0.447893 5_3:-7358308 None:intergenic
CCATACCACTTCTGGGAGTA+AGG 0.448683 5_3:-7357932 None:intergenic
ATCCTCTTCAATCTTCTCCT+CGG 0.449369 5_3:-7358180 None:intergenic
GAGGGAGTCAGCAGTGGGAT+TGG 0.449422 5_3:-7357888 None:intergenic
AAGAGAGAATTGAAGGCTGC+TGG 0.451049 5_3:+7357228 Msa0795410:CDS
TCCTGATAATCTTCTATGAC+AGG 0.451422 5_3:-7358524 None:intergenic
TCATACTCATCCATATCAAC+AGG 0.454291 5_3:-7357087 None:intergenic
TCCCCTGGACGCAATTTCCT+AGG 0.458724 5_3:-7357024 None:intergenic
AGAGATTAATACCTGCGGTT+TGG 0.465069 5_3:-7356128 None:intergenic
TTTGTATTCCTCTCACGAAA+CGG 0.468892 5_3:-7356626 None:intergenic
CAGAAATTCCGTTTGAGAAG+AGG 0.469889 5_3:+7357301 Msa0795410:CDS
TGCAGAGAGGCAAGATGCCC+CGG 0.470266 5_3:+7357470 Msa0795410:CDS
TAAAGGAGTCATGGCTTGGT+TGG 0.470630 5_3:-7357697 None:intergenic
GAATTGCATTTCATTATTGT+GGG 0.471151 5_3:+7359763 Msa0795410:three_prime_UTR
GAGTCTCAGACACCACTGTT+AGG 0.471291 5_3:+7357795 Msa0795410:CDS
CTGAAAATTTGGCCAGGCTG+AGG 0.471566 5_3:+7357772 Msa0795410:CDS
TTCTTAAAGGAGTCATGGCT+TGG 0.472192 5_3:-7357701 None:intergenic
GTCTAAATGCCCTTCAAAGT+TGG 0.473158 5_3:+7359638 Msa0795410:three_prime_UTR
TGGCATGCAGAATAGCAGCC+GGG 0.473211 5_3:-7357488 None:intergenic
TTGATATAAGGCAGCGGAGG+AGG 0.474103 5_3:+7357253 Msa0795410:CDS
TGATGTTGCTGATGAGGATA+GGG 0.479449 5_3:+7357341 Msa0795410:CDS
AATTTCATCCAATTCTTGAT+CGG 0.479560 5_3:-7357577 None:intergenic
AGAGCGCGAGATAGATAGCT+AGG 0.482478 5_3:-7356071 None:intergenic
AATCTGAAGGATGCAACTCC+GGG 0.484835 5_3:-7357827 None:intergenic
CCAGTATCTTCGTGAGGCAA+TGG 0.484875 5_3:+7359248 Msa0795410:CDS
TGTCTGAGACTCCCTCAGCC+TGG 0.484905 5_3:-7357784 None:intergenic
AACGATCAAAAGTCATTCAA+AGG 0.485643 5_3:+7358267 Msa0795410:CDS
ATTACAAAACCAACTTTGAA+GGG 0.488031 5_3:-7359647 None:intergenic
TCCTCTTCAATCTTCTCCTC+GGG 0.488427 5_3:-7358179 None:intergenic
ACCATTAGTGCTACCATTGT+GGG 0.490042 5_3:+7356913 Msa0795410:CDS
GAGTAAGGCCTGCACTTCCA+GGG 0.490905 5_3:-7357917 None:intergenic
AGAAGAAGAGGCACGGCAGA+AGG 0.493242 5_3:+7358232 Msa0795410:CDS
CTCCTTTCTTATCATCTCGT+CGG 0.493278 5_3:-7358396 None:intergenic
TCATTCAAAGGGAACTTCCT+AGG 0.493709 5_3:+7358279 Msa0795410:CDS
TGCACTTCCAGGGGTTGCAG+AGG 0.493979 5_3:-7357907 None:intergenic
AAATCTGAAGGATGCAACTC+CGG 0.494050 5_3:-7357828 None:intergenic
CTGACTCCCTCTGCAACCCC+TGG 0.496434 5_3:+7357900 Msa0795410:CDS
TCTTCTATGACAGGGATAGC+AGG 0.496725 5_3:-7358515 None:intergenic
CTCAGTGGAGAACCATTAGT+TGG 0.497414 5_3:+7356887 Msa0795410:CDS
GTCTCCGTCAGCTCTTATCA+AGG 0.499862 5_3:-7358336 None:intergenic
GAAGTGGTATGGCGCCGGCA+AGG 0.499877 5_3:+7357943 Msa0795410:CDS
TTCAGAAGCATGTGCTCGGT+TGG 0.501151 5_3:+7357122 Msa0795410:CDS
AGGAGATCATGTAGATCTGT+TGG 0.501729 5_3:+7359741 Msa0795410:three_prime_UTR
GTGAGAAGTAAGCTGGATGA+TGG 0.502979 5_3:+7359423 Msa0795410:CDS
CTCATCCATATCAACAGGAT+CGG 0.503902 5_3:-7357082 None:intergenic
ATCGCTGCCCACAAGGTCAA+TGG 0.504621 5_3:-7357616 None:intergenic
AAGTAAGCTGGATGATGGGA+AGG 0.506469 5_3:+7359428 Msa0795410:CDS
ATAGCATCTCCTTTACTAGC+TGG 0.506651 5_3:-7357738 None:intergenic
AGAGGATATGTCTGATAGAA+TGG 0.507303 5_3:+7358196 Msa0795410:CDS
AGCTCCAGAGATGCTGGAGG+AGG 0.508047 5_3:-7358302 None:intergenic
GGTTCAACCCGTTTCGTGAG+AGG 0.508197 5_3:+7356618 Msa0795410:five_prime_UTR
TGCAGATTTGCAAACGAGTA+GGG 0.508803 5_3:-7356755 None:intergenic
TCCCTGAGAGGAGTTCCCTT+CGG 0.510495 5_3:-7357990 None:intergenic
GATGATTCGACTTGAGAAGA+AGG 0.511403 5_3:+7359455 Msa0795410:CDS
TGATAGAATGGCTAGAGAAA+AGG 0.511992 5_3:+7358208 Msa0795410:CDS
TTGGCATGCAGAATAGCAGC+CGG 0.514383 5_3:-7357489 None:intergenic
CAGAGAACACCAGCTAGTAA+AGG 0.515217 5_3:+7357729 Msa0795410:CDS
ACGAGTAGCACTGCTACCTT+CGG 0.515674 5_3:-7357646 None:intergenic
GTTGCAGAGGGAGTCAGCAG+TGG 0.516056 5_3:-7357894 None:intergenic
AAGTGGTATGGCGCCGGCAA+GGG 0.516862 5_3:+7357944 Msa0795410:CDS
TGCTTTCAGAAGCATGTGCT+CGG 0.518933 5_3:+7357118 Msa0795410:CDS
GGTTATGCCATTGACCTTGT+GGG 0.519574 5_3:+7357609 Msa0795410:CDS
CATTGCCTCACGAAGATACT+GGG 0.519621 5_3:-7359247 None:intergenic
TGGGTGTCTGTGGATAATTA+GGG 0.519886 5_3:-7357677 None:intergenic
TCAACAGGATCGGGTCGTGC+AGG 0.520300 5_3:-7357072 None:intergenic
TTGATGTTGCTGATGAGGAT+AGG 0.524642 5_3:+7357340 Msa0795410:CDS
TCGGCTTGCTCAATAGGGGT+TGG 0.524733 5_3:-7358377 None:intergenic
TGAAAATTTGGCCAGGCTGA+GGG 0.525084 5_3:+7357773 Msa0795410:CDS
GACCCTAGGAAATTGCGTCC+AGG 0.525314 5_3:+7357021 Msa0795410:CDS
AGGGTTCTGATAACAGAGTA+AGG 0.525530 5_3:-7356051 None:intergenic
TGGATCTCAACTAATTAGTA+GGG 0.526169 5_3:+7359717 Msa0795410:three_prime_UTR
CAAGTTCTTCTATAGTAGTA+GGG 0.528361 5_3:-7357383 None:intergenic
AGAGGAGGCCTCTTCTCAAA+CGG 0.529206 5_3:-7357309 None:intergenic
TGAGAATGTGAGAAGTAAGC+TGG 0.529343 5_3:+7359416 Msa0795410:CDS
GCTTGCTCAATAGGGGTTGG+TGG 0.531592 5_3:-7358374 None:intergenic
CACTCAGTCTTCTTAATGGA+AGG 0.532258 5_3:-7356814 None:intergenic
GCACTTCCAGGGGTTGCAGA+GGG 0.532965 5_3:-7357906 None:intergenic
TCATCCATATCAACAGGATC+GGG 0.534614 5_3:-7357081 None:intergenic
AGCATTGTCATGCTCCAGTA+AGG 0.535038 5_3:-7358426 None:intergenic
ACCCTAGGAAATTGCGTCCA+GGG 0.536757 5_3:+7357022 Msa0795410:CDS
GATCCAAACGAGCAGCAAAT+GGG 0.542547 5_3:+7358492 Msa0795410:CDS
TTGCAGATTTGCAAACGAGT+AGG 0.543492 5_3:-7356756 None:intergenic
AAGGACGATAACTATGATCC+TGG 0.549150 5_3:+7356994 Msa0795410:CDS
AGAGAGAATTGAAGGCTGCT+GGG 0.549517 5_3:+7357229 Msa0795410:CDS
GGGTTATGCCATTGACCTTG+TGG 0.550781 5_3:+7357608 Msa0795410:CDS
TGATCGGAAATCTGAGGTGG+TGG 0.551298 5_3:-7357561 None:intergenic
CCTTACTCCCAGAAGTGGTA+TGG 0.551739 5_3:+7357932 Msa0795410:CDS
AGCCGACGAGATGATAAGAA+AGG 0.552168 5_3:+7358394 Msa0795410:CDS
GAAAAGAAGGATTGATGTTG+AGG 0.552508 5_3:+7357410 Msa0795410:CDS
GGTATGGCGCCGGCAAGGGA+TGG 0.553823 5_3:+7357948 Msa0795410:CDS
AGGAGTTCTTAAAGGAGTCA+TGG 0.554344 5_3:-7357706 None:intergenic
TCCCAGAAGTGGTATGGCGC+CGG 0.554437 5_3:+7357938 Msa0795410:CDS
AACCATTAGTGCTACCATTG+TGG 0.555517 5_3:+7356912 Msa0795410:CDS
TGAGAAAGCAAGACGTTGCA+AGG 0.556741 5_3:+7357439 Msa0795410:CDS
GTCAATGGCATAACCCAACT+TGG 0.557603 5_3:-7357601 None:intergenic
ATGATCCTGGTGATGACCCT+AGG 0.560117 5_3:+7357007 Msa0795410:CDS
TAGAATCTCAGTAGCATCCA+AGG 0.561521 5_3:-7359602 None:intergenic
GGATTCGGATCAATCTCCCC+TGG 0.561665 5_3:-7357039 None:intergenic
CCCCTGGACGCAATTTCCTA+GGG 0.562986 5_3:-7357023 None:intergenic
ACGATCAAAAGTCATTCAAA+GGG 0.567785 5_3:+7358268 Msa0795410:CDS
CAAAACAGTGTAAAGCTCGT+TGG 0.569337 5_3:+7356776 Msa0795410:CDS
ACTACTATAGAAGAACTTGA+GGG 0.571318 5_3:+7357387 Msa0795410:CDS
TTGCAGAGGGAGTCAGCAGT+GGG 0.571318 5_3:-7357893 None:intergenic
TAAAGGAGATGCTATCATGA+TGG 0.573963 5_3:+7357746 Msa0795410:CDS
TCTCAACTAATTAGTAGGGT+AGG 0.578245 5_3:+7359721 Msa0795410:three_prime_UTR
TTACTAGCTGGTGTTCTCTG+AGG 0.578802 5_3:-7357726 None:intergenic
TAGAGAAAAGGCAGAAGAAG+AGG 0.579560 5_3:+7358220 Msa0795410:CDS
CCTTAACACAAGCGGCGTCA+AGG 0.579579 5_3:-7356975 None:intergenic
TTGATAGACCATATGTGTTG+CGG 0.580931 5_3:-7359347 None:intergenic
TCCGAAGGGAACTCCTCTCA+GGG 0.580985 5_3:+7357989 Msa0795410:CDS
ATGGCTTGGTTGGGTGTCTG+TGG 0.585691 5_3:-7357687 None:intergenic
AAGGTTACATTACTCACGCA+AGG 0.586053 5_3:+7359474 Msa0795410:CDS
AGTAAGGCCTGCACTTCCAG+GGG 0.586407 5_3:-7357916 None:intergenic
AACTCCTTGATAAGAGCTGA+CGG 0.589304 5_3:+7358332 Msa0795410:CDS
CCTGATAATCTTCTATGACA+GGG 0.589597 5_3:-7358523 None:intergenic
GTAAAGCTCGTTGGTATGAG+TGG 0.590546 5_3:+7356785 Msa0795410:CDS
GACTGAGTGGACTCGAGAAG+AGG 0.592125 5_3:+7356828 Msa0795410:CDS
TGCTTCAACAAAATCCTCGA+GGG 0.592155 5_3:-7359286 None:intergenic
CTCCTTCGCAGTGTCTTGAA+CGG 0.594673 5_3:+7356941 Msa0795410:CDS
TGCTGATGAGGATAGGGAGG+TGG 0.595277 5_3:+7357347 Msa0795410:CDS
AGTGTTGCCAAAATGAGCAT+AGG 0.596521 5_3:+7356652 Msa0795410:exon
TGAGAAGTAAGCTGGATGAT+GGG 0.598085 5_3:+7359424 Msa0795410:CDS
TACTACTATAGAAGAACTTG+AGG 0.598439 5_3:+7357386 Msa0795410:CDS
AAAAGGCAGAAGAAGAGGCA+CGG 0.599691 5_3:+7358225 Msa0795410:CDS
TTTGAGAAGAGGCCTCCTCT+GGG 0.600719 5_3:+7357312 Msa0795410:CDS
GAGCGCGAGATAGATAGCTA+GGG 0.602339 5_3:-7356070 None:intergenic
CTAATGGTTCTCCACTGAGT+AGG 0.603402 5_3:-7356883 None:intergenic
TGGAAGCTGAAAATTTGGCC+AGG 0.607474 5_3:+7357766 Msa0795410:CDS
GCTCGGTTGGCTAACACGAA+AGG 0.608258 5_3:+7357135 Msa0795410:CDS
CGTCGTCTTCACCAAACCGC+AGG 0.608509 5_3:+7356117 Msa0795410:five_prime_UTR
TCTCAGACACCACTGTTAGG+AGG 0.609284 5_3:+7357798 Msa0795410:CDS
AGCGGAGGAGGAAAAGGAGA+GGG 0.609580 5_3:+7357265 Msa0795410:CDS
AGAAACAGCTTGAGGAAGCG+AGG 0.613924 5_3:+7357184 Msa0795410:CDS
CAGCGGAGGAGGAAAAGGAG+AGG 0.619802 5_3:+7357264 Msa0795410:CDS
CTGGGATTGATATAAGGCAG+CGG 0.621106 5_3:+7357247 Msa0795410:CDS
ACTGTTAGGAGGAGAGAACC+CGG 0.623267 5_3:+7357809 Msa0795410:CDS
GCAGGCCTTACTCCCAGAAG+TGG 0.624004 5_3:+7357927 Msa0795410:CDS
CGAAGGAGTACGACCCACAA+TGG 0.624367 5_3:-7356926 None:intergenic
CCCTAGGAAATTGCGTCCAG+GGG 0.631019 5_3:+7357023 Msa0795410:CDS
CTCGTCGGCTTGCTCAATAG+GGG 0.633774 5_3:-7358381 None:intergenic
AACAGCTTGAGGAAGCGAGG+AGG 0.635219 5_3:+7357187 Msa0795410:CDS
GGCATGCAGAATAGCAGCCG+GGG 0.639810 5_3:-7357487 None:intergenic
AATTTCCTAGGGTCATCACC+AGG 0.641833 5_3:-7357012 None:intergenic
TGTTGCTGATGAGGATAGGG+AGG 0.645550 5_3:+7357344 Msa0795410:CDS
AGAAGATGCTGAAGAGCCCG+AGG 0.646686 5_3:+7358163 Msa0795410:CDS
TGGTGAAGACGACGATGCGG+CGG 0.648650 5_3:-7356108 None:intergenic
CTACTATAGAAGAACTTGAG+GGG 0.654103 5_3:+7357388 Msa0795410:CDS
GCCCGAGGAGAAGATTGAAG+AGG 0.654306 5_3:+7358178 Msa0795410:CDS
ATAGTGCTAGACTCGAGCTA+CGG 0.656913 5_3:+7358048 Msa0795410:CDS
TGAGTTCATCGCTGCCCACA+AGG 0.658141 5_3:-7357623 None:intergenic
AACAATAATTGAAAGAAACA+CGG 0.658402 5_3:-7359552 None:intergenic
GTTATCGTCCTTAACACAAG+CGG 0.659717 5_3:-7356983 None:intergenic
AATTCTTGATCGGAAATCTG+AGG 0.665249 5_3:-7357567 None:intergenic
AGCTAGGGAGAAACAGCTTG+AGG 0.665565 5_3:+7357176 Msa0795410:CDS
TACCGTTCAAGACACTGCGA+AGG 0.666095 5_3:-7356943 None:intergenic
GGCAGCGATGAACTCACCGA+AGG 0.666391 5_3:+7357630 Msa0795410:CDS
AGGTTACATTACTCACGCAA+GGG 0.667391 5_3:+7359475 Msa0795410:CDS
CTAAGCTTACGCCTACTCAG+TGG 0.671805 5_3:+7356872 Msa0795410:CDS
ACATCAAAATAACCCAGAGG+AGG 0.672004 5_3:-7357324 None:intergenic
TCTTGATCGGAAATCTGAGG+TGG 0.678038 5_3:-7357564 None:intergenic
GGGTTCTCTCCTCCTAACAG+TGG 0.680208 5_3:-7357807 None:intergenic
CAATGCTAAGTATCCGCGTG+AGG 0.680301 5_3:+7358442 Msa0795410:CDS
CTTCCATTAAGAAGACTGAG+TGG 0.680364 5_3:+7356815 Msa0795410:CDS
TTATTTGCTATCTCCTCACG+CGG 0.684948 5_3:-7358455 None:intergenic
TGAAGCCCAGTATCTTCGTG+AGG 0.688109 5_3:+7359242 Msa0795410:CDS
GTGCTTCAACAAAATCCTCG+AGG 0.688213 5_3:-7359287 None:intergenic
ATATGTAGCTCATCCCTGAG+AGG 0.688581 5_3:-7358002 None:intergenic
GTTTGGTGAAGACGACGATG+CGG 0.691661 5_3:-7356111 None:intergenic
AGTATCTTCGTGAGGCAATG+GGG 0.691770 5_3:+7359250 Msa0795410:CDS
GGATTGATATAAGGCAGCGG+AGG 0.699913 5_3:+7357250 Msa0795410:CDS
ATAAGCTCCAGAGATGCTGG+AGG 0.701115 5_3:-7358305 None:intergenic
TGATATGGATGAGTATGAGA+AGG 0.714958 5_3:+7357092 Msa0795410:CDS
TGTCATAGAAGATTATCAGG+AGG 0.727087 5_3:+7358526 Msa0795410:CDS
GCATGAAAATGATTCCCTCG+AGG 0.731393 5_3:+7359272 Msa0795410:CDS
TAAACGAGTCTCCTGCACTG+TGG 0.742646 5_3:+7356588 Msa0795410:five_prime_UTR
CAAGGAATAAAATTGCAGAG+AGG 0.745082 5_3:+7357457 Msa0795410:CDS
GCAACATCAAAATAACCCAG+AGG 0.761769 5_3:-7357327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATCATTTGATTAATT+AGG + chr5_3:7358943-7358962 Msa0795410:intron 10.0%
!! AAAAAAAAAGAATAGTATAG+CGG - chr5_3:7356372-7356391 None:intergenic 15.0%
!! AGGCATAAAAATAAAATTAA+AGG - chr5_3:7358593-7358612 None:intergenic 15.0%
!! ATTATAACTGAAAAAAAACA+AGG - chr5_3:7358930-7358949 None:intergenic 15.0%
!! TTTCTTTCAATTATTGTTAA+TGG + chr5_3:7359557-7359576 Msa0795410:three_prime_UTR 15.0%
!!! ACAAAGTACTAATAATTTCA+AGG - chr5_3:7358726-7358745 None:intergenic 20.0%
!! AAGTTTGTATTACTATCATT+CGG - chr5_3:7359081-7359100 None:intergenic 20.0%
!! ATAATAATTAACAAGCAGTT+TGG - chr5_3:7359104-7359123 None:intergenic 20.0%
!! AACAATAATTGAAAGAAACA+CGG - chr5_3:7359555-7359574 None:intergenic 20.0%
! AATTCCAAAAATCAACTTCT+GGG - chr5_3:7356324-7356343 None:intergenic 25.0%
! AAATTCCAAAAATCAACTTC+TGG - chr5_3:7356325-7356344 None:intergenic 25.0%
!!! AAGTTGATTTTTGGAATTTG+AGG + chr5_3:7356326-7356345 Msa0795410:intron 25.0%
! TGAAATATGGTAAAAATCAG+TGG + chr5_3:7356719-7356738 Msa0795410:CDS 25.0%
! GAAATATGGTAAAAATCAGT+GGG + chr5_3:7356720-7356739 Msa0795410:CDS 25.0%
! AATTTCATCCAATTCTTGAT+CGG - chr5_3:7357580-7357599 None:intergenic 25.0%
!! ATGTGAATTTCCTTTTTCTT+AGG - chr5_3:7357867-7357886 None:intergenic 25.0%
! ATGAAGAAAAGCGAATTAAA+AGG - chr5_3:7358613-7358632 None:intergenic 25.0%
! TTGTCCGATTATTAATTACT+TGG + chr5_3:7358742-7358761 Msa0795410:intron 25.0%
! GATGCCAAGTAATTAATAAT+CGG - chr5_3:7358749-7358768 None:intergenic 25.0%
!! ATTTTTACATAAGATTCCAG+TGG - chr5_3:7358811-7358830 None:intergenic 25.0%
!! TTTTATCTGTTGTTCTCAAT+AGG + chr5_3:7359200-7359219 Msa0795410:intron 25.0%
! ATTACAAAACCAACTTTGAA+GGG - chr5_3:7359650-7359669 None:intergenic 25.0%
! TATTACAAAACCAACTTTGA+AGG - chr5_3:7359651-7359670 None:intergenic 25.0%
!!! AATTGCAACAGTTTTAAGTT+AGG - chr5_3:7359688-7359707 None:intergenic 25.0%
! GAATTGCATTTCATTATTGT+GGG + chr5_3:7359763-7359782 Msa0795410:three_prime_UTR 25.0%
CGAAATCAATGAATTGTAAG+AGG - chr5_3:7356197-7356216 None:intergenic 30.0%
!! CCATTACAATCGATTTTCTA+GGG + chr5_3:7356245-7356264 Msa0795410:intron 30.0%
CAACGAAATCCAATTGTTTA+GGG - chr5_3:7356296-7356315 None:intergenic 30.0%
!! AGGTTGTCATTGTTTGTTTT+TGG + chr5_3:7356346-7356365 Msa0795410:intron 30.0%
TAGAGGTCAAATGCAATTAA+GGG - chr5_3:7356409-7356428 None:intergenic 30.0%
AACTGATATGACAGTAGAAA+GGG - chr5_3:7356459-7356478 None:intergenic 30.0%
AAAGCTGCTGTTATGAAATA+TGG + chr5_3:7356706-7356725 Msa0795410:CDS 30.0%
CGAAAGGTAAAAAAGCAAAA+AGG + chr5_3:7357151-7357170 Msa0795410:CDS 30.0%
AAAAAGCAAAAAGGAAAGCT+AGG + chr5_3:7357160-7357179 Msa0795410:CDS 30.0%
AAAAGCAAAAAGGAAAGCTA+GGG + chr5_3:7357161-7357180 Msa0795410:CDS 30.0%
ACAGAAAAAGAGAGAATTGA+AGG + chr5_3:7357221-7357240 Msa0795410:CDS 30.0%
!!! TTATTTTGATGTTGCTGATG+AGG + chr5_3:7357335-7357354 Msa0795410:CDS 30.0%
CAAGTTCTTCTATAGTAGTA+GGG - chr5_3:7357386-7357405 None:intergenic 30.0%
TCAAGTTCTTCTATAGTAGT+AGG - chr5_3:7357387-7357406 None:intergenic 30.0%
TACTACTATAGAAGAACTTG+AGG + chr5_3:7357386-7357405 Msa0795410:CDS 30.0%
ACTACTATAGAAGAACTTGA+GGG + chr5_3:7357387-7357406 Msa0795410:CDS 30.0%
! ATCTCTTTCTAACTGTTTCT+GGG - chr5_3:7357527-7357546 None:intergenic 30.0%
GCTACATATCAATGAAGATA+TGG + chr5_3:7358016-7358035 Msa0795410:CDS 30.0%
!! ACTATCTGGTACTCATTTTT+AGG - chr5_3:7358128-7358147 None:intergenic 30.0%
AACGATCAAAAGTCATTCAA+AGG + chr5_3:7358267-7358286 Msa0795410:CDS 30.0%
ACGATCAAAAGTCATTCAAA+GGG + chr5_3:7358268-7358287 Msa0795410:CDS 30.0%
AATATGCAACTAGCTCATAA+AGG - chr5_3:7358878-7358897 None:intergenic 30.0%
TATGAGCTAGTTGCATATTA+TGG + chr5_3:7358879-7358898 Msa0795410:intron 30.0%
TAGGGAATACATGTTGTAAA+AGG - chr5_3:7359044-7359063 None:intergenic 30.0%
TGACTCCTTAAATTTGACTA+TGG + chr5_3:7359125-7359144 Msa0795410:intron 30.0%
CATCTCCATAGTCAAATTTA+AGG - chr5_3:7359133-7359152 None:intergenic 30.0%
!! CTGTTGCAATTGTTGATTTA+TGG + chr5_3:7359697-7359716 Msa0795410:three_prime_UTR 30.0%
ATGGATCTCAACTAATTAGT+AGG + chr5_3:7359716-7359735 Msa0795410:three_prime_UTR 30.0%
TGGATCTCAACTAATTAGTA+GGG + chr5_3:7359717-7359736 Msa0795410:three_prime_UTR 30.0%
GGAATTGCATTTCATTATTG+TGG + chr5_3:7359762-7359781 Msa0795410:three_prime_UTR 30.0%
AAGCAAGAGATTAATACCTG+CGG - chr5_3:7356136-7356155 None:intergenic 35.0%
!! GCCATTACAATCGATTTTCT+AGG + chr5_3:7356244-7356263 Msa0795410:intron 35.0%
CCCTAGAAAATCGATTGTAA+TGG - chr5_3:7356248-7356267 None:intergenic 35.0%
CCAACGAAATCCAATTGTTT+AGG - chr5_3:7356297-7356316 None:intergenic 35.0%
CCTAAACAATTGGATTTCGT+TGG + chr5_3:7356294-7356313 Msa0795410:intron 35.0%
!! AATGCAATTAAGGGTTGGTT+TGG - chr5_3:7356400-7356419 None:intergenic 35.0%
GTAGAGGTCAAATGCAATTA+AGG - chr5_3:7356410-7356429 None:intergenic 35.0%
TACTTGTACATCACCGAATT+CGG + chr5_3:7356427-7356446 Msa0795410:intron 35.0%
ACTGATATGACAGTAGAAAG+GGG - chr5_3:7356458-7356477 None:intergenic 35.0%
GAACTGATATGACAGTAGAA+AGG - chr5_3:7356460-7356479 None:intergenic 35.0%
GAGATTGATACAAGTAGCTA+GGG - chr5_3:7356498-7356517 None:intergenic 35.0%
AGAGATTGATACAAGTAGCT+AGG - chr5_3:7356499-7356518 None:intergenic 35.0%
TTTGTATTCCTCTCACGAAA+CGG - chr5_3:7356629-7356648 None:intergenic 35.0%
ATTTCATAACAGCAGCTTTC+AGG - chr5_3:7356705-7356724 None:intergenic 35.0%
ACTAATGGTTCTCCAACTAA+TGG - chr5_3:7356902-7356921 None:intergenic 35.0%
TCATACTCATCCATATCAAC+AGG - chr5_3:7357090-7357109 None:intergenic 35.0%
TGATATGGATGAGTATGAGA+AGG + chr5_3:7357092-7357111 Msa0795410:CDS 35.0%
CTACTATAGAAGAACTTGAG+GGG + chr5_3:7357388-7357407 Msa0795410:CDS 35.0%
GAAAAGAAGGATTGATGTTG+AGG + chr5_3:7357410-7357429 Msa0795410:CDS 35.0%
CAAGGAATAAAATTGCAGAG+AGG + chr5_3:7357457-7357476 Msa0795410:CDS 35.0%
GATCTCTTTCTAACTGTTTC+TGG - chr5_3:7357528-7357547 None:intergenic 35.0%
AATTCTTGATCGGAAATCTG+AGG - chr5_3:7357570-7357589 None:intergenic 35.0%
TCAGATTTCCGATCAAGAAT+TGG + chr5_3:7357569-7357588 Msa0795410:CDS 35.0%
ATTGGATGAAATTGCCAAGT+TGG + chr5_3:7357587-7357606 Msa0795410:CDS 35.0%
TTGGATGAAATTGCCAAGTT+GGG + chr5_3:7357588-7357607 Msa0795410:CDS 35.0%
TAAAGGAGATGCTATCATGA+TGG + chr5_3:7357746-7357765 Msa0795410:CDS 35.0%
! CATGATGGAAGCTGAAAATT+TGG + chr5_3:7357761-7357780 Msa0795410:CDS 35.0%
! TTGCATCCTTCAGATTTTTC+TGG + chr5_3:7357834-7357853 Msa0795410:CDS 35.0%
! TGCATCCTTCAGATTTTTCT+GGG + chr5_3:7357835-7357854 Msa0795410:CDS 35.0%
TCTTCAGCATCTTCTTGAAT+TGG - chr5_3:7358158-7358177 None:intergenic 35.0%
AGAGGATATGTCTGATAGAA+TGG + chr5_3:7358196-7358215 Msa0795410:CDS 35.0%
TGATAGAATGGCTAGAGAAA+AGG + chr5_3:7358208-7358227 Msa0795410:CDS 35.0%
CCTGATAATCTTCTATGACA+GGG - chr5_3:7358526-7358545 None:intergenic 35.0%
TCCTGATAATCTTCTATGAC+AGG - chr5_3:7358527-7358546 None:intergenic 35.0%
TGTCATAGAAGATTATCAGG+AGG + chr5_3:7358526-7358545 Msa0795410:CDS 35.0%
TAAGATTCCAGTGGTTTCAA+AGG - chr5_3:7358802-7358821 None:intergenic 35.0%
TCGGCGAATTAAGGTAAATA+GGG - chr5_3:7359062-7359081 None:intergenic 35.0%
TTCGGCGAATTAAGGTAAAT+AGG - chr5_3:7359063-7359082 None:intergenic 35.0%
TACTATCATTCGGCGAATTA+AGG - chr5_3:7359071-7359090 None:intergenic 35.0%
TTGATAGACCATATGTGTTG+CGG - chr5_3:7359350-7359369 None:intergenic 35.0%
! TTTGTAGTTGTCTAGTTCCT+TGG + chr5_3:7359585-7359604 Msa0795410:three_prime_UTR 35.0%
TCTCAACTAATTAGTAGGGT+AGG + chr5_3:7359721-7359740 Msa0795410:three_prime_UTR 35.0%
! TAACAGAGTAAGGCCCTTTT+TGG - chr5_3:7356044-7356063 None:intergenic 40.0%
! AGGGTTCTGATAACAGAGTA+AGG - chr5_3:7356054-7356073 None:intergenic 40.0%
AGAGATTAATACCTGCGGTT+TGG - chr5_3:7356131-7356150 None:intergenic 40.0%
! ATCCAATTGTTTAGGGTGAG+CGG - chr5_3:7356289-7356308 None:intergenic 40.0%
CCAAAAATCAACTTCTGGGT+CGG - chr5_3:7356320-7356339 None:intergenic 40.0%
GGTCAAATGCAATTAAGGGT+TGG - chr5_3:7356405-7356424 None:intergenic 40.0%
! ATTCGGTGATGTACAAGTAG+AGG - chr5_3:7356426-7356445 None:intergenic 40.0%
ACTTGTACATCACCGAATTC+GGG + chr5_3:7356428-7356447 Msa0795410:intron 40.0%
! AAGTAGCTAGGGTTCTGATA+TGG - chr5_3:7356487-7356506 None:intergenic 40.0%
TTGTATTCCTCTCACGAAAC+GGG - chr5_3:7356628-7356647 None:intergenic 40.0%
AGTGTTGCCAAAATGAGCAT+AGG + chr5_3:7356652-7356671 Msa0795410:exon 40.0%
! CCAAACACCTATGCTCATTT+TGG - chr5_3:7356662-7356681 None:intergenic 40.0%
CCAAAATGAGCATAGGTGTT+TGG + chr5_3:7356659-7356678 Msa0795410:exon 40.0%
AGCTTTCAGGATTTCATCCT+CGG - chr5_3:7356692-7356711 None:intergenic 40.0%
TGCAGATTTGCAAACGAGTA+GGG - chr5_3:7356758-7356777 None:intergenic 40.0%
TTGCAGATTTGCAAACGAGT+AGG - chr5_3:7356759-7356778 None:intergenic 40.0%
CAAAACAGTGTAAAGCTCGT+TGG + chr5_3:7356776-7356795 Msa0795410:CDS 40.0%
CACTCAGTCTTCTTAATGGA+AGG - chr5_3:7356817-7356836 None:intergenic 40.0%
CTTCCATTAAGAAGACTGAG+TGG + chr5_3:7356815-7356834 Msa0795410:CDS 40.0%
AGTCCACTCAGTCTTCTTAA+TGG - chr5_3:7356821-7356840 None:intergenic 40.0%
AACCATTAGTGCTACCATTG+TGG + chr5_3:7356912-7356931 Msa0795410:CDS 40.0%
ACCATTAGTGCTACCATTGT+GGG + chr5_3:7356913-7356932 Msa0795410:CDS 40.0%
GTTATCGTCCTTAACACAAG+CGG - chr5_3:7356986-7357005 None:intergenic 40.0%
AAGGACGATAACTATGATCC+TGG + chr5_3:7356994-7357013 Msa0795410:CDS 40.0%
TCATCCATATCAACAGGATC+GGG - chr5_3:7357084-7357103 None:intergenic 40.0%
CTCATCCATATCAACAGGAT+CGG - chr5_3:7357085-7357104 None:intergenic 40.0%
CAGAAATTCCGTTTGAGAAG+AGG + chr5_3:7357301-7357320 Msa0795410:CDS 40.0%
ACATCAAAATAACCCAGAGG+AGG - chr5_3:7357327-7357346 None:intergenic 40.0%
GCAACATCAAAATAACCCAG+AGG - chr5_3:7357330-7357349 None:intergenic 40.0%
TTGATGTTGCTGATGAGGAT+AGG + chr5_3:7357340-7357359 Msa0795410:CDS 40.0%
TGATGTTGCTGATGAGGATA+GGG + chr5_3:7357341-7357360 Msa0795410:CDS 40.0%
AAGAACTTGAGGGGAAAAGA+AGG + chr5_3:7357397-7357416 Msa0795410:CDS 40.0%
TGGGTGTCTGTGGATAATTA+GGG - chr5_3:7357680-7357699 None:intergenic 40.0%
TTGGGTGTCTGTGGATAATT+AGG - chr5_3:7357681-7357700 None:intergenic 40.0%
TTCTTAAAGGAGTCATGGCT+TGG - chr5_3:7357704-7357723 None:intergenic 40.0%
AGGAGTTCTTAAAGGAGTCA+TGG - chr5_3:7357709-7357728 None:intergenic 40.0%
! GTTCTCTGAGGAGTTCTTAA+AGG - chr5_3:7357717-7357736 None:intergenic 40.0%
ATAGCATCTCCTTTACTAGC+TGG - chr5_3:7357741-7357760 None:intergenic 40.0%
AAATCTGAAGGATGCAACTC+CGG - chr5_3:7357831-7357850 None:intergenic 40.0%
! GCATCCTTCAGATTTTTCTG+GGG + chr5_3:7357836-7357855 Msa0795410:CDS 40.0%
AAAGAAAAACCATCCCTTGC+CGG - chr5_3:7357960-7357979 None:intergenic 40.0%
! GCAAGGGATGGTTTTTCTTT+TGG + chr5_3:7357960-7357979 Msa0795410:CDS 40.0%
ATGAAAAAAAGTCTGCGCTC+TGG + chr5_3:7358083-7358102 Msa0795410:CDS 40.0%
!! ACTCATTTTTAGGCTGTGGA+AGG - chr5_3:7358118-7358137 None:intergenic 40.0%
!! TGGTACTCATTTTTAGGCTG+TGG - chr5_3:7358122-7358141 None:intergenic 40.0%
GAATTGGTTGCATCACTATC+TGG - chr5_3:7358142-7358161 None:intergenic 40.0%
ATCCTCTTCAATCTTCTCCT+CGG - chr5_3:7358183-7358202 None:intergenic 40.0%
TAGAGAAAAGGCAGAAGAAG+AGG + chr5_3:7358220-7358239 Msa0795410:CDS 40.0%
TCATTCAAAGGGAACTTCCT+AGG + chr5_3:7358279-7358298 Msa0795410:CDS 40.0%
AACTCCTTGATAAGAGCTGA+CGG + chr5_3:7358332-7358351 Msa0795410:CDS 40.0%
CTCCTTTCTTATCATCTCGT+CGG - chr5_3:7358399-7358418 None:intergenic 40.0%
!! TTATTTGCTATCTCCTCACG+CGG - chr5_3:7358458-7358477 None:intergenic 40.0%
GCAAATAAGGAGAGAGAGAA+AGG + chr5_3:7358470-7358489 Msa0795410:CDS 40.0%
CCCTGTCATAGAAGATTATC+AGG + chr5_3:7358523-7358542 Msa0795410:CDS 40.0%
! TTGTTCACCTTTTCACCCTT+TGG + chr5_3:7358648-7358667 Msa0795410:intron 40.0%
! TGTTCACCTTTTCACCCTTT+GGG + chr5_3:7358649-7358668 Msa0795410:intron 40.0%
! TGGTTTCAAAGGCGTGAAAA+GGG - chr5_3:7358791-7358810 None:intergenic 40.0%
GAGCTAGTTGCATATTATGG+TGG + chr5_3:7358882-7358901 Msa0795410:intron 40.0%
TGCTTCAACAAAATCCTCGA+GGG - chr5_3:7359289-7359308 None:intergenic 40.0%
TTTGATACCCGCAACACATA+TGG + chr5_3:7359339-7359358 Msa0795410:CDS 40.0%
TGATAGACCATATGTGTTGC+GGG - chr5_3:7359349-7359368 None:intergenic 40.0%
! TATGGTCTATCAAGTGTTGC+TGG + chr5_3:7359357-7359376 Msa0795410:CDS 40.0%
TGAGAATGTGAGAAGTAAGC+TGG + chr5_3:7359416-7359435 Msa0795410:CDS 40.0%
TGAGAAGTAAGCTGGATGAT+GGG + chr5_3:7359424-7359443 Msa0795410:CDS 40.0%
! GATGATTCGACTTGAGAAGA+AGG + chr5_3:7359455-7359474 Msa0795410:CDS 40.0%
AAGGTTACATTACTCACGCA+AGG + chr5_3:7359474-7359493 Msa0795410:CDS 40.0%
AGGTTACATTACTCACGCAA+GGG + chr5_3:7359475-7359494 Msa0795410:CDS 40.0%
TAGAATCTCAGTAGCATCCA+AGG - chr5_3:7359605-7359624 None:intergenic 40.0%
GTCTAAATGCCCTTCAAAGT+TGG + chr5_3:7359638-7359657 Msa0795410:three_prime_UTR 40.0%
AGGAGATCATGTAGATCTGT+TGG + chr5_3:7359741-7359760 Msa0795410:three_prime_UTR 40.0%
!!! GAGTAAGGCCCTTTTTGGTT+TGG - chr5_3:7356039-7356058 None:intergenic 45.0%
TTCCGCTCACCCTAAACAAT+TGG + chr5_3:7356284-7356303 Msa0795410:intron 45.0%
!! CCGACCCAGAAGTTGATTTT+TGG + chr5_3:7356317-7356336 Msa0795410:intron 45.0%
! TAGCTAGGGTTCTGATATGG+TGG - chr5_3:7356484-7356503 None:intergenic 45.0%
AGGTGTTTGGAAAAACACCG+AGG + chr5_3:7356672-7356691 Msa0795410:CDS 45.0%
GTAAAGCTCGTTGGTATGAG+TGG + chr5_3:7356785-7356804 Msa0795410:CDS 45.0%
CTAATGGTTCTCCACTGAGT+AGG - chr5_3:7356886-7356905 None:intergenic 45.0%
CTCAGTGGAGAACCATTAGT+TGG + chr5_3:7356887-7356906 Msa0795410:CDS 45.0%
ACCCACAATGGTAGCACTAA+TGG - chr5_3:7356917-7356936 None:intergenic 45.0%
AATTTCCTAGGGTCATCACC+AGG - chr5_3:7357015-7357034 None:intergenic 45.0%
! TGCTTTCAGAAGCATGTGCT+CGG + chr5_3:7357118-7357137 Msa0795410:CDS 45.0%
AAGAGAGAATTGAAGGCTGC+TGG + chr5_3:7357228-7357247 Msa0795410:CDS 45.0%
AGAGAGAATTGAAGGCTGCT+GGG + chr5_3:7357229-7357248 Msa0795410:CDS 45.0%
AGGCTGCTGGGATTGATATA+AGG + chr5_3:7357241-7357260 Msa0795410:CDS 45.0%
CTGGGATTGATATAAGGCAG+CGG + chr5_3:7357247-7357266 Msa0795410:CDS 45.0%
TGAGAAAGCAAGACGTTGCA+AGG + chr5_3:7357439-7357458 Msa0795410:CDS 45.0%
TTCTGGGTCATTCAGCTTCT+TGG - chr5_3:7357511-7357530 None:intergenic 45.0%
TCTTGATCGGAAATCTGAGG+TGG - chr5_3:7357567-7357586 None:intergenic 45.0%
GTCAATGGCATAACCCAACT+TGG - chr5_3:7357604-7357623 None:intergenic 45.0%
GGTTATGCCATTGACCTTGT+GGG + chr5_3:7357609-7357628 Msa0795410:CDS 45.0%
!! AAAGGAGTCATGGCTTGGTT+GGG - chr5_3:7357699-7357718 None:intergenic 45.0%
!! TAAAGGAGTCATGGCTTGGT+TGG - chr5_3:7357700-7357719 None:intergenic 45.0%
TTACTAGCTGGTGTTCTCTG+AGG - chr5_3:7357729-7357748 None:intergenic 45.0%
CAGAGAACACCAGCTAGTAA+AGG + chr5_3:7357729-7357748 Msa0795410:CDS 45.0%
TGGAAGCTGAAAATTTGGCC+AGG + chr5_3:7357766-7357785 Msa0795410:CDS 45.0%
TGAAAATTTGGCCAGGCTGA+GGG + chr5_3:7357773-7357792 Msa0795410:CDS 45.0%
AATCTGAAGGATGCAACTCC+GGG - chr5_3:7357830-7357849 None:intergenic 45.0%
GTGACCCCAGAAAAATCTGA+AGG - chr5_3:7357843-7357862 None:intergenic 45.0%
TGGGGTCACTCCTAAGAAAA+AGG + chr5_3:7357854-7357873 Msa0795410:CDS 45.0%
! TTCTTTTGGCATGACTCCGA+AGG + chr5_3:7357974-7357993 Msa0795410:CDS 45.0%
! TCTTTTGGCATGACTCCGAA+GGG + chr5_3:7357975-7357994 Msa0795410:CDS 45.0%
ATATGTAGCTCATCCCTGAG+AGG - chr5_3:7358005-7358024 None:intergenic 45.0%
ATAGTGCTAGACTCGAGCTA+CGG + chr5_3:7358048-7358067 Msa0795410:CDS 45.0%
TCCTCTTCAATCTTCTCCTC+GGG - chr5_3:7358182-7358201 None:intergenic 45.0%
AAAAGGCAGAAGAAGAGGCA+CGG + chr5_3:7358225-7358244 Msa0795410:CDS 45.0%
CTAATAAGCTCCAGAGATGC+TGG - chr5_3:7358311-7358330 None:intergenic 45.0%
!! CAGCATCTCTGGAGCTTATT+AGG + chr5_3:7358309-7358328 Msa0795410:CDS 45.0%
AGCCGACGAGATGATAAGAA+AGG + chr5_3:7358394-7358413 Msa0795410:CDS 45.0%
!! AAAGGAGCTTCTAGCCTTAC+TGG + chr5_3:7358412-7358431 Msa0795410:CDS 45.0%
AGCATTGTCATGCTCCAGTA+AGG - chr5_3:7358429-7358448 None:intergenic 45.0%
GCGTGAGGAGATAGCAAATA+AGG + chr5_3:7358457-7358476 Msa0795410:CDS 45.0%
GATCCAAACGAGCAGCAAAT+GGG + chr5_3:7358492-7358511 Msa0795410:CDS 45.0%
TCTTCTATGACAGGGATAGC+AGG - chr5_3:7358518-7358537 None:intergenic 45.0%
! GTTCACCTTTTCACCCTTTG+GGG + chr5_3:7358650-7358669 Msa0795410:intron 45.0%
! TTCACCTTTTCACCCTTTGG+GGG + chr5_3:7358651-7358670 Msa0795410:intron 45.0%
! GGTTTCAAAGGCGTGAAAAG+GGG - chr5_3:7358790-7358809 None:intergenic 45.0%
! GTGGTTTCAAAGGCGTGAAA+AGG - chr5_3:7358792-7358811 None:intergenic 45.0%
!! TTTCACGCCTTTGAAACCAC+TGG + chr5_3:7358792-7358811 Msa0795410:intron 45.0%
CATTGCCTCACGAAGATACT+GGG - chr5_3:7359250-7359269 None:intergenic 45.0%
CAGTATCTTCGTGAGGCAAT+GGG + chr5_3:7359249-7359268 Msa0795410:CDS 45.0%
AGTATCTTCGTGAGGCAATG+GGG + chr5_3:7359250-7359269 Msa0795410:CDS 45.0%
GCATGAAAATGATTCCCTCG+AGG + chr5_3:7359272-7359291 Msa0795410:CDS 45.0%
GTGCTTCAACAAAATCCTCG+AGG - chr5_3:7359290-7359309 None:intergenic 45.0%
GTGAGAAGTAAGCTGGATGA+TGG + chr5_3:7359423-7359442 Msa0795410:CDS 45.0%
!! AAGTAAGCTGGATGATGGGA+AGG + chr5_3:7359428-7359447 Msa0795410:CDS 45.0%
!! AAAATTAAATAGAAAAAATT+TGG + chr5_3:7358826-7358845 Msa0795410:intron 5.0%
GAGCGCGAGATAGATAGCTA+GGG - chr5_3:7356073-7356092 None:intergenic 50.0%
AGAGCGCGAGATAGATAGCT+AGG - chr5_3:7356074-7356093 None:intergenic 50.0%
! GTTTGGTGAAGACGACGATG+CGG - chr5_3:7356114-7356133 None:intergenic 50.0%
! TTTAGGGTGAGCGGAAGAGA+GGG - chr5_3:7356280-7356299 None:intergenic 50.0%
GAAAGGGGTAGTCCCGAATT+CGG - chr5_3:7356443-7356462 None:intergenic 50.0%
TAAACGAGTCTCCTGCACTG+TGG + chr5_3:7356588-7356607 Msa0795410:five_prime_UTR 50.0%
! CTCCTGCACTGTGGTTTTTC+CGG + chr5_3:7356597-7356616 Msa0795410:five_prime_UTR 50.0%
AACCGGAAAAACCACAGTGC+AGG - chr5_3:7356602-7356621 None:intergenic 50.0%
!! TCTCACGAAACGGGTTGAAC+CGG - chr5_3:7356619-7356638 None:intergenic 50.0%
CTAAGCTTACGCCTACTCAG+TGG + chr5_3:7356872-7356891 Msa0795410:CDS 50.0%
CTCCTTCGCAGTGTCTTGAA+CGG + chr5_3:7356941-7356960 Msa0795410:CDS 50.0%
TACCGTTCAAGACACTGCGA+AGG - chr5_3:7356946-7356965 None:intergenic 50.0%
! ATGATCCTGGTGATGACCCT+AGG + chr5_3:7357007-7357026 Msa0795410:CDS 50.0%
ACCCTAGGAAATTGCGTCCA+GGG + chr5_3:7357022-7357041 Msa0795410:CDS 50.0%
GCAGGCTTCGATTCAGGATT+CGG - chr5_3:7357057-7357076 None:intergenic 50.0%
ACGACCCGATCCTGTTGATA+TGG + chr5_3:7357077-7357096 Msa0795410:CDS 50.0%
! TTCAGAAGCATGTGCTCGGT+TGG + chr5_3:7357122-7357141 Msa0795410:CDS 50.0%
AGCTAGGGAGAAACAGCTTG+AGG + chr5_3:7357176-7357195 Msa0795410:CDS 50.0%
AGAAACAGCTTGAGGAAGCG+AGG + chr5_3:7357184-7357203 Msa0795410:CDS 50.0%
GGATTGATATAAGGCAGCGG+AGG + chr5_3:7357250-7357269 Msa0795410:CDS 50.0%
TTGATATAAGGCAGCGGAGG+AGG + chr5_3:7357253-7357272 Msa0795410:CDS 50.0%
AGAGGAGGCCTCTTCTCAAA+CGG - chr5_3:7357312-7357331 None:intergenic 50.0%
TTTGAGAAGAGGCCTCCTCT+GGG + chr5_3:7357312-7357331 Msa0795410:CDS 50.0%
TGTTGCTGATGAGGATAGGG+AGG + chr5_3:7357344-7357363 Msa0795410:CDS 50.0%
TTGGCATGCAGAATAGCAGC+CGG - chr5_3:7357492-7357511 None:intergenic 50.0%
! TGATCGGAAATCTGAGGTGG+TGG - chr5_3:7357564-7357583 None:intergenic 50.0%
GGGTTATGCCATTGACCTTG+TGG + chr5_3:7357608-7357627 Msa0795410:CDS 50.0%
ACGAGTAGCACTGCTACCTT+CGG - chr5_3:7357649-7357668 None:intergenic 50.0%
CTGAAAATTTGGCCAGGCTG+AGG + chr5_3:7357772-7357791 Msa0795410:CDS 50.0%
GAGTCTCAGACACCACTGTT+AGG + chr5_3:7357795-7357814 Msa0795410:CDS 50.0%
TCTCAGACACCACTGTTAGG+AGG + chr5_3:7357798-7357817 Msa0795410:CDS 50.0%
ACTGTTAGGAGGAGAGAACC+CGG + chr5_3:7357809-7357828 Msa0795410:CDS 50.0%
! CCATACCACTTCTGGGAGTA+AGG - chr5_3:7357935-7357954 None:intergenic 50.0%
CCTTACTCCCAGAAGTGGTA+TGG + chr5_3:7357932-7357951 Msa0795410:CDS 50.0%
ATAAGCTCCAGAGATGCTGG+AGG - chr5_3:7358308-7358327 None:intergenic 50.0%
GTCTCCGTCAGCTCTTATCA+AGG - chr5_3:7358339-7358358 None:intergenic 50.0%
!! TCTCGTCGGCTTGCTCAATA+GGG - chr5_3:7358385-7358404 None:intergenic 50.0%
!! ATCTCGTCGGCTTGCTCAAT+AGG - chr5_3:7358386-7358405 None:intergenic 50.0%
CAATGCTAAGTATCCGCGTG+AGG + chr5_3:7358442-7358461 Msa0795410:CDS 50.0%
GGATCCAAACGAGCAGCAAA+TGG + chr5_3:7358491-7358510 Msa0795410:CDS 50.0%
TGTACCCCCAAAGGGTGAAA+AGG - chr5_3:7358658-7358677 None:intergenic 50.0%
TCACGTTGTGTACCCCCAAA+GGG - chr5_3:7358666-7358685 None:intergenic 50.0%
ATCACGTTGTGTACCCCCAA+AGG - chr5_3:7358667-7358686 None:intergenic 50.0%
TGAAGCCCAGTATCTTCGTG+AGG + chr5_3:7359242-7359261 Msa0795410:CDS 50.0%
CCATTGCCTCACGAAGATAC+TGG - chr5_3:7359251-7359270 None:intergenic 50.0%
CCAGTATCTTCGTGAGGCAA+TGG + chr5_3:7359248-7359267 Msa0795410:CDS 50.0%
GTGAGCGGAAGAGAGGGAAT+AGG - chr5_3:7356274-7356293 None:intergenic 55.0%
! GTTTAGGGTGAGCGGAAGAG+AGG - chr5_3:7356281-7356300 None:intergenic 55.0%
GGTTCAACCCGTTTCGTGAG+AGG + chr5_3:7356618-7356637 Msa0795410:five_prime_UTR 55.0%
! GACTGAGTGGACTCGAGAAG+AGG + chr5_3:7356828-7356847 Msa0795410:CDS 55.0%
! CGAAGGAGTACGACCCACAA+TGG - chr5_3:7356929-7356948 None:intergenic 55.0%
CCTTAACACAAGCGGCGTCA+AGG - chr5_3:7356978-7356997 None:intergenic 55.0%
CCTTGACGCCGCTTGTGTTA+AGG + chr5_3:7356975-7356994 Msa0795410:CDS 55.0%
GACCCTAGGAAATTGCGTCC+AGG + chr5_3:7357021-7357040 Msa0795410:CDS 55.0%
CCCCTGGACGCAATTTCCTA+GGG - chr5_3:7357026-7357045 None:intergenic 55.0%
CCCTAGGAAATTGCGTCCAG+GGG + chr5_3:7357023-7357042 Msa0795410:CDS 55.0%
TCCCCTGGACGCAATTTCCT+AGG - chr5_3:7357027-7357046 None:intergenic 55.0%
GGATTCGGATCAATCTCCCC+TGG - chr5_3:7357042-7357061 None:intergenic 55.0%
! GCTCGGTTGGCTAACACGAA+AGG + chr5_3:7357135-7357154 Msa0795410:CDS 55.0%
AACAGCTTGAGGAAGCGAGG+AGG + chr5_3:7357187-7357206 Msa0795410:CDS 55.0%
TAAGGCAGCGGAGGAGGAAA+AGG + chr5_3:7357259-7357278 Msa0795410:CDS 55.0%
AGCGGAGGAGGAAAAGGAGA+GGG + chr5_3:7357265-7357284 Msa0795410:CDS 55.0%
GTTTGAGAAGAGGCCTCCTC+TGG + chr5_3:7357311-7357330 Msa0795410:CDS 55.0%
TGCTGATGAGGATAGGGAGG+TGG + chr5_3:7357347-7357366 Msa0795410:CDS 55.0%
TGGCATGCAGAATAGCAGCC+GGG - chr5_3:7357491-7357510 None:intergenic 55.0%
ATCGCTGCCCACAAGGTCAA+TGG - chr5_3:7357619-7357638 None:intergenic 55.0%
TGAGTTCATCGCTGCCCACA+AGG - chr5_3:7357626-7357645 None:intergenic 55.0%
!! ATGGCTTGGTTGGGTGTCTG+TGG - chr5_3:7357690-7357709 None:intergenic 55.0%
GGGTTCTCTCCTCCTAACAG+TGG - chr5_3:7357810-7357829 None:intergenic 55.0%
TTGCAGAGGGAGTCAGCAGT+GGG - chr5_3:7357896-7357915 None:intergenic 55.0%
AGTAAGGCCTGCACTTCCAG+GGG - chr5_3:7357919-7357938 None:intergenic 55.0%
GAGTAAGGCCTGCACTTCCA+GGG - chr5_3:7357920-7357939 None:intergenic 55.0%
TCCGAAGGGAACTCCTCTCA+GGG + chr5_3:7357989-7358008 Msa0795410:CDS 55.0%
TCCCTGAGAGGAGTTCCCTT+CGG - chr5_3:7357993-7358012 None:intergenic 55.0%
AGAAGATGCTGAAGAGCCCG+AGG + chr5_3:7358163-7358182 Msa0795410:CDS 55.0%
GCCCGAGGAGAAGATTGAAG+AGG + chr5_3:7358178-7358197 Msa0795410:CDS 55.0%
! AGAAGAAGAGGCACGGCAGA+AGG + chr5_3:7358232-7358251 Msa0795410:CDS 55.0%
GCTTGCTCAATAGGGGTTGG+TGG - chr5_3:7358377-7358396 None:intergenic 55.0%
! TCGGCTTGCTCAATAGGGGT+TGG - chr5_3:7358380-7358399 None:intergenic 55.0%
!! CTCGTCGGCTTGCTCAATAG+GGG - chr5_3:7358384-7358403 None:intergenic 55.0%
! AGGCCCATTTGCTGCTCGTT+TGG - chr5_3:7358498-7358517 None:intergenic 55.0%
TGGTGAAGACGACGATGCGG+CGG - chr5_3:7356111-7356130 None:intergenic 60.0%
CGTCGTCTTCACCAAACCGC+AGG + chr5_3:7356117-7356136 Msa0795410:five_prime_UTR 60.0%
GGTCGTGCAGGCTTCGATTC+AGG - chr5_3:7357063-7357082 None:intergenic 60.0%
TCAACAGGATCGGGTCGTGC+AGG - chr5_3:7357075-7357094 None:intergenic 60.0%
CAGCGGAGGAGGAAAAGGAG+AGG + chr5_3:7357264-7357283 Msa0795410:CDS 60.0%
TGCAGAGAGGCAAGATGCCC+CGG + chr5_3:7357470-7357489 Msa0795410:CDS 60.0%
GGCATGCAGAATAGCAGCCG+GGG - chr5_3:7357490-7357509 None:intergenic 60.0%
GGCAGCGATGAACTCACCGA+AGG + chr5_3:7357630-7357649 Msa0795410:CDS 60.0%
! TGTCTGAGACTCCCTCAGCC+TGG - chr5_3:7357787-7357806 None:intergenic 60.0%
GAGGGAGTCAGCAGTGGGAT+TGG - chr5_3:7357891-7357910 None:intergenic 60.0%
GTTGCAGAGGGAGTCAGCAG+TGG - chr5_3:7357897-7357916 None:intergenic 60.0%
GCACTTCCAGGGGTTGCAGA+GGG - chr5_3:7357909-7357928 None:intergenic 60.0%
TGCACTTCCAGGGGTTGCAG+AGG - chr5_3:7357910-7357929 None:intergenic 60.0%
! TCTGCAACCCCTGGAAGTGC+AGG + chr5_3:7357909-7357928 Msa0795410:CDS 60.0%
GGAGTAAGGCCTGCACTTCC+AGG - chr5_3:7357921-7357940 None:intergenic 60.0%
GCAGGCCTTACTCCCAGAAG+TGG + chr5_3:7357927-7357946 Msa0795410:CDS 60.0%
TCCCAGAAGTGGTATGGCGC+CGG + chr5_3:7357938-7357957 Msa0795410:CDS 60.0%
!! AAGTGGTATGGCGCCGGCAA+GGG + chr5_3:7357944-7357963 Msa0795410:CDS 60.0%
CTCCGAAGGGAACTCCTCTC+AGG + chr5_3:7357988-7358007 Msa0795410:CDS 60.0%
AGAGATGCTGGAGGAGGCCT+AGG - chr5_3:7358299-7358318 None:intergenic 60.0%
TAGGCCTCCTCCAGCATCTC+TGG + chr5_3:7358298-7358317 Msa0795410:CDS 60.0%
AGCTCCAGAGATGCTGGAGG+AGG - chr5_3:7358305-7358324 None:intergenic 60.0%
CTGACTCCCTCTGCAACCCC+TGG + chr5_3:7357900-7357919 Msa0795410:CDS 65.0%
GCCGGCGCCATACCACTTCT+GGG - chr5_3:7357942-7357961 None:intergenic 65.0%
TGCCGGCGCCATACCACTTC+TGG - chr5_3:7357943-7357962 None:intergenic 65.0%
!! GAAGTGGTATGGCGCCGGCA+AGG + chr5_3:7357943-7357962 Msa0795410:CDS 65.0%
!! GGTATGGCGCCGGCAAGGGA+TGG + chr5_3:7357948-7357967 Msa0795410:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 7356035 7359835 7356035 ID=Msa0795410;Name=Msa0795410
chr5_3 mRNA 7356035 7359835 7356035 ID=Msa0795410-mRNA-1;Parent=Msa0795410;Name=Msa0795410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=180|1|1|1|1|0.66|3|317|731
chr5_3 exon 7356035 7356138 7356035 ID=Msa0795410-mRNA-1:exon:2986;Parent=Msa0795410-mRNA-1
chr5_3 exon 7356588 7358562 7356588 ID=Msa0795410-mRNA-1:exon:2987;Parent=Msa0795410-mRNA-1
chr5_3 exon 7359222 7359835 7359222 ID=Msa0795410-mRNA-1:exon:2988;Parent=Msa0795410-mRNA-1
chr5_3 five_prime_UTR 7356035 7356138 7356035 ID=Msa0795410-mRNA-1:five_prime_utr;Parent=Msa0795410-mRNA-1
chr5_3 five_prime_UTR 7356588 7356663 7356588 ID=Msa0795410-mRNA-1:five_prime_utr;Parent=Msa0795410-mRNA-1
chr5_3 CDS 7356664 7358562 7356664 ID=Msa0795410-mRNA-1:cds;Parent=Msa0795410-mRNA-1
chr5_3 CDS 7359222 7359518 7359222 ID=Msa0795410-mRNA-1:cds;Parent=Msa0795410-mRNA-1
chr5_3 three_prime_UTR 7359519 7359835 7359519 ID=Msa0795410-mRNA-1:three_prime_utr;Parent=Msa0795410-mRNA-1
Gene Sequence

>Msa0795410

ATGAGCATAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCATATCTCGTCCCTACTCGTTTGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTACGCCTACTCAGTGGAGAACCATTAGTTGGAGAACCATTAGTGCTACCATTGTGGGTCGTACTCCTTCGCAGTGTCTTGAACGGTATGAGAAACTCCTTGACGCCGCTTGTGTTAAGGACGATAACTATGATCCTGGTGATGACCCTAGGAAATTGCGTCCAGGGGAGATTGATCCGAATCCTGAATCGAAGCCTGCACGACCCGATCCTGTTGATATGGATGAGTATGAGAAGGAGATGCTTTCAGAAGCATGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTTGCTTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCTGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCATGTATTCCCTACTACTATAGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCTCAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCGGCTGCTATTCTGCATGCCAAGAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCACCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCATTGACCTTGTGGGCAGCGATGAACTCACCGAAGGTAGCAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCATGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACATTCCAATCCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGGCGCCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAGACTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGAAGGCATTACTTAGAAAACGATCAAAAGTCATTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCATGACAATGCTAAGTATCCGCGTGAGGAGATAGCAAATAAGGAGAGAGAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGGCATGAAAATGATTCCCTCGAGGATTTTGTTGAAGCACATACAACATGCATTAATGATTTAATGTACTTTGATACCCGCAACACATATGGTCTATCAAGTGTTGCTGGAAACGCAGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGGAAGGAGAAGATGATTCGACTTGAGAAGAAGGTTACATTACTCACGCAAGGGTACGAGTTAAGCTACTGCTAA
Protein sequence

>Msa0795410

MSIGVWKNTEDEILKAAVMKYGKNQWAHISSLLVCKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLTPTQWRTISWRTISATIVGRTPSQCLERYEKLLDAACVKDDNYDPGDDPRKLRPGEIDPNPESKPARPDPVDMDEYEKEMLSEACARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPLGYFDVADEDREVEQHVFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHAKKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYAIDLVGSDELTEGSSATRALLPNYPQTPNQAMTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHIPIPLLTPSATPGSAGLTPRSGMAPARDGFSFGMTPKGTPLRDELHINEDMEMRDSARLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQKALLRKRSKVIQRELPRPPPASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPREEIANKEREKGSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEDFVEAHTTCINDLMYFDTRNTYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKMIRLEKKVTLLTQGYELSYC*