AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797040


Find 302 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr5_3 gene 9158643 9164908 9158643 ID=Msa0797040;Name=Msa0797040
chr5_3 mRNA 9158643 9164908 9158643 ID=Msa0797040-mRNA-1;Parent=Msa0797040;Name=Msa0797040-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.72|0.58|1|0.90|0.83|12|321|1289
chr5_3 exon 9158643 9158834 9158643 ID=Msa0797040-mRNA-1:exon:3910;Parent=Msa0797040-mRNA-1
chr5_3 exon 9158862 9159998 9158862 ID=Msa0797040-mRNA-1:exon:3909;Parent=Msa0797040-mRNA-1
chr5_3 exon 9160750 9161449 9160750 ID=Msa0797040-mRNA-1:exon:3908;Parent=Msa0797040-mRNA-1
chr5_3 exon 9161547 9161614 9161547 ID=Msa0797040-mRNA-1:exon:3907;Parent=Msa0797040-mRNA-1
chr5_3 exon 9161845 9163467 9161845 ID=Msa0797040-mRNA-1:exon:3906;Parent=Msa0797040-mRNA-1
chr5_3 exon 9163604 9163666 9163604 ID=Msa0797040-mRNA-1:exon:3905;Parent=Msa0797040-mRNA-1
chr5_3 exon 9163771 9163849 9163771 ID=Msa0797040-mRNA-1:exon:3904;Parent=Msa0797040-mRNA-1
chr5_3 exon 9163939 9164000 9163939 ID=Msa0797040-mRNA-1:exon:3903;Parent=Msa0797040-mRNA-1
chr5_3 exon 9164226 9164301 9164226 ID=Msa0797040-mRNA-1:exon:3902;Parent=Msa0797040-mRNA-1
chr5_3 exon 9164537 9164589 9164537 ID=Msa0797040-mRNA-1:exon:3901;Parent=Msa0797040-mRNA-1
chr5_3 exon 9164691 9164780 9164691 ID=Msa0797040-mRNA-1:exon:3900;Parent=Msa0797040-mRNA-1
chr5_3 exon 9164861 9164908 9164861 ID=Msa0797040-mRNA-1:exon:3899;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9164861 9164908 9164861 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9164691 9164780 9164691 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9164537 9164589 9164537 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9164226 9164301 9164226 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9163939 9164000 9163939 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9163771 9163849 9163771 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9163604 9163666 9163604 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9161845 9163467 9161845 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9161547 9161614 9161547 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9160750 9161449 9160750 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 CDS 9158991 9159998 9158991 ID=Msa0797040-mRNA-1:cds;Parent=Msa0797040-mRNA-1
chr5_3 three_prime_UTR 9158862 9158990 9158862 ID=Msa0797040-mRNA-1:three_prime_utr;Parent=Msa0797040-mRNA-1
chr5_3 three_prime_UTR 9158643 9158834 9158643 ID=Msa0797040-mRNA-1:three_prime_utr;Parent=Msa0797040-mRNA-1
Gene Sequence

>Msa0797040

ATGAACCAGTATCACATCTATGAAGCCATTGGTCGCGGAAGATACTCGACTGTTTACAAAGGTAGAAAGAAAAATACAGTCGAATATTTCGCTATCAAAAGCGTTGATAAATCTTACAAAAACAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTGGATCACCAGAATGTGCTCAATTTTTATTCATGGTATGAAACCTCTGCTCACTTATGGTTGGTATTGGAGTATTGTGTTGGAGGGGATCTACTTTCCATATTACGACAGGATAGTCAACTTCCTGAAGATTCTGTTAATGAACTTGCTTGTGACCTTGTCAGAGCTTTGCAGTATTTACATTCAAATGGAATAATCTATTGTGACCTGAAACCATCAAATATTCTACTAGATGAAAATGGGCGTACAAAGCAGCTCTGTGATTTTGGATTGGCTAGAAGGTTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAACGTGGGACACCCTCTTACATGGCTCCGGAGCTTTTTGATGATGGTGGAGTCCACTCTTATGCCTCTGATTTCTGGGCTCTAGGATGTGTACTGTATGAATGTTATGCTGGGAGGCCTCCTTTTGTGGGAAGAGAATTAACTCAGCTCGTAAAATCCATAATTCCAGACCCGACTCCACCCCTCCCTGGCAATCCAAGTCCACCTTTTGTCAATTTAATAAATTCTCTGTTAGTCAAAGATCCAGCTGAAAGAATACAGTGGCATGAGCTTTGTGGACATGCCTTTTGGAAAACCAAATTCACTGTAGTGTCTCTTCCTCCTCAACCTGCGTTTGATGATATGACAGAACTACATGCTAAACAATGTTTATCAGAACGTAATGGAGATAAGTCTTCTCATAACAGGACCCCTCCCAAATATCGTGAAAAAGATGTGAAAGGGGCAAGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGACACAAAACTCAGACAAAGGGTTCTGCCAGAACACTTGAGGCGAAGCAGAAAGATCCTTCCATTATTAAAAAAGGTTTGAATCTTTTGAGAATGTCAAGAATAGCAAAATCAAATTTACAAAAAGAAAATGAGAAAGAAAACTATCGACGTCCCTTGCCCAATGGCTCTGAGAAGGATGCCGATGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATAGTGAAGAGGATGCACTTGATGAAACTGATGGTTCTGAACACACACCTTCTGTGCCCAATGAGAAAATGGAGAGTAATTTTCAGAATCAGGGAAAAGCAGATGATACTGAAAATGATATACGCCGGTTGGACACTCCATCTGTGACTACTCCTGCCTCAGATGATTCAAGGTCATTTGTTCACGAGTCAACTCCTGACCGTTCTGACATATCTGCTATTTCTCCAAGTGTCAGCCCTCTAGTGAAAAAACAGAGGCTTAAAGATGACTTAGGATCTGGTCTTGACTCTGATTCTTCAAGATCGTCTAATGACATCTCCCATGTTATTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATTCCCAGCAGAAAAGTTGACAAAGGCTCGGAAGTCATTCCTTCACTTCCTTTTGAGGTGTTGCAAGCACCTGAATTTGTCAAGATGCCTAAAGAGCAACTGGAGGCACTCCAAAACCGAATTATAGCCATATTGAATGGGAGTACTAGCATTGGAGAGAAACAAAATGTGGTTAGGTACCTCGAGACGTTGAGCAGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATAATGCTCATTCTTGTAAAGTTGCTCCGTCAATCCAAGGCATCAGCTTTACGTGTTCAACTTGCTTCGCTGATTGGTTTGTTGATTAGACACTCTACCTTTGTTGATGACAGTTTGGCTAGTTCTGGAATTCTAGGTTCACTGATGGATGGCCTTAGGGATAGGCAAGAAAAAGTGAGGAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACTCAAAGTGCAGACTCCAGGGATAACACTCCACTTGAATCTCCATCAAAGGACAATAGGACTGTGCATGGATGGCAGGTTCCTAATTCATTGATTTCCTTGGTGTCATCAATATTGAGGAAAGGTGAAGATGATATAACTCAATTAGCGGCAGGAAAACTGGAAAGCATGAGGCTTACTGCAGGATCATGTTTGGTGCGCTTAGTTCGTTTTAATCCTCCTAGTATTCAGTCTGTTATAGAGAAGCTCTCTTTCAAGGACCTAGCTTCTGCTCTTGTCAAAGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACACGGCAATGCTTGGAAGTCATATGATCACAAATGTTGGAAGATACCTTATACAACTTGCAGAGGATAAGAATCTGATCCCAAGTCTTCTGGCTCTTTTTGAGCAGGGCAGTGAAGTTTTAAAAGGAAAGGCACTTGTCTTTGTGGCTTTCCTCTGCAAGCACGGTAGGAGGTGGCTTCCACAGTTCTTCTGTAGCCATAAGTTACTTTCAGTGGTCGACAGGCTGGGAAAAGAGAAGGATGCCTTTGTGCGACAGTGTTTAGATGCATTTCTGCATATTGTGGCATCTACTATTTCAGGTTTACTGGATATAATAACCGGAGATATTCAGCAAATGATGGGAGGAAGGCGCCATGGACATATCTCTTCCCTTACCAGCAGATCTGCTCCAAAATCCAACATTCATTTGTTTCCTGTTGTCCTTCATCTTCTTGAAAGTTCAGCTTTCAATCACAAAGTGGTGACACTTCCAGTACTACGTCAGCTGGCGAATCTGATTAAACTTGTGGAGGCACCGTTCCAGGGAAGAGATGACTTCCAGATAACCCTTCTTCGAATTTTAGAGTCTCTCACGGAGGAATCTTCTGTGATCCTTGCCAATCCTGACATTTTCTTACGTGAAATTCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGACGGTGATGCCAGATTTTTGTGCCTCAAAATATTTTTCGATGTAATGATTATTCTCTTGAGTGAACCAGTTGAGGAAGAGCAAAGATTGAACGATCTGAAATTCGTATCAATTACACATTTTATTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATATTTGCACAGAAGCTTCTTGTCATGCTACTAGAGTTCAGTTTTATTTCAATTCCGGACATTCTACACCTGAAGACAATTTCACAATGTTTTGAGTTCTTGCTTGGCGATATGTCAAATGCAAATGTGAATAATGTTAAGCTTTGTCTCGCTCTGGCTTCTGCTCCTGAAATGGAGTCCAAGTTACTCTCCCAATTGAAAGTTGTTAGGAGGGTTGGCAACTTTCTTGAGTTTGTATGTGCCAAGGGTATGGAAGAATTGCTGGAGCCAACTCTTGGGCTGTGTAGGGCCTTTCTAGCACGTTCAGTCAGCTGTACAAAAGGCTTCAGCTACACAACAGAACCAACTCTCTTAGGTGACTGTCCTGAGGTGAGTGGAGCTGTTGATTCCCAGCAATGCATAAGAGATATAGCAGACTTTGGAAGCAATGTTGGTGTCTTCCTAGAGTTGAGTGGAGAAACCAGTGTTGCTGATATAGCTTCTCAGTGTGTGGTTTTACTGCTTAAGGCTGCTCCTAGAGAAGCTACCACTGGTCTACTAACCAATCTCCCCAAGGTCATTGTGATCCTTGAATCCTGGAGTAAAGACACCCCTCACTTAACAGTGCAGAGAATGCTTCACGCTTTAGGTTATGCTTGCAAGCAATACTTATTGCATGCAATGATATTATCAATATCTATACCAGATATTTCAAGAATTTAA

Protein sequence

>Msa0797040

MNQYHIYEAIGRGRYSTVYKGRKKNTVEYFAIKSVDKSYKNKVLQEVRILHTLDHQNVLNFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVNELACDLVRALQYLHSNGIIYCDLKPSNILLDENGRTKQLCDFGLARRLKEISKVPSSSLPQAKRGTPSYMAPELFDDGGVHSYASDFWALGCVLYECYAGRPPFVGRELTQLVKSIIPDPTPPLPGNPSPPFVNLINSLLVKDPAERIQWHELCGHAFWKTKFTVVSLPPQPAFDDMTELHAKQCLSERNGDKSSHNRTPPKYREKDVKGARGIETPTRATPNGHKTQTKGSARTLEAKQKDPSIIKKGLNLLRMSRIAKSNLQKENEKENYRRPLPNGSEKDADVKIENTDMELDFNENSEEDALDETDGSEHTPSVPNEKMESNFQNQGKADDTENDIRRLDTPSVTTPASDDSRSFVHESTPDRSDISAISPSVSPLVKKQRLKDDLGSGLDSDSSRSSNDISHVIWHPSDLSVRPVIPSRKVDKGSEVIPSLPFEVLQAPEFVKMPKEQLEALQNRIIAILNGSTSIGEKQNVVRYLETLSSNADAANILTNGPIMLILVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLASSGILGSLMDGLRDRQEKVRRFSMAALGELLFYISTQSADSRDNTPLESPSKDNRTVHGWQVPNSLISLVSSILRKGEDDITQLAAGKLESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNTAMLGSHMITNVGRYLIQLAEDKNLIPSLLALFEQGSEVLKGKALVFVAFLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLDAFLHIVASTISGLLDIITGDIQQMMGGRRHGHISSLTSRSAPKSNIHLFPVVLHLLESSAFNHKVVTLPVLRQLANLIKLVEAPFQGRDDFQITLLRILESLTEESSVILANPDIFLREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPVEEEQRLNDLKFVSITHFIPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDMSNANVNNVKLCLALASAPEMESKLLSQLKVVRRVGNFLEFVCAKGMEELLEPTLGLCRAFLARSVSCTKGFSYTTEPTLLGDCPEVSGAVDSQQCIRDIADFGSNVGVFLELSGETSVADIASQCVVLLLKAAPREATTGLLTNLPKVIVILESWSKDTPHLTVQRMLHALGYACKQYLLHAMILSISIPDISRI*