AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0798560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0798560 MtrunA17_Chr5g0403361 96.049 405 16 0 1 405 241 645 0.0 808
Msa0798560 MtrunA17_Chr5g0403371 76.371 237 10 1 405 595 185 421 1.96e-111 346
Msa0798560 MtrunA17_Chr8g0373711 42.701 274 90 7 382 595 151 417 2.49e-50 183
Msa0798560 MtrunA17_Chr5g0418011 47.581 124 58 2 472 594 13 130 8.48e-25 105
Msa0798560 MtrunA17_Chr5g0403381 42.636 129 71 2 467 595 334 459 4.33e-24 107
Msa0798560 MtrunA17_Chr1g0154511 42.975 121 61 3 477 595 332 446 2.16e-21 98.6
Msa0798560 MtrunA17_Chr8g0368871 28.251 223 154 4 170 391 5 222 6.55e-21 92.0
Msa0798560 MtrunA17_Chr8g0368891 28.767 219 150 4 170 387 446 659 9.28e-21 96.7
Msa0798560 MtrunA17_Chr5g0439334 42.975 121 66 2 476 594 342 461 3.53e-20 94.7
Msa0798560 MtrunA17_Chr3g0119351 42.149 121 63 4 476 594 367 482 4.59e-20 94.4
Msa0798560 MtrunA17_Chr3g0093791 23.913 230 171 1 147 376 312 537 6.55e-16 81.6
Msa0798560 MtrunA17_Chr6g0479541 25.063 395 227 10 10 368 228 589 1.45e-15 80.1
Msa0798560 MtrunA17_Chr6g0479541 26.214 206 144 3 170 373 290 489 2.62e-11 66.6
Msa0798560 MtrunA17_Chr5g0413071 37.692 130 69 4 474 595 293 418 9.59e-15 77.4
Msa0798560 MtrunA17_Chr7g0225871 35.156 128 71 5 478 594 44 170 1.80e-14 75.5
Msa0798560 MtrunA17_Chr1g0210801 29.630 135 95 0 252 386 245 379 2.25e-14 76.3
Msa0798560 MtrunA17_Chr1g0210801 24.457 184 135 2 185 368 217 396 2.76e-13 72.8
Msa0798560 MtrunA17_Chr6g0481431 25.446 224 162 3 168 391 3 221 2.67e-14 73.2
Msa0798560 MtrunA17_Chr5g0439631 36.667 150 77 5 454 595 288 427 2.88e-14 75.9
Msa0798560 MtrunA17_Chr3g0136851 26.667 255 174 3 165 417 400 643 2.92e-14 76.6
Msa0798560 MtrunA17_Chr3g0136851 25.806 217 155 2 170 385 230 441 4.05e-14 75.9
Msa0798560 MtrunA17_Chr3g0136851 24.138 232 165 3 145 373 101 324 9.23e-13 71.6
Msa0798560 MtrunA17_Chr3g0136851 26.316 209 139 4 171 376 832 1028 6.17e-12 68.9
Msa0798560 MtrunA17_Chr5g0439701 37.879 132 66 4 472 595 296 419 3.48e-14 75.9
Msa0798560 MtrunA17_Chr6g0481751 27.344 128 93 0 249 376 227 354 3.69e-14 75.1
Msa0798560 MtrunA17_Chr6g0481751 24.766 214 153 3 170 381 257 464 1.03e-11 67.4
Msa0798560 MtrunA17_Chr1g0182521 28.994 169 111 3 216 379 453 617 6.10e-14 75.1
Msa0798560 MtrunA17_Chr1g0182521 25.854 205 132 2 177 373 239 431 6.89e-14 75.1
Msa0798560 MtrunA17_Chr1g0170071 29.050 179 121 4 197 374 570 743 6.53e-14 75.1
Msa0798560 MtrunA17_Chr7g0231941 22.174 230 141 5 145 373 88 280 6.93e-14 75.1
Msa0798560 MtrunA17_Chr6g0471201 24.074 216 157 2 164 376 297 508 7.22e-14 74.3
Msa0798560 MtrunA17_Chr6g0471531 32.026 153 100 2 224 376 373 521 8.77e-14 74.3
Msa0798560 MtrunA17_Chr6g0483431 26.627 169 120 1 205 373 236 400 1.14e-13 73.6
Msa0798560 MtrunA17_Chr6g0478551 29.000 200 138 2 174 373 301 496 1.21e-13 73.9
Msa0798560 MtrunA17_Chr6g0478551 27.273 143 104 0 249 391 232 374 2.32e-11 66.6
Msa0798560 MtrunA17_Chr6g0478551 31.148 122 84 0 252 373 270 391 4.45e-11 65.5
Msa0798560 MtrunA17_Chr5g0439561 36.709 158 81 6 449 595 296 445 1.50e-13 73.6
Msa0798560 MtrunA17_Chr6g0481621 27.711 166 117 1 220 382 368 533 1.81e-13 73.2
Msa0798560 MtrunA17_Chr6g0481621 27.407 135 98 0 252 386 263 397 1.32e-12 70.5
Msa0798560 MtrunA17_Chr6g0481621 27.869 122 88 0 252 373 298 419 6.58e-11 65.1
Msa0798560 MtrunA17_Chr7g0218641 29.282 181 123 3 211 391 340 515 1.85e-13 73.2
Msa0798560 MtrunA17_Chr8g0391651 23.364 214 154 2 168 378 480 686 1.98e-13 73.6
Msa0798560 MtrunA17_Chr8g0391651 23.445 209 156 1 170 378 307 511 6.15e-12 68.6
Msa0798560 MtrunA17_Chr5g0439801 39.394 132 62 5 472 595 249 370 2.20e-13 73.2
Msa0798560 MtrunA17_Chr6g0473341 27.869 122 88 0 252 373 270 391 2.25e-13 72.8
Msa0798560 MtrunA17_Chr8g0392911 28.169 213 118 5 188 369 317 525 2.33e-13 73.2
Msa0798560 MtrunA17_Chr8g0392911 32.203 118 80 0 252 369 268 385 4.83e-11 65.9
Msa0798560 MtrunA17_Chr6g0471481 27.966 118 85 0 252 369 96 213 2.35e-13 71.2
Msa0798560 MtrunA17_Chr8g0375231 33.036 112 75 0 255 366 225 336 2.85e-13 73.2
Msa0798560 MtrunA17_Chr6g0473241 27.869 122 88 0 252 373 270 391 3.01e-13 72.4
Msa0798560 MtrunA17_Chr8g0393001 21.028 214 166 1 133 346 58 268 3.12e-13 72.4
Msa0798560 MtrunA17_Chr3g0133151 23.625 309 189 7 111 376 24 328 3.22e-13 72.4
Msa0798560 MtrunA17_Chr2g0284291 24.080 299 204 8 78 373 130 408 3.34e-13 72.8
Msa0798560 MtrunA17_Chr1g0176791 30.000 130 90 1 245 373 864 993 3.52e-13 72.8
Msa0798560 MtrunA17_Chr1g0176791 23.013 239 179 3 150 387 176 410 5.86e-13 72.4
Msa0798560 MtrunA17_Chr1g0176791 23.096 394 263 9 3 373 512 888 5.08e-11 65.9
Msa0798560 MtrunA17_Chr2g0331911 23.793 290 189 2 127 384 77 366 3.56e-13 72.4
Msa0798560 MtrunA17_Chr4g0048611 24.567 289 163 5 252 485 331 619 3.70e-13 72.8
Msa0798560 MtrunA17_Chr6g0481981 22.083 240 156 2 174 382 176 415 4.29e-13 71.6
Msa0798560 MtrunA17_Chr2g0296811 26.289 194 104 4 215 373 15 204 4.60e-13 68.9
Msa0798560 MtrunA17_Chr7g0276351 25.847 236 159 4 145 373 45 271 4.68e-13 71.6
Msa0798560 MtrunA17_Chr1g0171281 28.676 136 97 0 252 387 236 371 4.83e-13 72.0
Msa0798560 MtrunA17_Chr3g0091741 28.962 183 114 4 223 399 101 273 5.12e-13 72.0
Msa0798560 MtrunA17_Chr6g0482611 22.535 284 199 4 107 373 88 367 5.19e-13 72.0
Msa0798560 MtrunA17_Chr6g0482611 25.000 200 139 3 211 407 349 540 5.14e-12 68.6
Msa0798560 MtrunA17_Chr3g0143411 21.759 216 164 1 161 376 129 339 5.20e-13 71.6
Msa0798560 MtrunA17_Chr2g0282801 29.600 125 88 0 252 376 194 318 7.61e-13 71.2
Msa0798560 MtrunA17_Chr6g0482991 30.469 128 89 0 249 376 21 148 7.87e-13 67.4
Msa0798560 MtrunA17_Chr6g0482991 27.692 130 94 0 249 378 56 185 2.04e-12 66.2
Msa0798560 MtrunA17_Chr6g0478271 29.008 131 93 0 252 382 33 163 8.09e-13 67.8
Msa0798560 MtrunA17_Chr6g0482541 22.490 249 161 3 174 391 111 358 9.17e-13 70.5
Msa0798560 MtrunA17_Chr6g0482541 26.866 134 96 1 252 383 80 213 1.21e-11 67.0
Msa0798560 MtrunA17_Chr5g0412071 27.160 162 110 3 249 408 435 590 1.06e-12 71.2
Msa0798560 MtrunA17_Chr5g0412071 29.008 131 93 0 252 382 368 498 3.12e-11 66.6
Msa0798560 MtrunA17_Chr5g0412071 21.429 350 232 9 155 477 83 416 5.05e-11 65.9
Msa0798560 MtrunA17_Chr2g0297211 29.747 158 99 2 221 373 363 513 1.15e-12 71.2
Msa0798560 MtrunA17_Chr5g0396041 22.727 198 149 1 170 367 401 594 1.47e-12 71.2
Msa0798560 MtrunA17_Chr5g0396041 25.389 193 140 2 170 362 436 624 1.57e-12 70.9
Msa0798560 MtrunA17_Chr5g0396041 29.600 125 88 0 252 376 374 498 1.26e-11 68.2
Msa0798560 MtrunA17_Chr5g0434451 23.887 247 177 3 144 387 196 434 1.79e-12 70.1
Msa0798560 MtrunA17_Chr4g0009441 21.495 214 163 2 161 373 84 293 1.82e-12 69.7
Msa0798560 MtrunA17_Chr8g0340721 34.615 130 73 4 474 595 341 466 1.85e-12 70.5
Msa0798560 MtrunA17_Chr1g0160881 26.957 230 159 2 170 399 307 527 1.94e-12 70.1
Msa0798560 MtrunA17_Chr4g0019851 26.531 147 104 1 252 394 302 448 1.96e-12 70.1
Msa0798560 MtrunA17_Chr6g0478291 29.771 131 92 0 252 382 382 512 1.99e-12 70.1
Msa0798560 MtrunA17_Chr6g0482571 23.585 212 117 3 205 378 195 399 2.06e-12 69.3
Msa0798560 MtrunA17_Chr6g0482571 29.508 122 86 0 252 373 98 219 1.85e-11 66.2
Msa0798560 MtrunA17_Chr6g0472611 30.952 168 111 3 224 391 357 519 2.10e-12 70.1
Msa0798560 MtrunA17_Chr6g0482561 26.984 189 127 3 205 390 177 357 2.26e-12 68.9
Msa0798560 MtrunA17_Chr3g0102971 26.374 182 130 1 201 382 81 258 2.52e-12 67.8
Msa0798560 MtrunA17_Chr4g0060641 23.000 200 150 2 174 373 110 305 2.69e-12 70.1
Msa0798560 MtrunA17_Chr7g0238461 26.087 184 131 2 196 378 141 320 3.09e-12 69.3
Msa0798560 MtrunA17_Chr6g0482921 26.404 178 127 1 205 382 75 248 3.10e-12 67.8
Msa0798560 MtrunA17_Chr6g0481991 24.638 207 148 2 174 378 302 502 3.23e-12 69.3
Msa0798560 MtrunA17_Chr2g0299301 31.977 172 100 5 435 594 1005 1171 3.85e-12 69.7
Msa0798560 MtrunA17_Chr4g0042361 36.923 130 64 6 477 594 527 650 4.04e-12 69.3
Msa0798560 MtrunA17_Chr8g0359551 29.114 158 108 2 216 373 358 511 4.18e-12 69.3
Msa0798560 MtrunA17_Chr6g0471871 29.762 168 113 2 224 391 362 524 4.32e-12 68.9
Msa0798560 MtrunA17_Chr6g0471871 29.508 122 86 0 252 373 281 402 7.24e-11 65.1
Msa0798560 MtrunA17_Chr4g0059641 28.244 131 94 0 252 382 153 283 4.99e-12 67.4
Msa0798560 MtrunA17_Chr6g0473381 26.108 203 142 4 189 391 145 339 6.45e-12 67.4
Msa0798560 MtrunA17_Chr5g0410901 20.580 379 250 8 10 378 318 655 6.75e-12 68.6
Msa0798560 MtrunA17_Chr6g0478251 28.846 104 74 0 249 352 34 137 7.12e-12 63.5
Msa0798560 MtrunA17_Chr6g0482901 31.200 125 86 0 252 376 386 510 8.08e-12 68.2
Msa0798560 MtrunA17_Chr2g0296401 22.000 300 204 5 116 393 62 353 9.65e-12 68.2
Msa0798560 MtrunA17_Chr6g0482821 21.667 240 157 2 174 382 275 514 1.10e-11 67.8
Msa0798560 MtrunA17_Chr6g0482821 27.869 122 88 0 252 373 244 365 3.08e-11 66.2
Msa0798560 MtrunA17_Chr6g0482601 21.951 246 160 3 174 388 184 428 1.28e-11 67.0
Msa0798560 MtrunA17_Chr6g0482601 27.826 115 83 0 252 366 153 267 3.31e-11 65.9
Msa0798560 MtrunA17_Chr2g0297991 27.879 165 115 2 212 376 415 575 1.29e-11 67.8
Msa0798560 MtrunA17_Chr6g0482581 28.571 105 75 0 249 353 34 138 1.33e-11 62.8
Msa0798560 MtrunA17_Chr5g0446031 24.020 204 151 2 170 373 442 641 1.42e-11 67.8
Msa0798560 MtrunA17_Chr5g0446031 20.866 254 195 3 126 378 84 332 2.45e-11 67.0
Msa0798560 MtrunA17_Chr1g0168761 22.541 244 158 2 174 386 258 501 1.44e-11 67.4
Msa0798560 MtrunA17_Chr3g0079211 29.032 124 87 1 252 374 318 441 1.46e-11 67.0
Msa0798560 MtrunA17_Chr4g0033981 25.121 207 151 2 170 376 352 554 1.47e-11 67.4
Msa0798560 MtrunA17_Chr1g0149711 36.585 123 60 5 485 595 84 200 1.51e-11 66.6
Msa0798560 MtrunA17_Chr1g0162281 24.651 215 157 3 162 376 182 391 1.54e-11 67.4
Msa0798560 MtrunA17_Chr6g0476151 24.878 205 150 2 174 378 269 469 1.89e-11 67.0
Msa0798560 MtrunA17_Chr6g0481601 28.369 141 97 2 205 345 360 496 1.90e-11 66.6
Msa0798560 MtrunA17_Chr6g0481601 28.319 113 80 1 241 353 218 329 1.97e-11 66.6
Msa0798560 MtrunA17_Chr6g0481601 28.571 126 84 1 275 400 321 440 6.41e-11 65.1
Msa0798560 MtrunA17_Chr8g0369641 23.333 210 155 2 168 376 554 758 1.91e-11 67.4
Msa0798560 MtrunA17_Chr6g0482971 27.749 191 128 4 221 409 343 525 1.94e-11 67.0
Msa0798560 MtrunA17_Chr4g0064511 33.889 180 88 6 436 602 173 334 2.01e-11 66.6
Msa0798560 MtrunA17_Chr6g0449581 24.413 213 150 5 163 369 247 454 2.23e-11 67.0
Msa0798560 MtrunA17_Chr7g0217921 22.182 275 181 8 127 376 51 317 2.48e-11 66.6
Msa0798560 MtrunA17_Chr6g0471491 29.508 122 86 0 264 385 73 194 2.55e-11 63.9
Msa0798560 MtrunA17_Chr6g0473331 28.689 122 87 0 252 373 308 429 2.61e-11 66.6
Msa0798560 MtrunA17_Chr6g0478241 30.928 97 67 0 271 367 12 108 2.95e-11 61.2
Msa0798560 MtrunA17_Chr3g0135921 32.576 132 67 5 474 594 316 436 3.29e-11 66.2
Msa0798560 MtrunA17_Chr2g0288121 37.302 126 61 5 483 595 35 155 3.54e-11 65.1
Msa0798560 MtrunA17_Chr8g0389011 33.594 128 68 5 478 594 486 607 3.62e-11 66.2
Msa0798560 MtrunA17_Chr5g0442231 21.481 270 193 3 109 378 44 294 3.72e-11 66.2
Msa0798560 MtrunA17_Chr6g0478261 28.931 159 109 2 224 382 355 509 3.76e-11 65.9
Msa0798560 MtrunA17_Chr6g0478261 29.508 122 86 0 252 373 414 535 7.36e-11 65.1
Msa0798560 MtrunA17_Chr2g0312191 27.778 126 91 0 251 376 379 504 3.77e-11 65.9
Msa0798560 MtrunA17_Chr8g0389031 33.594 128 68 5 478 594 250 371 3.99e-11 65.9
Msa0798560 MtrunA17_Chr5g0415451 33.824 136 72 5 475 595 412 544 4.22e-11 65.9
Msa0798560 MtrunA17_Chr1g0150761 35.156 128 64 6 478 594 414 533 4.76e-11 65.9
Msa0798560 MtrunA17_Chr4g0050481 25.641 234 163 6 141 368 68 296 4.84e-11 65.5
Msa0798560 MtrunA17_Chr6g0473501 27.049 122 89 0 252 373 165 286 4.94e-11 65.1
Msa0798560 MtrunA17_Chr6g0473471 27.049 122 89 0 252 373 165 286 5.11e-11 65.1
Msa0798560 MtrunA17_Chr6g0478001 28.571 119 85 0 249 367 420 538 5.60e-11 65.5
Msa0798560 MtrunA17_Chr1g0168811 23.645 203 145 2 174 373 356 551 5.95e-11 65.5
Msa0798560 MtrunA17_Chr6g0473261 23.153 203 152 1 174 376 314 512 6.03e-11 65.5
Msa0798560 MtrunA17_Chr4g0058401 23.629 237 172 5 130 362 217 448 6.40e-11 65.5
Msa0798560 MtrunA17_Chr6g0482651 29.752 121 85 0 249 369 264 384 6.61e-11 65.1
Msa0798560 MtrunA17_Chr6g0478691 25.610 164 85 1 252 378 456 619 6.67e-11 65.1
Msa0798560 MtrunA17_Chr6g0473491 26.230 122 90 0 252 373 270 391 6.70e-11 65.1
Msa0798560 MtrunA17_Chr4g0060341 22.936 218 158 2 168 382 301 511 6.73e-11 65.1
Msa0798560 MtrunA17_Chr6g0473251 21.293 263 144 4 174 373 266 528 6.84e-11 65.1
Msa0798560 MtrunA17_Chr6g0482751 29.771 131 92 0 252 382 380 510 7.12e-11 65.1
Msa0798560 MtrunA17_Chr6g0473441 26.230 122 90 0 252 373 270 391 7.56e-11 65.1
Msa0798560 MtrunA17_Chr6g0477511 25.735 136 100 1 241 376 242 376 7.87e-11 65.1
Msa0798560 MtrunA17_Chr6g0473461 23.529 204 117 3 205 373 2 201 8.34e-11 62.0
Msa0798560 MtrunA17_Chr8g0381361 28.000 125 90 0 252 376 362 486 8.35e-11 64.7
Msa0798560 MtrunA17_Chr8g0353181 23.643 258 169 7 155 395 58 304 8.45e-11 64.7
Msa0798560 MtrunA17_Chr7g0233421 24.378 201 143 4 177 376 220 412 8.67e-11 65.1
Msa0798560 MtrunA17_Chr7g0214351 23.853 218 161 3 170 386 306 519 9.02e-11 65.1
Msa0798560 MtrunA17_Chr8g0376131 34.615 130 68 5 477 594 39 163 9.19e-11 64.3
Msa0798560 MtrunA17_Chr6g0481971 28.571 105 75 0 249 353 196 300 9.39e-11 64.7
Msa0798560 MtrunA17_Chr6g0488761 33.594 128 66 5 478 594 474 593 9.87e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0798560 AT5G66631.1 56.763 414 163 4 1 405 241 647 1.42e-166 490
Msa0798560 AT5G66631.1 22.727 220 161 2 169 388 99 309 3.85e-11 66.6
Msa0798560 AT2G33580.1 36.782 174 89 5 425 594 314 470 1.88e-20 96.3
Msa0798560 AT1G18900.4 23.950 238 177 1 147 384 336 569 7.97e-18 88.2
Msa0798560 AT1G18900.2 23.950 238 177 1 147 384 336 569 7.97e-18 88.2
Msa0798560 AT1G18900.1 23.950 238 177 1 147 384 336 569 7.97e-18 88.2
Msa0798560 AT1G18900.3 23.950 238 177 1 147 384 336 569 8.12e-18 88.2
Msa0798560 AT3G18110.1 26.577 222 160 1 170 391 362 580 1.28e-17 87.8
Msa0798560 AT3G18110.1 27.684 177 123 3 201 376 288 460 9.96e-13 72.0
Msa0798560 AT1G74750.2 22.414 290 203 2 115 386 281 566 5.32e-17 85.5
Msa0798560 AT1G74750.1 22.414 290 203 2 115 386 281 566 5.32e-17 85.5
Msa0798560 AT1G74750.4 22.414 290 203 2 115 386 281 566 5.32e-17 85.5
Msa0798560 AT1G74750.3 22.414 290 203 2 115 386 281 566 5.32e-17 85.5
Msa0798560 AT5G65560.1 24.151 265 171 6 110 373 72 307 3.61e-16 82.8
Msa0798560 AT5G65560.2 24.151 265 171 6 110 373 72 307 3.61e-16 82.8
Msa0798560 AT5G65560.3 24.151 265 171 6 110 373 72 307 3.61e-16 82.8
Msa0798560 AT5G18390.1 24.370 238 176 2 132 368 67 301 4.93e-16 81.3
Msa0798560 AT5G06400.1 26.800 250 168 6 133 376 146 386 5.24e-16 82.4
Msa0798560 AT2G31400.2 24.490 196 144 1 173 368 372 563 2.10e-15 80.5
Msa0798560 AT3G22670.1 21.404 285 190 3 128 378 118 402 2.18e-15 79.7
Msa0798560 AT2G31400.1 24.490 196 144 1 173 368 372 563 2.37e-15 80.1
Msa0798560 AT5G39710.1 27.717 184 129 2 170 353 270 449 4.59e-15 79.3
Msa0798560 AT5G39710.1 22.596 208 153 2 168 373 338 539 1.27e-11 68.2
Msa0798560 AT5G39710.1 22.539 386 258 9 10 373 208 574 6.37e-11 65.9
Msa0798560 AT4G31850.1 25.000 432 278 12 3 412 219 626 2.92e-14 77.0
Msa0798560 AT1G12620.1 27.638 199 136 4 170 366 207 399 2.99e-14 76.3
Msa0798560 AT3G22470.2 29.000 200 138 2 170 369 205 400 3.65e-14 75.9
Msa0798560 AT3G62470.1 23.451 226 164 5 144 367 163 381 3.75e-14 75.9
Msa0798560 AT5G14820.1 23.451 226 164 5 144 367 162 380 3.88e-14 75.9
Msa0798560 AT1G12775.1 27.723 202 138 4 170 369 223 418 4.57e-14 75.9
Msa0798560 AT2G32630.1 24.034 233 166 3 153 382 203 427 5.20e-14 75.5
Msa0798560 AT3G22470.1 29.000 200 138 2 170 369 205 400 5.20e-14 75.5
Msa0798560 AT3G22470.1 29.508 122 86 0 252 373 318 439 8.65e-13 71.6
Msa0798560 AT3G21630.1 33.728 169 85 7 442 595 271 427 7.75e-14 75.1
Msa0798560 AT3G62540.1 23.451 226 164 5 144 367 163 381 8.66e-14 74.7
Msa0798560 AT5G61990.1 33.636 110 73 0 252 361 630 739 9.42e-14 75.1
Msa0798560 AT5G61990.1 24.311 399 254 14 8 376 593 973 2.08e-13 73.9
Msa0798560 AT2G23770.1 38.983 118 64 3 477 594 343 452 1.18e-13 74.3
Msa0798560 AT3G09060.2 21.774 248 191 1 141 388 9 253 1.32e-13 74.3
Msa0798560 AT3G09060.1 21.774 248 191 1 141 388 9 253 1.32e-13 74.3
Msa0798560 AT4G01400.1 24.893 233 164 2 145 373 54 279 1.61e-13 73.6
Msa0798560 AT4G01400.1 21.757 239 173 5 133 368 117 344 6.98e-11 65.5
Msa0798560 AT1G62930.1 28.571 210 134 4 170 373 215 414 1.72e-13 73.9
Msa0798560 AT1G62930.1 27.481 131 95 0 252 382 433 563 9.64e-13 71.6
Msa0798560 AT1G74850.1 25.926 216 149 3 174 385 210 418 1.81e-13 74.3
Msa0798560 AT4G20140.1 40.157 127 62 4 483 595 944 1070 2.09e-13 74.3
Msa0798560 AT3G16010.1 27.200 250 174 4 127 373 78 322 2.66e-13 73.6
Msa0798560 AT3G16010.1 25.157 159 115 1 216 374 450 604 3.34e-11 66.6
Msa0798560 AT2G01390.1 20.755 212 164 1 140 351 87 294 2.78e-13 73.2
Msa0798560 AT5G38730.1 23.438 256 168 7 141 374 44 293 3.21e-13 73.2
Msa0798560 AT5G02860.1 21.825 252 154 4 170 385 203 447 3.33e-13 73.2
Msa0798560 AT5G02860.1 21.121 232 176 3 148 376 249 476 1.89e-11 67.8
Msa0798560 AT5G02860.4 21.825 252 154 4 170 385 203 447 3.33e-13 73.2
Msa0798560 AT5G02860.4 21.121 232 176 3 148 376 249 476 1.89e-11 67.8
Msa0798560 AT5G02860.2 21.825 252 154 4 170 385 203 447 3.33e-13 73.2
Msa0798560 AT5G02860.2 21.121 232 176 3 148 376 249 476 1.89e-11 67.8
Msa0798560 AT5G02860.5 21.825 252 154 4 170 385 203 447 3.33e-13 73.2
Msa0798560 AT5G02860.5 21.121 232 176 3 148 376 249 476 1.89e-11 67.8
Msa0798560 AT5G02860.3 21.825 252 154 4 170 385 203 447 3.33e-13 73.2
Msa0798560 AT5G02860.3 21.121 232 176 3 148 376 249 476 1.89e-11 67.8
Msa0798560 AT1G06710.15 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.18 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.17 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.14 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.16 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.10 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G06710.11 23.278 421 282 11 10 400 305 714 4.36e-13 73.2
Msa0798560 AT1G62590.2 28.000 200 140 2 170 369 220 415 4.44e-13 72.8
Msa0798560 AT1G62590.1 28.000 200 140 2 170 369 220 415 4.44e-13 72.8
Msa0798560 AT2G17140.1 23.904 251 177 5 144 386 5 249 5.04e-13 72.8
Msa0798560 AT2G17140.1 21.751 377 253 9 4 373 109 450 2.78e-12 70.5
Msa0798560 AT2G17140.2 23.904 251 177 5 144 386 5 249 5.04e-13 72.8
Msa0798560 AT2G17140.2 21.751 377 253 9 4 373 109 450 2.78e-12 70.5
Msa0798560 AT1G06710.7 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.1 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.9 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.4 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.13 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.3 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.8 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.2 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.19 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.5 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.6 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G06710.12 23.278 421 282 11 10 400 305 714 5.57e-13 72.8
Msa0798560 AT1G62670.2 24.925 333 214 8 170 498 216 516 5.78e-13 72.4
Msa0798560 AT1G62670.2 25.954 131 97 0 252 382 434 564 3.06e-12 70.1
Msa0798560 AT1G62670.1 24.925 333 214 8 170 498 216 516 5.78e-13 72.4
Msa0798560 AT1G62670.1 25.954 131 97 0 252 382 434 564 3.06e-12 70.1
Msa0798560 AT3G16890.2 23.849 239 176 4 139 376 296 529 7.05e-13 71.6
Msa0798560 AT3G16890.2 23.041 217 163 2 170 386 291 503 3.04e-11 66.6
Msa0798560 AT1G12700.1 28.462 130 93 0 249 378 333 462 7.22e-13 72.0
Msa0798560 AT1G12700.1 26.437 174 118 2 212 382 370 536 7.36e-12 68.6
Msa0798560 AT3G16890.1 23.849 239 176 4 139 376 425 658 7.31e-13 72.0
Msa0798560 AT3G16890.1 23.041 217 163 2 170 386 420 632 2.02e-11 67.4
Msa0798560 AT1G30290.2 26.147 218 148 5 181 395 353 560 7.46e-13 72.0
Msa0798560 AT1G12700.3 28.462 130 93 0 249 378 349 478 7.65e-13 72.0
Msa0798560 AT1G12700.3 26.437 174 118 2 212 382 386 552 7.98e-12 68.6
Msa0798560 AT1G12700.2 28.462 130 93 0 249 378 349 478 7.65e-13 72.0
Msa0798560 AT1G12700.2 26.437 174 118 2 212 382 386 552 7.98e-12 68.6
Msa0798560 AT1G30290.1 26.147 218 148 5 181 395 353 560 8.25e-13 72.0
Msa0798560 AT2G06000.1 25.243 206 145 3 173 376 101 299 8.36e-13 71.6
Msa0798560 AT2G06000.1 27.869 122 88 0 252 373 280 401 1.45e-11 67.8
Msa0798560 AT2G06000.2 25.243 206 145 3 173 376 101 299 8.36e-13 71.6
Msa0798560 AT2G06000.2 27.869 122 88 0 252 373 280 401 1.45e-11 67.8
Msa0798560 AT1G55630.1 21.759 216 162 2 164 376 243 454 1.05e-12 71.2
Msa0798560 AT5G61400.1 24.051 395 227 13 13 369 170 529 1.12e-12 71.2
Msa0798560 AT5G16420.1 23.297 279 163 5 140 373 43 315 1.16e-12 71.2
Msa0798560 AT5G16420.3 23.297 279 163 5 140 373 43 315 1.16e-12 71.2
Msa0798560 AT5G16420.4 23.297 279 163 5 140 373 43 315 1.16e-12 71.2
Msa0798560 AT5G16420.2 23.297 279 163 5 140 373 43 315 1.16e-12 71.2
Msa0798560 AT1G77340.1 23.318 223 155 4 155 376 40 247 1.19e-12 70.5
Msa0798560 AT3G53700.1 23.611 216 161 1 176 391 436 647 1.30e-12 71.2
Msa0798560 AT3G53700.1 27.869 122 88 0 252 373 333 454 7.47e-11 65.9
Msa0798560 AT1G63130.1 27.755 245 152 7 138 373 187 415 1.34e-12 71.2
Msa0798560 AT1G63130.1 24.277 173 123 2 212 382 398 564 2.86e-12 70.1
Msa0798560 AT1G63130.2 27.755 245 152 7 138 373 187 415 1.34e-12 71.2
Msa0798560 AT1G63130.2 24.277 173 123 2 212 382 398 564 2.86e-12 70.1
Msa0798560 AT3G25210.1 22.358 246 161 3 149 376 82 315 2.68e-12 69.3
Msa0798560 AT1G62910.1 28.571 210 134 4 170 373 218 417 2.97e-12 70.1
Msa0798560 AT1G62910.1 22.927 205 154 2 170 374 113 313 9.35e-11 65.1
Msa0798560 AT1G79490.1 28.824 170 113 2 212 379 315 478 3.10e-12 70.1
Msa0798560 AT1G05670.1 24.155 207 153 2 170 376 486 688 3.16e-12 70.1
Msa0798560 AT1G05670.1 23.950 238 161 4 250 486 352 570 7.38e-12 68.9
Msa0798560 AT1G05670.1 28.346 127 91 0 251 377 318 444 3.52e-11 66.6
Msa0798560 AT1G05670.2 24.155 207 153 2 170 376 486 688 3.16e-12 70.1
Msa0798560 AT1G05670.2 23.950 238 161 4 250 486 352 570 7.38e-12 68.9
Msa0798560 AT1G05670.2 28.346 127 91 0 251 377 318 444 3.52e-11 66.6
Msa0798560 AT1G05670.3 24.155 207 153 2 170 376 486 688 3.16e-12 70.1
Msa0798560 AT1G05670.3 23.950 238 161 4 250 486 352 570 7.38e-12 68.9
Msa0798560 AT1G05670.3 28.346 127 91 0 251 377 318 444 3.52e-11 66.6
Msa0798560 AT1G09820.1 23.938 259 161 5 144 368 194 450 3.27e-12 69.7
Msa0798560 AT1G09820.1 28.030 132 94 1 251 382 403 533 1.14e-11 68.2
Msa0798560 AT1G71060.1 22.093 258 187 4 162 412 115 365 3.92e-12 69.3
Msa0798560 AT1G02060.1 24.464 233 138 6 145 376 71 266 5.36e-12 69.3
Msa0798560 AT1G63330.3 28.000 200 140 2 170 369 145 340 7.33e-12 68.6
Msa0798560 AT1G63330.1 28.000 200 140 2 170 369 145 340 7.33e-12 68.6
Msa0798560 AT1G63330.2 28.000 200 140 2 170 369 145 340 7.33e-12 68.6
Msa0798560 AT1G09900.1 28.814 118 84 0 252 369 207 324 7.64e-12 68.6
Msa0798560 AT1G09900.1 28.931 159 105 4 215 373 143 293 3.34e-11 66.6
Msa0798560 AT1G09680.1 21.212 231 177 3 157 387 223 448 8.29e-12 68.6
Msa0798560 AT1G63400.1 25.000 168 116 4 212 376 402 562 9.79e-12 68.2
Msa0798560 AT1G63400.1 22.941 340 212 10 170 498 220 520 6.63e-11 65.5
Msa0798560 AT2G07020.1 36.296 135 65 7 478 601 407 531 1.33e-11 68.2
Msa0798560 AT5G64320.1 30.709 127 84 1 250 376 253 375 1.77e-11 67.8
Msa0798560 AT5G55840.3 30.657 137 94 1 252 388 406 541 1.85e-11 67.8
Msa0798560 AT5G55840.2 30.657 137 94 1 252 388 446 581 1.97e-11 67.8
Msa0798560 AT5G55840.1 30.657 137 94 1 252 388 446 581 1.97e-11 67.8
Msa0798560 AT5G57250.1 24.464 233 168 4 146 378 182 406 1.98e-11 67.8
Msa0798560 AT4G26800.1 30.508 118 82 0 252 369 86 203 1.98e-11 66.6
Msa0798560 AT1G78940.1 33.594 128 66 4 478 594 365 484 2.31e-11 67.4
Msa0798560 AT5G59900.1 30.328 122 85 0 252 373 475 596 2.59e-11 67.4
Msa0798560 AT5G65820.1 24.215 223 155 5 159 376 131 344 3.05e-11 67.0
Msa0798560 AT5G21222.1 21.778 225 170 3 153 376 474 693 3.22e-11 67.0
Msa0798560 AT5G21222.2 21.778 225 170 3 153 376 474 693 3.22e-11 67.0
Msa0798560 AT5G21222.4 21.778 225 170 3 153 376 474 693 3.22e-11 67.0
Msa0798560 AT5G21222.3 21.778 225 170 3 153 376 474 693 3.22e-11 67.0
Msa0798560 AT4G26800.3 30.508 118 82 0 252 369 156 273 3.23e-11 66.2
Msa0798560 AT1G78940.3 33.594 128 66 4 478 594 436 555 3.49e-11 66.6
Msa0798560 AT4G26800.2 30.508 118 82 0 252 369 231 348 3.54e-11 66.2
Msa0798560 AT1G78940.2 33.594 128 66 4 478 594 436 555 3.71e-11 66.6
Msa0798560 AT5G01110.1 22.886 201 151 2 168 368 228 424 3.74e-11 66.6
Msa0798560 AT5G16640.1 24.581 179 126 3 212 388 328 499 3.99e-11 66.2
Msa0798560 AT1G16760.2 32.031 128 68 4 478 594 438 557 4.14e-11 66.6
Msa0798560 AT1G64580.1 29.134 127 90 0 252 378 292 418 4.40e-11 66.2
Msa0798560 AT1G16760.1 32.031 128 68 4 478 594 438 557 4.70e-11 66.2
Msa0798560 AT1G12300.1 25.000 200 146 2 170 369 223 418 5.13e-11 66.2
Msa0798560 AT5G01110.2 22.886 201 151 2 168 368 256 452 5.30e-11 66.2
Msa0798560 AT1G64583.1 30.370 135 92 1 252 384 214 348 5.36e-11 65.9
Msa0798560 AT1G64583.2 30.370 135 92 1 252 384 189 323 5.46e-11 65.9
Msa0798560 AT1G20300.1 22.857 210 156 3 161 369 136 340 5.76e-11 65.9
Msa0798560 AT1G03560.1 26.531 196 134 3 204 393 321 512 6.30e-11 65.9
Msa0798560 AT3G60050.2 23.148 216 162 1 153 368 127 338 6.45e-11 65.5
Msa0798560 AT3G60050.1 23.148 216 162 1 153 368 127 338 6.45e-11 65.5
Msa0798560 AT1G17540.1 33.566 143 72 6 463 594 386 516 6.61e-11 65.9
Msa0798560 AT5G04810.1 26.220 164 117 2 211 374 590 749 7.09e-11 65.9
Msa0798560 AT5G18475.1 26.400 125 91 1 250 373 233 357 7.26e-11 65.5
Msa0798560 AT1G63320.1 25.758 132 89 1 252 374 19 150 7.45e-11 62.0
Msa0798560 AT1G13040.2 24.645 211 146 5 168 374 283 484 8.83e-11 65.1
Msa0798560 AT1G13040.1 24.645 211 146 5 168 374 283 484 8.83e-11 65.1
Msa0798560 AT5G46580.1 24.783 230 161 4 148 373 159 380 8.91e-11 65.5
Msa0798560 AT5G04810.2 26.220 164 117 2 211 374 590 749 9.13e-11 65.5

Find 124 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAATGTTTGGATATC+TGG 0.170597 5_3:-11304400 None:intergenic
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5_3:+11306311 Msa0798560:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5_3:+11304580 Msa0798560:CDS
AAAGTCAATGATTAACCTTA+TGG 0.297432 5_3:-11304191 None:intergenic
CTGTGTGGAATTTCTTCTGC+TGG 0.310260 5_3:+11304026 Msa0798560:CDS
TTGGCTGGATCCGCGGTCTT+TGG 0.315039 5_3:+11303889 Msa0798560:CDS
GAAGATGGTTGATCAAGTTT+TGG 0.326422 5_3:-11306266 Msa0798570:three_prime_UTR
ATCTTTGAAAACTTCAAATT+CGG 0.332020 5_3:+11306763 Msa0798560:CDS
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5_3:+11306155 Msa0798560:CDS
GTTAATGAGATGCAAGTTGA+TGG 0.346251 5_3:+11303644 Msa0798560:CDS
GTCTATGAGTATGCTGATAA+TGG 0.351035 5_3:+11306713 Msa0798560:CDS
TCACAATGTGATCATGTAGA+TGG 0.351608 5_3:+11303851 Msa0798560:CDS
GCATTAGACCTGAAAATGTT+TGG 0.360031 5_3:-11304408 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5_3:-11306862 Msa0798570:three_prime_UTR
TTCGGTTCTAATTGAAGGTT+TGG 0.375503 5_3:+11303586 Msa0798560:CDS
AACTCTTTGATGGCCGAATC+AGG 0.382129 5_3:-11304610 None:intergenic
AGTAAAATGTTTGATGAAGT+TGG 0.386223 5_3:+11303614 Msa0798560:CDS
CAAGCCAACAATGTATGAAA+TGG 0.386975 5_3:+11306481 Msa0798560:CDS
ACGTACTTTGAAACAGTATT+CGG 0.388885 5_3:+11303568 Msa0798560:CDS
TGGAAATCTTGTGAAACTAA+TGG 0.394475 5_3:+11306655 Msa0798560:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5_3:-11304105 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.403178 5_3:-11304620 None:intergenic
GAAGGATGAAGGATTTCTTA+AGG 0.405813 5_3:+11303709 Msa0798560:CDS
TGCTGGGTTGCTGATCGACC+TGG 0.409148 5_3:+11304043 Msa0798560:CDS
TTCTGGTTCCATACCTGATT+CGG 0.410204 5_3:+11304597 Msa0798560:CDS
AAGAAATTCCACACAGTATC+CGG 0.412127 5_3:-11304019 None:intergenic
CAGTATTCGGTTCTAATTGA+AGG 0.419628 5_3:+11303581 Msa0798560:CDS
ACTTGCAATAACCTTCTATC+AGG 0.422153 5_3:-11304528 None:intergenic
GTCCTTCCACTTGCATTACC+TGG 0.422582 5_3:+11304712 Msa0798560:CDS
TTGTCAGCTAACATTTCAAC+TGG 0.427505 5_3:-11306185 Msa0798570:three_prime_UTR
TTGCATTACCTGGTCATGTA+TGG 0.429367 5_3:+11304722 Msa0798560:CDS
GCCAGACGCGTATCTGTATA+AGG 0.430893 5_3:+11304504 Msa0798560:CDS
ATCGGAATTCCTTCCACACT+TGG 0.431442 5_3:-11304335 None:intergenic
AACAATGATCGAATACTTTG+TGG 0.433378 5_3:+11304256 Msa0798560:CDS
CAACAAGAGCTGCACTGGCT+TGG 0.436660 5_3:+11304551 Msa0798560:CDS
CAAGTCAACAAGAGCTGCAC+TGG 0.438454 5_3:+11304546 Msa0798560:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5_3:+11306739 Msa0798560:CDS
CTGAAAATGTTTGGATATCT+GGG 0.442804 5_3:-11304399 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5_3:-11303761 None:intergenic
GTTTACAAGGCTAATATAGA+TGG 0.444846 5_3:+11306560 Msa0798560:CDS
ACATCCATTTCATACATTGT+TGG 0.446716 5_3:-11306485 Msa0798570:three_prime_UTR
ATTCGGTGGTTTCGCTTACA+TGG 0.454057 5_3:+11306780 Msa0798560:CDS
GATTCACTTAAAACCTTGGC+TGG 0.457260 5_3:+11303874 Msa0798560:CDS
TTGCAGCAGGTGAAGGATGA+AGG 0.460732 5_3:+11303698 Msa0798560:CDS
CATCTTGAAGATCAGAATAG+AGG 0.461168 5_3:+11304147 Msa0798560:CDS
GGAAATCTTGTGAAACTAAT+GGG 0.462411 5_3:+11306656 Msa0798560:CDS
CTTGATCAACCATCTTCAAA+TGG 0.466617 5_3:+11306272 Msa0798560:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5_3:-11303760 None:intergenic
CTGTATAAGGTCCTGATAGA+AGG 0.471205 5_3:+11304517 Msa0798560:CDS
GGTGAGTTTGTTATTGCAGC+AGG 0.472558 5_3:+11303685 Msa0798560:CDS
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5_3:+11304629 Msa0798560:CDS
TCATCTCATCAAGCATGTCC+AGG 0.481198 5_3:-11304360 None:intergenic
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5_3:+11304637 Msa0798560:CDS
TGAAGGATTTCTTAAGGATG+TGG 0.487856 5_3:+11303715 Msa0798560:CDS
TGTGTGGAATTTCTTCTGCT+GGG 0.490658 5_3:+11304027 Msa0798560:CDS
ATAGCCATGGATGTTGCAAT+TGG 0.492998 5_3:+11306818 Msa0798560:CDS
ATTAACCTTATGGTTCTGAA+TGG 0.498328 5_3:-11304181 None:intergenic
ATCAGGACTGCAATTCTGTA+AGG 0.498653 5_3:-11303918 None:intergenic
CAAAGTTCGTGTGGACAACT+AGG 0.503289 5_3:+11303963 Msa0798560:CDS
GATTGGTGAATCAGTTTACA+AGG 0.505991 5_3:+11306547 Msa0798560:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5_3:+11306530 Msa0798560:CDS
ATCAAGCATGTCCAGGGTAT+CGG 0.509612 5_3:-11304353 None:intergenic
ACAATGATCGAATACTTTGT+GGG 0.511017 5_3:+11304257 Msa0798560:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5_3:-11306157 Msa0798570:three_prime_UTR
GTTCTAATTGAAGGTTTGGT+TGG 0.519428 5_3:+11303590 Msa0798560:CDS
ATGGGATTCACTTAAAACCT+TGG 0.520730 5_3:+11303870 Msa0798560:CDS
ACCTTATACAGATACGCGTC+TGG 0.524198 5_3:-11304505 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5_3:-11306822 Msa0798570:three_prime_UTR
GTATGAAATGGATGTGATCA+TGG 0.524330 5_3:+11306493 Msa0798560:CDS
TTTGATGGCCGAATCAGGTA+TGG 0.524348 5_3:-11304605 None:intergenic
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5_3:+11303732 Msa0798560:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5_3:+11304228 Msa0798560:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5_3:+11303731 Msa0798560:CDS
CACAATGTGATCATGTAGAT+GGG 0.532033 5_3:+11303852 Msa0798560:CDS
TTTGAAAACTTCAAATTCGG+TGG 0.535827 5_3:+11306766 Msa0798560:CDS
TCTAGTGCTGATACCTCATC+AGG 0.535975 5_3:-11303935 None:intergenic
GGTTAATGTTCTTAAAAGAG+AGG 0.546099 5_3:-11304314 None:intergenic
TTCTATTGATAGCAGTGATG+AGG 0.550194 5_3:+11303790 Msa0798560:CDS
TTAAGAACATTAACCAAGTG+TGG 0.552345 5_3:+11304322 Msa0798560:CDS
GAACATTAACCAAGTGTGGA+AGG 0.555715 5_3:+11304326 Msa0798560:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5_3:+11304100 Msa0798560:CDS
TTAGTTTCACAAGATTTCCA+TGG 0.557743 5_3:-11306652 Msa0798570:three_prime_UTR
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5_3:-11304104 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5_3:+11304644 Msa0798560:CDS
GATGAGAATGAGGACGAGGG+TGG 0.559684 5_3:+11303812 Msa0798560:CDS
AATTGCAACATCCATGGCTA+TGG 0.562845 5_3:-11306816 Msa0798570:three_prime_UTR
ATCTTGAAGATCAGAATAGA+GGG 0.566478 5_3:+11304148 Msa0798560:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5_3:+11304651 Msa0798560:CDS
TATATATTATGAGTAAATCC+AGG 0.571391 5_3:-11304061 None:intergenic
CAGTGATGAGGATGAGAATG+AGG 0.572880 5_3:+11303802 Msa0798560:CDS
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5_3:-11304645 None:intergenic
TGATGAGGTATCAGCACTAG+AGG 0.580742 5_3:+11303937 Msa0798560:CDS
TCAGAGAATAACCATAGCCA+TGG 0.584198 5_3:+11306805 Msa0798560:CDS
TTTGTTATTGCAGCAGGTGA+AGG 0.584701 5_3:+11303691 Msa0798560:CDS
GTTCGTGTGGACAACTAGGT+TGG 0.586491 5_3:+11303967 Msa0798560:CDS
GACTACCATTCAGAACCATA+AGG 0.587707 5_3:+11304176 Msa0798560:CDS
TAAAACCTTGGCTGGATCCG+CGG 0.590765 5_3:+11303882 Msa0798560:CDS
CTGACAGTCCATACATGACC+AGG 0.594467 5_3:-11304730 None:intergenic
TGGAAGGAATTCCGATACCC+TGG 0.598845 5_3:+11304342 Msa0798560:CDS
CATTGAAAAGAGTTTCTGCA+CGG 0.599322 5_3:-11304461 None:intergenic
TGAGGATGAGAATGAGGACG+AGG 0.601840 5_3:+11303808 Msa0798560:CDS
AAAGACCGCGGATCCAGCCA+AGG 0.608186 5_3:-11303887 None:intergenic
AGGGATCAAAACTGAACGGT+CGG 0.610669 5_3:-11306231 Msa0798570:three_prime_UTR
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5_3:+11303742 Msa0798560:CDS
AACAAACTCACCGTTCGACT+AGG 0.617703 5_3:-11303674 None:intergenic
CATCTCATCAAGCATGTCCA+GGG 0.618669 5_3:-11304359 None:intergenic
ACATGACCAGGTAATGCAAG+TGG 0.620837 5_3:-11304718 None:intergenic
ACAGAATTGCAGTCCTGATG+AGG 0.621540 5_3:+11303922 Msa0798560:CDS
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5_3:-11304674 None:intergenic
TGGAATATTACCTAGTCGAA+CGG 0.624584 5_3:+11303664 Msa0798560:CDS
TAGAGGGTGCAAAGTTCGTG+TGG 0.631089 5_3:+11303954 Msa0798560:CDS
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5_3:-11304714 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5_3:+11304690 Msa0798560:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5_3:+11303938 Msa0798560:CDS
GGTGTGTCTTCTGACAATGA+TGG 0.650870 5_3:+11306677 Msa0798560:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5_3:-11306156 Msa0798570:three_prime_UTR
GAAATGGATGTGATCATGGA+AGG 0.661178 5_3:+11306497 Msa0798560:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5_3:+11306635 Msa0798560:CDS
TTAGGTCACCGGATACTGTG+TGG 0.679276 5_3:+11304011 Msa0798560:CDS
GAGGATGAGAATGAGGACGA+GGG 0.684142 5_3:+11303809 Msa0798560:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5_3:-11306235 Msa0798570:three_prime_UTR
ATAATGGATCACTTGAAGAG+TGG 0.688786 5_3:+11306729 Msa0798560:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5_3:+11304678 Msa0798560:CDS
AAGGCACTAGCCAAAGACCG+CGG 0.751118 5_3:-11303899 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGCATATATATAA+TGG + chr5_3:11305771-11305790 Msa0798560:intron 10.0%
!! ATGCAATTATAATATAATAC+AGG - chr5_3:11305763-11305782 None:intergenic 15.0%
!! TATATATTATGAGTAAATCC+AGG - chr5_3:11304064-11304083 None:intergenic 20.0%
!!! TTCAAATAGTTTAGTTTCAA+AGG + chr5_3:11304786-11304805 Msa0798560:intron 20.0%
!!! TCAAATAGTTTAGTTTCAAA+GGG + chr5_3:11304787-11304806 Msa0798560:intron 20.0%
!!! CTTAAACTGTGATTTATTTT+GGG + chr5_3:11304906-11304925 Msa0798560:intron 20.0%
!!! CTTTTTGTAAGAAAATTAGA+AGG - chr5_3:11305201-11305220 None:intergenic 20.0%
!!! AATTTTCTTACAAAAAGAGT+TGG + chr5_3:11305204-11305223 Msa0798560:intron 20.0%
!!! TTTTTTTTTGTTGGTGTAAA+AGG + chr5_3:11305278-11305297 Msa0798560:intron 20.0%
!!! TTTTTTTTGTTGGTGTAAAA+GGG + chr5_3:11305279-11305298 Msa0798560:intron 20.0%
!! TAAAGATGGTAAGAATAATA+TGG - chr5_3:11305936-11305955 None:intergenic 20.0%
!!! ATCTTTGAAAACTTCAAATT+CGG + chr5_3:11306763-11306782 Msa0798560:CDS 20.0%
! AGTAAAATGTTTGATGAAGT+TGG + chr5_3:11303614-11303633 Msa0798560:CDS 25.0%
! AAAGTCAATGATTAACCTTA+TGG - chr5_3:11304194-11304213 None:intergenic 25.0%
!!! AGGTTAATCATTGACTTTTA+TGG + chr5_3:11304196-11304215 Msa0798560:CDS 25.0%
!!! GGTTAATCATTGACTTTTAT+GGG + chr5_3:11304197-11304216 Msa0798560:CDS 25.0%
!! CTTGATGAGATGATTTTAAA+TGG + chr5_3:11304370-11304389 Msa0798560:CDS 25.0%
! TTTGAAGATATGAAGAATTC+TGG + chr5_3:11304580-11304599 Msa0798560:CDS 25.0%
! CCAAAATAAATCACAGTTTA+AGG - chr5_3:11304908-11304927 None:intergenic 25.0%
!! CCTTAAACTGTGATTTATTT+TGG + chr5_3:11304905-11304924 Msa0798560:intron 25.0%
!!! GAGTTTTGAGAATGTATTAT+TGG + chr5_3:11304967-11304986 Msa0798560:intron 25.0%
! TTGCACAATCATATAATGAA+TGG + chr5_3:11305080-11305099 Msa0798560:intron 25.0%
! TTACACCAACAAAAAAAAAG+AGG - chr5_3:11305277-11305296 None:intergenic 25.0%
! TTAACACCGTTATATTCTTA+TGG + chr5_3:11305382-11305401 Msa0798560:intron 25.0%
! ATTCTGCCATAAGAATATAA+CGG - chr5_3:11305391-11305410 None:intergenic 25.0%
! TATTATTTGTTCCCTATTTC+TGG - chr5_3:11305660-11305679 None:intergenic 25.0%
! TATATTGAAACCTATGTAAC+TGG + chr5_3:11305709-11305728 Msa0798560:intron 25.0%
! TATGGTTTAACGTTTAACAA+AGG - chr5_3:11305803-11305822 None:intergenic 25.0%
! TATGGTATTATAACCCAATT+TGG - chr5_3:11305918-11305937 None:intergenic 25.0%
!! TGTTCAATTGATTCTTTGAA+GGG - chr5_3:11306085-11306104 None:intergenic 25.0%
!! TTGTTCAATTGATTCTTTGA+AGG - chr5_3:11306086-11306105 None:intergenic 25.0%
! TCAAAGAATCAATTGAACAA+AGG + chr5_3:11306086-11306105 Msa0798560:intron 25.0%
! AGTATCTTATTACTTATGTG+TGG + chr5_3:11306114-11306133 Msa0798560:intron 25.0%
!! ACGTACTTTGAAACAGTATT+CGG + chr5_3:11303568-11303587 Msa0798560:CDS 30.0%
ATGTGGATGAATTGTTTGAA+GGG + chr5_3:11303732-11303751 Msa0798560:CDS 30.0%
! GCAAGATACTTAGAAGTTTT+AGG + chr5_3:11303993-11304012 Msa0798560:CDS 30.0%
ATCTTGAAGATCAGAATAGA+GGG + chr5_3:11304148-11304167 Msa0798560:CDS 30.0%
!! ATTAACCTTATGGTTCTGAA+TGG - chr5_3:11304184-11304203 None:intergenic 30.0%
AACAATGATCGAATACTTTG+TGG + chr5_3:11304256-11304275 Msa0798560:CDS 30.0%
ACAATGATCGAATACTTTGT+GGG + chr5_3:11304257-11304276 Msa0798560:CDS 30.0%
GGTTAATGTTCTTAAAAGAG+AGG - chr5_3:11304317-11304336 None:intergenic 30.0%
TTAAGAACATTAACCAAGTG+TGG + chr5_3:11304322-11304341 Msa0798560:CDS 30.0%
CTGAAAATGTTTGGATATCT+GGG - chr5_3:11304402-11304421 None:intergenic 30.0%
! ATGCAGTATTTTTCACAACT+TGG + chr5_3:11304427-11304446 Msa0798560:CDS 30.0%
AAATCACAGTTTAAGGAACT+TGG - chr5_3:11304901-11304920 None:intergenic 30.0%
!!! AAACTGTGATTTATTTTGGG+AGG + chr5_3:11304909-11304928 Msa0798560:intron 30.0%
!!! AACTGTGATTTATTTTGGGA+GGG + chr5_3:11304910-11304929 Msa0798560:intron 30.0%
! TACTGCACCTTAAAACTTTT+TGG - chr5_3:11304940-11304959 None:intergenic 30.0%
TTTGAGAATGTATTATTGGC+AGG + chr5_3:11304971-11304990 Msa0798560:intron 30.0%
TCATATAATGAATGGACCTT+TGG + chr5_3:11305088-11305107 Msa0798560:intron 30.0%
!!! GAGTTCCTCTTTTTTTTTGT+TGG + chr5_3:11305269-11305288 Msa0798560:intron 30.0%
TGAATATTAATCCCTCGAAT+AGG + chr5_3:11305320-11305339 Msa0798560:intron 30.0%
GAATATTAATCCCTCGAATA+GGG + chr5_3:11305321-11305340 Msa0798560:intron 30.0%
!!! CTTTTTTTTAGGCATAGCAT+GGG - chr5_3:11305455-11305474 None:intergenic 30.0%
!!! ACTTTTTTTTAGGCATAGCA+TGG - chr5_3:11305456-11305475 None:intergenic 30.0%
TATTAGATGTCAAGCTTATG+TGG + chr5_3:11305597-11305616 Msa0798560:intron 30.0%
TGCCTTTACCAAAATGTTAA+GGG - chr5_3:11305842-11305861 None:intergenic 30.0%
ATGCCTTTACCAAAATGTTA+AGG - chr5_3:11305843-11305862 None:intergenic 30.0%
TGCGCAGAATATAATAAAGA+TGG - chr5_3:11305950-11305969 None:intergenic 30.0%
TTTCAAATCTTAGACACTGT+TGG - chr5_3:11305998-11306017 None:intergenic 30.0%
ACCAAACTTTGAACTAACAA+GGG - chr5_3:11306159-11306178 Msa0798570:three_prime_UTR 30.0%
! CTTTTTCTTCCATTTGAAGA+TGG - chr5_3:11306284-11306303 Msa0798570:three_prime_UTR 30.0%
!! CAAAATCTGGCTCTTATAAT+TGG + chr5_3:11306311-11306330 Msa0798560:CDS 30.0%
! CTTATAATTGGTATTAGCCT+AGG + chr5_3:11306323-11306342 Msa0798560:intron 30.0%
!! AAATGAAAAAAGCACTTCCT+AGG - chr5_3:11306343-11306362 Msa0798570:three_prime_UTR 30.0%
ACATCCATTTCATACATTGT+TGG - chr5_3:11306488-11306507 Msa0798570:three_prime_UTR 30.0%
GTTTACAAGGCTAATATAGA+TGG + chr5_3:11306560-11306579 Msa0798560:CDS 30.0%
AATCAAAAAAGATGCTTCTG+AGG + chr5_3:11306604-11306623 Msa0798560:CDS 30.0%
TTAGTTTCACAAGATTTCCA+TGG - chr5_3:11306655-11306674 Msa0798570:three_prime_UTR 30.0%
TGGAAATCTTGTGAAACTAA+TGG + chr5_3:11306655-11306674 Msa0798560:CDS 30.0%
GGAAATCTTGTGAAACTAAT+GGG + chr5_3:11306656-11306675 Msa0798560:CDS 30.0%
TTTGAAAACTTCAAATTCGG+TGG + chr5_3:11306766-11306785 Msa0798560:CDS 30.0%
! CAGTATTCGGTTCTAATTGA+AGG + chr5_3:11303581-11303600 Msa0798560:CDS 35.0%
! TTCGGTTCTAATTGAAGGTT+TGG + chr5_3:11303586-11303605 Msa0798560:CDS 35.0%
! GTTCTAATTGAAGGTTTGGT+TGG + chr5_3:11303590-11303609 Msa0798560:CDS 35.0%
! GTTAATGAGATGCAAGTTGA+TGG + chr5_3:11303644-11303663 Msa0798560:CDS 35.0%
TGGAATATTACCTAGTCGAA+CGG + chr5_3:11303664-11303683 Msa0798560:CDS 35.0%
GAAGGATGAAGGATTTCTTA+AGG + chr5_3:11303709-11303728 Msa0798560:CDS 35.0%
TGAAGGATTTCTTAAGGATG+TGG + chr5_3:11303715-11303734 Msa0798560:CDS 35.0%
GATGTGGATGAATTGTTTGA+AGG + chr5_3:11303731-11303750 Msa0798560:CDS 35.0%
ACACTCTTGATTCTTTCATC+CGG - chr5_3:11303764-11303783 None:intergenic 35.0%
! TTCTATTGATAGCAGTGATG+AGG + chr5_3:11303790-11303809 Msa0798560:CDS 35.0%
TCACAATGTGATCATGTAGA+TGG + chr5_3:11303851-11303870 Msa0798560:CDS 35.0%
CACAATGTGATCATGTAGAT+GGG + chr5_3:11303852-11303871 Msa0798560:CDS 35.0%
ATGGGATTCACTTAAAACCT+TGG + chr5_3:11303870-11303889 Msa0798560:CDS 35.0%
!!! ACTTAGAAGTTTTAGGTCAC+CGG + chr5_3:11304000-11304019 Msa0798560:CDS 35.0%
AAGAAATTCCACACAGTATC+CGG - chr5_3:11304022-11304041 None:intergenic 35.0%
CATCTTGAAGATCAGAATAG+AGG + chr5_3:11304147-11304166 Msa0798560:CDS 35.0%
CCTGAAAATGTTTGGATATC+TGG - chr5_3:11304403-11304422 None:intergenic 35.0%
! CCAGATATCCAAACATTTTC+AGG + chr5_3:11304400-11304419 Msa0798560:CDS 35.0%
GCATTAGACCTGAAAATGTT+TGG - chr5_3:11304411-11304430 None:intergenic 35.0%
CATTGAAAAGAGTTTCTGCA+CGG - chr5_3:11304464-11304483 None:intergenic 35.0%
ACTTGCAATAACCTTCTATC+AGG - chr5_3:11304531-11304550 None:intergenic 35.0%
TTGTGCTTAGATTTCATGCA+TGG - chr5_3:11304856-11304875 None:intergenic 35.0%
TCTAAGCACAAAGTAACAAG+CGG + chr5_3:11304865-11304884 Msa0798560:intron 35.0%
!!! ACTGTGATTTATTTTGGGAG+GGG + chr5_3:11304911-11304930 Msa0798560:intron 35.0%
GATCCTTCATTGTATTCACT+TGG + chr5_3:11305037-11305056 Msa0798560:intron 35.0%
TGACCAAGTGAATACAATGA+AGG - chr5_3:11305043-11305062 None:intergenic 35.0%
!! TTACTTCTAGCTTAACCAGT+GGG - chr5_3:11305425-11305444 None:intergenic 35.0%
!!! GACATGGGTCACTTTTTTTT+AGG - chr5_3:11305466-11305485 None:intergenic 35.0%
ACGATTGAATGAGATGACAT+GGG - chr5_3:11305481-11305500 None:intergenic 35.0%
AACGATTGAATGAGATGACA+TGG - chr5_3:11305482-11305501 None:intergenic 35.0%
TCATCTCATTCAATCGTTCT+TGG + chr5_3:11305484-11305503 Msa0798560:intron 35.0%
!!! AATCGTTCTTGGCTTGTTTT+CGG + chr5_3:11305495-11305514 Msa0798560:intron 35.0%
AAAAAGCTAGACTCAAGCAA+AGG + chr5_3:11305538-11305557 Msa0798560:intron 35.0%
! TTTCTGGTACATAGCTACTT+CGG - chr5_3:11305644-11305663 None:intergenic 35.0%
AGTAGCTATGTACCAGAAAT+AGG + chr5_3:11305645-11305664 Msa0798560:intron 35.0%
GTAGCTATGTACCAGAAATA+GGG + chr5_3:11305646-11305665 Msa0798560:intron 35.0%
! TTGTTTGCCCCTTAACATTT+TGG + chr5_3:11305831-11305850 Msa0798560:intron 35.0%
GCCTTTACCAAAATGTTAAG+GGG - chr5_3:11305841-11305860 None:intergenic 35.0%
GCATGATTTCATACTTGTCT+GGG + chr5_3:11305967-11305986 Msa0798560:intron 35.0%
TCTTATTACTTATGTGTGGC+AGG + chr5_3:11306118-11306137 Msa0798560:intron 35.0%
ACCCTTGTTAGTTCAAAGTT+TGG + chr5_3:11306155-11306174 Msa0798560:CDS 35.0%
CACCAAACTTTGAACTAACA+AGG - chr5_3:11306160-11306179 Msa0798570:three_prime_UTR 35.0%
TTGTCAGCTAACATTTCAAC+TGG - chr5_3:11306188-11306207 Msa0798570:three_prime_UTR 35.0%
!! GTTTTGGTAAACTTGTCACA+GGG - chr5_3:11306253-11306272 Msa0798570:three_prime_UTR 35.0%
!! AGTTTTGGTAAACTTGTCAC+AGG - chr5_3:11306254-11306273 Msa0798570:three_prime_UTR 35.0%
! GAAGATGGTTGATCAAGTTT+TGG - chr5_3:11306269-11306288 Msa0798570:three_prime_UTR 35.0%
CTTGATCAACCATCTTCAAA+TGG + chr5_3:11306272-11306291 Msa0798560:CDS 35.0%
AAAAAGCAGCAGTCAAAATC+TGG + chr5_3:11306298-11306317 Msa0798560:CDS 35.0%
AAGTAACTTATCTGCAGTCT+CGG - chr5_3:11306438-11306457 Msa0798570:three_prime_UTR 35.0%
! ACTGCAGATAAGTTACTTTG+AGG + chr5_3:11306440-11306459 Msa0798560:intron 35.0%
!! AAGTTACTTTGAGGTGTTTC+AGG + chr5_3:11306449-11306468 Msa0798560:intron 35.0%
CAAGCCAACAATGTATGAAA+TGG + chr5_3:11306481-11306500 Msa0798560:CDS 35.0%
GTATGAAATGGATGTGATCA+TGG + chr5_3:11306493-11306512 Msa0798560:CDS 35.0%
CTGAGTGAGAATTGTAAGAT+TGG + chr5_3:11306530-11306549 Msa0798560:CDS 35.0%
GATTGGTGAATCAGTTTACA+AGG + chr5_3:11306547-11306566 Msa0798560:CDS 35.0%
!! CAATGATGGAAACTGTTTTC+TGG + chr5_3:11306691-11306710 Msa0798560:CDS 35.0%
GTCTATGAGTATGCTGATAA+TGG + chr5_3:11306713-11306732 Msa0798560:CDS 35.0%
!! ATAATGGATCACTTGAAGAG+TGG + chr5_3:11306729-11306748 Msa0798560:CDS 35.0%
!! TTTGTTATTGCAGCAGGTGA+AGG + chr5_3:11303691-11303710 Msa0798560:CDS 40.0%
ATTGTTTGAAGGGATTTGCC+CGG + chr5_3:11303742-11303761 Msa0798560:CDS 40.0%
CACTCTTGATTCTTTCATCC+GGG - chr5_3:11303763-11303782 None:intergenic 40.0%
GATTCACTTAAAACCTTGGC+TGG + chr5_3:11303874-11303893 Msa0798560:CDS 40.0%
ATCAGGACTGCAATTCTGTA+AGG - chr5_3:11303921-11303940 None:intergenic 40.0%
TGTGTGGAATTTCTTCTGCT+GGG + chr5_3:11304027-11304046 Msa0798560:CDS 40.0%
GACTACCATTCAGAACCATA+AGG + chr5_3:11304176-11304195 Msa0798560:CDS 40.0%
GAACATTAACCAAGTGTGGA+AGG + chr5_3:11304326-11304345 Msa0798560:CDS 40.0%
! CGTGCAGAAACTCTTTTCAA+TGG + chr5_3:11304462-11304481 Msa0798560:CDS 40.0%
! TTTTCAATGGTCAGACAGAG+CGG + chr5_3:11304475-11304494 Msa0798560:CDS 40.0%
CTGTATAAGGTCCTGATAGA+AGG + chr5_3:11304517-11304536 Msa0798560:CDS 40.0%
!! TTCTGGTTCCATACCTGATT+CGG + chr5_3:11304597-11304616 Msa0798560:CDS 40.0%
CTTCACTAGCAACTCTTTGA+TGG - chr5_3:11304623-11304642 None:intergenic 40.0%
TTGCATTACCTGGTCATGTA+TGG + chr5_3:11304722-11304741 Msa0798560:CDS 40.0%
ATAGCCCAATGGATAACTCT+AGG - chr5_3:11304815-11304834 None:intergenic 40.0%
TCCATTGGGCTATATGATAG+AGG + chr5_3:11304822-11304841 Msa0798560:intron 40.0%
ACCTCTATCATATAGCCCAA+TGG - chr5_3:11304826-11304845 None:intergenic 40.0%
! GGGGTTGCCAAAAAGTTTTA+AGG + chr5_3:11304930-11304949 Msa0798560:intron 40.0%
ATTAATCCCTCGAATAGGGT+TGG + chr5_3:11305325-11305344 Msa0798560:intron 40.0%
TGTTATCCAACCCTATTCGA+GGG - chr5_3:11305334-11305353 None:intergenic 40.0%
ATGTTATCCAACCCTATTCG+AGG - chr5_3:11305335-11305354 None:intergenic 40.0%
!! CTTACTTCTAGCTTAACCAG+TGG - chr5_3:11305426-11305445 None:intergenic 40.0%
CAAAGGAGAGTAGGTAAGAA+GGG + chr5_3:11305555-11305574 Msa0798560:intron 40.0%
GTTGACACTTCCAGTTACAT+AGG - chr5_3:11305722-11305741 None:intergenic 40.0%
GGGCAAACAAGCAAAAGATA+TGG - chr5_3:11305821-11305840 None:intergenic 40.0%
!! GCCCCTTAACATTTTGGTAA+AGG + chr5_3:11305837-11305856 Msa0798560:intron 40.0%
!! GGTAAAGGCATCAAGTTAGA+TGG + chr5_3:11305852-11305871 Msa0798560:intron 40.0%
ATCGTGTATGGACACCAAAT+TGG + chr5_3:11305901-11305920 Msa0798560:intron 40.0%
TCGTGTATGGACACCAAATT+GGG + chr5_3:11305902-11305921 Msa0798560:intron 40.0%
CGCATGATTTCATACTTGTC+TGG + chr5_3:11305966-11305985 Msa0798560:intron 40.0%
TCACAGGGATCAAAACTGAA+CGG - chr5_3:11306238-11306257 Msa0798570:three_prime_UTR 40.0%
CAGTATACGTACACAAGTGA+TGG - chr5_3:11306377-11306396 Msa0798570:three_prime_UTR 40.0%
GAAATGGATGTGATCATGGA+AGG + chr5_3:11306497-11306516 Msa0798560:CDS 40.0%
GGAGCTAAAAATTCTGCAGA+AGG + chr5_3:11306625-11306644 Msa0798560:CDS 40.0%
ATTCTGCAGAAGGTAAACCA+TGG + chr5_3:11306635-11306654 Msa0798560:CDS 40.0%
ACTTGAAGAGTGGTTGTTCT+CGG + chr5_3:11306739-11306758 Msa0798560:CDS 40.0%
TCAGAGAATAACCATAGCCA+TGG + chr5_3:11306805-11306824 Msa0798560:CDS 40.0%
AATTGCAACATCCATGGCTA+TGG - chr5_3:11306819-11306838 Msa0798570:three_prime_UTR 40.0%
ATAGCCATGGATGTTGCAAT+TGG + chr5_3:11306818-11306837 Msa0798560:CDS 40.0%
AACAAACTCACCGTTCGACT+AGG - chr5_3:11303677-11303696 None:intergenic 45.0%
!! GGTGAGTTTGTTATTGCAGC+AGG + chr5_3:11303685-11303704 Msa0798560:CDS 45.0%
CAGTGATGAGGATGAGAATG+AGG + chr5_3:11303802-11303821 Msa0798560:CDS 45.0%
ACAGAATTGCAGTCCTGATG+AGG + chr5_3:11303922-11303941 Msa0798560:CDS 45.0%
!! TCTAGTGCTGATACCTCATC+AGG - chr5_3:11303938-11303957 None:intergenic 45.0%
! TGATGAGGTATCAGCACTAG+AGG + chr5_3:11303937-11303956 Msa0798560:CDS 45.0%
! GATGAGGTATCAGCACTAGA+GGG + chr5_3:11303938-11303957 Msa0798560:CDS 45.0%
CAAAGTTCGTGTGGACAACT+AGG + chr5_3:11303963-11303982 Msa0798560:CDS 45.0%
CTGTGTGGAATTTCTTCTGC+TGG + chr5_3:11304026-11304045 Msa0798560:CDS 45.0%
AAATGCTGATGCTGCTCTGA+AGG + chr5_3:11304228-11304247 Msa0798560:CDS 45.0%
ATCGGAATTCCTTCCACACT+TGG - chr5_3:11304338-11304357 None:intergenic 45.0%
ATCAAGCATGTCCAGGGTAT+CGG - chr5_3:11304356-11304375 None:intergenic 45.0%
CATCTCATCAAGCATGTCCA+GGG - chr5_3:11304362-11304381 None:intergenic 45.0%
TCATCTCATCAAGCATGTCC+AGG - chr5_3:11304363-11304382 None:intergenic 45.0%
ACCTTATACAGATACGCGTC+TGG - chr5_3:11304508-11304527 None:intergenic 45.0%
! TTTGATGGCCGAATCAGGTA+TGG - chr5_3:11304608-11304627 None:intergenic 45.0%
! AACTCTTTGATGGCCGAATC+AGG - chr5_3:11304613-11304632 None:intergenic 45.0%
ACATGACCAGGTAATGCAAG+TGG - chr5_3:11304721-11304740 None:intergenic 45.0%
GGTGCCTAGAGTTATCCATT+GGG + chr5_3:11304808-11304827 Msa0798560:intron 45.0%
CAGGAATTAGCTCGTTCTGA+TGG + chr5_3:11305009-11305028 Msa0798560:intron 45.0%
GCTCTCAACACATCAACCAA+AGG - chr5_3:11305107-11305126 None:intergenic 45.0%
!! TGCTGACTTCTGCAACTTGA+GGG + chr5_3:11305141-11305160 Msa0798560:intron 45.0%
AGACTCAAGCAAAGGAGAGT+AGG + chr5_3:11305546-11305565 Msa0798560:intron 45.0%
GCAAAGGAGAGTAGGTAAGA+AGG + chr5_3:11305554-11305573 Msa0798560:intron 45.0%
AGGGATCAAAACTGAACGGT+CGG - chr5_3:11306234-11306253 Msa0798570:three_prime_UTR 45.0%
GGTGTGTCTTCTGACAATGA+TGG + chr5_3:11306677-11306696 Msa0798560:CDS 45.0%
! ATTCGGTGGTTTCGCTTACA+TGG + chr5_3:11306780-11306799 Msa0798560:CDS 45.0%
CAGACCAATTGCAACATCCA+TGG - chr5_3:11306825-11306844 Msa0798570:three_prime_UTR 45.0%
TTGCAGCAGGTGAAGGATGA+AGG + chr5_3:11303698-11303717 Msa0798560:CDS 50.0%
TGAGGATGAGAATGAGGACG+AGG + chr5_3:11303808-11303827 Msa0798560:CDS 50.0%
GAGGATGAGAATGAGGACGA+GGG + chr5_3:11303809-11303828 Msa0798560:CDS 50.0%
TAAAACCTTGGCTGGATCCG+CGG + chr5_3:11303882-11303901 Msa0798560:CDS 50.0%
! TAGAGGGTGCAAAGTTCGTG+TGG + chr5_3:11303954-11303973 Msa0798560:CDS 50.0%
GTTCGTGTGGACAACTAGGT+TGG + chr5_3:11303967-11303986 Msa0798560:CDS 50.0%
TTAGGTCACCGGATACTGTG+TGG + chr5_3:11304011-11304030 Msa0798560:CDS 50.0%
TGGAAGGAATTCCGATACCC+TGG + chr5_3:11304342-11304361 Msa0798560:CDS 50.0%
GCCAGACGCGTATCTGTATA+AGG + chr5_3:11304504-11304523 Msa0798560:CDS 50.0%
CAAGTCAACAAGAGCTGCAC+TGG + chr5_3:11304546-11304565 Msa0798560:CDS 50.0%
AGTTGCTAGTGAAGAGCCTC+TGG + chr5_3:11304629-11304648 Msa0798560:CDS 50.0%
! GTGAAGAGCCTCTGGAAAGA+AGG + chr5_3:11304637-11304656 Msa0798560:CDS 50.0%
! GCCTCTGGAAAGAAGGTAGA+CGG + chr5_3:11304644-11304663 Msa0798560:CDS 50.0%
TCCGTCTACCTTCTTTCCAG+AGG - chr5_3:11304648-11304667 None:intergenic 50.0%
GAAAGAAGGTAGACGGAGAG+AGG + chr5_3:11304651-11304670 Msa0798560:CDS 50.0%
GAGCTGCGAGGAAGTAAATG+TGG + chr5_3:11304690-11304709 Msa0798560:CDS 50.0%
GTCCTTCCACTTGCATTACC+TGG + chr5_3:11304712-11304731 Msa0798560:CDS 50.0%
GACCAGGTAATGCAAGTGGA+AGG - chr5_3:11304717-11304736 None:intergenic 50.0%
CTGACAGTCCATACATGACC+AGG - chr5_3:11304733-11304752 None:intergenic 50.0%
GGGTGCCTAGAGTTATCCAT+TGG + chr5_3:11304807-11304826 Msa0798560:intron 50.0%
!! CAGGACATGAGTTGATGCTC+AGG + chr5_3:11304990-11305009 Msa0798560:intron 50.0%
CAAGTTGCAGAAGTCAGCAG+AGG - chr5_3:11305140-11305159 None:intergenic 50.0%
!! CTGCTGACTTCTGCAACTTG+AGG + chr5_3:11305140-11305159 Msa0798560:intron 50.0%
! GCTGACTTCTGCAACTTGAG+GGG + chr5_3:11305142-11305161 Msa0798560:intron 50.0%
GAATTCGAACTCGAACCCAC+TGG + chr5_3:11305407-11305426 Msa0798560:intron 50.0%
CATACACGATGTCAGCTAGC+TGG - chr5_3:11305891-11305910 None:intergenic 50.0%
CAGCTAGCTGACATCGTGTA+TGG + chr5_3:11305889-11305908 Msa0798560:intron 50.0%
GATGAGAATGAGGACGAGGG+TGG + chr5_3:11303812-11303831 Msa0798560:CDS 55.0%
! AAGGCACTAGCCAAAGACCG+CGG - chr5_3:11303902-11303921 None:intergenic 55.0%
ATGACCCTTCTAGCGCGACA+TGG + chr5_3:11304100-11304119 Msa0798560:CDS 55.0%
ACGTCCATGTCGCGCTAGAA+GGG - chr5_3:11304107-11304126 None:intergenic 55.0%
TACGTCCATGTCGCGCTAGA+AGG - chr5_3:11304108-11304127 None:intergenic 55.0%
!! CAACAAGAGCTGCACTGGCT+TGG + chr5_3:11304551-11304570 Msa0798560:CDS 55.0%
GCAGCTCTCTTCAACAGCTG+CGG - chr5_3:11304677-11304696 None:intergenic 55.0%
AGCTGTTGAAGAGAGCTGCG+AGG + chr5_3:11304678-11304697 Msa0798560:CDS 55.0%
AAAGACCGCGGATCCAGCCA+AGG - chr5_3:11303890-11303909 None:intergenic 60.0%
TTGGCTGGATCCGCGGTCTT+TGG + chr5_3:11303889-11303908 Msa0798560:CDS 60.0%
TGCTGGGTTGCTGATCGACC+TGG + chr5_3:11304043-11304062 Msa0798560:CDS 60.0%
CACGATGTCAGCTAGCTGGC+TGG - chr5_3:11305887-11305906 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 11303557 11306871 11303557 ID=Msa0798560;Name=Msa0798560
chr5_3 mRNA 11303557 11306871 11303557 ID=Msa0798560-mRNA-1;Parent=Msa0798560;Name=Msa0798560-mRNA-1;_AED=0.11;_eAED=0.12;_QI=0|0|0|1|1|1|3|0|602
chr5_3 exon 11303557 11304771 11303557 ID=Msa0798560-mRNA-1:exon:4686;Parent=Msa0798560-mRNA-1
chr5_3 exon 11306140 11306332 11306140 ID=Msa0798560-mRNA-1:exon:4687;Parent=Msa0798560-mRNA-1
chr5_3 exon 11306471 11306871 11306471 ID=Msa0798560-mRNA-1:exon:4688;Parent=Msa0798560-mRNA-1
chr5_3 CDS 11303557 11304771 11303557 ID=Msa0798560-mRNA-1:cds;Parent=Msa0798560-mRNA-1
chr5_3 CDS 11306140 11306332 11306140 ID=Msa0798560-mRNA-1:cds;Parent=Msa0798560-mRNA-1
chr5_3 CDS 11306471 11306871 11306471 ID=Msa0798560-mRNA-1:cds;Parent=Msa0798560-mRNA-1
Gene Sequence

>Msa0798560

ATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGGACGAGGGTGGAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATTCACTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGCAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTCGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTTAGGTCACCGGATACTGTGTGGAATTTCTTCTGCTGGGTTGCTGATCGACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGAACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACAATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGCAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCTGGTTCCATACCTGATTCGGCCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGAAGATCTCACAAAAGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGACAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGATCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTGTTTTCTGGTCTATGAGTATGCTGATAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAATTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCATAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>Msa0798560

MRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSSDEDENEDEGGNENEVSQCDHVDGIHLKPWLDPRSLASALQNCSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTVWNFFCWVADRPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFRTIRLIIDFYGISKNADAALKVFNNDRILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSIPDSAIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHVWTVSSEDLTKDNDNVTLVSSKFGASPVEMLADNNHNFTASTDRSVLIPVTSLPKLDQPSSNGRKSSSQNLALIIGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYADNGSLEEWLFSESLKTSNSVVSLTWSQRITIAMDVAIGLQMNILIQE*